0s autopkgtest [03:54:21]: starting date and time: 2025-11-14 03:54:21+0000 0s autopkgtest [03:54:21]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [03:54:21]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.pawqhiq1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade python-fabio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:2.3.4+ds-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-15.secgroup --name adt-resolute-s390x-python-fabio-20251114-035421-juju-7f2275-prod-proposed-migration-environment-2-1229cef7-b6c1-46e4-8acb-5a0422080efc --image adt/ubuntu-resolute-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-s390x-python-fabio-20251114-035421-juju-7f2275-prod-proposed-migration-environment-2-1229cef7-b6c1-46e4-8acb-5a0422080efc from image adt/ubuntu-resolute-s390x-server-20251113.img (UUID 92cb8c0c-0192-4ef0-af56-a7b160e515c3)... 47s autopkgtest [03:55:08]: testbed dpkg architecture: s390x 47s autopkgtest [03:55:08]: testbed apt version: 3.1.11 48s autopkgtest [03:55:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 48s autopkgtest [03:55:09]: testbed release detected to be: None 49s autopkgtest [03:55:10]: updating testbed package index (apt update) 49s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 49s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 49s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 49s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 49s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 49s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [787 kB] 50s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.4 kB] 50s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [83.2 kB] 50s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x Packages [139 kB] 50s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted s390x Packages [940 B] 50s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe s390x Packages [431 kB] 50s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse s390x Packages [10.1 kB] 50s Fetched 1572 kB in 1s (1329 kB/s) 51s Reading package lists... 52s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 52s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 52s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 52s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 53s Reading package lists... 53s Reading package lists... 53s Building dependency tree... 53s Reading state information... 53s Calculating upgrade... 53s The following packages will be upgraded: 53s 3cpio cron cron-daemon-common libcap2 libcap2-bin libpam-cap liburcu8t64 53s libxml2-16 lto-disabled-list 53s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 53s Need to get 1198 kB of archives. 53s After this operation, 28.7 kB disk space will be freed. 53s Get:1 http://ftpmaster.internal/ubuntu resolute/main s390x cron s390x 3.0pl1-200ubuntu1 [89.7 kB] 53s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x libcap2 s390x 1:2.75-10ubuntu1 [33.0 kB] 53s Get:3 http://ftpmaster.internal/ubuntu resolute/main s390x libpam-cap s390x 1:2.75-10ubuntu1 [12.9 kB] 53s Get:4 http://ftpmaster.internal/ubuntu resolute/main s390x libcap2-bin s390x 1:2.75-10ubuntu1 [33.9 kB] 53s Get:5 http://ftpmaster.internal/ubuntu resolute/main s390x libxml2-16 s390x 2.15.1+dfsg-0.3 [616 kB] 54s Get:6 http://ftpmaster.internal/ubuntu resolute/main s390x cron-daemon-common all 3.0pl1-200ubuntu1 [15.7 kB] 54s Get:7 http://ftpmaster.internal/ubuntu resolute/main s390x liburcu8t64 s390x 0.15.5-1 [66.5 kB] 54s Get:8 http://ftpmaster.internal/ubuntu resolute/main s390x 3cpio s390x 0.12.0-1ubuntu1 [319 kB] 54s Get:9 http://ftpmaster.internal/ubuntu resolute/main s390x lto-disabled-list all 72 [12.4 kB] 54s dpkg-preconfigure: unable to re-open stdin: No such file or directory 54s Fetched 1198 kB in 1s (1531 kB/s) 54s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61309 files and directories currently installed.) 54s Preparing to unpack .../cron_3.0pl1-200ubuntu1_s390x.deb ... 54s Unpacking cron (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 54s Preparing to unpack .../libcap2_1%3a2.75-10ubuntu1_s390x.deb ... 54s Unpacking libcap2:s390x (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 54s Setting up libcap2:s390x (1:2.75-10ubuntu1) ... 54s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61309 files and directories currently installed.) 54s Preparing to unpack .../0-libpam-cap_1%3a2.75-10ubuntu1_s390x.deb ... 54s Unpacking libpam-cap:s390x (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 54s Preparing to unpack .../1-libcap2-bin_1%3a2.75-10ubuntu1_s390x.deb ... 54s Unpacking libcap2-bin (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 54s Preparing to unpack .../2-libxml2-16_2.15.1+dfsg-0.3_s390x.deb ... 54s Unpacking libxml2-16:s390x (2.15.1+dfsg-0.3) over (2.14.5+dfsg-0.2build1) ... 54s Preparing to unpack .../3-cron-daemon-common_3.0pl1-200ubuntu1_all.deb ... 54s Unpacking cron-daemon-common (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 54s Preparing to unpack .../4-liburcu8t64_0.15.5-1_s390x.deb ... 54s Unpacking liburcu8t64:s390x (0.15.5-1) over (0.15.4-1) ... 54s Preparing to unpack .../5-3cpio_0.12.0-1ubuntu1_s390x.deb ... 54s Unpacking 3cpio (0.12.0-1ubuntu1) over (0.11.0-2ubuntu2) ... 55s Preparing to unpack .../6-lto-disabled-list_72_all.deb ... 55s Unpacking lto-disabled-list (72) over (71) ... 55s Setting up liburcu8t64:s390x (0.15.5-1) ... 55s Setting up 3cpio (0.12.0-1ubuntu1) ... 55s Setting up lto-disabled-list (72) ... 55s Setting up libxml2-16:s390x (2.15.1+dfsg-0.3) ... 55s Setting up libcap2-bin (1:2.75-10ubuntu1) ... 55s Setting up libpam-cap:s390x (1:2.75-10ubuntu1) ... 55s Setting up cron-daemon-common (3.0pl1-200ubuntu1) ... 55s Setting up cron (3.0pl1-200ubuntu1) ... 55s Processing triggers for libc-bin (2.42-2ubuntu2) ... 55s Processing triggers for man-db (2.13.1-1) ... 56s autopkgtest [03:55:17]: upgrading testbed (apt dist-upgrade and autopurge) 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 57s Calculating upgrade... 57s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 57s Solving dependencies... 57s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s autopkgtest [03:55:19]: rebooting testbed after setup commands that affected boot 73s autopkgtest [03:55:34]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP Mon Sep 22 08:56:47 UTC 2025 76s autopkgtest [03:55:37]: @@@@@@@@@@@@@@@@@@@@ apt-source python-fabio 78s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-fabio 2024.9.0-7 (dsc) [2920 B] 78s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-fabio 2024.9.0-7 (tar) [729 kB] 78s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-fabio 2024.9.0-7 (diff) [10.2 kB] 78s gpgv: Signature made Thu Mar 20 02:50:16 2025 UTC 78s gpgv: using RSA key B415360F591EB6DD73AFFB83D30DECD2599322FC 78s gpgv: Can't check signature: No public key 78s dpkg-source: warning: cannot verify inline signature for ./python-fabio_2024.9.0-7.dsc: no acceptable signature found 78s autopkgtest [03:55:39]: testing package python-fabio version 2024.9.0-7 79s autopkgtest [03:55:40]: build not needed 79s autopkgtest [03:55:40]: test command1: preparing testbed 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Solving dependencies... 80s The following NEW packages will be installed: 80s bitshuffle blt fontconfig fontconfig-config fonts-dejavu-core 80s fonts-dejavu-mono fonts-lyx libaec0 libavahi-client3 libavahi-common-data 80s libavahi-common3 libblas3 libcups2t64 libdeflate0 libdouble-conversion3 80s libegl-mesa0 libegl1 libevent-pthreads-2.1-7t64 libfabric1 libfontconfig1 80s libfreetype6 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglvnd0 80s libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 80s libhdf5-hl-310 libhdf5-openmpi-310 libhwloc-plugins libhwloc15 libice6 80s libimagequant0 libinput-bin libinput10 libjbig0 libjpeg-turbo8 libjpeg8 80s liblapack3 liblcms2-2 liblzf1 libmd4c0 libmtdev1t64 libopenjp2-7 80s libopenmpi40 libpciaccess0 libpcre2-16-0 libqhull-r8.0 libqt5core5t64 80s libqt5dbus5t64 libqt5designer5 libqt5gui5t64 libqt5help5 libqt5network5t64 80s libqt5printsupport5t64 libqt5sql5t64 libqt5test5t64 libqt5widgets5t64 80s libqt5xml5t64 libraqm0 librdmacm1t64 libsharpyuv0 libsm6 libsz2 libtcl8.6 80s libtiff6 libtk8.6 libvulkan1 libwacom-common libwacom9 libwayland-client0 80s libwebp7 libwebpdemux2 libwebpmux3 libx11-xcb1 libxcb-dri3-0 libxcb-glx0 80s libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 80s libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 80s libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 80s libxft2 libxkbcommon-x11-0 libxnvctrl0 libxrender1 libxshmfence1 libxslt1.1 80s libxss1 libxxf86vm1 libzopfli1 mesa-libgallium ocl-icd-libopencl1 80s python-matplotlib-data python3-all python3-brotli python3-contourpy 80s python3-cycler python3-decorator python3-fabio python3-fonttools python3-fs 80s python3-h5py python3-h5py-serial python3-hdf5plugin python3-kiwisolver 80s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy 80s python3-numpy-dev python3-pil python3-pil.imagetk python3-platformdirs 80s python3-pyqt5 python3-pyqt5.sip python3-scipy python3-sympy python3-tk 80s python3-ufolib2 python3-zopfli python3.13-tk python3.14-tk tk8.6-blt2.5 80s unicode-data x11-common 80s 0 upgraded, 142 newly installed, 0 to remove and 0 not upgraded. 80s Need to get 115 MB of archives. 80s After this operation, 485 MB of additional disk space will be used. 80s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x python3-numpy-dev s390x 1:2.3.4+ds-3ubuntu1 [146 kB] 81s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x libblas3 s390x 3.12.1-7 [254 kB] 81s Get:3 http://ftpmaster.internal/ubuntu resolute/main s390x libgfortran5 s390x 15.2.0-7ubuntu1 [629 kB] 81s Get:4 http://ftpmaster.internal/ubuntu resolute/main s390x liblapack3 s390x 3.12.1-7 [2983 kB] 81s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x python3-numpy s390x 1:2.3.4+ds-3ubuntu1 [5302 kB] 82s Get:6 http://ftpmaster.internal/ubuntu resolute/universe s390x libaec0 s390x 1.1.4-2 [26.1 kB] 82s Get:7 http://ftpmaster.internal/ubuntu resolute/universe s390x libsz2 s390x 1.1.4-2 [5628 B] 82s Get:8 http://ftpmaster.internal/ubuntu resolute/universe s390x libhdf5-310 s390x 1.14.5+repack-4 [1472 kB] 82s Get:9 http://ftpmaster.internal/ubuntu resolute/universe s390x libhdf5-hl-310 s390x 1.14.5+repack-4 [60.9 kB] 82s Get:10 http://ftpmaster.internal/ubuntu resolute/universe s390x liblzf1 s390x 3.6-4 [7020 B] 82s Get:11 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-h5py-serial s390x 3.13.0-1ubuntu1 [1182 kB] 82s Get:12 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-h5py all 3.13.0-1ubuntu1 [8230 B] 82s Get:13 http://ftpmaster.internal/ubuntu resolute/main s390x libgomp1 s390x 15.2.0-7ubuntu1 [154 kB] 82s Get:14 http://ftpmaster.internal/ubuntu resolute/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10build1 [8060 B] 82s Get:15 http://ftpmaster.internal/ubuntu resolute/main s390x librdmacm1t64 s390x 56.1-1ubuntu1 [73.6 kB] 82s Get:16 http://ftpmaster.internal/ubuntu resolute/universe s390x libfabric1 s390x 2.1.0-1.1 [640 kB] 82s Get:17 http://ftpmaster.internal/ubuntu resolute/universe s390x libhwloc15 s390x 2.12.2-1 [175 kB] 82s Get:18 http://ftpmaster.internal/ubuntu resolute/main s390x libpciaccess0 s390x 0.18.1-1ubuntu2 [19.1 kB] 82s Get:19 http://ftpmaster.internal/ubuntu resolute/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 82s Get:20 http://ftpmaster.internal/ubuntu resolute/main s390x ocl-icd-libopencl1 s390x 2.3.4-1 [44.4 kB] 82s Get:21 http://ftpmaster.internal/ubuntu resolute/universe s390x libhwloc-plugins s390x 2.12.2-1 [15.9 kB] 82s Get:22 http://ftpmaster.internal/ubuntu resolute/universe s390x libopenmpi40 s390x 5.0.8-8ubuntu1 [2907 kB] 83s Get:23 http://ftpmaster.internal/ubuntu resolute/universe s390x libhdf5-openmpi-310 s390x 1.14.5+repack-4 [1535 kB] 83s Get:24 http://ftpmaster.internal/ubuntu resolute/universe s390x bitshuffle s390x 0.5.2-1build2 [152 kB] 83s Get:25 http://ftpmaster.internal/ubuntu resolute/main s390x libtcl8.6 s390x 8.6.17+dfsg-1 [1034 kB] 83s Get:26 http://ftpmaster.internal/ubuntu resolute/main s390x libfreetype6 s390x 2.13.3+dfsg-1build1 [430 kB] 83s Get:27 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 83s Get:28 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 83s Get:29 http://ftpmaster.internal/ubuntu resolute/main s390x fontconfig-config s390x 2.15.0-2.3ubuntu1 [38.1 kB] 83s Get:30 http://ftpmaster.internal/ubuntu resolute/main s390x libfontconfig1 s390x 2.15.0-2.3ubuntu1 [149 kB] 83s Get:31 http://ftpmaster.internal/ubuntu resolute/main s390x libxrender1 s390x 1:0.9.12-1 [20.9 kB] 83s Get:32 http://ftpmaster.internal/ubuntu resolute/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 83s Get:33 http://ftpmaster.internal/ubuntu resolute/main s390x x11-common all 1:7.7+24ubuntu1 [22.4 kB] 83s Get:34 http://ftpmaster.internal/ubuntu resolute/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 83s Get:35 http://ftpmaster.internal/ubuntu resolute/main s390x libtk8.6 s390x 8.6.17-1 [828 kB] 83s Get:36 http://ftpmaster.internal/ubuntu resolute/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-8 [657 kB] 83s Get:37 http://ftpmaster.internal/ubuntu resolute/main s390x blt s390x 2.5.3+dfsg-8 [4826 B] 83s Get:38 http://ftpmaster.internal/ubuntu resolute/main s390x fontconfig s390x 2.15.0-2.3ubuntu1 [191 kB] 83s Get:39 http://ftpmaster.internal/ubuntu resolute/universe s390x fonts-lyx all 2.4.4-2 [171 kB] 83s Get:40 http://ftpmaster.internal/ubuntu resolute/main s390x libavahi-common-data s390x 0.8-16ubuntu3 [31.1 kB] 83s Get:41 http://ftpmaster.internal/ubuntu resolute/main s390x libavahi-common3 s390x 0.8-16ubuntu3 [23.3 kB] 83s Get:42 http://ftpmaster.internal/ubuntu resolute/main s390x libavahi-client3 s390x 0.8-16ubuntu3 [26.2 kB] 83s Get:43 http://ftpmaster.internal/ubuntu resolute/main s390x libcups2t64 s390x 2.4.12-0ubuntu3 [280 kB] 83s Get:44 http://ftpmaster.internal/ubuntu resolute/main s390x libdeflate0 s390x 1.23-2 [46.0 kB] 83s Get:45 http://ftpmaster.internal/ubuntu resolute/universe s390x libdouble-conversion3 s390x 3.3.1-2 [43.5 kB] 83s Get:46 http://ftpmaster.internal/ubuntu resolute/main s390x libx11-xcb1 s390x 2:1.8.12-1build1 [7972 B] 83s Get:47 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-dri3-0 s390x 1.17.0-2build1 [7688 B] 83s Get:48 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-present0 s390x 1.17.0-2build1 [6346 B] 83s Get:49 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-randr0 s390x 1.17.0-2build1 [19.0 kB] 83s Get:50 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-sync1 s390x 1.17.0-2build1 [9530 B] 83s Get:51 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-xfixes0 s390x 1.17.0-2build1 [10.6 kB] 83s Get:52 http://ftpmaster.internal/ubuntu resolute/main s390x libxshmfence1 s390x 1.3.3-1 [5202 B] 83s Get:53 http://ftpmaster.internal/ubuntu resolute/main s390x mesa-libgallium s390x 25.2.6-1ubuntu1 [8345 kB] 84s Get:54 http://ftpmaster.internal/ubuntu resolute/main s390x libgbm1 s390x 25.2.6-1ubuntu1 [34.7 kB] 84s Get:55 http://ftpmaster.internal/ubuntu resolute/main s390x libwayland-client0 s390x 1.24.0-2 [29.0 kB] 84s Get:56 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-shm0 s390x 1.17.0-2build1 [5916 B] 84s Get:57 http://ftpmaster.internal/ubuntu resolute/main s390x libegl-mesa0 s390x 25.2.6-1ubuntu1 [118 kB] 84s Get:58 http://ftpmaster.internal/ubuntu resolute/main s390x libvulkan1 s390x 1.4.328.1-1 [155 kB] 84s Get:59 http://ftpmaster.internal/ubuntu resolute/main s390x libgl1-mesa-dri s390x 25.2.6-1ubuntu1 [36.1 kB] 84s Get:60 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-glx0 s390x 1.17.0-2build1 [25.6 kB] 84s Get:61 http://ftpmaster.internal/ubuntu resolute/main s390x libxxf86vm1 s390x 1:1.1.4-2 [10.6 kB] 84s Get:62 http://ftpmaster.internal/ubuntu resolute/main s390x libglx-mesa0 s390x 25.2.6-1ubuntu1 [114 kB] 84s Get:63 http://ftpmaster.internal/ubuntu resolute/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 84s Get:64 http://ftpmaster.internal/ubuntu resolute/main s390x libharfbuzz0b s390x 12.1.0-1 [576 kB] 84s Get:65 http://ftpmaster.internal/ubuntu resolute/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 84s Get:66 http://ftpmaster.internal/ubuntu resolute/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 84s Get:67 http://ftpmaster.internal/ubuntu resolute/main s390x libwacom-common all 2.16.1-1 [113 kB] 84s Get:68 http://ftpmaster.internal/ubuntu resolute/main s390x libwacom9 s390x 2.16.1-1 [28.3 kB] 84s Get:69 http://ftpmaster.internal/ubuntu resolute/main s390x libinput-bin s390x 1.28.1-1ubuntu2 [24.1 kB] 84s Get:70 http://ftpmaster.internal/ubuntu resolute/main s390x libmtdev1t64 s390x 1.1.7-1 [15.6 kB] 84s Get:71 http://ftpmaster.internal/ubuntu resolute/main s390x libinput10 s390x 1.28.1-1ubuntu2 [142 kB] 84s Get:72 http://ftpmaster.internal/ubuntu resolute/main s390x libjpeg-turbo8 s390x 2.1.5-4ubuntu2 [147 kB] 84s Get:73 http://ftpmaster.internal/ubuntu resolute/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 84s Get:74 http://ftpmaster.internal/ubuntu resolute/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 84s Get:75 http://ftpmaster.internal/ubuntu resolute/universe s390x libmd4c0 s390x 0.5.2-2 [47.7 kB] 84s Get:76 http://ftpmaster.internal/ubuntu resolute/main s390x libpcre2-16-0 s390x 10.46-1 [260 kB] 84s Get:77 http://ftpmaster.internal/ubuntu resolute/universe s390x libqhull-r8.0 s390x 2020.2-7 [199 kB] 84s Get:78 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5core5t64 s390x 5.15.17+dfsg-1ubuntu1 [2244 kB] 84s Get:79 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5dbus5t64 s390x 5.15.17+dfsg-1ubuntu1 [240 kB] 84s Get:80 http://ftpmaster.internal/ubuntu resolute/main s390x libglvnd0 s390x 1.7.0-1build2 [107 kB] 84s Get:81 http://ftpmaster.internal/ubuntu resolute/main s390x libegl1 s390x 1.7.0-1build2 [31.0 kB] 84s Get:82 http://ftpmaster.internal/ubuntu resolute/main s390x libglx0 s390x 1.7.0-1build2 [30.9 kB] 84s Get:83 http://ftpmaster.internal/ubuntu resolute/main s390x libgl1 s390x 1.7.0-1build2 [135 kB] 84s Get:84 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5network5t64 s390x 5.15.17+dfsg-1ubuntu1 [786 kB] 84s Get:85 http://ftpmaster.internal/ubuntu resolute/main s390x libsm6 s390x 2:1.2.6-1 [18.3 kB] 84s Get:86 http://ftpmaster.internal/ubuntu resolute/universe s390x libxcb-icccm4 s390x 0.4.2-1 [11.4 kB] 84s Get:87 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-util1 s390x 0.4.1-1 [10.7 kB] 84s Get:88 http://ftpmaster.internal/ubuntu resolute/universe s390x libxcb-image0 s390x 0.4.0-2build1 [12.0 kB] 84s Get:89 http://ftpmaster.internal/ubuntu resolute/universe s390x libxcb-keysyms1 s390x 0.4.1-1 [8908 B] 84s Get:90 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-render0 s390x 1.17.0-2build1 [16.9 kB] 84s Get:91 http://ftpmaster.internal/ubuntu resolute/universe s390x libxcb-render-util0 s390x 0.3.10-1 [10.3 kB] 84s Get:92 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-shape0 s390x 1.17.0-2build1 [6306 B] 84s Get:93 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-xinerama0 s390x 1.17.0-2build1 [5516 B] 84s Get:94 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-xinput0 s390x 1.17.0-2build1 [34.8 kB] 84s Get:95 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-xkb1 s390x 1.17.0-2build1 [34.1 kB] 84s Get:96 http://ftpmaster.internal/ubuntu resolute/main s390x libxkbcommon-x11-0 s390x 1.12.3-1 [15.2 kB] 84s Get:97 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5gui5t64 s390x 5.15.17+dfsg-1ubuntu1 [4192 kB] 84s Get:98 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5widgets5t64 s390x 5.15.17+dfsg-1ubuntu1 [2715 kB] 84s Get:99 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5xml5t64 s390x 5.15.17+dfsg-1ubuntu1 [128 kB] 84s Get:100 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5designer5 s390x 5.15.17-3 [2897 kB] 84s Get:101 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5sql5t64 s390x 5.15.17+dfsg-1ubuntu1 [129 kB] 84s Get:102 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5help5 s390x 5.15.17-3 [172 kB] 85s Get:103 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5printsupport5t64 s390x 5.15.17+dfsg-1ubuntu1 [218 kB] 85s Get:104 http://ftpmaster.internal/ubuntu resolute/universe s390x libqt5test5t64 s390x 5.15.17+dfsg-1ubuntu1 [155 kB] 85s Get:105 http://ftpmaster.internal/ubuntu resolute/main s390x libraqm0 s390x 0.10.3-1 [15.6 kB] 85s Get:106 http://ftpmaster.internal/ubuntu resolute/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 85s Get:107 http://ftpmaster.internal/ubuntu resolute/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 85s Get:108 http://ftpmaster.internal/ubuntu resolute/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 85s Get:109 http://ftpmaster.internal/ubuntu resolute/main s390x libtiff6 s390x 4.7.0-3ubuntu3 [222 kB] 85s Get:110 http://ftpmaster.internal/ubuntu resolute/main s390x libwebpdemux2 s390x 1.5.0-0.1 [12.6 kB] 85s Get:111 http://ftpmaster.internal/ubuntu resolute/main s390x libwebpmux3 s390x 1.5.0-0.1 [25.8 kB] 85s Get:112 http://ftpmaster.internal/ubuntu resolute/main s390x libxslt1.1 s390x 1.1.43-0.3 [163 kB] 85s Get:113 http://ftpmaster.internal/ubuntu resolute/universe s390x libzopfli1 s390x 1.0.3-3 [124 kB] 85s Get:114 http://ftpmaster.internal/ubuntu resolute/universe s390x python-matplotlib-data all 3.10.7+dfsg1-1 [2930 kB] 86s Get:115 http://ftpmaster.internal/ubuntu resolute/main s390x python3-all s390x 3.13.7-1 [886 B] 86s Get:116 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-brotli s390x 1.1.0-2build6 [386 kB] 86s Get:117 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-contourpy s390x 1.3.1-2 [266 kB] 86s Get:118 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-cycler all 0.12.1-2 [9850 B] 86s Get:119 http://ftpmaster.internal/ubuntu resolute/main s390x python3-decorator all 5.2.1-2 [28.1 kB] 86s Get:120 http://ftpmaster.internal/ubuntu resolute/main s390x python3-platformdirs all 4.3.7-1 [16.9 kB] 86s Get:121 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-fs all 2.4.16-8ubuntu1 [91.1 kB] 86s Get:122 http://ftpmaster.internal/ubuntu resolute/main s390x python3-lxml s390x 6.0.2-1 [2478 kB] 87s Get:123 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-lz4 s390x 4.4.4+dfsg-3 [27.4 kB] 87s Get:124 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-scipy s390x 1.15.3-1ubuntu1 [21.3 MB] 88s Get:125 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-mpmath all 1.3.0-2 [423 kB] 88s Get:126 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sympy all 1.14.0-2 [4306 kB] 88s Get:127 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-ufolib2 all 0.17.1+dfsg1-1 [33.5 kB] 88s Get:128 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-zopfli s390x 0.4.0-1 [11.2 kB] 88s Get:129 http://ftpmaster.internal/ubuntu resolute/universe s390x unicode-data all 16.0.0-1 [9513 kB] 89s Get:130 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-fonttools s390x 4.57.0-2build1 [1773 kB] 89s Get:131 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-hdf5plugin all 5.1.0-1 [23.3 kB] 89s Get:132 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-kiwisolver s390x 1.4.10~rc0-1 [65.0 kB] 89s Get:133 http://ftpmaster.internal/ubuntu resolute/main s390x libopenjp2-7 s390x 2.5.3-2.1 [207 kB] 89s Get:134 http://ftpmaster.internal/ubuntu resolute/main s390x python3-pil s390x 11.3.0-1ubuntu2 [542 kB] 89s Get:135 http://ftpmaster.internal/ubuntu resolute/main s390x python3.14-tk s390x 3.14.0-4 [109 kB] 89s Get:136 http://ftpmaster.internal/ubuntu resolute/main s390x python3.13-tk s390x 3.13.9-1 [109 kB] 89s Get:137 http://ftpmaster.internal/ubuntu resolute/main s390x python3-tk s390x 3.13.9-1 [8948 B] 89s Get:138 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pil.imagetk s390x 11.3.0-1ubuntu2 [9922 B] 89s Get:139 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-matplotlib s390x 3.10.7+dfsg1-1 [17.2 MB] 89s Get:140 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pyqt5.sip s390x 12.17.1-1 [88.2 kB] 89s Get:141 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pyqt5 s390x 5.15.11+dfsg-3 [2871 kB] 89s Get:142 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-fabio s390x 2024.9.0-7 [652 kB] 90s Fetched 115 MB in 9s (12.4 MB/s) 90s Selecting previously unselected package python3-numpy-dev:s390x. 90s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61308 files and directories currently installed.) 90s Preparing to unpack .../000-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_s390x.deb ... 90s Unpacking python3-numpy-dev:s390x (1:2.3.4+ds-3ubuntu1) ... 90s Selecting previously unselected package libblas3:s390x. 90s Preparing to unpack .../001-libblas3_3.12.1-7_s390x.deb ... 90s Unpacking libblas3:s390x (3.12.1-7) ... 90s Selecting previously unselected package libgfortran5:s390x. 90s Preparing to unpack .../002-libgfortran5_15.2.0-7ubuntu1_s390x.deb ... 90s Unpacking libgfortran5:s390x (15.2.0-7ubuntu1) ... 90s Selecting previously unselected package liblapack3:s390x. 90s Preparing to unpack .../003-liblapack3_3.12.1-7_s390x.deb ... 90s Unpacking liblapack3:s390x (3.12.1-7) ... 90s Selecting previously unselected package python3-numpy. 90s Preparing to unpack .../004-python3-numpy_1%3a2.3.4+ds-3ubuntu1_s390x.deb ... 90s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 90s Selecting previously unselected package libaec0:s390x. 90s Preparing to unpack .../005-libaec0_1.1.4-2_s390x.deb ... 90s Unpacking libaec0:s390x (1.1.4-2) ... 90s Selecting previously unselected package libsz2:s390x. 90s Preparing to unpack .../006-libsz2_1.1.4-2_s390x.deb ... 90s Unpacking libsz2:s390x (1.1.4-2) ... 90s Selecting previously unselected package libhdf5-310:s390x. 90s Preparing to unpack .../007-libhdf5-310_1.14.5+repack-4_s390x.deb ... 90s Unpacking libhdf5-310:s390x (1.14.5+repack-4) ... 90s Selecting previously unselected package libhdf5-hl-310:s390x. 90s Preparing to unpack .../008-libhdf5-hl-310_1.14.5+repack-4_s390x.deb ... 90s Unpacking libhdf5-hl-310:s390x (1.14.5+repack-4) ... 90s Selecting previously unselected package liblzf1:s390x. 90s Preparing to unpack .../009-liblzf1_3.6-4_s390x.deb ... 90s Unpacking liblzf1:s390x (3.6-4) ... 90s Selecting previously unselected package python3-h5py-serial. 90s Preparing to unpack .../010-python3-h5py-serial_3.13.0-1ubuntu1_s390x.deb ... 90s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 90s Selecting previously unselected package python3-h5py. 90s Preparing to unpack .../011-python3-h5py_3.13.0-1ubuntu1_all.deb ... 90s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 90s Selecting previously unselected package libgomp1:s390x. 90s Preparing to unpack .../012-libgomp1_15.2.0-7ubuntu1_s390x.deb ... 90s Unpacking libgomp1:s390x (15.2.0-7ubuntu1) ... 90s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 90s Preparing to unpack .../013-libevent-pthreads-2.1-7t64_2.1.12-stable-10build1_s390x.deb ... 90s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10build1) ... 91s Selecting previously unselected package librdmacm1t64:s390x. 91s Preparing to unpack .../014-librdmacm1t64_56.1-1ubuntu1_s390x.deb ... 91s Unpacking librdmacm1t64:s390x (56.1-1ubuntu1) ... 91s Selecting previously unselected package libfabric1:s390x. 91s Preparing to unpack .../015-libfabric1_2.1.0-1.1_s390x.deb ... 91s Unpacking libfabric1:s390x (2.1.0-1.1) ... 91s Selecting previously unselected package libhwloc15:s390x. 91s Preparing to unpack .../016-libhwloc15_2.12.2-1_s390x.deb ... 91s Unpacking libhwloc15:s390x (2.12.2-1) ... 91s Selecting previously unselected package libpciaccess0:s390x. 91s Preparing to unpack .../017-libpciaccess0_0.18.1-1ubuntu2_s390x.deb ... 91s Unpacking libpciaccess0:s390x (0.18.1-1ubuntu2) ... 91s Selecting previously unselected package libxnvctrl0:s390x. 91s Preparing to unpack .../018-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 91s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 91s Selecting previously unselected package ocl-icd-libopencl1:s390x. 91s Preparing to unpack .../019-ocl-icd-libopencl1_2.3.4-1_s390x.deb ... 91s Unpacking ocl-icd-libopencl1:s390x (2.3.4-1) ... 91s Selecting previously unselected package libhwloc-plugins:s390x. 91s Preparing to unpack .../020-libhwloc-plugins_2.12.2-1_s390x.deb ... 91s Unpacking libhwloc-plugins:s390x (2.12.2-1) ... 91s Selecting previously unselected package libopenmpi40:s390x. 91s Preparing to unpack .../021-libopenmpi40_5.0.8-8ubuntu1_s390x.deb ... 91s Unpacking libopenmpi40:s390x (5.0.8-8ubuntu1) ... 91s Selecting previously unselected package libhdf5-openmpi-310:s390x. 91s Preparing to unpack .../022-libhdf5-openmpi-310_1.14.5+repack-4_s390x.deb ... 91s Unpacking libhdf5-openmpi-310:s390x (1.14.5+repack-4) ... 91s Selecting previously unselected package bitshuffle. 91s Preparing to unpack .../023-bitshuffle_0.5.2-1build2_s390x.deb ... 91s Unpacking bitshuffle (0.5.2-1build2) ... 91s Selecting previously unselected package libtcl8.6:s390x. 91s Preparing to unpack .../024-libtcl8.6_8.6.17+dfsg-1_s390x.deb ... 91s Unpacking libtcl8.6:s390x (8.6.17+dfsg-1) ... 91s Selecting previously unselected package libfreetype6:s390x. 91s Preparing to unpack .../025-libfreetype6_2.13.3+dfsg-1build1_s390x.deb ... 91s Unpacking libfreetype6:s390x (2.13.3+dfsg-1build1) ... 91s Selecting previously unselected package fonts-dejavu-mono. 91s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ... 91s Unpacking fonts-dejavu-mono (2.37-8) ... 91s Selecting previously unselected package fonts-dejavu-core. 91s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ... 91s Unpacking fonts-dejavu-core (2.37-8) ... 91s Selecting previously unselected package fontconfig-config. 91s Preparing to unpack .../028-fontconfig-config_2.15.0-2.3ubuntu1_s390x.deb ... 91s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 91s Selecting previously unselected package libfontconfig1:s390x. 91s Preparing to unpack .../029-libfontconfig1_2.15.0-2.3ubuntu1_s390x.deb ... 91s Unpacking libfontconfig1:s390x (2.15.0-2.3ubuntu1) ... 91s Selecting previously unselected package libxrender1:s390x. 91s Preparing to unpack .../030-libxrender1_1%3a0.9.12-1_s390x.deb ... 91s Unpacking libxrender1:s390x (1:0.9.12-1) ... 91s Selecting previously unselected package libxft2:s390x. 91s Preparing to unpack .../031-libxft2_2.3.6-1build1_s390x.deb ... 91s Unpacking libxft2:s390x (2.3.6-1build1) ... 91s Selecting previously unselected package x11-common. 91s Preparing to unpack .../032-x11-common_1%3a7.7+24ubuntu1_all.deb ... 91s Unpacking x11-common (1:7.7+24ubuntu1) ... 91s Selecting previously unselected package libxss1:s390x. 91s Preparing to unpack .../033-libxss1_1%3a1.2.3-1build3_s390x.deb ... 91s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 91s Selecting previously unselected package libtk8.6:s390x. 91s Preparing to unpack .../034-libtk8.6_8.6.17-1_s390x.deb ... 91s Unpacking libtk8.6:s390x (8.6.17-1) ... 91s Selecting previously unselected package tk8.6-blt2.5. 91s Preparing to unpack .../035-tk8.6-blt2.5_2.5.3+dfsg-8_s390x.deb ... 91s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 91s Selecting previously unselected package blt. 91s Preparing to unpack .../036-blt_2.5.3+dfsg-8_s390x.deb ... 91s Unpacking blt (2.5.3+dfsg-8) ... 91s Selecting previously unselected package fontconfig. 91s Preparing to unpack .../037-fontconfig_2.15.0-2.3ubuntu1_s390x.deb ... 91s Unpacking fontconfig (2.15.0-2.3ubuntu1) ... 91s Selecting previously unselected package fonts-lyx. 91s Preparing to unpack .../038-fonts-lyx_2.4.4-2_all.deb ... 91s Unpacking fonts-lyx (2.4.4-2) ... 91s Selecting previously unselected package libavahi-common-data:s390x. 91s Preparing to unpack .../039-libavahi-common-data_0.8-16ubuntu3_s390x.deb ... 91s Unpacking libavahi-common-data:s390x (0.8-16ubuntu3) ... 91s Selecting previously unselected package libavahi-common3:s390x. 91s Preparing to unpack .../040-libavahi-common3_0.8-16ubuntu3_s390x.deb ... 91s Unpacking libavahi-common3:s390x (0.8-16ubuntu3) ... 91s Selecting previously unselected package libavahi-client3:s390x. 91s Preparing to unpack .../041-libavahi-client3_0.8-16ubuntu3_s390x.deb ... 91s Unpacking libavahi-client3:s390x (0.8-16ubuntu3) ... 91s Selecting previously unselected package libcups2t64:s390x. 91s Preparing to unpack .../042-libcups2t64_2.4.12-0ubuntu3_s390x.deb ... 91s Unpacking libcups2t64:s390x (2.4.12-0ubuntu3) ... 91s Selecting previously unselected package libdeflate0:s390x. 91s Preparing to unpack .../043-libdeflate0_1.23-2_s390x.deb ... 91s Unpacking libdeflate0:s390x (1.23-2) ... 91s Selecting previously unselected package libdouble-conversion3:s390x. 91s Preparing to unpack .../044-libdouble-conversion3_3.3.1-2_s390x.deb ... 91s Unpacking libdouble-conversion3:s390x (3.3.1-2) ... 91s Selecting previously unselected package libx11-xcb1:s390x. 91s Preparing to unpack .../045-libx11-xcb1_2%3a1.8.12-1build1_s390x.deb ... 91s Unpacking libx11-xcb1:s390x (2:1.8.12-1build1) ... 91s Selecting previously unselected package libxcb-dri3-0:s390x. 91s Preparing to unpack .../046-libxcb-dri3-0_1.17.0-2build1_s390x.deb ... 91s Unpacking libxcb-dri3-0:s390x (1.17.0-2build1) ... 91s Selecting previously unselected package libxcb-present0:s390x. 91s Preparing to unpack .../047-libxcb-present0_1.17.0-2build1_s390x.deb ... 91s Unpacking libxcb-present0:s390x (1.17.0-2build1) ... 91s Selecting previously unselected package libxcb-randr0:s390x. 91s Preparing to unpack .../048-libxcb-randr0_1.17.0-2build1_s390x.deb ... 91s Unpacking libxcb-randr0:s390x (1.17.0-2build1) ... 91s Selecting previously unselected package libxcb-sync1:s390x. 91s Preparing to unpack .../049-libxcb-sync1_1.17.0-2build1_s390x.deb ... 91s Unpacking libxcb-sync1:s390x (1.17.0-2build1) ... 91s Selecting previously unselected package libxcb-xfixes0:s390x. 91s Preparing to unpack .../050-libxcb-xfixes0_1.17.0-2build1_s390x.deb ... 91s Unpacking libxcb-xfixes0:s390x (1.17.0-2build1) ... 91s Selecting previously unselected package libxshmfence1:s390x. 91s Preparing to unpack .../051-libxshmfence1_1.3.3-1_s390x.deb ... 91s Unpacking libxshmfence1:s390x (1.3.3-1) ... 91s Selecting previously unselected package mesa-libgallium:s390x. 91s Preparing to unpack .../052-mesa-libgallium_25.2.6-1ubuntu1_s390x.deb ... 91s Unpacking mesa-libgallium:s390x (25.2.6-1ubuntu1) ... 91s Selecting previously unselected package libgbm1:s390x. 91s Preparing to unpack .../053-libgbm1_25.2.6-1ubuntu1_s390x.deb ... 91s Unpacking libgbm1:s390x (25.2.6-1ubuntu1) ... 91s Selecting previously unselected package libwayland-client0:s390x. 91s Preparing to unpack .../054-libwayland-client0_1.24.0-2_s390x.deb ... 91s Unpacking libwayland-client0:s390x (1.24.0-2) ... 91s Selecting previously unselected package libxcb-shm0:s390x. 91s Preparing to unpack .../055-libxcb-shm0_1.17.0-2build1_s390x.deb ... 91s Unpacking libxcb-shm0:s390x (1.17.0-2build1) ... 91s Selecting previously unselected package libegl-mesa0:s390x. 91s Preparing to unpack .../056-libegl-mesa0_25.2.6-1ubuntu1_s390x.deb ... 91s Unpacking libegl-mesa0:s390x (25.2.6-1ubuntu1) ... 91s Selecting previously unselected package libvulkan1:s390x. 91s Preparing to unpack .../057-libvulkan1_1.4.328.1-1_s390x.deb ... 91s Unpacking libvulkan1:s390x (1.4.328.1-1) ... 91s Selecting previously unselected package libgl1-mesa-dri:s390x. 91s Preparing to unpack .../058-libgl1-mesa-dri_25.2.6-1ubuntu1_s390x.deb ... 91s Unpacking libgl1-mesa-dri:s390x (25.2.6-1ubuntu1) ... 91s Selecting previously unselected package libxcb-glx0:s390x. 91s Preparing to unpack .../059-libxcb-glx0_1.17.0-2build1_s390x.deb ... 91s Unpacking libxcb-glx0:s390x (1.17.0-2build1) ... 92s Selecting previously unselected package libxxf86vm1:s390x. 92s Preparing to unpack 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libimagequant0:s390x (2.18.0-1build1) ... 92s Selecting previously unselected package libwacom-common. 92s Preparing to unpack .../066-libwacom-common_2.16.1-1_all.deb ... 92s Unpacking libwacom-common (2.16.1-1) ... 92s Selecting previously unselected package libwacom9:s390x. 92s Preparing to unpack .../067-libwacom9_2.16.1-1_s390x.deb ... 92s Unpacking libwacom9:s390x (2.16.1-1) ... 92s Selecting previously unselected package libinput-bin. 92s Preparing to unpack .../068-libinput-bin_1.28.1-1ubuntu2_s390x.deb ... 92s Unpacking libinput-bin (1.28.1-1ubuntu2) ... 92s Selecting previously unselected package libmtdev1t64:s390x. 92s Preparing to unpack .../069-libmtdev1t64_1.1.7-1_s390x.deb ... 92s Unpacking libmtdev1t64:s390x (1.1.7-1) ... 92s Selecting previously unselected package libinput10:s390x. 92s Preparing to unpack .../070-libinput10_1.28.1-1ubuntu2_s390x.deb ... 92s Unpacking libinput10:s390x (1.28.1-1ubuntu2) ... 92s Selecting previously unselected package libjpeg-turbo8:s390x. 92s Preparing to unpack .../071-libjpeg-turbo8_2.1.5-4ubuntu2_s390x.deb ... 92s Unpacking libjpeg-turbo8:s390x (2.1.5-4ubuntu2) ... 92s Selecting previously unselected package libjpeg8:s390x. 92s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_s390x.deb ... 92s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 92s Selecting previously unselected package liblcms2-2:s390x. 92s Preparing to unpack .../073-liblcms2-2_2.16-2_s390x.deb ... 92s Unpacking liblcms2-2:s390x (2.16-2) ... 92s Selecting previously unselected package libmd4c0:s390x. 92s Preparing to unpack .../074-libmd4c0_0.5.2-2_s390x.deb ... 92s Unpacking libmd4c0:s390x (0.5.2-2) ... 92s Selecting previously unselected package libpcre2-16-0:s390x. 92s Preparing to unpack .../075-libpcre2-16-0_10.46-1_s390x.deb ... 92s Unpacking libpcre2-16-0:s390x (10.46-1) ... 92s Selecting previously unselected package libqhull-r8.0:s390x. 92s Preparing to unpack .../076-libqhull-r8.0_2020.2-7_s390x.deb ... 92s Unpacking libqhull-r8.0:s390x (2020.2-7) ... 92s Selecting previously unselected package libqt5core5t64:s390x. 92s Preparing to unpack .../077-libqt5core5t64_5.15.17+dfsg-1ubuntu1_s390x.deb ... 92s Unpacking libqt5core5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 92s Selecting previously unselected package libqt5dbus5t64:s390x. 92s Preparing to unpack .../078-libqt5dbus5t64_5.15.17+dfsg-1ubuntu1_s390x.deb ... 92s Unpacking libqt5dbus5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 92s Selecting previously unselected package libglvnd0:s390x. 92s Preparing to unpack .../079-libglvnd0_1.7.0-1build2_s390x.deb ... 92s Unpacking libglvnd0:s390x (1.7.0-1build2) ... 92s Selecting previously unselected package libegl1:s390x. 92s Preparing to unpack .../080-libegl1_1.7.0-1build2_s390x.deb ... 92s Unpacking libegl1:s390x (1.7.0-1build2) ... 92s Selecting previously unselected package libglx0:s390x. 92s Preparing to unpack .../081-libglx0_1.7.0-1build2_s390x.deb ... 92s Unpacking libglx0:s390x (1.7.0-1build2) ... 92s Selecting previously unselected package libgl1:s390x. 92s Preparing to unpack .../082-libgl1_1.7.0-1build2_s390x.deb ... 92s Unpacking libgl1:s390x (1.7.0-1build2) ... 92s Selecting previously unselected package libqt5network5t64:s390x. 92s Preparing to unpack .../083-libqt5network5t64_5.15.17+dfsg-1ubuntu1_s390x.deb ... 92s Unpacking libqt5network5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 92s Selecting previously unselected package libsm6:s390x. 92s Preparing to unpack .../084-libsm6_2%3a1.2.6-1_s390x.deb ... 92s Unpacking libsm6:s390x (2:1.2.6-1) ... 92s Selecting previously unselected package libxcb-icccm4:s390x. 92s Preparing to unpack .../085-libxcb-icccm4_0.4.2-1_s390x.deb ... 92s Unpacking libxcb-icccm4:s390x (0.4.2-1) ... 92s Selecting previously unselected package libxcb-util1:s390x. 92s Preparing to unpack .../086-libxcb-util1_0.4.1-1_s390x.deb ... 92s Unpacking libxcb-util1:s390x (0.4.1-1) ... 92s Selecting previously unselected package libxcb-image0:s390x. 92s Preparing to unpack .../087-libxcb-image0_0.4.0-2build1_s390x.deb ... 92s Unpacking libxcb-image0:s390x (0.4.0-2build1) ... 92s Selecting previously unselected package libxcb-keysyms1:s390x. 92s Preparing to unpack .../088-libxcb-keysyms1_0.4.1-1_s390x.deb ... 92s Unpacking libxcb-keysyms1:s390x (0.4.1-1) ... 92s Selecting previously unselected package libxcb-render0:s390x. 92s Preparing to unpack .../089-libxcb-render0_1.17.0-2build1_s390x.deb ... 92s Unpacking libxcb-render0:s390x (1.17.0-2build1) ... 92s Selecting previously unselected package libxcb-render-util0:s390x. 92s Preparing to unpack .../090-libxcb-render-util0_0.3.10-1_s390x.deb ... 92s Unpacking libxcb-render-util0:s390x (0.3.10-1) ... 92s Selecting previously unselected package libxcb-shape0:s390x. 92s Preparing to unpack .../091-libxcb-shape0_1.17.0-2build1_s390x.deb ... 92s Unpacking libxcb-shape0:s390x (1.17.0-2build1) ... 92s Selecting previously unselected package libxcb-xinerama0:s390x. 92s Preparing to unpack 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unselected package python-matplotlib-data. 92s Preparing to unpack .../113-python-matplotlib-data_3.10.7+dfsg1-1_all.deb ... 92s Unpacking python-matplotlib-data (3.10.7+dfsg1-1) ... 92s Selecting previously unselected package python3-all. 92s Preparing to unpack .../114-python3-all_3.13.7-1_s390x.deb ... 92s Unpacking python3-all (3.13.7-1) ... 92s Selecting previously unselected package python3-brotli. 92s Preparing to unpack .../115-python3-brotli_1.1.0-2build6_s390x.deb ... 92s Unpacking python3-brotli (1.1.0-2build6) ... 92s Selecting previously unselected package python3-contourpy. 92s Preparing to unpack .../116-python3-contourpy_1.3.1-2_s390x.deb ... 92s Unpacking python3-contourpy (1.3.1-2) ... 92s Selecting previously unselected package python3-cycler. 92s Preparing to unpack .../117-python3-cycler_0.12.1-2_all.deb ... 92s Unpacking python3-cycler (0.12.1-2) ... 92s Selecting previously unselected package python3-decorator. 92s Preparing to unpack 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previously unselected package python3.13-tk. 94s Preparing to unpack .../135-python3.13-tk_3.13.9-1_s390x.deb ... 94s Unpacking python3.13-tk (3.13.9-1) ... 94s Selecting previously unselected package python3-tk:s390x. 94s Preparing to unpack .../136-python3-tk_3.13.9-1_s390x.deb ... 94s Unpacking python3-tk:s390x (3.13.9-1) ... 94s Selecting previously unselected package python3-pil.imagetk:s390x. 94s Preparing to unpack .../137-python3-pil.imagetk_11.3.0-1ubuntu2_s390x.deb ... 94s Unpacking python3-pil.imagetk:s390x (11.3.0-1ubuntu2) ... 94s Selecting previously unselected package python3-matplotlib. 94s Preparing to unpack .../138-python3-matplotlib_3.10.7+dfsg1-1_s390x.deb ... 94s Unpacking python3-matplotlib (3.10.7+dfsg1-1) ... 94s Selecting previously unselected package python3-pyqt5.sip. 94s Preparing to unpack .../139-python3-pyqt5.sip_12.17.1-1_s390x.deb ... 94s Unpacking python3-pyqt5.sip (12.17.1-1) ... 94s Selecting previously unselected package python3-pyqt5. 94s Preparing to unpack .../140-python3-pyqt5_5.15.11+dfsg-3_s390x.deb ... 94s Unpacking python3-pyqt5 (5.15.11+dfsg-3) ... 94s Selecting previously unselected package python3-fabio. 94s Preparing to unpack .../141-python3-fabio_2024.9.0-7_s390x.deb ... 94s Unpacking python3-fabio (2024.9.0-7) ... 94s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 94s Setting up libxcb-dri3-0:s390x (1.17.0-2build1) ... 94s Setting up liblcms2-2:s390x (2.16-2) ... 94s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 94s Setting up libx11-xcb1:s390x (2:1.8.12-1build1) ... 94s Setting up libpciaccess0:s390x (0.18.1-1ubuntu2) ... 94s Setting up libdouble-conversion3:s390x (3.3.1-2) ... 94s Setting up libxcb-xfixes0:s390x (1.17.0-2build1) ... 94s Setting up libxcb-xinput0:s390x (1.17.0-2build1) ... 94s Setting up libxrender1:s390x (1:0.9.12-1) ... 94s Setting up python3-lz4 (4.4.4+dfsg-3) ... 94s Setting up libxcb-render0:s390x (1.17.0-2build1) ... 94s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10build1) ... 94s Setting up libglvnd0:s390x (1.7.0-1build2) ... 94s Setting up fonts-lyx (2.4.4-2) ... 94s Setting up libxcb-glx0:s390x (1.17.0-2build1) ... 94s Setting up libxcb-keysyms1:s390x (0.4.1-1) ... 94s Setting up libxcb-shape0:s390x (1.17.0-2build1) ... 94s Setting up x11-common (1:7.7+24ubuntu1) ... 95s Setting up libdeflate0:s390x (1.23-2) ... 95s Setting up libqhull-r8.0:s390x (2020.2-7) ... 95s Setting up libxcb-render-util0:s390x (0.3.10-1) ... 95s Setting up python3-all (3.13.7-1) ... 95s Setting up libxcb-shm0:s390x (1.17.0-2build1) ... 95s Setting up libxcb-icccm4:s390x (0.4.2-1) ... 95s Setting up libgomp1:s390x (15.2.0-7ubuntu1) ... 95s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 95s Setting up libpcre2-16-0:s390x (10.46-1) ... 95s Setting up libaec0:s390x (1.1.4-2) ... 95s Setting up python3-platformdirs (4.3.7-1) ... 95s Setting up libxcb-util1:s390x (0.4.1-1) ... 95s Setting up libxxf86vm1:s390x (1:1.1.4-2) ... 95s Setting up libxcb-xkb1:s390x (1.17.0-2build1) ... 95s Setting up libxcb-image0:s390x (0.4.0-2build1) ... 95s Setting up python3-fs (2.4.16-8ubuntu1) ... 95s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 95s Setting up libxcb-present0:s390x (1.17.0-2build1) ... 95s Setting up unicode-data (16.0.0-1) ... 95s Setting up libqt5core5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 95s Setting up python3-decorator (5.2.1-2) ... 95s Setting up libblas3:s390x (3.12.1-7) ... 95s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 95s Setting up libxcb-xinerama0:s390x (1.17.0-2build1) ... 95s Setting up libzopfli1 (1.0.3-3) ... 95s Setting up libfreetype6:s390x (2.13.3+dfsg-1build1) ... 95s Setting up libxcb-sync1:s390x (1.17.0-2build1) ... 95s Setting up python3-brotli (1.1.0-2build6) ... 95s Setting up libavahi-common-data:s390x (0.8-16ubuntu3) ... 95s Setting up liblzf1:s390x (3.6-4) ... 95s Setting up python3-cycler (0.12.1-2) ... 95s Setting up libimagequant0:s390x (2.18.0-1build1) ... 95s Setting up libxkbcommon-x11-0:s390x (1.12.3-1) ... 95s Setting up fonts-dejavu-mono (2.37-8) ... 95s Setting up python3-kiwisolver (1.4.10~rc0-1) ... 95s Setting up libhwloc15:s390x (2.12.2-1) ... 95s Setting up python3-numpy-dev:s390x (1:2.3.4+ds-3ubuntu1) ... 95s Setting up libtcl8.6:s390x (8.6.17+dfsg-1) ... 95s Setting up fonts-dejavu-core (2.37-8) ... 95s Setting up libjpeg-turbo8:s390x (2.1.5-4ubuntu2) ... 95s Setting up libgfortran5:s390x (15.2.0-7ubuntu1) ... 95s Setting up libvulkan1:s390x (1.4.328.1-1) ... 95s Setting up libwebp7:s390x (1.5.0-0.1) ... 95s Setting up python3-pyqt5.sip (12.17.1-1) ... 95s Setting up libmtdev1t64:s390x (1.1.7-1) ... 95s Setting up ocl-icd-libopencl1:s390x (2.3.4-1) ... 95s Setting up libxshmfence1:s390x (1.3.3-1) ... 95s Setting up libxcb-randr0:s390x (1.17.0-2build1) ... 95s Setting up libxslt1.1:s390x (1.1.43-0.3) ... 95s Setting up libqt5sql5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 95s Setting up libmd4c0:s390x (0.5.2-2) ... 95s Setting up librdmacm1t64:s390x (56.1-1ubuntu1) ... 95s Setting up libopenjp2-7:s390x (2.5.3-2.1) ... 95s Setting up libharfbuzz0b:s390x (12.1.0-1) ... 95s Setting up libxss1:s390x (1:1.2.3-1build3) ... 95s Setting up python3-mpmath (1.3.0-2) ... 96s Setting up python-matplotlib-data (3.10.7+dfsg1-1) ... 96s Setting up libwebpmux3:s390x (1.5.0-0.1) ... 96s Setting up libsz2:s390x (1.1.4-2) ... 96s Setting up libwacom-common (2.16.1-1) ... 96s Setting up libwayland-client0:s390x (1.24.0-2) ... 96s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 96s Setting up libfabric1:s390x (2.1.0-1.1) ... 96s Setting up python3-sympy (1.14.0-2) ... 102s Setting up libice6:s390x (2:1.1.1-1) ... 102s Setting up mesa-libgallium:s390x (25.2.6-1ubuntu1) ... 102s Setting up liblapack3:s390x (3.12.1-7) ... 102s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 102s Setting up libqt5dbus5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 102s Setting up libgbm1:s390x (25.2.6-1ubuntu1) ... 102s Setting up libwacom9:s390x (2.16.1-1) ... 102s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 102s Setting up libwebpdemux2:s390x (1.5.0-0.1) ... 102s Setting up libgl1-mesa-dri:s390x (25.2.6-1ubuntu1) ... 102s Setting up libqt5network5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 102s Setting up libavahi-common3:s390x (0.8-16ubuntu3) ... 102s Setting up libqt5xml5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 102s Setting up libqt5test5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 102s Setting up libhwloc-plugins:s390x (2.12.2-1) ... 102s Setting up python3-zopfli (0.4.0-1) ... 102s Setting up libinput-bin (1.28.1-1ubuntu2) ... 102s Setting up libegl-mesa0:s390x (25.2.6-1ubuntu1) ... 102s Setting up libraqm0:s390x (0.10.3-1) ... 102s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 104s Setting up libhdf5-310:s390x (1.14.5+repack-4) ... 104s Setting up python3-lxml:s390x (6.0.2-1) ... 104s Setting up libtiff6:s390x (4.7.0-3ubuntu3) ... 104s Setting up libegl1:s390x (1.7.0-1build2) ... 104s Setting up python3-contourpy (1.3.1-2) ... 104s Setting up libfontconfig1:s390x (2.15.0-2.3ubuntu1) ... 104s Setting up libsm6:s390x (2:1.2.6-1) ... 104s Setting up libavahi-client3:s390x (0.8-16ubuntu3) ... 104s Setting up libinput10:s390x (1.28.1-1ubuntu2) ... 104s Setting up libopenmpi40:s390x (5.0.8-8ubuntu1) ... 104s Setting up libhdf5-hl-310:s390x (1.14.5+repack-4) ... 104s Setting up fontconfig (2.15.0-2.3ubuntu1) ... 106s Regenerating fonts cache... done. 106s Setting up libxft2:s390x (2.3.6-1build1) ... 106s Setting up libglx-mesa0:s390x (25.2.6-1ubuntu1) ... 106s Setting up python3-scipy (1.15.3-1ubuntu1) ... 109s Setting up libglx0:s390x (1.7.0-1build2) ... 109s Setting up libtk8.6:s390x (8.6.17-1) ... 109s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 109s Setting up libhdf5-openmpi-310:s390x (1.14.5+repack-4) ... 109s Setting up python3.13-tk (3.13.9-1) ... 109s Setting up python3-pil:s390x (11.3.0-1ubuntu2) ... 110s Setting up libgl1:s390x (1.7.0-1build2) ... 110s Setting up python3-h5py (3.13.0-1ubuntu1) ... 110s Setting up python3-hdf5plugin (5.1.0-1) ... 110s Setting up libcups2t64:s390x (2.4.12-0ubuntu3) ... 110s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 110s Setting up bitshuffle (0.5.2-1build2) ... 110s Setting up python3.14-tk (3.14.0-4) ... 110s Setting up blt (2.5.3+dfsg-8) ... 110s Setting up python3-tk:s390x (3.13.9-1) ... 110s Setting up libqt5gui5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 110s Setting up python3-pil.imagetk:s390x (11.3.0-1ubuntu2) ... 110s Setting up libqt5widgets5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 110s Setting up libqt5help5:s390x (5.15.17-3) ... 110s Setting up libqt5printsupport5t64:s390x (5.15.17+dfsg-1ubuntu1) ... 110s Setting up libqt5designer5:s390x (5.15.17-3) ... 110s Setting up python3-pyqt5 (5.15.11+dfsg-3) ... 110s Setting up python3-ufolib2 (0.17.1+dfsg1-1) ... 111s Setting up python3-fonttools (4.57.0-2build1) ... 111s Setting up python3-matplotlib (3.10.7+dfsg1-1) ... 113s Setting up python3-fabio (2024.9.0-7) ... 113s Processing triggers for udev (257.9-0ubuntu2) ... 113s Processing triggers for libc-bin (2.42-2ubuntu2) ... 113s Processing triggers for man-db (2.13.1-1) ... 115s autopkgtest [03:56:16]: test command1: set -efu ; cp bootstrap.py pyproject.toml run_tests.py README.rst "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py run_tests.py -v -m --installed ; done 115s autopkgtest [03:56:16]: test command1: [----------------------- 115s Testing with python3.13: 115s INFO:hdf5plugin._utils:bshuf filter already loaded, skip it. 115s WARNING:run_tests:Test fabio 2024.9.0 from /usr/lib/python3/dist-packages/fabio 115s test_iter_abort_iteration (fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration) ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestFabioImage.test_iter_abort_iteration 115s testcopy (fabio.test.test_fabio_image.Test50000.testcopy) 115s test the copy statement ... ok 115s INFO:memProf:Time: 0.004s RAM: 6.144 Mb fabio.test.test_fabio_image.Test50000.testcopy 115s testgetmax (fabio.test.test_fabio_image.Test50000.testgetmax) 115s check max ... ok 115s INFO:memProf:Time: 0.001s RAM: 0.684 Mb fabio.test.test_fabio_image.Test50000.testgetmax 115s testgetmean (fabio.test.test_fabio_image.Test50000.testgetmean) 115s check mean ... ok 115s INFO:memProf:Time: 0.002s RAM: 0.128 Mb fabio.test.test_fabio_image.Test50000.testgetmean 115s testgetmin (fabio.test.test_fabio_image.Test50000.testgetmin) 115s check min ... ok 115s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.Test50000.testgetmin 115s testgetstddev (fabio.test.test_fabio_image.Test50000.testgetstddev) 115s check stddev ... ok 115s INFO:memProf:Time: 0.004s RAM: 8.328 Mb fabio.test.test_fabio_image.Test50000.testgetstddev 115s testRebin (fabio.test.test_fabio_image.TestSlices.testRebin) 115s Test the rebin method ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testRebin 115s testgetmax (fabio.test.test_fabio_image.TestSlices.testgetmax) 115s check max ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmax 115s testgetmin (fabio.test.test_fabio_image.TestSlices.testgetmin) 115s check min ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testgetmin 115s testintegratearea (fabio.test.test_fabio_image.TestSlices.testintegratearea) 115s check integrations ... ok 115s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestSlices.testintegratearea 115s testFlat (fabio.test.test_fabio_image.TestOpen.testFlat) 115s no compression ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testFlat 115s test_badtype (fabio.test.test_fabio_image.TestOpen.test_badtype) ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_badtype 115s test_pathlib (fabio.test.test_fabio_image.TestOpen.test_pathlib) ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.test_pathlib 115s testbz2 (fabio.test.test_fabio_image.TestOpen.testbz2) 115s bzipped ... ok 115s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testbz2 115s testgz (fabio.test.test_fabio_image.TestOpen.testgz) 115s gzipped ... ok 115s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_fabio_image.TestOpen.testgz 115s testpil (fabio.test.test_fabio_image.TestPilImage.testpil) ... WARNING:fabio.DEPRECATION:Function toPIL16 is deprecated since fabio version 0.9. Reason: Not maintained. Use 'fabio.utils.pilutils.create_pil_16' instead. 115s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 210, in testpil 115s pim = img.toPIL16() 116s ok 116s INFO:memProf:Time: 0.048s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage.testpil 116s testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) ... ERROR 116s INFO:memProf:Time: 0.048s RAM: 0.000 Mb fabio.test.test_fabio_image.TestPilImage2.testpil 116s testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py:249: RuntimeWarning: invalid value encountered in cast 116s return ((numpy.random.random(shape) - 0.5) * maxi / 10).astype(typ) 116s 116s ERROR 116s INFO:memProf:Time: 0.052s RAM: 3.744 Mb fabio.test.test_fabio_image.TestPilImage3.testpil 116s test_cleanup_pilimage_cache (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache) ... WARNING:fabio.DEPRECATION:Function pilimage is deprecated. Reason: Setting pilimage not supported. This attrbute is not cached anymore. 116s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 266, in test_cleanup_pilimage_cache 116s image.pilimage = None 116s ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_cleanup_pilimage_cache 116s test_patch_dim (fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim) ... WARNING:fabio.DEPRECATION:Function dim2 is deprecated. Reason: dim2 should not be updated. 116s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 258, in test_patch_dim 116s image.dim2, image.dim1 = data.shape 116s WARNING:fabio.DEPRECATION:Function dim1 is deprecated. Reason: dim1 should not be updated. 116s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 258, in test_patch_dim 116s image.dim2, image.dim1 = data.shape 116s ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio_image.TestDeprecatedFabioImage.test_patch_dim 116s test_many_cases (fabio.test.test_filenames.TestFilenames.test_many_cases) 116s loop over CASES ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_many_cases 116s test_more_cases (fabio.test.test_filenames.TestFilenames.test_more_cases) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases 116s test_more_cases_jump (fabio.test.test_filenames.TestFilenames.test_more_cases_jump) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenames.test_more_cases_jump 116s test_FileNameObject_can_iterate (fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate) 116s Regression test for Fable ... ok 116s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_FileNameObject_can_iterate 116s test_files_are_being_opened (fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened) 116s Regression test for Fable ... ok 116s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_filenames.TestFilenameObjects.test_files_are_being_opened 116s testfirst (fabio.test.test_file_series.TestRandomSeries.testfirst) 116s check first ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testfirst 116s testjump (fabio.test.test_file_series.TestRandomSeries.testjump) 116s check jump ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testjump 116s testlast (fabio.test.test_file_series.TestRandomSeries.testlast) 116s check first ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestRandomSeries.testlast 116s testfirst (fabio.test.test_file_series.TestEdfNumbered.testfirst) 116s first in series ... ok 116s INFO:memProf:Time: 0.002s RAM: 0.640 Mb fabio.test.test_file_series.TestEdfNumbered.testfirst 116s testlast (fabio.test.test_file_series.TestEdfNumbered.testlast) 116s last in series ... ok 116s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlast 116s testlen (fabio.test.test_file_series.TestEdfNumbered.testlen) 116s check len ... ok 116s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testlen 116s testnext (fabio.test.test_file_series.TestEdfNumbered.testnext) 116s check all in order ... ok 116s INFO:memProf:Time: 0.011s RAM: 0.640 Mb fabio.test.test_file_series.TestEdfNumbered.testnext 116s testnextjump (fabio.test.test_file_series.TestEdfNumbered.testnextjump) 116s check current ... ok 116s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testnextjump 116s testprevious (fabio.test.test_file_series.TestEdfNumbered.testprevious) 116s check all in order ... ok 116s INFO:memProf:Time: 0.011s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevious 116s testprevjump (fabio.test.test_file_series.TestEdfNumbered.testprevjump) 116s check current ... ok 116s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestEdfNumbered.testprevjump 116s test_anyframe_frames (fabio.test.test_file_series.TestFileSeries.test_anyframe_frames) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_frames 116s test_anyframe_getframe (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe) ... ok 116s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframe 116s test_anyframe_getframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_getframes 116s test_anyframe_nframes (fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nframes 116s test_anyframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_anyframe_nofiles 116s test_filename_generator (fabio.test.test_file_series.TestFileSeries.test_filename_generator) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_generator 116s test_filename_iterator (fabio.test.test_file_series.TestFileSeries.test_filename_iterator) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_filename_iterator 116s test_multiframe_frames (fabio.test.test_file_series.TestFileSeries.test_multiframe_frames) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_frames 116s test_multiframe_getframe (fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_getframe 116s test_multiframe_nframes (fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nframes 116s test_multiframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_multiframe_nofiles 116s test_singleframe_frames (fabio.test.test_file_series.TestFileSeries.test_singleframe_frames) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_frames 116s test_singleframe_getframe (fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_getframe 116s test_singleframe_nframes (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes 116s test_singleframe_nframes2 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes2 116s test_singleframe_nframes3 (fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nframes3 116s test_singleframe_nofiles (fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_singleframe_nofiles 116s test_with_filename_series (fabio.test.test_file_series.TestFileSeries.test_with_filename_series) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_filename_series 116s test_with_numbered_file_series (fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series) ... ok 116s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_file_series.TestFileSeries.test_with_numbered_file_series 116s test_next1 (fabio.test.test_filename_steps.TestNext.test_next1) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestNext.test_next1 116s test_prev1 (fabio.test.test_filename_steps.TestPrev.test_prev1) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestPrev.test_prev1 116s test_jump1 (fabio.test.test_filename_steps.TestJump.test_jump1) ... ok 116s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_filename_steps.TestJump.test_jump1 116s testheader (fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 117s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.img.bz2 successfully downloaded. 120s ok 120s INFO:memProf:Time: 4.120s RAM: 56.484 Mb fabio.test.test_header_not_singleton.TestHeaderNotSingleton.testheader 120s testcase (fabio.test.test_open_header.Test1.testcase) 120s check openheader can read edf headers ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675_header_only.edf.bz2') 120s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675_header_only.edf.bz2 successfully downloaded. 120s ok 120s INFO:memProf:Time: 0.174s RAM: 0.000 Mb fabio.test.test_open_header.Test1.testcase 120s testAdsc (fabio.test.test_open_image.TestOpenDtrek.testAdsc) 120s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 120s ok 120s INFO:memProf:Time: 0.167s RAM: 147.384 Mb fabio.test.test_open_image.TestOpenDtrek.testAdsc 120s testAdscBz2 (fabio.test.test_open_image.TestOpenDtrek.testAdscBz2) 120s openimage opening adsc bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 121s ok 121s INFO:memProf:Time: 1.291s RAM: 1.636 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscBz2 121s testAdscGz (fabio.test.test_open_image.TestOpenDtrek.testAdscGz) 121s openimage opening adsc gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.gz') 122s ok 122s INFO:memProf:Time: 0.294s RAM: 13.420 Mb fabio.test.test_open_image.TestOpenDtrek.testAdscGz 122s testBruker (fabio.test.test_open_image.TestOpenBruker.testBruker) 122s openimage opening bruker ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 122s INFO:fabio.utils.ExternalResources:Image Cr8F8140k103.0026.bz2 successfully downloaded. 122s ok 122s INFO:memProf:Time: 0.499s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBruker 122s testBrukerBz2 (fabio.test.test_open_image.TestOpenBruker.testBrukerBz2) 122s openimage opening bruker bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 122s ok 122s INFO:memProf:Time: 0.043s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerBz2 122s testBrukerGz (fabio.test.test_open_image.TestOpenBruker.testBrukerGz) 122s openimage opening bruker gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.gz') 122s ok 122s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenBruker.testBrukerGz 122s testEdf (fabio.test.test_open_image.TestOpenEdf.testEdf) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 123s INFO:fabio.utils.ExternalResources:Image F2K_Seb_Lyso0675.edf.bz2 successfully downloaded. 124s ok 124s INFO:memProf:Time: 1.882s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdf 124s testEdfBz2 (fabio.test.test_open_image.TestOpenEdf.testEdfBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 125s ok 125s INFO:memProf:Time: 1.344s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfBz2 125s testEdfGz (fabio.test.test_open_image.TestOpenEdf.testEdfGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.gz') 126s ok 126s INFO:memProf:Time: 0.243s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenEdf.testEdfGz 126s testMask (fabio.test.test_open_image.TestOpenMask.testMask) 126s openimage opening fit2d msk ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 126s INFO:fabio.utils.ExternalResources:Image face.msk.bz2 successfully downloaded. 126s ok 126s INFO:memProf:Time: 0.158s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMask 126s testMaskBz2 (fabio.test.test_open_image.TestOpenMask.testMaskBz2) 126s openimage opening fit2d msk bzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 126s ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskBz2 126s testMaskGz (fabio.test.test_open_image.TestOpenMask.testMaskGz) 126s openimage opening fit2d msk gzip ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.gz') 126s ok 126s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMask.testMaskGz 126s testMccd (fabio.test.test_open_image.TestOpenMccd.testMccd) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 127s INFO:fabio.utils.ExternalResources:Image somedata_0001.mccd.bz2 successfully downloaded. 127s ok 127s INFO:memProf:Time: 0.821s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccd 127s testMccdBz2 (fabio.test.test_open_image.TestOpenMccd.testMccdBz2) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 127s ok 127s INFO:memProf:Time: 0.118s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdBz2 127s testMccdGz (fabio.test.test_open_image.TestOpenMccd.testMccdGz) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.gz') 127s ok 127s INFO:memProf:Time: 0.023s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenMccd.testMccdGz 127s testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 127s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 127s INFO:fabio.utils.ExternalResources:Image b191_1_9_1.img.bz2 successfully downloaded. 127s ERROR 127s INFO:memProf:Time: 0.490s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxd 127s testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 127s openimage opening adsc ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 128s INFO:fabio.utils.ExternalResources:Image b191_1_9_1_uncompressed.img.bz2 successfully downloaded. 129s ERROR 129s INFO:memProf:Time: 1.487s RAM: 0.000 Mb fabio.test.test_open_image.TestOpenOxd.testOxdUnc 129s testComp (fabio.test.test_compression.TestByteOffset.testComp) ... ok 129s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testComp 129s testSC (fabio.test.test_compression.TestByteOffset.testSC) 129s test that datasets are unchanged after various compression/decompressions ... ok 129s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_compression.TestByteOffset.testSC 129s test_from_time (fabio.test.test_nexus.TestNexus.test_from_time) ... ok 129s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_from_time 129s test_nexus (fabio.test.test_nexus.TestNexus.test_nexus) 129s Test creation of Nexus files ... ok 129s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.test_nexus.TestNexus.test_nexus 129s testDefaultOption (fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -F=msk -o=output 129s INFO:fabio.test.test_fabio_convert:Return code: 0 129s ok 129s INFO:memProf:Time: 0.152s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testDefaultOption 129s testForceOption (fabio.test.test_fabio_convert.TestFabioConvert.testForceOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -f -F=msk -o=output 129s INFO:fabio.test.test_fabio_convert:Return code: 0 129s ok 129s INFO:memProf:Time: 0.149s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testForceOption 129s testFullFormatName (fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=numpyimage -o=output 129s INFO:fabio.test.test_fabio_convert:Return code: 0 129s ok 129s INFO:memProf:Time: 0.150s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testFullFormatName 129s testInteractiveOption (fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -i -F=msk -o=output 129s INFO:fabio.test.test_fabio_convert:Return code: 0 129s ok 129s INFO:memProf:Time: 0.148s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testInteractiveOption 129s testNoClobberOption (fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf -n -F=msk -o=output 130s INFO:fabio.test.test_fabio_convert:Return code: 0 130s ok 130s INFO:memProf:Time: 0.161s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testNoClobberOption 130s testRemoveDestinationOption (fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --remove-destination -F=msk -o=output 130s INFO:fabio.test.test_fabio_convert:Return code: 0 130s ok 130s INFO:memProf:Time: 0.239s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testRemoveDestinationOption 130s testSingleFile (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -o=output/03.msk 130s INFO:fabio.test.test_fabio_convert:Return code: 0 130s ok 130s INFO:memProf:Time: 0.266s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFile 130s testSingleFileToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.edf -F=msk -o=output 130s INFO:fabio.test.test_fabio_convert:Return code: 0 130s ok 130s INFO:memProf:Time: 0.254s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileToDir 130s testSingleFileWithWildcardToDir (fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/03.* -F=msk -o=output 131s INFO:fabio.test.test_fabio_convert:Return code: 0 131s ok 131s INFO:memProf:Time: 0.232s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testSingleFileWithWildcardToDir 131s testUpdateOption (fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption) ... INFO:fabio.test.test_fabio_convert:Execute: /usr/bin/python3.13 /usr/lib/python3/dist-packages/fabio/app/convert.py input/*.edf --update -F=msk -o=output 131s INFO:fabio.test.test_fabio_convert:Return code: 0 131s ok 131s INFO:memProf:Time: 0.306s RAM: 0.000 Mb fabio.test.test_fabio_convert.TestFabioConvert.testUpdateOption 131s test_missing_file (fabio.test.test_failing_files.TestFailingFiles.test_missing_file) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_missing_file 131s test_wrong_dm3 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_dm3 131s test_wrong_edf (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf 131s test_wrong_edf2 (fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_edf2 131s test_wrong_format (fabio.test.test_failing_files.TestFailingFiles.test_wrong_format) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_format 131s test_wrong_msk (fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_msk 131s test_wrong_numpy (fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_failing_files.TestFailingFiles.test_wrong_numpy 131s test_annotation (fabio.test.test_formats.TestRegistration.test_annotation) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_annotation 131s test_deprecated_fabioimage_factory (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory) 131s Check that it is still working ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory 131s test_deprecated_fabioimage_factory_missing_format (fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format) 131s Check that it is still working ... ok 131s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_deprecated_fabioimage_factory_missing_format 131s test_extenstion_registry (fabio.test.test_formats.TestRegistration.test_extenstion_registry) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_extenstion_registry 131s test_fabio_factory (fabio.test.test_formats.TestRegistration.test_fabio_factory) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory 131s test_fabio_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabio_factory_missing_format 131s test_fabioformats_factory (fabio.test.test_formats.TestRegistration.test_fabioformats_factory) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory 131s test_fabioformats_factory_missing_format (fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_fabioformats_factory_missing_format 131s test_function (fabio.test.test_formats.TestRegistration.test_function) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_function 131s test_not_existing (fabio.test.test_formats.TestRegistration.test_not_existing) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_formats.TestRegistration.test_not_existing 131s test_edf_to_tiff (fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf') 131s INFO:fabio.utils.ExternalResources:Image face.edf.bz2 successfully downloaded. 131s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 131s ok 131s INFO:memProf:Time: 0.159s RAM: 0.000 Mb fabio.test.test_image_convert.TestImageConvert.test_edf_to_tiff 131s test_append (fabio.test.test_tiffio.TestTiffIO.test_append) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_append 131s test_read (fabio.test.test_tiffio.TestTiffIO.test_read) ... INFO:fabio.test.test_tiffio:nRows = 100 131s INFO:fabio.test.test_tiffio:nColumns = 100 131s INFO:fabio.test.test_tiffio:nBits = 16 131s INFO:fabio.test.test_tiffio:compression = False 131s INFO:fabio.test.test_tiffio:compression_type = 1 131s INFO:fabio.test.test_tiffio:imageDescription = Title=1st 131s 131s INFO:fabio.test.test_tiffio:stripOffsets = [168] 131s INFO:fabio.test.test_tiffio:rowsPerStrip = 100 131s INFO:fabio.test.test_tiffio:stripByteCounts = [20000] 131s INFO:fabio.test.test_tiffio:software = PyMca.TiffIO 131s INFO:fabio.test.test_tiffio:date = Unknown Date 131s INFO:fabio.test.test_tiffio:sampleFormat = 1 131s INFO:fabio.test.test_tiffio:photometricInterpretation = 1 131s INFO:fabio.test.test_tiffio:info = {'Title': '1st'} 131s INFO:fabio.test.test_tiffio:data [0, 0:10] = [0 1 2 3 4 5 6 7 8 9] 131s ok 131s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_read 131s test_write (fabio.test.test_tiffio.TestTiffIO.test_write) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_tiffio.TestTiffIO.test_write 131s test_single_frame_iterator (fabio.test.test_frames.TestFabioImage.test_single_frame_iterator) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestFabioImage.test_single_frame_iterator 131s test_content (fabio.test.test_frames.TestVirtualEdf.test_content) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_content 131s test_frames_abort_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_abort_iteration 131s test_frames_full_iteration (fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_full_iteration 131s test_frames_random_access (fabio.test.test_frames.TestVirtualEdf.test_frames_random_access) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestVirtualEdf.test_frames_random_access 131s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s INFO:fabio.utils.ExternalResources:Image multiframes.edf.bz2 successfully downloaded. 131s test_content (fabio.test.test_frames.TestEdf.test_content) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_content 131s test_frames_abort_iteration (fabio.test.test_frames.TestEdf.test_frames_abort_iteration) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_abort_iteration 131s test_frames_full_iteration (fabio.test.test_frames.TestEdf.test_frames_full_iteration) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_full_iteration 131s test_frames_random_access (fabio.test.test_frames.TestEdf.test_frames_random_access) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestEdf.test_frames_random_access 131s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 131s INFO:fabio.utils.ExternalResources:Image multiframes.tif.bz2 successfully downloaded. 131s test_content (fabio.test.test_frames.TestTiff.test_content) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_content 131s test_frames_abort_iteration (fabio.test.test_frames.TestTiff.test_frames_abort_iteration) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_abort_iteration 131s test_frames_full_iteration (fabio.test.test_frames.TestTiff.test_frames_full_iteration) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_full_iteration 131s test_frames_random_access (fabio.test.test_frames.TestTiff.test_frames_random_access) ... ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_frames.TestTiff.test_frames_random_access 131s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.tif.bz2') 131s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s test_frames_abort_iteration (fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration) ... ok 131s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_abort_iteration 131s test_frames_full_iteration (fabio.test.test_frames.TestFileSeries.test_frames_full_iteration) ... ok 131s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_full_iteration 131s test_frames_random_access (fabio.test.test_frames.TestFileSeries.test_frames_random_access) ... ok 131s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_frames.TestFileSeries.test_frames_random_access 131s test_open (fabio.test.test_fabio.TestFabio.test_open) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open 131s test_open_bytesio (fabio.test.test_fabio.TestFabio.test_open_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_bytesio 131s test_open_fabio_bytesio (fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_fabio_bytesio 131s test_open_series (fabio.test.test_fabio.TestFabio.test_open_series) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series 131s test_open_series_first_filename (fabio.test.test_fabio.TestFabio.test_open_series_first_filename) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_first_filename 131s test_open_series_with (fabio.test.test_fabio.TestFabio.test_open_series_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_series_with 131s test_open_with (fabio.test.test_fabio.TestFabio.test_open_with) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('multiframes.edf.bz2') 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_fabio.TestFabio.test_open_with 131s test_getstats (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats) 131s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_getstats 131s test_headers (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_headers 131s test_read (fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read) 131s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestFlatEdfs.test_read 131s test_getstats (fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats) 131s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.062s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_getstats 131s test_headers (fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_headers 131s test_read (fabio.test.codecs.test_edfimage.TestBzipEdf.test_read) 131s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBzipEdf.test_read 131s test_getstats (fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats) 131s test statistics ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_getstats 131s test_headers (fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_headers 131s test_read (fabio.test.codecs.test_edfimage.TestGzipEdf.test_read) 131s check readable ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/im0000.edf (frame 0) misses mandatory keys: SIZE HEADERID 131s ok 131s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestGzipEdf.test_read 131s test_read (fabio.test.codecs.test_edfimage.TestEdfs.test_read) 131s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 131s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 132s INFO:fabio.utils.ExternalResources:Image id13_badPadding.edf.bz2 successfully downloaded. 133s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf Mean: exp=1504.29, obt=1504.291387796402 133s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf StdDev: exp=217.61, obt=217.60628547694913 133s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 Mean: exp=1504.29, obt=1504.291387796402 133s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.bz2 StdDev: exp=217.61, obt=217.60628547694913 134s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz Mean: exp=1504.29, obt=1504.291387796402 134s INFO:fabio.test.codecs.test_edfimage:F2K_Seb_Lyso0675.edf.gz StdDev: exp=217.61, obt=217.60628547694913 134s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf Mean: exp=275.62, obt=275.6165885925293 134s INFO:fabio.test.codecs.test_edfimage:id13_badPadding.edf StdDev: exp=583.44, obt=583.4356660155631 134s ok 134s INFO:memProf:Time: 2.115s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_read 134s test_rebin (fabio.test.codecs.test_edfimage.TestEdfs.test_rebin) 134s test the rebin of edfdata ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('F2K_Seb_Lyso0675.edf.bz2') 134s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('id13_badPadding.edf.bz2') 134s ok 134s INFO:memProf:Time: 0.039s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfs.test_rebin 134s test_read (fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read) 134s check we can read these images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfGzip_U16.edf.bz2') 135s INFO:fabio.utils.ExternalResources:Image edfGzip_U16.edf.bz2 successfully downloaded. 135s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf.bz2') 136s INFO:fabio.utils.ExternalResources:Image edfCompressed_U16.edf.bz2 successfully downloaded. 136s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfUncompressed_U16.edf.bz2') 137s INFO:fabio.utils.ExternalResources:Image edfUncompressed_U16.edf.bz2 successfully downloaded. 139s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 139s INFO:fabio.edfimage:Data stream is padded : 8389062 > required 8388608 bytes 139s ok 139s INFO:memProf:Time: 5.551s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfCompressedData.test_read 139s test_getFrame_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 140s INFO:fabio.utils.ExternalResources:Image MultiFrame.edf.bz2 successfully downloaded. 142s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 142s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame0.edf.bz2 successfully downloaded. 143s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 144s INFO:fabio.utils.ExternalResources:Image MultiFrame-Frame1.edf.bz2 successfully downloaded. 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s ok 145s INFO:memProf:Time: 5.361s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_mono 145s test_getFrame_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s ok 145s INFO:memProf:Time: 0.009s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_getFrame_multi 145s test_next_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s ok 145s INFO:memProf:Time: 0.012s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_next_multi 145s test_openimage_multiframes (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes) 145s test if openimage can directly read first or second frame of a multi-frame ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s ok 145s INFO:memProf:Time: 0.014s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_openimage_multiframes 145s test_previous_mono (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s ok 145s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_mono 145s test_previous_multi (fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 145s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame1.edf.bz2') 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s ok 145s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfMultiFrame.test_previous_multi 145s test_578 (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_578) 145s Non regression for issue 578: EDFImage.fast_read_data: cannot read a line ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_578 145s test_fastread (fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame-Frame0.edf.bz2') 145s ok 145s INFO:memProf:Time: 0.184s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfFastRead.test_fastread 145s testBzip2 (fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2) ... ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testBzip2 145s testFlat (fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testFlat 145s testGzip (fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip) ... ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfWrite.testGzip 145s test_bug_27 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27) 145s import fabio ... ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_27 145s test_bug_459 (fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_bug_459 145s test_remove_metadata_header (fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 145s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 145s ok 145s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfRegression.test_remove_metadata_header 145s test_base (fabio.test.codecs.test_edfimage.TestBadFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 0) misses mandatory keys: SIZE HEADERID 145s INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_base.edf (frame 1) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_base 145s test_empty (fabio.test.codecs.test_edfimage.TestBadFiles.test_empty) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_empty 145s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header.edf (frame 0) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_half_header 145s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 145s INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data.edf (frame 1) misses mandatory keys: SIZE HEADERID 145s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_half_data 145s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 145s INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data.edf (frame 1) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_full_frame_plus_header_with_no_data 145s test_half_header (fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_half_header 145s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 145s ERROR:fabio.edfimage:Data stream is incomplete: 131072 < expected 262144 bytes 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_half_data 145s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadFiles/fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data.edf (frame 0) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_header_with_no_data 145s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadFiles.test_wrong_magic 145s test_base (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 145s INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_base 145s test_empty (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_empty 145s test_full_frame_plus_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_half_header 145s test_full_frame_plus_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 145s INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_half_data 145s test_full_frame_plus_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 145s INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data.edf.gz (frame 1) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_full_frame_plus_header_with_no_data 145s test_half_header (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_half_header 145s test_header_with_half_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_half_data 145s test_header_with_no_data (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data) ... INFO:fabio.edfimage:EDF file /tmp/fabio_w2n1tdb1_ubuntu/TestBadGzFiles/fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data.edf.gz (frame 0) misses mandatory keys: SIZE HEADERID 145s ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_header_with_no_data 145s test_wrong_magic (fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic) ... ok 145s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestBadGzFiles.test_wrong_magic 145s test_multi_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame) 145s Test iterator on a multi-frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 145s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 146s INFO:fabio.edfimage:Data stream is padded : 4092928 > required 4092732 bytes 146s ok 146s INFO:memProf:Time: 0.716s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_multi_frame 146s test_single_frame (fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame) 146s Test iterator on a single frame EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('edfCompressed_U16.edf') 146s ok 146s INFO:memProf:Time: 0.439s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfIterator.test_single_frame 146s test_all_images (fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images) ... INFO:fabio.utils.ExternalResources:Image sphere2saxs_output.tar.bz2 successfully downloaded. 147s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 147s fd.extractall(output) 147s 147s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 147s INFO:fabio.edfimage:Data stream is padded : 80484 > required 80000 bytes 147s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 147s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 147s INFO:fabio.edfimage:Data stream is padded : 80384 > required 80000 bytes 147s ok 147s INFO:memProf:Time: 0.565s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestSphere2SaxsSamples.test_all_images 147s testNonAsciiHeader (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader) 147s Non-ascii characters are skipped. ... WARNING:fabio.edfimage:Non ASCII in key-value: Drop b'mykey' = b'\xc3\xa9yvalue' 147s ok 147s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testNonAsciiHeader 147s testReadBadPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding) 147s Some old data were found with headers padded with 0xcd (issue #373) ... ok 147s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadBadPadding 147s testReadGoodPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding) ... ok 147s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadGoodPadding 147s testReadZeroPadding (fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding) ... ok 147s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_edfimage.TestEdfBadHeader.testReadZeroPadding 147s test_edf6_single_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz) 147s Test reading gzipped data files linking to an external binary data file. ... INFO:fabio.utils.ExternalResources:Image ehf_images2.tar.bz2 successfully downloaded. 147s WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 147s fd.extractall(output) 147s 147s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 147s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 147s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 147s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 147s ok 147s INFO:memProf:Time: 0.839s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edf6_single_raw_bf_gblk_gz 147s test_edfblocktypes (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes) 147s Test reading (gzipped) extended edf multi frame data files with and without a general block ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 147s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 147s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 147s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 147s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 147s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 147s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 147s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 147s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 148s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 148s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 148s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 148s INFO:fabio.edfimage:Data stream is padded : 2875 > required 2400 bytes 148s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 148s INFO:fabio.edfimage:Data stream is padded : 2874 > required 2400 bytes 148s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 148s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 148s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 148s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 148s WARNING:fabio.compression.compression:Encounter the python-gzip bug with trailing garbage, trying subprocess gzip 148s INFO:fabio.edfimage:Data stream is padded : 2873 > required 2400 bytes 148s ok 148s INFO:memProf:Time: 0.100s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfblocktypes 148s test_edfmulti_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk) 148s Reading an uncompressed edf-multi-frame-file with references to data ... WARNING:py.warnings:/usr/lib/python3/dist-packages/fabio/utils/ExternalResources.py:214: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior. 148s fd.extractall(output) 148s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s ok 148s INFO:memProf:Time: 0.171s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk 148s test_edfmulti_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz) 148s Test reading the files of the test test_edfmulti_raw_bf_gblk after ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s ok 148s INFO:memProf:Time: 0.187s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_bf_gblk_gz 148s test_edfmulti_raw_dark_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk) 148s Linking data of several frames to different parts of a single external ... INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0017 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0 s 148s INFO:fabio.edfimage:Data stream is padded : 29184 > required 28800 bytes 148s ok 148s INFO:memProf:Time: 0.078s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfmulti_raw_dark_raw_bf_gblk 148s test_edfsingle_raw_bf_gblk (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk) 148s Reading an uncompressed edf-single-frame-file with references to data ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 148s ok 148s INFO:memProf:Time: 0.082s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk 148s test_edfsingle_raw_bf_gblk_gz (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz) 148s Test reading gzipped data files linking to an external binary data file. ... WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterClosingTime = 0.0045 s 148s WARNING:fabio.edfimage:Duplicated key: Drop ShutterOpeningTime = 0.0045 s 148s ok 148s INFO:memProf:Time: 0.084s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_edfsingle_raw_bf_gblk_gz 148s test_pitfalls (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls) 148s multi5+headerblob_edf1.edf.gz ... INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s INFO:fabio.edfimage:Data stream is padded : 2560 > required 2400 bytes 148s ok 148s INFO:memProf:Time: 0.103s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_pitfalls 148s test_special (fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special) 148s 09_special/face_ok.edf.gz ... INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 148s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_ok.edf.gz (frame 0) misses mandatory keys: SIZE 148s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 148s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary1.edf.gz (frame 0) misses mandatory keys: SIZE 148s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 148s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary2.edf.gz (frame 0) misses mandatory keys: SIZE 148s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 148s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/ehf_images2.tar.bz2__content/00_edfblocktypes/../09_special/face_headerendatboundary3.edf.gz (frame 0) misses mandatory keys: SIZE 148s ok 148s INFO:memProf:Time: 0.088s RAM: 0.000 Mb fabio.test.codecs.test_edfimage_expg.EdfBlockBoundaryCases.test_special 148s test_bug_388 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 149s INFO:fabio.utils.ExternalResources:Image run2_1_00148.edf.bz2 successfully downloaded. 174s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 175s INFO:fabio.utils.ExternalResources:Image run2_1_00148.cbf.bz2 successfully downloaded. 176s ok 176s INFO:memProf:Time: 27.845s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_388 176s test_bug_408 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408) 176s Bug when reading files generated by XDS ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 176s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 176s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XDS.cbf.bz2') 177s INFO:fabio.utils.ExternalResources:Image XDS.cbf.bz2 successfully downloaded. 177s ok 177s INFO:memProf:Time: 1.209s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_408 177s test_bug_528 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528) 177s Bug when writing/reading small files ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 177s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 177s ok 177s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_528 177s test_bug_535 (fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535) 177s Bug when reading files with long path in header ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 177s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 177s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref-test_5_0001.cbf') 178s INFO:fabio.utils.ExternalResources:Image ref-test_5_0001.cbf.bz2 successfully downloaded. 181s ok 181s INFO:memProf:Time: 3.684s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_bug_535 181s test_byte_offset (fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset) 181s check byte offset algorithm ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 181s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 181s INFO:fabio.test.codecs.test_cbfimage:Timing for Numpy method : 0.194s 181s INFO:fabio.test.codecs.test_cbfimage:Timing for Cython method : 0.015s, max delta= 0 181s ok 181s INFO:memProf:Time: 0.288s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_byte_offset 181s test_cif (fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 181s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 181s ok 181s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_cif 181s test_consitency_convert (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert) 181s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 181s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 181s ok 181s INFO:memProf:Time: 0.093s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_convert 181s test_consitency_manual (fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual) 181s Test if an image can be read and saved and the results are "similar" ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 181s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 181s ok 181s INFO:memProf:Time: 0.089s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_consitency_manual 181s test_read (fabio.test.codecs.test_cbfimage.TestCbfReader.test_read) 181s check whole reader ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 181s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 182s INFO:fabio.test.codecs.test_cbfimage:Reading CBF took 0.027s whereas the same EDF took 0.001s 182s ok 182s INFO:memProf:Time: 0.063s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_read 182s test_unicode (fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode) 182s Test if an image can be read and saved to an unicode named ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 182s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 182s ok 182s INFO:memProf:Time: 0.093s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_unicode 182s test_write (fabio.test.codecs.test_cbfimage.TestCbfReader.test_write) 182s Rest writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.edf.bz2') 182s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('run2_1_00148.cbf.bz2') 182s ok 182s INFO:memProf:Time: 0.095s RAM: 0.000 Mb fabio.test.codecs.test_cbfimage.TestCbfReader.test_write 182s testsame (fabio.test.codecs.test_dtrekimage.TestMatch.testsame) 182s test ADSC image match to EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 182s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.edf.bz2') 183s INFO:fabio.utils.ExternalResources:Image mb_LP_1_001.edf.bz2 successfully downloaded. 213s ok 213s INFO:memProf:Time: 31.236s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestMatch.testsame 213s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mb_LP_1_001.img.bz2') 213s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('HSA_1_5mg_C1_0004.img.bz2') 213s INFO:fabio.utils.ExternalResources:Image HSA_1_5mg_C1_0004.img.bz2 successfully downloaded. 215s test_read (fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read) 215s check we can read flat ADSC images ... ok 215s INFO:memProf:Time: 0.780s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestRealSamples.test_read 215s test_write_and_read (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read) ... WARNING:fabio.dtrekimage:Data type uint64 unsupported. Store it as uint32. 215s WARNING:fabio.dtrekimage:Data type int64 unsupported. Store it as int32. 215s WARNING:fabio.dtrekimage:Data type float16 unsupported. Store it as float32. 215s ok 215s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read 215s test_write_and_read_cube (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube) ... ok 215s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_cube 215s test_write_and_read_empty (fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty) ... ok 215s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_dtrekimage.TestDtrekImplementation.test_write_and_read_empty 215s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch) 215s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 215s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.edf.bz2') 215s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/face.edf (frame 0) misses mandatory keys: SIZE 215s ok 215s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestFaceMask.test_getmatch 215s test_getmatch (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch) 215s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 216s INFO:fabio.utils.ExternalResources:Image fit2d_click.msk.bz2 successfully downloaded. 216s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 216s INFO:fabio.utils.ExternalResources:Image fit2d_click.edf.bz2 successfully downloaded. 216s INFO:fabio.edfimage:EDF file /tmp/fabio_testdata_ubuntu/fit2d_click.edf (frame 0) misses mandatory keys: SIZE 216s ok 216s INFO:memProf:Time: 0.357s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_getmatch 216s test_read (fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read) 216s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.msk.bz2') 216s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d_click.edf.bz2') 216s ok 216s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestClickedMask.test_read 216s testBzip2 (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2) ... ok 216s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testBzip2 216s testFlat (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat) ... ok 216s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testFlat 216s testGzip (fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip) ... ok 216s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dmaskimage.TestMskWrite.testGzip 216s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.spr.bz2') 216s INFO:fabio.utils.ExternalResources:Image example.spr.bz2 successfully downloaded. 218s test_read (fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read) 220s check we can read flat ADSC images ... ok 220s INFO:memProf:Time: 1.826s RAM: 0.000 Mb fabio.test.codecs.test_fit2dspreadsheetimage.TestRealSamples.test_read 220s test_read (fabio.test.codecs.test_geimage.TestGE.test_read) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.bz2') 221s INFO:fabio.utils.ExternalResources:Image GE_aSI_detector_image_1529.bz2 successfully downloaded. 223s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529.gz') 223s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_aSI_detector_image_1529') 225s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_intact_header.ge') 226s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_intact_header.ge.bz2 successfully downloaded. 228s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('GE_image_1frame_blanked_header.ge') 229s INFO:fabio.utils.ExternalResources:Image GE_image_1frame_blanked_header.ge.bz2 successfully downloaded. 230s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('dark_before_000428.edf.ge5') 231s INFO:fabio.utils.ExternalResources:Image dark_before_000428.edf.ge5.bz2 successfully downloaded. 246s ok 246s INFO:memProf:Time: 26.787s RAM: 0.000 Mb fabio.test.codecs.test_geimage.TestGE.test_read 246s test_aux (fabio.test.codecs.test_mar345image.TestMar345.test_aux) 246s test auxillary functions ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 247s INFO:fabio.utils.ExternalResources:Image example.mar2300.bz2 successfully downloaded. 248s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 249s INFO:fabio.utils.ExternalResources:Image Fe3O4_023_101.mar2560.bz2 successfully downloaded. 249s ok 249s INFO:memProf:Time: 2.729s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_aux 249s test_byteswap_write (fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write) 249s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 249s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 254s ok 254s INFO:memProf:Time: 4.551s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_byteswap_write 254s test_memoryleak (fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak) 254s This test takes a lot of time, so only in debug mode. ... skipped 'very slow test' 254s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_memoryleak 254s test_read (fabio.test.codecs.test_mar345image.TestMar345.test_read) 254s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300') 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.gz') 254s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560') 255s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 255s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.gz') 255s ok 255s INFO:memProf:Time: 1.647s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_read 255s test_write (fabio.test.codecs.test_mar345image.TestMar345.test_write) 255s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('example.mar2300.bz2') 255s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Fe3O4_023_101.mar2560.bz2') 259s ok 259s INFO:memProf:Time: 4.069s RAM: 0.000 Mb fabio.test.codecs.test_mar345image.TestMar345.test_write 259s test_read (fabio.test.codecs.test_brukerimage.TestBruker.test_read) 259s see if we can read the test image ... ok 259s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBruker.test_read 259s test_read (fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read) 259s see if we can read the test image ... ok 259s INFO:memProf:Time: 0.034s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBzipBruker.test_read 259s test_read (fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read) 259s see if we can read the test image ... ok 259s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestGzipBruker.test_read 259s test_read (fabio.test.codecs.test_brukerimage.TestRealImg.test_read) 259s check we can read bruker images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 259s ok 259s INFO:memProf:Time: 0.020s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_read 259s test_write (fabio.test.codecs.test_brukerimage.TestRealImg.test_write) 259s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Cr8F8140k103.0026.bz2') 260s ok 260s INFO:memProf:Time: 0.129s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestRealImg.test_write 260s test_linear (fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear) 260s test for self consistency of random data read/write ... WARNING:fabio.brukerimage:performing correction with slope=5.9604325e-08, offset=6.0869866e-07 (LINEAR=5.9604325e-08 6.0869866e-07) 260s ok 260s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_brukerimage.TestBrukerLinear.test_linear 260s test_conversion (fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 260s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.npy.bz2 successfully downloaded. 261s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 262s INFO:fabio.utils.ExternalResources:Image NaCl_10_01_0009.sfrm.bz2 successfully downloaded. 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testcbf.cbf.bz2') 262s INFO:fabio.utils.ExternalResources:Image testcbf.cbf.bz2 successfully downloaded. 262s ok 262s INFO:memProf:Time: 2.684s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_conversion 262s test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 262s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 262s FAIL 262s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_read 262s test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 262s check we can read bruker100 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 262s FAIL 262s INFO:memProf:Time: 0.031s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_same 262s test_split_merge (fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge) 262s Pretty challanging random example ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 262s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (65147,) overflow1 (100,) overflow2: (95,) 262s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (1577,) overflow1 (168,) overflow2: (95,) 262s INFO:fabio.test.codecs.test_bruker100image:size of underflow: (0,) overflow1 (1592,) overflow2: (1519,) 262s ok 262s INFO:memProf:Time: 0.010s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_split_merge 262s test_write (fabio.test.codecs.test_bruker100image.TestBruker100.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.npy.bz2') 262s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('NaCl_10_01_0009.sfrm.bz2') 262s ok 262s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_bruker100image.TestBruker100.test_write 262s test_read (fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read) 262s check we can read MarCCD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('corkcont2_H_0089.mccd.bz2') 263s INFO:fabio.utils.ExternalResources:Image corkcont2_H_0089.mccd.bz2 successfully downloaded. 265s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('somedata_0001.mccd.bz2') 265s ok 265s INFO:memProf:Time: 2.908s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestFlatMccds.test_read 265s test_read_openimage (fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage) ... ok 265s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mccdimage.TestNormalTiffOK.test_read_openimage 265s test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 265s Test reading of compressed OXD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 265s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 265s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 266s INFO:fabio.utils.ExternalResources:Image 100nmfilmonglass_1_1.img.bz2 successfully downloaded. 266s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 266s INFO:fabio.utils.ExternalResources:Image pilatus300k.rod_img.bz2 successfully downloaded. 267s ERROR 267s INFO:memProf:Time: 2.249s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_read 267s test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 267s Test writing with self consistency at the fabio level ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 267s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 267s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('100nmfilmonglass_1_1.img.bz2') 267s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus300k.rod_img.bz2') 267s ERROR 268s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxd.test_write 268s test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 268s test if images are actually the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1.img.bz2') 268s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('b191_1_9_1_uncompressed.img.bz2') 268s ERROR 268s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdSame.test_same 268s test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.img.bz2') 269s INFO:fabio.utils.ExternalResources:Image d80_60s.img.bz2 successfully downloaded. 274s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('d80_60s.edf.bz2') 275s INFO:fabio.utils.ExternalResources:Image d80_60s.edf.bz2 successfully downloaded. 278s ERROR 278s INFO:memProf:Time: 10.782s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestOxdBig.test_same 278s test_convert (fabio.test.codecs.test_oxdimage.TestConvert.test_convert) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('face.msk.bz2') 278s WARNING:fabio.OXDimage:Enforce TY1 compression 278s ok 278s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_oxdimage.TestConvert.test_convert 278s test_read (fabio.test.codecs.test_kcdimage.TestKcd.test_read) 278s check we can read kcd images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 279s INFO:fabio.utils.ExternalResources:Image i01f0001.kcd.bz2 successfully downloaded. 280s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 280s INFO:fabio.utils.ExternalResources:Image i01f0001.edf.bz2 successfully downloaded. 283s ok 283s INFO:memProf:Time: 4.909s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_read 283s test_same (fabio.test.codecs.test_kcdimage.TestKcd.test_same) 283s see if we can read kcd images and if they are the same as the EDF ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.kcd.bz2') 283s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('i01f0001.edf.bz2') 283s ok 283s INFO:memProf:Time: 0.204s RAM: 0.000 Mb fabio.test.codecs.test_kcdimage.TestKcd.test_same 283s test_bug502 (fabio.test.codecs.test_tifimage.TestTif.test_bug502) 283s Test the reading of a frame with wrong Photometric interpretation ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.npy') 284s INFO:fabio.utils.ExternalResources:Image frame_00017.npy.bz2 successfully downloaded. 292s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('frame_00017.tif') 293s INFO:fabio.utils.ExternalResources:Image frame_00017.tif.bz2 successfully downloaded. 301s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 301s ok 301s INFO:memProf:Time: 17.421s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_bug502 301s test_frame (fabio.test.codecs.test_tifimage.TestTif.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 302s INFO:fabio.utils.ExternalResources:Image Feb09-bright-00.300s_WAXS.bz2 successfully downloaded. 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s ok 302s INFO:memProf:Time: 1.352s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_frame 302s test_header (fabio.test.codecs.test_tifimage.TestTif.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s ok 302s INFO:memProf:Time: 0.098s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_header 302s test_read (fabio.test.codecs.test_tifimage.TestTif.test_read) 302s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.bz2') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS.gz') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Feb09-bright-00.300s_WAXS') 302s WARNING:fabio.TiffIO:Bogus StripByteCounts information 302s ok 302s INFO:memProf:Time: 0.109s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif.test_read 302s test1 (fabio.test.codecs.test_tifimage.TestGzipTif.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 302s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.tif.bz2 successfully downloaded. 303s ok 303s INFO:memProf:Time: 0.349s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestGzipTif.test1 303s test1 (fabio.test.codecs.test_tifimage.TestTif_Rect.test1) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('testmap1_0002.tif.bz2') 303s INFO:fabio.utils.ExternalResources:Image testmap1_0002.tif.bz2 successfully downloaded. 303s ok 303s INFO:memProf:Time: 0.175s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Rect.test1 303s test1 (fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1) 303s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.tif.bz2') 304s INFO:fabio.utils.ExternalResources:Image a0009.tif.bz2 successfully downloaded. 304s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('a0009.edf.bz2') 305s INFO:fabio.utils.ExternalResources:Image a0009.edf.bz2 successfully downloaded. 305s WARNING:fabio.TiffIO:Non standard TIFF. Rows per strip TAG missing 305s WARNING:fabio.TiffIO:Non standard TIFF. Strip byte counts TAG missing 305s ok 305s INFO:memProf:Time: 1.967s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_A0009.test1 305s test1 (fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1) 305s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 305s INFO:fabio.utils.ExternalResources:Image fit2d.tif.bz2 successfully downloaded. 305s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.edf.bz2') 305s INFO:fabio.utils.ExternalResources:Image fit2d.edf.bz2 successfully downloaded. 305s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 305s WARNING:fabio.edfimage:Unknown compression scheme FALSE 305s ok 305s INFO:memProf:Time: 0.290s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_fit2d.test1 305s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1) 305s Testing packbit comressed data tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.tif.bz2') 305s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('oPPA_5grains_0001.edf.bz2') 305s INFO:fabio.utils.ExternalResources:Image oPPA_5grains_0001.edf.bz2 successfully downloaded. 306s ok 306s INFO:memProf:Time: 0.532s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Packbits.test1 306s test1 (fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1) 306s Testing pilatus tif bug ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.tif.bz2') 306s INFO:fabio.utils.ExternalResources:Image pilatus2M.tif.bz2 successfully downloaded. 316s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('pilatus2M.edf.bz2') 317s INFO:fabio.utils.ExternalResources:Image pilatus2M.edf.bz2 successfully downloaded. 327s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 327s ok 327s INFO:memProf:Time: 21.638s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTifImage_Pilatus.test1 327s test_pil (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 327s INFO:fabio.utils.ExternalResources:Image indexed_color.tif.bz2 successfully downloaded. 328s ok 328s INFO:memProf:Time: 0.225s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_pil 328s test_tiffio (fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('indexed_color.tif.bz2') 328s WARNING:fabio.tifimage:Third dimension is the color 328s WARNING:fabio.tifimage:Third dimension is the color 328s WARNING:fabio.tifimage:Third dimension is the color 328s ok 328s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_Colormap.test_tiffio 329s test_all_images (fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images) ... INFO:fabio.utils.ExternalResources:Image libtiffpic.tar.gz successfully downloaded. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-04.tif: no tiff reader managed to read the file. 329s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with TiffIO due to could not broadcast input array from shape (10,640,3) into shape (15,640,3), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif with PIL: image file is truncated (1280 bytes not processed) 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/dscf0013.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-10.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Third dimension is the color 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-12.tif: no tiff reader managed to read the file. 329s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv32.tif: no tiff reader managed to read the file. 329s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_l16.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/zackthecat.tif with TiffIO due to 273 is not in list, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with TiffIO due to Unsupported number of bits for unsigned int: (10, 10, 10), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-10.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-14.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-08.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 329s WARNING:fabio.tifimage:Third dimension is the color 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with TiffIO due to Unsupported number of bits for unsigned int: (12, 12, 12), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-12.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 329s WARNING:fabio.tifimage:Third dimension is the color 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ycbcr-cat.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with TiffIO due to Unsupported number of bits for unsigned int: (14, 14, 14), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-14.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with TiffIO due to Unsupported number of bits for unsigned int: 6, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-06.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/fax2d.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with TiffIO due to Unsupported number of bits for unsigned int: 10, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-10.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-16.tif with TiffIO due to cannot reshape array of size 3139 into shape (73,3), trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/strike.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with TiffIO due to Unsupported number of bits for unsigned int: 12, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-12.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with TiffIO due to cannot reshape array of size 65536 into shape (800), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif with PIL: image file is truncated (126 bytes not processed) 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/cramps-tile.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-24.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/text.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s ThunderDecode: Not enough data at scanline 320 (0 != 1512). 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/smallliz.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/g3test.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with TiffIO due to Unsupported number of bits for unsigned int: 14, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-14.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/oxford.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-08.tif with TiffIO due to Unsupported number of bits for unsigned int: (8, 8, 8, 8), trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-tile.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-lzw.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with TiffIO due to %d format: a real number is required, not bytes, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-24.tif: no tiff reader managed to read the file. 329s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-contig-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/jim___ah.tif with TiffIO due to Unsupported number of bits for unsigned int: 1, trying PIL 329s WARNING:fabio.tifimage:Third dimension is the color 329s WARNING:fabio.tifimage:Third dimension is the color 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-02.tif with TiffIO due to Unsupported number of bits for unsigned int: 2, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/caspian.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-02.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Third dimension is the color 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-palette-04.tif with TiffIO due to Unsupported number of bits for unsigned int: 4, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with TiffIO due to Unsupported number of bits for unsigned int: 24, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-minisblack-24.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with TiffIO due to Unsupported number of bits for unsigned int: (4, 4, 4), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-contig-04.tif: no tiff reader managed to read the file. 329s WARNING:fabio.TiffIO:Data at tag id '37439' is smaller than expected 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/off_luv24.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/ladoga.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.TiffIO:Only grayscale and RGB images supported 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-separated-planar-16.tif with TiffIO due to Unsupported number of bits for unsigned int: (16, 16, 16, 16), trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/quad-jpeg.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with TiffIO due to Unsupported number of bits for unsigned int: (2, 2, 2), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-02.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with TiffIO due to cannot reshape array of size 2044 into shape (73,3), trying PIL 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif with PIL: cannot identify image file 329s ERROR:fabio.tifimage:Error in opening /tmp/fabio_testdata_ubuntu/libtiffpic.tar.gz__content/depth/flower-rgb-planar-32.tif: no tiff reader managed to read the file. 329s WARNING:fabio.tifimage:Third dimension is the color 329s ok 329s INFO:memProf:Time: 1.172s RAM: 0.000 Mb fabio.test.codecs.test_tifimage.TestTif_LibTiffPic.test_all_images 329s test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 329s Tests that 2 matrixes are invert ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 329s INFO:fabio.utils.ExternalResources:Image XSDataImage.edf.bz2 successfully downloaded. 330s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 331s INFO:fabio.utils.ExternalResources:Image XSDataImage.xml.bz2 successfully downloaded. 331s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 332s INFO:fabio.utils.ExternalResources:Image XSDataImageInv.xml.bz2 successfully downloaded. 332s ERROR 332s INFO:memProf:Time: 3.209s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_invert 332s test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 332s Test reading of XSD images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 332s ERROR 332s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_read 332s test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 332s test if an image is the same as the EDF equivalent ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.edf.bz2') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImage.xml.bz2') 332s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('XSDataImageInv.xml.bz2') 332s ERROR 332s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_xsdimage.TestXSD.test_same 332s test_memoryleak (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak) 332s This test takes a lot of time, so only in debug mode. ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 333s INFO:fabio.utils.ExternalResources:Image mgzn-20hpt.img.bz2 successfully downloaded. 333s ok 333s INFO:memProf:Time: 1.472s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_memoryleak 333s test_read (fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read) 333s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mgzn-20hpt.img.bz2') 334s ok 334s INFO:memProf:Time: 0.456s RAM: 0.000 Mb fabio.test.codecs.test_raxisimage.TestRaxisImage.test_read 334s test_read (fabio.test.codecs.test_pnmimage.TestPNM.test_read) 334s check we can read pnm images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 334s INFO:fabio.utils.ExternalResources:Image image0001.pgm.bz2 successfully downloaded. 334s ok 334s INFO:memProf:Time: 0.214s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_read 334s test_write (fabio.test.codecs.test_pnmimage.TestPNM.test_write) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('image0001.pgm.bz2') 334s ok 334s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_pnmimage.TestPNM.test_write 334s test_multidim (fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim) ... ok 334s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_multidim 334s test_read (fabio.test.codecs.test_numpyimage.TestNumpy.test_read) 334s check we can read pnm images ... ok 334s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_read 334s test_write (fabio.test.codecs.test_numpyimage.TestNumpy.test_write) 334s check we can write numpy images ... ok 334s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_numpyimage.TestNumpy.test_write 334s test_frame (fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 335s INFO:fabio.utils.ExternalResources:Image lysb_5mg-1.90s_SAXS.bz2 successfully downloaded. 336s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 336s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 337s ok 337s INFO:memProf:Time: 2.491s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_frame 337s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 337s ok 337s INFO:memProf:Time: 0.030s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_header 337s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus.test_read) 337s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.bz2') 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS.gz') 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('lysb_5mg-1.90s_SAXS') 337s ok 337s INFO:memProf:Time: 0.029s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus.test_read 337s test_header (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 337s INFO:fabio.utils.ExternalResources:Image Pilatus1M.tif.bz2 successfully downloaded. 337s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 337s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 338s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 338s ok 338s INFO:memProf:Time: 0.940s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_header 338s test_read (fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read) 338s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif.bz2') 338s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 338s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.tif') 338s WARNING:fabio.tifimage:Unable to read /tmp/fabio_testdata_ubuntu/Pilatus1M.tif with TiffIO due to Compressed TIFF images not supported except packbits, trying PIL 338s ok 338s INFO:memProf:Time: 0.067s RAM: 0.000 Mb fabio.test.codecs.test_pilatusimage.TestPilatus1M.test_read 338s test_bug_479 (fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479) ... ok 338s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_bug_479 338s test_frames_abort_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration) ... ok 338s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_abort_iteration 338s test_frames_full_iteration (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration) ... ok 338s INFO:memProf:Time: 0.005s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_full_iteration 338s test_frames_random_access (fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access) ... ok 338s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_frames_random_access 338s test_open (fabio.test.codecs.test_eigerimage.TestEiger.test_open) 338s check we can read images from Eiger ... ok 338s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_open 338s test_read (fabio.test.codecs.test_eigerimage.TestEiger.test_read) 338s check we can read images from Eiger ... ok 338s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_read 338s test_write (fabio.test.codecs.test_eigerimage.TestEiger.test_write) ... ok 338s INFO:memProf:Time: 0.006s RAM: 0.000 Mb fabio.test.codecs.test_eigerimage.TestEiger.test_write 338s test_iterate (fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate) ... ok 338s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_iterate 338s test_next_frames (fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames) 338s check the legacy next API ... ok 338s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_next_frames 338s test_open (fabio.test.codecs.test_hdf5image.TestHdf5.test_open) 338s check we can read images from Eiger ... ok 338s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_open 338s test_read (fabio.test.codecs.test_hdf5image.TestHdf5.test_read) 338s check we can read images from Eiger ... ok 338s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_hdf5image.TestHdf5.test_read 338s test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 338s INFO:fabio.utils.ExternalResources:Image fit2d.f2d.bz2 successfully downloaded. 338s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 338s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.f2d.bz2') 339s INFO:fabio.utils.ExternalResources:Image Pilatus1M.f2d.bz2 successfully downloaded. 342s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf.bz2') 342s INFO:fabio.utils.ExternalResources:Image Pilatus1M.cbf.bz2 successfully downloaded. 343s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.msk.bz2') 343s INFO:fabio.utils.ExternalResources:Image Pilatus1M.msk.bz2 successfully downloaded. 343s FAIL 343s INFO:memProf:Time: 5.143s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask 343s test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 343s test edf and msk are the same ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 343s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 343s WARNING:fabio.TiffIO:TIFF file tag 270 contains non ASCII/UTF-8 characters. 343s FAIL 343s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match 343s test_read (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read) 343s Check it reads a mask OK ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.f2d.bz2') 343s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('fit2d.tif.bz2') 343s ok 343s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_read 343s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2.SPE.bz2') 343s INFO:fabio.utils.ExternalResources:Image v2.SPE.bz2 successfully downloaded. 344s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v2_converted.SPE.bz2') 344s INFO:fabio.utils.ExternalResources:Image v2_converted.SPE.bz2 successfully downloaded. 344s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3.spe.bz2') 345s INFO:fabio.utils.ExternalResources:Image v3.spe.bz2 successfully downloaded. 345s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_custom_roi.spe.bz2') 345s INFO:fabio.utils.ExternalResources:Image v3_custom_roi.spe.bz2 successfully downloaded. 345s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('v3_2frames.spe.bz2') 346s INFO:fabio.utils.ExternalResources:Image v3_2frames.spe.bz2 successfully downloaded. 349s test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) ... ERROR 349s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_calibration 349s test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) ... ERROR 349s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength 349s test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) ... ERROR 349s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_detector 349s test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) ... ERROR 349s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time 349s test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) ... ERROR 349s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration 349s test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) ... ERROR 349s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_grating 349s test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) ... ERROR 349s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames 349s test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) ... ERROR 349s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_read_data 349s test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) ... ERROR 349s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe 349s test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) ... ERROR 349s INFO:memProf:Time: 0.016s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_roi 349s test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) ... ERROR 349s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_speimage.TestSpeImage.test_time 349s test_read_empty_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file) ... ok 349s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_empty_file 349s test_read_failing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 350s INFO:fabio.utils.ExternalResources:Image rand_uint8.jpg.bz2 successfully downloaded. 350s ok 350s INFO:memProf:Time: 0.158s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_failing_file 350s test_read_missing_file (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file) ... ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_missing_file 350s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 350s ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImage.test_read_uint8 350s test_read_uint8 (fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 350s ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestJpegImageInsideFabio.test_read_uint8 350s test_with_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 350s ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_with_pil 350s test_without_pil (fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('rand_uint8.jpg.bz2') 350s ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpegimage.TestPilNotAvailable.test_without_pil 350s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file) ... ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_missing_file 350s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 350s INFO:fabio.utils.ExternalResources:Image binned_data_uint16.jp2.bz2 successfully downloaded. 350s ok 350s INFO:memProf:Time: 0.229s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint16 350s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 350s INFO:fabio.utils.ExternalResources:Image binned_data_uint8.jp2.bz2 successfully downloaded. 350s ok 350s INFO:memProf:Time: 0.231s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_uint8 350s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 350s ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage.test_open_wrong_format 350s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file) ... ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_missing_file 350s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 350s ok 350s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint16 350s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 350s ok 350s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_uint8 350s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 350s ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_PIL.test_open_wrong_format 350s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file) ... skipped 'glymur is not available or too old' 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_missing_file 350s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16) ... skipped 'glymur is not available or too old' 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint16 350s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8) ... skipped 'glymur is not available or too old' 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_uint8 350s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format) ... skipped 'glymur is not available or too old' 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_glymur.test_open_wrong_format 350s test_open_missing_file (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file) ... ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_missing_file 350s test_open_uint16 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint16.jp2.bz2') 350s ok 350s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint16 350s test_open_uint8 (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('binned_data_uint8.jp2.bz2') 350s ok 350s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_uint8 350s test_open_wrong_format (fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('MultiFrame.edf.bz2') 350s ok 350s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_jpeg2kimage.TestJpeg2KImage_fabio.test_open_wrong_format 350s test_read (fabio.test.codecs.test_mpaimage.TestMpa.test_read) 350s Test the reading of multiwire images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('mpa_test.mpa.bz2') 351s INFO:fabio.utils.ExternalResources:Image mpa_test.mpa.bz2 successfully downloaded. 353s ok 353s INFO:memProf:Time: 2.753s RAM: 0.000 Mb fabio.test.codecs.test_mpaimage.TestMpa.test_read 353s test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 353s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('ref_d20x_310mm.dm3.bz2') 354s INFO:fabio.utils.ExternalResources:Image ref_d20x_310mm.dm3.bz2 successfully downloaded. 356s ERROR 356s INFO:memProf:Time: 3.052s RAM: 0.000 Mb fabio.test.codecs.test_dm3image.TestDm3Image.test_read 356s test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 356s check we can read mrc images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 356s INFO:fabio.utils.ExternalResources:Image EMD-3001.map.bz2 successfully downloaded. 356s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 357s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.mrc.bz2 successfully downloaded. 379s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 380s INFO:fabio.utils.ExternalResources:Image EMD-3001.npy.bz2 successfully downloaded. 380s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 381s INFO:fabio.utils.ExternalResources:Image 0p67_5s_0000.npy.bz2 successfully downloaded. 404s INFO:fabio.mrcimage:Expected 'MAP ', got ERROR:fabio.test.codecs.test_mrcimage:unable to read: /tmp/fabio_testdata_ubuntu/EMD-3001.map 404s ERROR 404s INFO:memProf:Time: 47.639s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_read 404s test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 404s see if we can read mrc images and if they are the same as the numpy dump ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.map.bz2') 404s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.mrc.bz2') 404s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('EMD-3001.npy.bz2') 404s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('0p67_5s_0000.npy.bz2') 404s INFO:fabio.test.codecs.test_mrcimage:Comparing files EMD-3001.map and EMD-3001.npy 404s INFO:fabio.mrcimage:Expected 'MAP ', got ERROR 404s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_mrcimage.TestMrc.test_same 404s test_file_series (fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series) ... ok 404s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_file_series 404s test_frames_abort_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration) ... ok 404s INFO:memProf:Time: 0.004s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_abort_iteration 404s test_frames_full_iteration (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration) ... ok 404s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_full_iteration 404s test_frames_random_access (fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access) ... ok 404s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_frames_random_access 404s test_multi_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame) ... ok 404s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_multi_frame 404s test_single_frame (fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame) ... ok 404s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_pixiimage.TestPixiImage.test_single_frame 404s test_data (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data) ... INFO:fabio.esperantoimage:Esperanto accepts only integer data, rounding 404s INFO:fabio.esperantoimage:Padding image to be square, multiple of 4 and of size between 256 and 4096 404s ok 404s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_data 404s test_header (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 405s INFO:fabio.utils.ExternalResources:Image sucrose_1s__1_1.esperanto.bz2 successfully downloaded. 406s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_w2n1tdb1_ubuntu/4bytes_long.esperanto 406s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_w2n1tdb1_ubuntu/agi_bitfield.esperanto 408s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 408s INFO:fabio.utils.ExternalResources:Image reference.esperanto.bz2 successfully downloaded. 408s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_w2n1tdb1_ubuntu/4bytes_long.esperanto 408s INFO:fabio.test.codecs.test_esperantoimage:Saving tmp file to /tmp/fabio_w2n1tdb1_ubuntu/agi_bitfield.esperanto 408s ok 408s INFO:memProf:Time: 4.354s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_header 408s test_read (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read) 408s Test the reading of Mar345 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('sucrose_1s__1_1.esperanto.bz2') 409s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 409s ok 409s INFO:memProf:Time: 1.372s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_read 409s test_values (fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.esperanto.bz2') 409s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('reference.npy.bz2') 410s INFO:fabio.utils.ExternalResources:Image reference.npy.bz2 successfully downloaded. 410s ok 410s INFO:memProf:Time: 0.582s RAM: 0.000 Mb fabio.test.codecs.test_esperantoimage.TestEsperanto.test_values 410s test_frames_abort_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration) ... ok 410s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_abort_iteration 410s test_frames_full_iteration (fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration) ... ok 410s INFO:memProf:Time: 0.002s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_full_iteration 410s test_frames_random_access (fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access) ... ok 410s INFO:memProf:Time: 0.003s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_frames_random_access 410s test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('output_sparse_0_00000.h5') 411s INFO:fabio.utils.ExternalResources:Image output_sparse_0_00000.h5.bz2 successfully downloaded. 413s WARNING:fabio.sparseimage:Unable to read configuration of sparsification: 413s : 'Unable to synchronously open object (component not found)' 413s ERROR 413s INFO:memProf:Time: 2.656s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_identify 413s test_open (fabio.test.codecs.test_limaimage.TestLima.test_open) 413s test_open check we can read images from Lima ... ok 413s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_open 413s test_read (fabio.test.codecs.test_limaimage.TestLima.test_read) 413s test_read check we can read images from Lima ... ok 413s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_read 413s test_write (fabio.test.codecs.test_limaimage.TestLima.test_write) ... ok 413s INFO:memProf:Time: 0.008s RAM: 0.000 Mb fabio.test.codecs.test_limaimage.TestLima.test_write 413s test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 413s check we can read dm3 images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Radiograph_SP8_BL47XU_HiPicimage.img.bz2') 414s INFO:fabio.utils.ExternalResources:Image Radiograph_SP8_BL47XU_HiPicimage.img.bz2 successfully downloaded. 414s ERROR 414s INFO:memProf:Time: 1.769s RAM: 0.000 Mb fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read 414s test_read (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read) 414s check we can read images from Eiger ... /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 414s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 414s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.bz2 rb 414s /tmp/fabio_testdata_ubuntu/GE_aSI_detector_image_1529.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.bz2 rb 414s /tmp/fabio_testdata_ubuntu/corkcont2_H_0089.mccd.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.bz2 rb 414s /tmp/fabio_testdata_ubuntu/somedata_0001.mccd.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 414s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 414s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.bz2 rb 414s /tmp/fabio_testdata_ubuntu/Feb09-bright-00.300s_WAXS.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/testmap1_0002.tif.bz2 rb 414s /tmp/fabio_testdata_ubuntu/fit2d.tif.bz2 rb 414s /tmp/fabio_testdata_ubuntu/oPPA_5grains_0001.tif.bz2 rb 414s /tmp/fabio_testdata_ubuntu/pilatus2M.tif.bz2 rb 414s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 414s /tmp/fabio_testdata_ubuntu/indexed_color.tif.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/indexed_color.tif.bz2 rb 414s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 414s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 414s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.bz2 rb 414s /tmp/fabio_testdata_ubuntu/lysb_5mg-1.90s_SAXS.gz rb fabio. 414s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 414s /tmp/fabio_testdata_ubuntu/Pilatus1M.tif.bz2 rb 414s 0 414s 1 414s 2 414s 3 414s 4 414s 5 414s 6 414s 7 414s 8 414s 9 414s 10 414s 11 414s 12 414s 13 414s 14 414s 15 414s 16 414s 17 414s 18 414s 19 414s 20 414s 21 414s 22 414s 23 414s 24 414s 25 414s 26 414s 27 414s 28 414s 29 414s 30 414s 31 414s 32 414s 33 414s 34 414s 35 414s 36 414s 37 414s 38 414s 39 414s 40 414s 41 414s 42 414s 43 414s 44 414s 45 414s 46 414s 47 414s 48 414s 49 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s jpeg2kimage.PIL: 414s /tmp/fabio_w2n1tdb1_ubuntu/lima3d.h5 414s ok 414s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_read 414s test_write (fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write) ... ok 414s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.codecs.test_binaryimage.TestBinaryImage.test_write 414s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0001.ccd') 414s /tmp/fabio_w2n1tdb1_ubuntu/binary.npyINFO:fabio.utils.ExternalResources:Image scan0001.ccd.bz2 successfully downloaded. 414s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0005.ccd') 415s INFO:fabio.utils.ExternalResources:Image scan0005.ccd.bz2 successfully downloaded. 415s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0050.ccd') 415s INFO:fabio.utils.ExternalResources:Image scan0050.ccd.bz2 successfully downloaded. 415s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0059.ccd') 415s INFO:fabio.utils.ExternalResources:Image scan0059.ccd.bz2 successfully downloaded. 415s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('scan0066.ccd') 415s INFO:fabio.utils.ExternalResources:Image scan0066.ccd.bz2 successfully downloaded. 415s test_parse (fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse) ... ok 415s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.TestCcdCharacteristiscs.test_parse 415s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('Pilatus1M.cbf') 415s test_decomposition (fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition) ... WARNING:fabio.test.codecs.test_xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 415s WARNING:fabio.xcaliburimage:PyFAI not available: only a coarse description of the mask is provided 415s ok 415s INFO:memProf:Time: 0.007s RAM: 0.000 Mb fabio.test.codecs.test_xcaliburimage.testXcalibureImage.test_decomposition 415s test_read (fabio.test.codecs.test_lambdaimage.TestLambda.test_read) 415s Test the reading of lambda images ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_m01.nxs') 416s INFO:fabio.utils.ExternalResources:Image l1_test02_00002_m01.nxs.bz2 successfully downloaded. 416s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_m02.nxs') 417s INFO:fabio.utils.ExternalResources:Image l1_test02_00002_m02.nxs.bz2 successfully downloaded. 418s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_m03.nxs') 419s INFO:fabio.utils.ExternalResources:Image l1_test02_00002_m03.nxs.bz2 successfully downloaded. 419s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_master.nxs') 419s INFO:fabio.utils.ExternalResources:Image l1_test02_00002_master.nxs.bz2 successfully downloaded. 419s ok 419s INFO:memProf:Time: 3.791s RAM: 0.000 Mb fabio.test.codecs.test_lambdaimage.TestLambda.test_read 419s test_write (fabio.test.codecs.test_lambdaimage.TestLambda.test_write) 419s read file using fabio.open and save and reopen ... check consistency ... INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_m01.nxs') 419s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_m02.nxs') 419s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_m03.nxs') 419s INFO:fabio.utils.ExternalResources:UtilsTest.getimage('l1_test02_00002_master.nxs') 419s ok 419s INFO:memProf:Time: 0.276s RAM: 0.000 Mb fabio.test.codecs.test_lambdaimage.TestLambda.test_write 419s test_compress_decode_field_overflow (fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decode_field_overflow 419s test_compress_decompress_field_small (fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_compress_decompress_field_small 419s test_full_compress_decompress_field (fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_full_compress_decompress_field 419s test_get_fieldsize (fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_get_fieldsize 419s test_mask_conv (fabio.test.test_agi_bitfield.TestUtil.test_mask_conv) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestUtil.test_mask_conv 419s test_compress_row_small (fabio.test.test_agi_bitfield.TestRow.test_compress_row_small) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_small 419s test_compress_row_zero (fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestRow.test_compress_row_zero 419s test_full_rand (fabio.test.test_agi_bitfield.TestCompression.test_full_rand) ... ok 419s INFO:memProf:Time: 0.051s RAM: 0.000 Mb fabio.test.test_agi_bitfield.TestCompression.test_full_rand 419s test_cython (fabio.test.test_densification.TestDensification.test_cython) ... 419s speed-up: 17.356566678226415 419s ##### 0 419s ##### 1 419s ##### 2 419s ##### 3 419s ##### 4 419s ##### 5 419s ##### 6 419s ##### 7 419s aaa [ ] 7% toto aaa [■■■■■■ ] 70% toto aaa [■■■■■■■■■■] 132% toto ok 419s INFO:memProf:Time: 0.104s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_cython 419s test_rng_normal (fabio.test.test_densification.TestDensification.test_rng_normal) ... ok 419s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_normal 419s test_rng_uniform (fabio.test.test_densification.TestDensification.test_rng_uniform) ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_densification.TestDensification.test_rng_uniform 419s setUpClass (fabio.test.test_io_limits.TestEdf) ... skipped 'test requires debug level logging' 419s setUpClass (fabio.test.test_io_limits.TestTiff) ... skipped 'test requires debug level logging' 419s test_coverage (fabio.test.test_utils_cli.TestUtilShell.test_coverage) 419s test function coverage ... ok 419s INFO:memProf:Time: 0.000s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_coverage 419s test_expand_args (fabio.test.test_utils_cli.TestUtilShell.test_expand_args) ... ok 419s INFO:memProf:Time: 0.001s RAM: 0.000 Mb fabio.test.test_utils_cli.TestUtilShell.test_expand_args 419s test_import_all (fabio.test.test_import.TestImport.test_import_all) ... ERROR:eiger2crysalis:Numexpr is needed to interpret formula ... 420s ERROR:hdf2neggia:Unable to import pyFAI, won't be able to parse PONI-file! 420s INFO:fabio.app._qt:PySide.QtOpenGL not available 420s INFO:fabio.app._qt:PyQt5.QtSvg not available 420s INFO:matplotlib.font_manager:generated new fontManager 420s ERROR:eiger2cbf:Numexpr is needed to interpret formula ... 420s ok 420s INFO:memProf:Time: 0.699s RAM: 0.000 Mb fabio.test.test_import.TestImport.test_import_all 420s 420s ====================================================================== 420s ERROR: testpil (fabio.test.test_fabio_image.TestPilImage2.testpil) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 208, in testpil 420s testdata = self.mkdata(shape, typ) 420s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 236, in mkdata 420s maxi = numpy.iinfo(numpy.integer).max 420s ~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/numpy/_core/getlimits.py", line 707, in __init__ 420s raise ValueError(f"Invalid integer data type {self.kind!r}.") 420s ValueError: Invalid integer data type 'O'. 420s 420s ====================================================================== 420s ERROR: testpil (fabio.test.test_fabio_image.TestPilImage3.testpil) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 208, in testpil 420s testdata = self.mkdata(shape, typ) 420s File "/usr/lib/python3/dist-packages/fabio/test/test_fabio_image.py", line 248, in mkdata 420s maxi = numpy.iinfo(numpy.integer).max 420s ~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/numpy/_core/getlimits.py", line 707, in __init__ 420s raise ValueError(f"Invalid integer data type {self.kind!r}.") 420s ValueError: Invalid integer data type 'O'. 420s 420s ====================================================================== 420s ERROR: testOxd (fabio.test.test_open_image.TestOpenOxd.testOxd) 420s openimage opening adsc 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 212, in testOxd 420s self.checkFile(filename) 420s ~~~~~~~~~~~~~~^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 201, in checkFile 420s obj = openimage(filename) 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 241, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 171, in _readheader 420s start_angles_step.byteswap(True) 420s ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: testOxdUnc (fabio.test.test_open_image.TestOpenOxd.testOxdUnc) 420s openimage opening adsc 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 218, in testOxdUnc 420s self.checkFile(filename) 420s ~~~~~~~~~~~~~~^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/test/test_open_image.py", line 201, in checkFile 420s obj = openimage(filename) 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 241, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 171, in _readheader 420s start_angles_step.byteswap(True) 420s ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_read (fabio.test.codecs.test_oxdimage.TestOxd.test_read) 420s Test reading of compressed OXD images 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_oxdimage.py", line 80, in test_read 420s obj.read(self.fn[name]) 420s ~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 241, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 171, in _readheader 420s start_angles_step.byteswap(True) 420s ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_write (fabio.test.codecs.test_oxdimage.TestOxd.test_write) 420s Test writing with self consistency at the fabio level 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_oxdimage.py", line 96, in test_write 420s obj.read(self.fn[name]) 420s ~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 241, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 171, in _readheader 420s start_angles_step.byteswap(True) 420s ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_same (fabio.test.codecs.test_oxdimage.TestOxdSame.test_same) 420s test if images are actually the same 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_oxdimage.py", line 128, in test_same 420s o1 = fabio.open(self.fn["b191_1_9_1.img"]) 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 241, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 171, in _readheader 420s start_angles_step.byteswap(True) 420s ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_same (fabio.test.codecs.test_oxdimage.TestOxdBig.test_same) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_oxdimage.py", line 151, in test_same 420s df = [fabio.open(i).data for i in self.fn.values()] 420s ~~~~~~~~~~^^^ 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 241, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/OXDimage.py", line 171, in _readheader 420s start_angles_step.byteswap(True) 420s ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_invert (fabio.test.codecs.test_xsdimage.TestXSD.test_invert) 420s Tests that 2 matrixes are invert 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_xsdimage.py", line 85, in test_invert 420s m1 = fabio.open(self.fn["XSDataImage.xml"]) 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/xsdimage.py", line 118, in read 420s self.data.byteswap(inplace=True) 420s ~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_read (fabio.test.codecs.test_xsdimage.TestXSD.test_read) 420s Test reading of XSD images 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_xsdimage.py", line 68, in test_read 420s obj.read(self.fn[name]) 420s ~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/xsdimage.py", line 118, in read 420s self.data.byteswap(inplace=True) 420s ~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_same (fabio.test.codecs.test_xsdimage.TestXSD.test_same) 420s test if an image is the same as the EDF equivalent 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_xsdimage.py", line 79, in test_same 420s xsd = fabio.open(self.fn["XSDataImage.xml"]) 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/xsdimage.py", line 118, in read 420s self.data.byteswap(inplace=True) 420s ~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^ 420s ValueError: array to be byte-swapped is read-only 420s 420s ====================================================================== 420s ERROR: test_calibration (fabio.test.codecs.test_speimage.TestSpeImage.test_calibration) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_center_wavelength (fabio.test.codecs.test_speimage.TestSpeImage.test_center_wavelength) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_detector (fabio.test.codecs.test_speimage.TestSpeImage.test_detector) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_exposure_time (fabio.test.codecs.test_speimage.TestSpeImage.test_exposure_time) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_fabio_integration (fabio.test.codecs.test_speimage.TestSpeImage.test_fabio_integration) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_grating (fabio.test.codecs.test_speimage.TestSpeImage.test_grating) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_multiple_frames (fabio.test.codecs.test_speimage.TestSpeImage.test_multiple_frames) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_read_data (fabio.test.codecs.test_speimage.TestSpeImage.test_read_data) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_reading_version2_spe (fabio.test.codecs.test_speimage.TestSpeImage.test_reading_version2_spe) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_roi (fabio.test.codecs.test_speimage.TestSpeImage.test_roi) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_time (fabio.test.codecs.test_speimage.TestSpeImage.test_time) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_speimage.py", line 65, in setUp 420s self.v2_spe_file.read(self.v2_spe_filename) 420s ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 117, in read 420s self.data = self._read_data(infile, frame) 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/speimage.py", line 287, in _read_data 420s raise RuntimeError("Unsuported data type: %s" % self.header['data_type']) 420s RuntimeError: Unsuported data type: 256 420s 420s ====================================================================== 420s ERROR: test_read (fabio.test.codecs.test_dm3image.TestDm3Image.test_read) 420s check we can read dm3 images 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_dm3image.py", line 73, in test_read 420s obj1.read(fname) 420s ~~~~~~~~~^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/dm3image.py", line 121, in read 420s self.read_tag_entry() 420s ~~~~~~~~~~~~~~~~~~~^^ 420s File "/usr/lib/python3/dist-packages/fabio/dm3image.py", line 182, in read_tag_entry 420s value = self.read_tag_type() 420s File "/usr/lib/python3/dist-packages/fabio/dm3image.py", line 192, in read_tag_type 420s raise IOError 420s OSError 420s 420s ====================================================================== 420s ERROR: test_read (fabio.test.codecs.test_mrcimage.TestMrc.test_read) 420s check we can read mrc images 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_mrcimage.py", line 75, in test_read 420s raise err 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_mrcimage.py", line 72, in test_read 420s obj = openimage(filename) 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/mrcimage.py", line 127, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/mrcimage.py", line 110, in _readheader 420s raise IOError("Mode %s unsupported" % mode) 420s OSError: Mode 33554432 unsupported 420s 420s ====================================================================== 420s ERROR: test_same (fabio.test.codecs.test_mrcimage.TestMrc.test_same) 420s see if we can read mrc images and if they are the same as the numpy dump 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_mrcimage.py", line 87, in test_same 420s mrc.read(self.fn[mrcfilename]) 420s ~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/mrcimage.py", line 127, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/mrcimage.py", line 110, in _readheader 420s raise IOError("Mode %s unsupported" % mode) 420s OSError: Mode 33554432 unsupported 420s 420s ====================================================================== 420s ERROR: test_identify (fabio.test.codecs.test_limaimage.TestLima.test_identify) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_limaimage.py", line 123, in test_identify 420s res = openimage(fn) 420s File "/usr/lib/python3/dist-packages/fabio/openimage.py", line 213, in openimage 420s obj = obj.read(obj.filename, frame) 420s File "/usr/lib/python3/dist-packages/fabio/sparseimage.py", line 228, in read 420s self.data = self._generate_data(self.currentframe) 420s ~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/sparseimage.py", line 272, in _generate_data 420s dense = cython_densify.densify(self.mask, 420s self.radius, 420s ...<5 lines>... 420s self.background_std[index] * self.noisy if self.noisy else None, 420s self.normalization) 420s File "dense.pyx", line 225, in fabio.ext.dense.densify 420s ValueError: Little-endian buffer not supported on big-endian compiler 420s 420s ====================================================================== 420s ERROR: test_read (fabio.test.codecs.test_hipicimage.TestHiPiCImage.test_read) 420s check we can read dm3 images 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_hipicimage.py", line 67, in test_read 420s obj1.read(fname) 420s ~~~~~~~~~^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/HiPiCimage.py", line 102, in read 420s self._readheader(infile) 420s ~~~~~~~~~~~~~~~~^^^^^^^^ 420s File "/usr/lib/python3/dist-packages/fabio/HiPiCimage.py", line 70, in _readheader 420s Comment = Comment.decode() 420s UnicodeDecodeError: 'utf-8' codec can't decode byte 0x9c in position 10180: invalid start byte 420s 420s ====================================================================== 420s FAIL: test_read (fabio.test.codecs.test_bruker100image.TestBruker100.test_read) 420s check we can read bruker100 images 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_bruker100image.py", line 73, in test_read 420s self.assertAlmostEqual(mini, obj.getmin(), 2, "getmin") 420s ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 420s AssertionError: -30.0 != np.int32(-486539265) within 2 places (np.float64(486539235.0) difference) : getmin 420s 420s ====================================================================== 420s FAIL: test_same (fabio.test.codecs.test_bruker100image.TestBruker100.test_same) 420s check we can read bruker100 images 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_bruker100image.py", line 84, in test_same 420s self.assertTrue(abs(ref.data - obt.data).max() == 0, "data are the same") 420s ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 420s AssertionError: np.False_ is not true : data are the same 420s 420s ====================================================================== 420s FAIL: test_mask (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_mask) 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_fit2dimage.py", line 81, in test_mask 420s self.assertEqual(diff.sum(), 0) 420s ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^ 420s AssertionError: np.int64(464094281) != 0 420s 420s ====================================================================== 420s FAIL: test_match (fabio.test.codecs.test_fit2dimage.TestFit2DImage.test_match) 420s test edf and msk are the same 420s ---------------------------------------------------------------------- 420s Traceback (most recent call last): 420s File "/usr/lib/python3/dist-packages/fabio/test/codecs/test_fit2dimage.py", line 74, in test_match 420s self.assertEqual(sumd, 0) 420s ~~~~~~~~~~~~~~~~^^^^^^^^^ 420s AssertionError: np.float64(505548.0) != 0 420s 420s ---------------------------------------------------------------------- 420s Ran 361 tests in 304.713s 420s 420s FAILED (failures=4, errors=27, skipped=7) 421s autopkgtest [04:01:22]: test command1: -----------------------] 421s autopkgtest [04:01:22]: test command1: - - - - - - - - - - results - - - - - - - - - - 421s command1 FAIL non-zero exit status 1 422s autopkgtest [04:01:23]: @@@@@@@@@@@@@@@@@@@@ summary 422s command1 FAIL non-zero exit status 1