0s autopkgtest [16:17:41]: starting date and time: 2025-10-20 16:17:41+0000 0s autopkgtest [16:17:41]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [16:17:41]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yj7e7bbb/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:python-pluggy --apt-upgrade mdanalysis --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.4.2-1 python-pluggy/1.6.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-3.secgroup --name adt-resolute-s390x-mdanalysis-20251020-161741-juju-7f2275-prod-proposed-migration-environment-20-681691bf-03dc-45af-9785-4b2707ebf80e --image adt/ubuntu-resolute-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-s390x-mdanalysis-20251020-161741-juju-7f2275-prod-proposed-migration-environment-20-681691bf-03dc-45af-9785-4b2707ebf80e from image adt/ubuntu-resolute-s390x-server-20251020.img (UUID af6042e7-5f94-4102-8fd4-5557e2338897)... 43s autopkgtest [16:18:24]: testbed dpkg architecture: s390x 43s autopkgtest [16:18:24]: testbed apt version: 3.1.8ubuntu1 44s autopkgtest [16:18:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 44s autopkgtest [16:18:25]: testbed release detected to be: None 44s autopkgtest [16:18:25]: updating testbed package index (apt update) 45s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 45s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 45s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 45s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 45s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 45s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [14.3 kB] 45s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [646 kB] 46s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [56.9 kB] 46s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x Packages [107 kB] 46s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted s390x Packages [940 B] 46s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe s390x Packages [400 kB] 46s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse s390x Packages [3812 B] 46s Fetched 1318 kB in 1s (1108 kB/s) 46s Reading package lists... 47s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 47s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 47s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 47s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 48s Reading package lists... 48s Reading package lists... 48s Building dependency tree... 48s Reading state information... 48s Calculating upgrade... 48s The following packages will be upgraded: 48s libjson-c5 python3-inflect python3-oauthlib python3-zipp 48s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 48s Need to get 175 kB of archives. 48s After this operation, 31.7 kB of additional disk space will be used. 48s Get:1 http://ftpmaster.internal/ubuntu resolute/main s390x libjson-c5 s390x 0.18+ds-1.1 [36.8 kB] 49s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x python3-inflect all 7.5.0-1 [33.9 kB] 49s Get:3 http://ftpmaster.internal/ubuntu resolute/main s390x python3-oauthlib all 3.3.1-1 [93.5 kB] 49s Get:4 http://ftpmaster.internal/ubuntu resolute/main s390x python3-zipp all 3.23.0-1 [10.4 kB] 49s dpkg-preconfigure: unable to re-open stdin: No such file or directory 49s Fetched 175 kB in 0s (396 kB/s) 49s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56857 files and directories currently installed.) 49s Preparing to unpack .../libjson-c5_0.18+ds-1.1_s390x.deb ... 49s Unpacking libjson-c5:s390x (0.18+ds-1.1) over (0.18+ds-1) ... 49s Preparing to unpack .../python3-inflect_7.5.0-1_all.deb ... 49s Unpacking python3-inflect (7.5.0-1) over (7.3.1-2) ... 49s Preparing to unpack .../python3-oauthlib_3.3.1-1_all.deb ... 49s Unpacking python3-oauthlib (3.3.1-1) over (3.2.2-3) ... 49s Preparing to unpack .../python3-zipp_3.23.0-1_all.deb ... 49s Unpacking python3-zipp (3.23.0-1) over (3.21.0-1) ... 49s Setting up python3-zipp (3.23.0-1) ... 49s Setting up python3-inflect (7.5.0-1) ... 49s Setting up python3-oauthlib (3.3.1-1) ... 50s Setting up libjson-c5:s390x (0.18+ds-1.1) ... 50s Processing triggers for libc-bin (2.42-0ubuntu3) ... 50s autopkgtest [16:18:31]: upgrading testbed (apt dist-upgrade and autopurge) 50s Reading package lists... 50s Building dependency tree... 50s Reading state information... 50s Calculating upgrade... 50s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s Solving dependencies... 51s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 53s autopkgtest [16:18:34]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP Mon Sep 22 08:56:47 UTC 2025 53s autopkgtest [16:18:34]: @@@@@@@@@@@@@@@@@@@@ apt-source mdanalysis 61s Get:1 http://ftpmaster.internal/ubuntu resolute/universe mdanalysis 2.9.0-12 (dsc) [2945 B] 61s Get:2 http://ftpmaster.internal/ubuntu resolute/universe mdanalysis 2.9.0-12 (tar) [61.0 MB] 61s Get:3 http://ftpmaster.internal/ubuntu resolute/universe mdanalysis 2.9.0-12 (diff) [13.9 kB] 61s gpgv: Signature made Thu Jul 10 09:20:14 2025 UTC 61s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 61s gpgv: Can't check signature: No public key 61s dpkg-source: warning: cannot verify inline signature for ./mdanalysis_2.9.0-12.dsc: no acceptable signature found 61s autopkgtest [16:18:42]: testing package mdanalysis version 2.9.0-12 62s autopkgtest [16:18:43]: build not needed 66s autopkgtest [16:18:47]: test test-mdanalysis: preparing testbed 67s Reading package lists... 67s Building dependency tree... 67s Reading state information... 67s Solving dependencies... 67s The following NEW packages will be installed: 67s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-15 67s cpp-15-s390x-linux-gnu cpp-s390x-linux-gnu cython3 debhelper debugedit 67s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz 67s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 67s fonts-lato fonts-lyx fonts-mathjax fonts-urw-base35 g++ g++-15 67s g++-15-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-15 gcc-15-s390x-linux-gnu 67s gcc-s390x-linux-gnu gettext intltool-debian libaec0 libarchive-zip-perl 67s libasan8 libblas3 libcairo2 libcc1-0 libdebhelper-perl libdeflate0 67s libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 67s libfreetype6 libgcc-15-dev libgfortran5 libgomp1 libgraphite2-3 67s libharfbuzz0b libhdf5-310 libhdf5-hl-310 libimagequant0 libisl23 libitm1 67s libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-mathjax 67s libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 liblcms2-2 liblzf1 67s libmpc3 libnetcdf22 libopenjp2-7 libpixman-1-0 libpython3-all-dev 67s libpython3-dev libpython3.13-dev libqhull-r8.0 libraqm0 libsharpyuv0 67s libstdc++-15-dev libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libubsan1 67s libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 libxft2 67s libxrender1 libxslt1.1 libxss1 libzopfli1 m4 po-debconf 67s pybuild-plugin-pyproject python-matplotlib-data python-mdanalysis-doc 67s python3-alabaster python3-all python3-all-dev python3-biopython 67s python3-brotli python3-build python3-cairo python3-cftime 67s python3-charset-normalizer python3-citeproc python3-contourpy python3-cycler 67s python3-dateutil python3-decorator python3-defusedxml python3-dev 67s python3-docutils python3-duecredit python3-fasteners python3-filelock 67s python3-fonttools python3-freetype python3-fs python3-griddataformats 67s python3-h5py python3-h5py-serial python3-hypothesis python3-imagesize 67s python3-iniconfig python3-installer python3-joblib python3-kiwisolver 67s python3-latexcodec python3-looseversion python3-lxml python3-lz4 67s python3-matplotlib python3-mda-xdrlib python3-mdanalysis python3-mmtf 67s python3-monotonic python3-mpmath python3-mrcfile python3-msgpack 67s python3-msmb-theme python3-netcdf4 python3-networkx python3-numpy 67s python3-numpy-dev python3-packaging python3-pandas python3-pandas-lib 67s python3-pil python3-pil.imagetk python3-platformdirs python3-pluggy 67s python3-pybtex python3-pybtex-docutils python3-pyproject-hooks 67s python3-pytest python3-pytz python3-reportlab python3-rlpycairo 67s python3-roman python3-scipy python3-seaborn python3-six python3-sklearn 67s python3-sklearn-lib python3-snowballstemmer python3-sortedcontainers 67s python3-sphinx python3-sphinx-rtd-theme python3-sphinx-sitemap 67s python3-sphinxcontrib.bibtex python3-sphinxcontrib.jquery python3-sympy 67s python3-threadpoolctl python3-tk python3-tqdm python3-ufolib2 python3-wheel 67s python3-zopfli python3.13-dev python3.13-tk sgml-base sphinx-common 67s sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data w3c-sgml-lib x11-common 67s xfonts-encodings xfonts-utils xml-core zlib1g-dev 67s 0 upgraded, 199 newly installed, 0 to remove and 0 not upgraded. 67s Need to get 212 MB of archives. 67s After this operation, 859 MB of additional disk space will be used. 67s Get:1 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-lato all 2.015-1 [2781 kB] 68s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x python3-numpy-dev s390x 1:2.2.4+ds-1ubuntu1 [147 kB] 68s Get:3 http://ftpmaster.internal/ubuntu resolute/main s390x libblas3 s390x 3.12.1-6build1 [245 kB] 68s Get:4 http://ftpmaster.internal/ubuntu resolute/main s390x libgfortran5 s390x 15.2.0-5ubuntu1 [629 kB] 68s Get:5 http://ftpmaster.internal/ubuntu resolute/main s390x liblapack3 s390x 3.12.1-6build1 [2910 kB] 69s Get:6 http://ftpmaster.internal/ubuntu resolute/main s390x python3-numpy s390x 1:2.2.4+ds-1ubuntu1 [4399 kB] 69s Get:7 http://ftpmaster.internal/ubuntu resolute/main s390x m4 s390x 1.4.19-8 [259 kB] 69s Get:8 http://ftpmaster.internal/ubuntu resolute/main s390x autoconf all 2.72-3.1ubuntu1 [384 kB] 69s Get:9 http://ftpmaster.internal/ubuntu resolute/main s390x autotools-dev all 20240727.1 [43.4 kB] 69s Get:10 http://ftpmaster.internal/ubuntu resolute/main s390x automake all 1:1.17-4ubuntu1 [572 kB] 70s Get:11 http://ftpmaster.internal/ubuntu resolute/main s390x autopoint all 0.23.1-2build2 [619 kB] 70s Get:12 http://ftpmaster.internal/ubuntu resolute/main s390x libtcl8.6 s390x 8.6.17+dfsg-1 [1034 kB] 70s Get:13 http://ftpmaster.internal/ubuntu resolute/main s390x libfreetype6 s390x 2.13.3+dfsg-1build1 [430 kB] 70s Get:14 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 70s Get:15 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 70s Get:16 http://ftpmaster.internal/ubuntu resolute/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB] 70s Get:17 http://ftpmaster.internal/ubuntu resolute/main s390x x11-common all 1:7.7+24ubuntu1 [22.4 kB] 70s Get:18 http://ftpmaster.internal/ubuntu resolute/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 70s Get:19 http://ftpmaster.internal/ubuntu resolute/main s390x xfonts-utils s390x 1:7.7+7 [101 kB] 70s Get:20 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB] 72s Get:21 http://ftpmaster.internal/ubuntu resolute/main s390x fontconfig-config s390x 2.15.0-2.3ubuntu1 [38.1 kB] 72s Get:22 http://ftpmaster.internal/ubuntu resolute/main s390x libfontconfig1 s390x 2.15.0-2.3ubuntu1 [149 kB] 72s Get:23 http://ftpmaster.internal/ubuntu resolute/main s390x libxrender1 s390x 1:0.9.12-1 [20.9 kB] 72s Get:24 http://ftpmaster.internal/ubuntu resolute/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 72s Get:25 http://ftpmaster.internal/ubuntu resolute/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 72s Get:26 http://ftpmaster.internal/ubuntu resolute/main s390x libtk8.6 s390x 8.6.17-1 [828 kB] 72s Get:27 http://ftpmaster.internal/ubuntu resolute/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-8 [657 kB] 72s Get:28 http://ftpmaster.internal/ubuntu resolute/main s390x blt s390x 2.5.3+dfsg-8 [4826 B] 72s Get:29 http://ftpmaster.internal/ubuntu resolute/main s390x libisl23 s390x 0.27-1 [704 kB] 72s Get:30 http://ftpmaster.internal/ubuntu resolute/main s390x libmpc3 s390x 1.3.1-1build3 [57.6 kB] 72s Get:31 http://ftpmaster.internal/ubuntu resolute/main s390x cpp-15-s390x-linux-gnu s390x 15.2.0-5ubuntu1 [10.2 MB] 73s Get:32 http://ftpmaster.internal/ubuntu resolute/main s390x cpp-15 s390x 15.2.0-5ubuntu1 [1024 B] 73s Get:33 http://ftpmaster.internal/ubuntu resolute/main s390x cpp-s390x-linux-gnu s390x 4:15.2.0-4ubuntu1 [5746 B] 73s Get:34 http://ftpmaster.internal/ubuntu resolute/main s390x cpp s390x 4:15.2.0-4ubuntu1 [22.4 kB] 73s Get:35 http://ftpmaster.internal/ubuntu resolute/main s390x libcc1-0 s390x 15.2.0-5ubuntu1 [50.0 kB] 73s Get:36 http://ftpmaster.internal/ubuntu resolute/main s390x libgomp1 s390x 15.2.0-5ubuntu1 [154 kB] 73s Get:37 http://ftpmaster.internal/ubuntu resolute/main s390x libitm1 s390x 15.2.0-5ubuntu1 [30.9 kB] 73s Get:38 http://ftpmaster.internal/ubuntu resolute/main s390x libasan8 s390x 15.2.0-5ubuntu1 [2969 kB] 73s Get:39 http://ftpmaster.internal/ubuntu resolute/main s390x libubsan1 s390x 15.2.0-5ubuntu1 [1211 kB] 74s Get:40 http://ftpmaster.internal/ubuntu resolute/main s390x libgcc-15-dev s390x 15.2.0-5ubuntu1 [1045 kB] 74s Get:41 http://ftpmaster.internal/ubuntu resolute/main s390x gcc-15-s390x-linux-gnu s390x 15.2.0-5ubuntu1 [19.9 MB] 76s Get:42 http://ftpmaster.internal/ubuntu resolute/main s390x gcc-15 s390x 15.2.0-5ubuntu1 [512 kB] 76s Get:43 http://ftpmaster.internal/ubuntu resolute/main s390x gcc-s390x-linux-gnu s390x 4:15.2.0-4ubuntu1 [1208 B] 76s Get:44 http://ftpmaster.internal/ubuntu resolute/main s390x gcc s390x 4:15.2.0-4ubuntu1 [5018 B] 76s Get:45 http://ftpmaster.internal/ubuntu resolute/main s390x libstdc++-15-dev s390x 15.2.0-5ubuntu1 [2658 kB] 76s Get:46 http://ftpmaster.internal/ubuntu resolute/main s390x g++-15-s390x-linux-gnu s390x 15.2.0-5ubuntu1 [11.7 MB] 77s Get:47 http://ftpmaster.internal/ubuntu resolute/main s390x g++-15 s390x 15.2.0-5ubuntu1 [23.7 kB] 77s Get:48 http://ftpmaster.internal/ubuntu resolute/main s390x g++-s390x-linux-gnu s390x 4:15.2.0-4ubuntu1 [956 B] 77s Get:49 http://ftpmaster.internal/ubuntu resolute/main s390x g++ s390x 4:15.2.0-4ubuntu1 [1078 B] 77s Get:50 http://ftpmaster.internal/ubuntu resolute/main s390x build-essential s390x 12.12ubuntu1 [5090 B] 77s Get:51 http://ftpmaster.internal/ubuntu resolute/universe s390x cython3 s390x 3.0.11+dfsg-2ubuntu4 [3897 kB] 78s Get:52 http://ftpmaster.internal/ubuntu resolute/main s390x libdebhelper-perl all 13.24.2ubuntu1 [95.7 kB] 78s Get:53 http://ftpmaster.internal/ubuntu resolute/main s390x libtool all 2.5.4-4build1 [169 kB] 78s Get:54 http://ftpmaster.internal/ubuntu resolute/main s390x dh-autoreconf all 21 [12.5 kB] 78s Get:55 http://ftpmaster.internal/ubuntu resolute/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] 78s Get:56 http://ftpmaster.internal/ubuntu resolute/main s390x libfile-stripnondeterminism-perl all 1.14.2-1 [20.4 kB] 78s Get:57 http://ftpmaster.internal/ubuntu resolute/main s390x dh-strip-nondeterminism all 1.14.2-1 [5098 B] 78s Get:58 http://ftpmaster.internal/ubuntu resolute/main s390x debugedit s390x 1:5.2-3 [52.8 kB] 78s Get:59 http://ftpmaster.internal/ubuntu resolute/main s390x dwz s390x 0.16-2 [121 kB] 78s Get:60 http://ftpmaster.internal/ubuntu resolute/main s390x gettext s390x 0.23.1-2build2 [1062 kB] 78s Get:61 http://ftpmaster.internal/ubuntu resolute/main s390x intltool-debian all 0.35.0+20060710.6 [23.2 kB] 78s Get:62 http://ftpmaster.internal/ubuntu resolute/main s390x po-debconf all 1.0.21+nmu1 [233 kB] 78s Get:63 http://ftpmaster.internal/ubuntu resolute/main s390x debhelper all 13.24.2ubuntu1 [896 kB] 78s Get:64 http://ftpmaster.internal/ubuntu resolute/universe s390x dh-python all 6.20250414 [119 kB] 78s Get:65 http://ftpmaster.internal/ubuntu resolute/main s390x sgml-base all 1.31+nmu1 [11.0 kB] 78s Get:66 http://ftpmaster.internal/ubuntu resolute/main s390x xml-core all 0.19 [20.3 kB] 78s Get:67 http://ftpmaster.internal/ubuntu resolute/main s390x docutils-common all 0.21.2+dfsg-2 [131 kB] 78s Get:68 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 78s Get:69 http://ftpmaster.internal/ubuntu resolute/universe s390x fonts-lyx all 2.4.4-1 [171 kB] 78s Get:70 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 79s Get:71 http://ftpmaster.internal/ubuntu resolute/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB] 79s Get:72 http://ftpmaster.internal/ubuntu resolute/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 79s Get:73 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-render0 s390x 1.17.0-2build1 [16.9 kB] 79s Get:74 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-shm0 s390x 1.17.0-2build1 [5916 B] 79s Get:75 http://ftpmaster.internal/ubuntu resolute/main s390x libcairo2 s390x 1.18.4-1build1 [580 kB] 79s Get:76 http://ftpmaster.internal/ubuntu resolute/main s390x libdeflate0 s390x 1.23-2 [46.0 kB] 79s Get:77 http://ftpmaster.internal/ubuntu resolute/main s390x libexpat1-dev s390x 2.7.1-2 [147 kB] 79s Get:78 http://ftpmaster.internal/ubuntu resolute/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 79s Get:79 http://ftpmaster.internal/ubuntu resolute/main s390x libharfbuzz0b s390x 12.1.0-1 [576 kB] 79s Get:80 http://ftpmaster.internal/ubuntu resolute/universe s390x libsz2 s390x 1.1.3-1 [5442 B] 79s Get:81 http://ftpmaster.internal/ubuntu resolute/universe s390x libhdf5-310 s390x 1.14.5+repack-3build1 [1477 kB] 79s Get:82 http://ftpmaster.internal/ubuntu resolute/universe s390x libhdf5-hl-310 s390x 1.14.5+repack-3build1 [61.1 kB] 79s Get:83 http://ftpmaster.internal/ubuntu resolute/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 79s Get:84 http://ftpmaster.internal/ubuntu resolute/main s390x libjpeg-turbo8 s390x 2.1.5-4ubuntu2 [147 kB] 79s Get:85 http://ftpmaster.internal/ubuntu resolute/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 79s Get:86 http://ftpmaster.internal/ubuntu resolute/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 79s Get:87 http://ftpmaster.internal/ubuntu resolute/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 79s Get:88 http://ftpmaster.internal/ubuntu resolute/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 79s Get:89 http://ftpmaster.internal/ubuntu resolute/main s390x libjs-sphinxdoc all 8.2.3-1ubuntu2 [28.0 kB] 79s Get:90 http://ftpmaster.internal/ubuntu resolute/main s390x libjson-perl all 4.10000-1 [81.9 kB] 79s Get:91 http://ftpmaster.internal/ubuntu resolute/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 79s Get:92 http://ftpmaster.internal/ubuntu resolute/universe s390x liblzf1 s390x 3.6-4 [7020 B] 79s Get:93 http://ftpmaster.internal/ubuntu resolute/universe s390x libnetcdf22 s390x 1:4.9.3-1build1 [583 kB] 79s Get:94 http://ftpmaster.internal/ubuntu resolute/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu2 [897 kB] 79s Get:95 http://ftpmaster.internal/ubuntu resolute/main s390x libpython3.13-dev s390x 3.13.7-1 [5630 kB] 80s Get:96 http://ftpmaster.internal/ubuntu resolute/main s390x libpython3-dev s390x 3.13.7-1 [10.8 kB] 80s Get:97 http://ftpmaster.internal/ubuntu resolute/main s390x libpython3-all-dev s390x 3.13.7-1 [912 B] 80s Get:98 http://ftpmaster.internal/ubuntu resolute/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB] 80s Get:99 http://ftpmaster.internal/ubuntu resolute/main s390x libraqm0 s390x 0.10.3-1 [15.6 kB] 80s Get:100 http://ftpmaster.internal/ubuntu resolute/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 80s Get:101 http://ftpmaster.internal/ubuntu resolute/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 80s Get:102 http://ftpmaster.internal/ubuntu resolute/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 80s Get:103 http://ftpmaster.internal/ubuntu resolute/main s390x libtiff6 s390x 4.7.0-3ubuntu3 [222 kB] 80s Get:104 http://ftpmaster.internal/ubuntu resolute/main s390x libwebpdemux2 s390x 1.5.0-0.1 [12.6 kB] 81s Get:105 http://ftpmaster.internal/ubuntu resolute/main s390x libwebpmux3 s390x 1.5.0-0.1 [25.8 kB] 81s Get:106 http://ftpmaster.internal/ubuntu resolute/main s390x libxslt1.1 s390x 1.1.43-0.1 [163 kB] 81s Get:107 http://ftpmaster.internal/ubuntu resolute/universe s390x libzopfli1 s390x 1.0.3-3 [124 kB] 81s Get:108 http://ftpmaster.internal/ubuntu resolute/main s390x python3-packaging all 25.0-1 [52.8 kB] 81s Get:109 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 81s Get:110 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-wheel all 0.46.1-2 [22.1 kB] 81s Get:111 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-build all 1.2.2-2 [31.0 kB] 81s Get:112 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 81s Get:113 http://ftpmaster.internal/ubuntu resolute/universe s390x pybuild-plugin-pyproject all 6.20250414 [1728 B] 81s Get:114 http://ftpmaster.internal/ubuntu resolute/universe s390x python-matplotlib-data all 3.10.1+dfsg1-4 [2930 kB] 81s Get:115 http://ftpmaster.internal/ubuntu resolute/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 83s Get:116 http://ftpmaster.internal/ubuntu resolute/universe s390x python-mdanalysis-doc all 2.9.0-12 [3459 kB] 84s Get:117 http://ftpmaster.internal/ubuntu resolute/main s390x python3-all s390x 3.13.7-1 [886 B] 84s Get:118 http://ftpmaster.internal/ubuntu resolute/main s390x python3.13-dev s390x 3.13.7-1 [508 kB] 84s Get:119 http://ftpmaster.internal/ubuntu resolute/main s390x python3-dev s390x 3.13.7-1 [26.6 kB] 84s Get:120 http://ftpmaster.internal/ubuntu resolute/main s390x python3-all-dev s390x 3.13.7-1 [908 B] 84s Get:121 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-charset-normalizer s390x 3.4.2-1 [129 kB] 84s Get:122 http://ftpmaster.internal/ubuntu resolute/main s390x python3.13-tk s390x 3.13.7-1 [108 kB] 84s Get:123 http://ftpmaster.internal/ubuntu resolute/main s390x python3-tk s390x 3.13.5-1 [9916 B] 84s Get:124 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pil.imagetk s390x 11.3.0-1ubuntu1 [9370 B] 84s Get:125 http://ftpmaster.internal/ubuntu resolute/main s390x libopenjp2-7 s390x 2.5.3-2.1 [207 kB] 84s Get:126 http://ftpmaster.internal/ubuntu resolute/main s390x python3-pil s390x 11.3.0-1ubuntu1 [515 kB] 84s Get:127 http://ftpmaster.internal/ubuntu resolute/main s390x python3-cairo s390x 1.27.0-2build1 [140 kB] 84s Get:128 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-freetype all 2.5.1-1 [92.3 kB] 84s Get:129 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B] 84s Get:130 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-reportlab all 4.4.2-1 [1145 kB] 84s Get:131 http://ftpmaster.internal/ubuntu resolute/universe s390x w3c-sgml-lib all 1.3-3 [280 kB] 85s Get:132 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-biopython s390x 1.85+dfsg-4 [1745 kB] 85s Get:133 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-brotli s390x 1.1.0-2build5 [383 kB] 85s Get:134 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-cftime s390x 1.6.4-2 [226 kB] 85s Get:135 http://ftpmaster.internal/ubuntu resolute/main s390x python3-lxml s390x 6.0.1-1 [1522 kB] 85s Get:136 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-citeproc all 0.8.2-1 [99.9 kB] 85s Get:137 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-contourpy s390x 1.3.1-1build1 [197 kB] 85s Get:138 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-cycler all 0.12.1-1 [9716 B] 85s Get:139 http://ftpmaster.internal/ubuntu resolute/main s390x python3-dateutil all 2.9.0-4 [80.3 kB] 85s Get:140 http://ftpmaster.internal/ubuntu resolute/main s390x python3-decorator all 5.2.1-2 [28.1 kB] 85s Get:141 http://ftpmaster.internal/ubuntu resolute/main s390x python3-defusedxml all 0.7.1-3 [42.2 kB] 85s Get:142 http://ftpmaster.internal/ubuntu resolute/main s390x python3-roman all 5.1-1 [10.6 kB] 85s Get:143 http://ftpmaster.internal/ubuntu resolute/main s390x python3-docutils all 0.21.2+dfsg-2 [409 kB] 85s Get:144 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-looseversion all 1.3.0-3 [8354 B] 85s Get:145 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-duecredit all 0.10.2-2 [66.0 kB] 85s Get:146 http://ftpmaster.internal/ubuntu resolute/main s390x python3-monotonic all 1.6-3 [5344 B] 85s Get:147 http://ftpmaster.internal/ubuntu resolute/main s390x python3-fasteners all 0.18-2 [12.5 kB] 85s Get:148 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-filelock all 3.18.0-1 [13.0 kB] 85s Get:149 http://ftpmaster.internal/ubuntu resolute/main s390x python3-platformdirs all 4.3.7-1 [16.9 kB] 85s Get:150 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-fs all 2.4.16-7 [90.8 kB] 85s Get:151 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-lz4 s390x 4.4.0+dfsg-2 [26.6 kB] 85s Get:152 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-scipy s390x 1.15.3-1 [17.2 MB] 90s Get:153 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-mpmath all 1.3.0-1 [425 kB] 90s Get:154 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sympy all 1.13.3-5 [4229 kB] 92s Get:155 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-ufolib2 all 0.17.1+dfsg1-1 [33.5 kB] 92s Get:156 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-zopfli s390x 0.2.3.post1-1 [10.9 kB] 92s Get:157 http://ftpmaster.internal/ubuntu resolute/universe s390x unicode-data all 16.0.0-1 [9513 kB] 95s Get:158 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-fonttools s390x 4.57.0-1 [1483 kB] 95s Get:159 http://ftpmaster.internal/ubuntu resolute/main s390x sphinx-rtd-theme-common all 3.0.2+dfsg-3 [1013 kB] 95s Get:160 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-mrcfile all 1.5.4-2 [116 kB] 95s Get:161 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-griddataformats all 1.0.2-2 [2107 kB] 96s Get:162 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-h5py-serial s390x 3.13.0-1ubuntu1 [1182 kB] 96s Get:163 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-h5py all 3.13.0-1ubuntu1 [8230 B] 96s Get:164 http://ftpmaster.internal/ubuntu resolute/main s390x python3-sortedcontainers all 2.4.0-2 [27.6 kB] 96s Get:165 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-hypothesis all 6.130.5-2 [341 kB] 96s Get:166 http://ftpmaster.internal/ubuntu resolute/main s390x python3-imagesize all 1.4.1-1 [6844 B] 96s Get:167 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 96s Get:168 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-joblib all 1.4.2-4 [205 kB] 96s Get:169 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-kiwisolver s390x 1.4.7-3build2 [63.7 kB] 96s Get:170 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-latexcodec all 3.0.0-1 [16.6 kB] 96s Get:171 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-matplotlib s390x 3.10.1+dfsg1-4 [18.0 MB] 99s Get:172 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-mda-xdrlib all 0.2.0-3 [11.4 kB] 99s Get:173 http://ftpmaster.internal/ubuntu resolute/main s390x python3-msgpack s390x 1.0.3-3build4 [87.7 kB] 99s Get:174 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-mmtf all 1.1.3-1 [16.2 kB] 99s Get:175 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-threadpoolctl all 3.1.0-1 [21.3 kB] 99s Get:176 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-tqdm all 4.67.1-5 [92.1 kB] 99s Get:177 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-mdanalysis s390x 2.9.0-12 [3840 kB] 100s Get:178 http://ftpmaster.internal/ubuntu resolute/main s390x sphinx-common all 8.2.3-1ubuntu2 [656 kB] 100s Get:179 http://ftpmaster.internal/ubuntu resolute/main s390x python3-alabaster all 0.7.16-0.1 [18.5 kB] 100s Get:180 http://ftpmaster.internal/ubuntu resolute/main s390x python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 100s Get:181 http://ftpmaster.internal/ubuntu resolute/main s390x python3-sphinx all 8.2.3-1ubuntu2 [482 kB] 100s Get:182 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sphinxcontrib.jquery all 4.1-6 [6856 B] 100s Get:183 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sphinx-rtd-theme all 3.0.2+dfsg-3 [23.5 kB] 100s Get:184 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-msmb-theme all 1.2.0-4 [35.4 kB] 100s Get:185 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-netcdf4 s390x 1.7.2-1build4 [645 kB] 100s Get:186 http://ftpmaster.internal/ubuntu resolute/main s390x python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 101s Get:187 http://ftpmaster.internal/ubuntu resolute/main s390x python3-pytz all 2025.2-3 [163 kB] 101s Get:188 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pandas-lib s390x 2.2.3+dfsg-9 [4991 kB] 101s Get:189 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pandas all 2.2.3+dfsg-9 [3112 kB] 102s Get:190 http://ftpmaster.internal/ubuntu resolute-proposed/universe s390x python3-pluggy all 1.6.0-1 [21.0 kB] 102s Get:191 http://ftpmaster.internal/ubuntu resolute/main s390x python3-six all 1.17.0-1 [13.2 kB] 102s Get:192 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pybtex all 0.24.0-4 [70.0 kB] 102s Get:193 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pybtex-docutils all 1.0.2-1 [7176 B] 102s Get:194 http://ftpmaster.internal/ubuntu resolute-proposed/universe s390x python3-pytest all 8.4.2-1 [268 kB] 102s Get:195 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-seaborn all 0.13.2-5 [225 kB] 102s Get:196 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sklearn-lib s390x 1.4.2+dfsg-8 [4262 kB] 102s Get:197 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sklearn all 1.4.2+dfsg-8 [2258 kB] 102s Get:198 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sphinx-sitemap all 2.6.0-1 [6674 B] 102s Get:199 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sphinxcontrib.bibtex all 2.6.2-1 [25.2 kB] 102s Fetched 212 MB in 35s (6089 kB/s) 102s Selecting previously unselected package fonts-lato. 102s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56867 files and directories currently installed.) 102s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ... 102s Unpacking fonts-lato (2.015-1) ... 103s Selecting previously unselected package python3-numpy-dev:s390x. 103s Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_s390x.deb ... 103s Unpacking python3-numpy-dev:s390x (1:2.2.4+ds-1ubuntu1) ... 103s Selecting previously unselected package libblas3:s390x. 103s Preparing to unpack .../002-libblas3_3.12.1-6build1_s390x.deb ... 103s Unpacking libblas3:s390x (3.12.1-6build1) ... 103s Selecting previously unselected package libgfortran5:s390x. 103s Preparing to unpack .../003-libgfortran5_15.2.0-5ubuntu1_s390x.deb ... 103s Unpacking libgfortran5:s390x (15.2.0-5ubuntu1) ... 103s Selecting previously unselected package liblapack3:s390x. 103s Preparing to unpack .../004-liblapack3_3.12.1-6build1_s390x.deb ... 103s Unpacking liblapack3:s390x (3.12.1-6build1) ... 103s Selecting previously unselected package python3-numpy. 103s Preparing to unpack .../005-python3-numpy_1%3a2.2.4+ds-1ubuntu1_s390x.deb ... 103s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 103s Selecting previously unselected package m4. 103s Preparing to unpack .../006-m4_1.4.19-8_s390x.deb ... 103s Unpacking m4 (1.4.19-8) ... 103s Selecting previously unselected package autoconf. 103s Preparing to unpack .../007-autoconf_2.72-3.1ubuntu1_all.deb ... 103s Unpacking autoconf (2.72-3.1ubuntu1) ... 103s Selecting previously unselected package autotools-dev. 103s Preparing to unpack .../008-autotools-dev_20240727.1_all.deb ... 103s Unpacking autotools-dev (20240727.1) ... 103s Selecting previously unselected package automake. 103s Preparing to unpack .../009-automake_1%3a1.17-4ubuntu1_all.deb ... 103s Unpacking automake (1:1.17-4ubuntu1) ... 103s Selecting previously unselected package autopoint. 103s Preparing to unpack .../010-autopoint_0.23.1-2build2_all.deb ... 103s Unpacking autopoint (0.23.1-2build2) ... 103s Selecting previously unselected package libtcl8.6:s390x. 103s Preparing to unpack .../011-libtcl8.6_8.6.17+dfsg-1_s390x.deb ... 103s Unpacking libtcl8.6:s390x (8.6.17+dfsg-1) ... 103s Selecting previously unselected package libfreetype6:s390x. 103s Preparing to unpack .../012-libfreetype6_2.13.3+dfsg-1build1_s390x.deb ... 103s Unpacking libfreetype6:s390x (2.13.3+dfsg-1build1) ... 103s Selecting previously unselected package fonts-dejavu-mono. 103s Preparing to unpack .../013-fonts-dejavu-mono_2.37-8_all.deb ... 103s Unpacking fonts-dejavu-mono (2.37-8) ... 103s Selecting previously unselected package fonts-dejavu-core. 103s Preparing to unpack .../014-fonts-dejavu-core_2.37-8_all.deb ... 103s Unpacking fonts-dejavu-core (2.37-8) ... 103s Selecting previously unselected package libfontenc1:s390x. 103s Preparing to unpack .../015-libfontenc1_1%3a1.1.8-1build1_s390x.deb ... 103s Unpacking libfontenc1:s390x (1:1.1.8-1build1) ... 103s Selecting previously unselected package x11-common. 103s Preparing to unpack .../016-x11-common_1%3a7.7+24ubuntu1_all.deb ... 103s Unpacking x11-common (1:7.7+24ubuntu1) ... 103s Selecting previously unselected package xfonts-encodings. 103s Preparing to unpack .../017-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 103s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 103s Selecting previously unselected package xfonts-utils. 103s Preparing to unpack .../018-xfonts-utils_1%3a7.7+7_s390x.deb ... 103s Unpacking xfonts-utils (1:7.7+7) ... 103s Selecting previously unselected package fonts-urw-base35. 103s Preparing to unpack .../019-fonts-urw-base35_20200910-8_all.deb ... 103s Unpacking fonts-urw-base35 (20200910-8) ... 103s Selecting previously unselected package fontconfig-config. 103s Preparing to unpack .../020-fontconfig-config_2.15.0-2.3ubuntu1_s390x.deb ... 103s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 103s Selecting previously unselected package libfontconfig1:s390x. 103s Preparing to unpack .../021-libfontconfig1_2.15.0-2.3ubuntu1_s390x.deb ... 103s Unpacking libfontconfig1:s390x (2.15.0-2.3ubuntu1) ... 103s Selecting previously unselected package libxrender1:s390x. 103s Preparing to unpack .../022-libxrender1_1%3a0.9.12-1_s390x.deb ... 103s Unpacking libxrender1:s390x (1:0.9.12-1) ... 103s Selecting previously unselected package libxft2:s390x. 103s Preparing to unpack .../023-libxft2_2.3.6-1build1_s390x.deb ... 103s Unpacking libxft2:s390x (2.3.6-1build1) ... 103s Selecting previously unselected package libxss1:s390x. 103s Preparing to unpack .../024-libxss1_1%3a1.2.3-1build3_s390x.deb ... 103s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 103s Selecting previously unselected package libtk8.6:s390x. 103s Preparing to unpack .../025-libtk8.6_8.6.17-1_s390x.deb ... 103s Unpacking libtk8.6:s390x (8.6.17-1) ... 103s Selecting previously unselected package tk8.6-blt2.5. 103s Preparing to unpack .../026-tk8.6-blt2.5_2.5.3+dfsg-8_s390x.deb ... 103s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 104s Selecting previously unselected package blt. 104s Preparing to unpack .../027-blt_2.5.3+dfsg-8_s390x.deb ... 104s Unpacking blt (2.5.3+dfsg-8) ... 104s Selecting previously unselected package libisl23:s390x. 104s Preparing to unpack .../028-libisl23_0.27-1_s390x.deb ... 104s Unpacking libisl23:s390x (0.27-1) ... 104s Selecting previously unselected package libmpc3:s390x. 104s Preparing to unpack .../029-libmpc3_1.3.1-1build3_s390x.deb ... 104s Unpacking libmpc3:s390x (1.3.1-1build3) ... 104s Selecting previously unselected package cpp-15-s390x-linux-gnu. 104s Preparing to unpack .../030-cpp-15-s390x-linux-gnu_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking cpp-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package cpp-15. 104s Preparing to unpack .../031-cpp-15_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking cpp-15 (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package cpp-s390x-linux-gnu. 104s Preparing to unpack .../032-cpp-s390x-linux-gnu_4%3a15.2.0-4ubuntu1_s390x.deb ... 104s Unpacking cpp-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 104s Selecting previously unselected package cpp. 104s Preparing to unpack .../033-cpp_4%3a15.2.0-4ubuntu1_s390x.deb ... 104s Unpacking cpp (4:15.2.0-4ubuntu1) ... 104s Selecting previously unselected package libcc1-0:s390x. 104s Preparing to unpack .../034-libcc1-0_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking libcc1-0:s390x (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package libgomp1:s390x. 104s Preparing to unpack .../035-libgomp1_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking libgomp1:s390x (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package libitm1:s390x. 104s Preparing to unpack .../036-libitm1_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking libitm1:s390x (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package libasan8:s390x. 104s Preparing to unpack .../037-libasan8_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking libasan8:s390x (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package libubsan1:s390x. 104s Preparing to unpack .../038-libubsan1_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking libubsan1:s390x (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package libgcc-15-dev:s390x. 104s Preparing to unpack .../039-libgcc-15-dev_15.2.0-5ubuntu1_s390x.deb ... 104s Unpacking libgcc-15-dev:s390x (15.2.0-5ubuntu1) ... 104s Selecting previously unselected package gcc-15-s390x-linux-gnu. 104s 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cython3 (3.0.11+dfsg-2ubuntu4) ... 105s Selecting previously unselected package libdebhelper-perl. 105s Preparing to unpack .../051-libdebhelper-perl_13.24.2ubuntu1_all.deb ... 105s Unpacking libdebhelper-perl (13.24.2ubuntu1) ... 105s Selecting previously unselected package libtool. 105s Preparing to unpack .../052-libtool_2.5.4-4build1_all.deb ... 105s Unpacking libtool (2.5.4-4build1) ... 105s Selecting previously unselected package dh-autoreconf. 105s Preparing to unpack .../053-dh-autoreconf_21_all.deb ... 105s Unpacking dh-autoreconf (21) ... 105s Selecting previously unselected package libarchive-zip-perl. 105s Preparing to unpack .../054-libarchive-zip-perl_1.68-1_all.deb ... 105s Unpacking libarchive-zip-perl (1.68-1) ... 105s Selecting previously unselected package libfile-stripnondeterminism-perl. 105s Preparing to unpack .../055-libfile-stripnondeterminism-perl_1.14.2-1_all.deb ... 105s Unpacking libfile-stripnondeterminism-perl (1.14.2-1) ... 105s Selecting previously unselected package dh-strip-nondeterminism. 105s Preparing to unpack .../056-dh-strip-nondeterminism_1.14.2-1_all.deb ... 105s Unpacking dh-strip-nondeterminism (1.14.2-1) ... 105s Selecting previously unselected package debugedit. 105s Preparing to unpack .../057-debugedit_1%3a5.2-3_s390x.deb ... 105s Unpacking debugedit (1:5.2-3) ... 105s Selecting previously unselected package dwz. 105s Preparing to unpack .../058-dwz_0.16-2_s390x.deb ... 105s Unpacking dwz (0.16-2) ... 105s Selecting previously unselected package gettext. 105s Preparing to unpack .../059-gettext_0.23.1-2build2_s390x.deb ... 105s Unpacking gettext (0.23.1-2build2) ... 105s Selecting previously unselected package intltool-debian. 105s Preparing to unpack .../060-intltool-debian_0.35.0+20060710.6_all.deb ... 105s Unpacking intltool-debian (0.35.0+20060710.6) ... 105s Selecting previously unselected package po-debconf. 105s Preparing to unpack .../061-po-debconf_1.0.21+nmu1_all.deb ... 105s Unpacking po-debconf 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libxcb-render0:s390x (1.17.0-2build1) ... 105s Selecting previously unselected package libxcb-shm0:s390x. 105s Preparing to unpack .../073-libxcb-shm0_1.17.0-2build1_s390x.deb ... 105s Unpacking libxcb-shm0:s390x (1.17.0-2build1) ... 105s Selecting previously unselected package libcairo2:s390x. 105s Preparing to unpack .../074-libcairo2_1.18.4-1build1_s390x.deb ... 105s Unpacking libcairo2:s390x (1.18.4-1build1) ... 105s Selecting previously unselected package libdeflate0:s390x. 105s Preparing to unpack .../075-libdeflate0_1.23-2_s390x.deb ... 105s Unpacking libdeflate0:s390x (1.23-2) ... 105s Selecting previously unselected package libexpat1-dev:s390x. 105s Preparing to unpack .../076-libexpat1-dev_2.7.1-2_s390x.deb ... 105s Unpacking libexpat1-dev:s390x (2.7.1-2) ... 105s Selecting previously unselected package libgraphite2-3:s390x. 105s Preparing to unpack .../077-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 105s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 105s Selecting previously unselected package libharfbuzz0b:s390x. 105s Preparing to unpack .../078-libharfbuzz0b_12.1.0-1_s390x.deb ... 105s Unpacking libharfbuzz0b:s390x (12.1.0-1) ... 105s Selecting previously unselected package libsz2:s390x. 105s Preparing to unpack .../079-libsz2_1.1.3-1_s390x.deb ... 105s Unpacking libsz2:s390x (1.1.3-1) ... 105s Selecting previously unselected package libhdf5-310:s390x. 105s Preparing to unpack .../080-libhdf5-310_1.14.5+repack-3build1_s390x.deb ... 105s Unpacking libhdf5-310:s390x (1.14.5+repack-3build1) ... 105s Selecting previously unselected package libhdf5-hl-310:s390x. 105s Preparing to unpack .../081-libhdf5-hl-310_1.14.5+repack-3build1_s390x.deb ... 105s Unpacking libhdf5-hl-310:s390x (1.14.5+repack-3build1) ... 105s Selecting previously unselected package libimagequant0:s390x. 105s Preparing to unpack .../082-libimagequant0_2.18.0-1build1_s390x.deb ... 105s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 105s Selecting previously unselected package libjpeg-turbo8:s390x. 105s Preparing to unpack .../083-libjpeg-turbo8_2.1.5-4ubuntu2_s390x.deb ... 105s Unpacking libjpeg-turbo8:s390x (2.1.5-4ubuntu2) ... 105s Selecting previously unselected package libjpeg8:s390x. 105s Preparing to unpack .../084-libjpeg8_8c-2ubuntu11_s390x.deb ... 105s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 105s Selecting previously unselected package libjs-jquery. 105s Preparing to unpack .../085-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 105s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 105s Selecting previously unselected package libjs-jquery-ui. 105s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 105s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 105s Selecting previously unselected package libjs-underscore. 105s Preparing to unpack .../087-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 105s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 105s Selecting previously unselected package libjs-sphinxdoc. 105s Preparing to unpack .../088-libjs-sphinxdoc_8.2.3-1ubuntu2_all.deb ... 105s Unpacking libjs-sphinxdoc (8.2.3-1ubuntu2) ... 105s Selecting previously unselected package libjson-perl. 105s Preparing to unpack .../089-libjson-perl_4.10000-1_all.deb ... 105s Unpacking libjson-perl (4.10000-1) ... 105s Selecting previously unselected package liblcms2-2:s390x. 105s Preparing to unpack .../090-liblcms2-2_2.16-2_s390x.deb ... 105s Unpacking liblcms2-2:s390x (2.16-2) ... 105s Selecting previously unselected package liblzf1:s390x. 105s Preparing to unpack .../091-liblzf1_3.6-4_s390x.deb ... 105s Unpacking liblzf1:s390x (3.6-4) ... 105s Selecting previously unselected package libnetcdf22:s390x. 105s Preparing to unpack .../092-libnetcdf22_1%3a4.9.3-1build1_s390x.deb ... 105s Unpacking libnetcdf22:s390x (1:4.9.3-1build1) ... 105s Selecting previously unselected package zlib1g-dev:s390x. 105s Preparing to unpack .../093-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_s390x.deb ... 105s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 105s Selecting previously unselected package libpython3.13-dev:s390x. 105s Preparing to unpack .../094-libpython3.13-dev_3.13.7-1_s390x.deb ... 105s Unpacking libpython3.13-dev:s390x (3.13.7-1) ... 106s Selecting previously unselected package libpython3-dev:s390x. 106s Preparing to unpack .../095-libpython3-dev_3.13.7-1_s390x.deb ... 106s Unpacking libpython3-dev:s390x (3.13.7-1) ... 106s Selecting previously unselected package libpython3-all-dev:s390x. 106s Preparing to unpack .../096-libpython3-all-dev_3.13.7-1_s390x.deb ... 106s Unpacking libpython3-all-dev:s390x (3.13.7-1) ... 106s Selecting previously unselected package libqhull-r8.0:s390x. 106s Preparing to unpack .../097-libqhull-r8.0_2020.2-6build1_s390x.deb ... 106s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ... 106s Selecting previously unselected package libraqm0:s390x. 106s Preparing to unpack .../098-libraqm0_0.10.3-1_s390x.deb ... 106s Unpacking libraqm0:s390x 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Preparing to unpack .../104-libwebpmux3_1.5.0-0.1_s390x.deb ... 106s Unpacking libwebpmux3:s390x (1.5.0-0.1) ... 106s Selecting previously unselected package libxslt1.1:s390x. 106s Preparing to unpack .../105-libxslt1.1_1.1.43-0.1_s390x.deb ... 106s Unpacking libxslt1.1:s390x (1.1.43-0.1) ... 106s Selecting previously unselected package libzopfli1. 106s Preparing to unpack .../106-libzopfli1_1.0.3-3_s390x.deb ... 106s Unpacking libzopfli1 (1.0.3-3) ... 106s Selecting previously unselected package python3-packaging. 106s Preparing to unpack .../107-python3-packaging_25.0-1_all.deb ... 106s Unpacking python3-packaging (25.0-1) ... 106s Selecting previously unselected package python3-pyproject-hooks. 106s Preparing to unpack .../108-python3-pyproject-hooks_1.2.0-1_all.deb ... 106s Unpacking python3-pyproject-hooks (1.2.0-1) ... 106s Selecting previously unselected package python3-wheel. 106s Preparing to unpack .../109-python3-wheel_0.46.1-2_all.deb ... 106s Unpacking python3-wheel (0.46.1-2) ... 106s Selecting previously unselected package python3-build. 106s Preparing to unpack .../110-python3-build_1.2.2-2_all.deb ... 106s Unpacking python3-build (1.2.2-2) ... 106s Selecting previously unselected package python3-installer. 106s Preparing to unpack .../111-python3-installer_0.7.0+dfsg1-3_all.deb ... 106s Unpacking python3-installer (0.7.0+dfsg1-3) ... 106s Selecting previously unselected package pybuild-plugin-pyproject. 106s Preparing to unpack .../112-pybuild-plugin-pyproject_6.20250414_all.deb ... 106s Unpacking pybuild-plugin-pyproject (6.20250414) ... 106s Selecting previously unselected package python-matplotlib-data. 106s Preparing to unpack .../113-python-matplotlib-data_3.10.1+dfsg1-4_all.deb ... 106s Unpacking python-matplotlib-data (3.10.1+dfsg1-4) ... 106s Selecting previously unselected package libjs-mathjax. 106s Preparing to unpack .../114-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 106s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 106s Selecting previously unselected package python-mdanalysis-doc. 106s Preparing to unpack .../115-python-mdanalysis-doc_2.9.0-12_all.deb ... 106s Unpacking python-mdanalysis-doc (2.9.0-12) ... 106s Selecting previously unselected package python3-all. 106s Preparing to unpack .../116-python3-all_3.13.7-1_s390x.deb ... 106s Unpacking python3-all (3.13.7-1) ... 106s Selecting previously unselected package python3.13-dev. 106s Preparing to unpack .../117-python3.13-dev_3.13.7-1_s390x.deb ... 106s Unpacking python3.13-dev (3.13.7-1) ... 106s Selecting previously unselected package python3-dev. 106s Preparing to unpack .../118-python3-dev_3.13.7-1_s390x.deb ... 106s Unpacking python3-dev (3.13.7-1) ... 106s Selecting previously unselected package python3-all-dev. 106s Preparing to unpack .../119-python3-all-dev_3.13.7-1_s390x.deb ... 106s Unpacking python3-all-dev (3.13.7-1) ... 106s Selecting previously unselected package python3-charset-normalizer. 106s Preparing to unpack .../120-python3-charset-normalizer_3.4.2-1_s390x.deb ... 106s Unpacking python3-charset-normalizer (3.4.2-1) ... 106s Selecting previously unselected package python3.13-tk. 106s Preparing to unpack .../121-python3.13-tk_3.13.7-1_s390x.deb ... 106s Unpacking python3.13-tk (3.13.7-1) ... 106s Selecting previously unselected package python3-tk:s390x. 106s Preparing to unpack .../122-python3-tk_3.13.5-1_s390x.deb ... 106s Unpacking python3-tk:s390x (3.13.5-1) ... 106s Selecting previously unselected package python3-pil.imagetk:s390x. 106s Preparing to unpack .../123-python3-pil.imagetk_11.3.0-1ubuntu1_s390x.deb ... 106s Unpacking python3-pil.imagetk:s390x (11.3.0-1ubuntu1) ... 106s Selecting previously unselected package libopenjp2-7:s390x. 106s Preparing to unpack .../124-libopenjp2-7_2.5.3-2.1_s390x.deb ... 106s Unpacking libopenjp2-7:s390x (2.5.3-2.1) ... 106s Selecting previously unselected package python3-pil:s390x. 106s Preparing to unpack .../125-python3-pil_11.3.0-1ubuntu1_s390x.deb ... 106s Unpacking python3-pil:s390x (11.3.0-1ubuntu1) ... 106s Selecting previously unselected package python3-cairo. 106s Preparing to unpack .../126-python3-cairo_1.27.0-2build1_s390x.deb ... 106s Unpacking python3-cairo (1.27.0-2build1) ... 106s Selecting previously unselected package python3-freetype. 106s Preparing to unpack .../127-python3-freetype_2.5.1-1_all.deb ... 106s Unpacking python3-freetype (2.5.1-1) ... 106s Selecting previously unselected package python3-rlpycairo. 106s Preparing to unpack .../128-python3-rlpycairo_0.3.0-3_all.deb ... 106s Unpacking python3-rlpycairo (0.3.0-3) ... 106s Selecting previously unselected package python3-reportlab. 106s Preparing to unpack .../129-python3-reportlab_4.4.2-1_all.deb ... 106s Unpacking python3-reportlab (4.4.2-1) ... 107s Selecting previously unselected package w3c-sgml-lib. 107s Preparing to unpack .../130-w3c-sgml-lib_1.3-3_all.deb ... 107s Unpacking w3c-sgml-lib (1.3-3) ... 107s Selecting previously unselected package python3-biopython. 107s Preparing to unpack .../131-python3-biopython_1.85+dfsg-4_s390x.deb ... 107s Unpacking python3-biopython (1.85+dfsg-4) ... 107s Selecting previously unselected package python3-brotli. 107s Preparing to unpack .../132-python3-brotli_1.1.0-2build5_s390x.deb ... 107s Unpacking python3-brotli (1.1.0-2build5) ... 107s Selecting previously unselected package python3-cftime. 107s Preparing to unpack .../133-python3-cftime_1.6.4-2_s390x.deb ... 107s Unpacking python3-cftime (1.6.4-2) ... 107s Selecting previously unselected package python3-lxml:s390x. 107s Preparing to unpack .../134-python3-lxml_6.0.1-1_s390x.deb ... 107s Unpacking python3-lxml:s390x (6.0.1-1) ... 107s Selecting previously unselected package python3-citeproc. 107s Preparing to unpack .../135-python3-citeproc_0.8.2-1_all.deb ... 107s Unpacking python3-citeproc (0.8.2-1) ... 107s Selecting previously unselected package python3-contourpy. 107s Preparing to unpack .../136-python3-contourpy_1.3.1-1build1_s390x.deb ... 107s Unpacking python3-contourpy (1.3.1-1build1) ... 107s Selecting previously unselected package python3-cycler. 107s Preparing to unpack .../137-python3-cycler_0.12.1-1_all.deb ... 107s Unpacking python3-cycler (0.12.1-1) ... 107s Selecting previously unselected package python3-dateutil. 107s Preparing to unpack .../138-python3-dateutil_2.9.0-4_all.deb ... 107s Unpacking python3-dateutil (2.9.0-4) ... 107s Selecting previously unselected package python3-decorator. 107s Preparing to unpack .../139-python3-decorator_5.2.1-2_all.deb ... 107s Unpacking python3-decorator (5.2.1-2) ... 107s Selecting previously unselected package python3-defusedxml. 107s Preparing to unpack .../140-python3-defusedxml_0.7.1-3_all.deb ... 107s Unpacking python3-defusedxml (0.7.1-3) ... 107s Selecting previously unselected package python3-roman. 107s Preparing to unpack .../141-python3-roman_5.1-1_all.deb ... 107s Unpacking python3-roman (5.1-1) ... 107s Selecting previously unselected package python3-docutils. 107s Preparing to unpack .../142-python3-docutils_0.21.2+dfsg-2_all.deb ... 107s Unpacking python3-docutils (0.21.2+dfsg-2) ... 107s Selecting previously unselected package python3-looseversion. 107s Preparing to unpack .../143-python3-looseversion_1.3.0-3_all.deb ... 107s Unpacking python3-looseversion (1.3.0-3) ... 107s Selecting previously unselected package python3-duecredit. 107s Preparing to unpack .../144-python3-duecredit_0.10.2-2_all.deb ... 107s Unpacking python3-duecredit (0.10.2-2) ... 107s Selecting previously unselected package python3-monotonic. 107s Preparing to unpack .../145-python3-monotonic_1.6-3_all.deb ... 107s Unpacking python3-monotonic (1.6-3) ... 107s Selecting previously unselected package python3-fasteners. 107s Preparing to unpack .../146-python3-fasteners_0.18-2_all.deb ... 107s Unpacking python3-fasteners (0.18-2) ... 107s Selecting previously unselected package python3-filelock. 107s Preparing to unpack .../147-python3-filelock_3.18.0-1_all.deb ... 107s Unpacking python3-filelock (3.18.0-1) ... 107s Selecting previously unselected package python3-platformdirs. 107s Preparing to unpack .../148-python3-platformdirs_4.3.7-1_all.deb ... 107s Unpacking python3-platformdirs (4.3.7-1) ... 107s Selecting previously unselected package python3-fs. 107s Preparing to unpack .../149-python3-fs_2.4.16-7_all.deb ... 107s Unpacking python3-fs (2.4.16-7) ... 107s Selecting previously unselected package python3-lz4. 107s Preparing to unpack .../150-python3-lz4_4.4.0+dfsg-2_s390x.deb ... 107s Unpacking python3-lz4 (4.4.0+dfsg-2) ... 107s Selecting previously unselected package python3-scipy. 107s Preparing to unpack .../151-python3-scipy_1.15.3-1_s390x.deb ... 107s Unpacking python3-scipy (1.15.3-1) ... 107s Selecting previously unselected package python3-mpmath. 107s Preparing to unpack .../152-python3-mpmath_1.3.0-1_all.deb ... 107s Unpacking python3-mpmath (1.3.0-1) ... 107s Selecting previously unselected package python3-sympy. 107s Preparing to unpack .../153-python3-sympy_1.13.3-5_all.deb ... 107s Unpacking python3-sympy (1.13.3-5) ... 107s Selecting previously unselected package python3-ufolib2. 107s Preparing to unpack .../154-python3-ufolib2_0.17.1+dfsg1-1_all.deb ... 107s Unpacking python3-ufolib2 (0.17.1+dfsg1-1) ... 107s Selecting previously unselected package python3-zopfli. 107s Preparing to unpack .../155-python3-zopfli_0.2.3.post1-1_s390x.deb ... 107s Unpacking python3-zopfli (0.2.3.post1-1) ... 107s Selecting previously unselected package unicode-data. 107s Preparing to unpack .../156-unicode-data_16.0.0-1_all.deb ... 107s Unpacking unicode-data (16.0.0-1) ... 108s Selecting previously unselected package python3-fonttools. 108s Preparing to unpack .../157-python3-fonttools_4.57.0-1_s390x.deb ... 108s Unpacking python3-fonttools (4.57.0-1) ... 108s Selecting previously unselected package sphinx-rtd-theme-common. 108s Preparing to unpack .../158-sphinx-rtd-theme-common_3.0.2+dfsg-3_all.deb ... 108s Unpacking sphinx-rtd-theme-common (3.0.2+dfsg-3) ... 108s Selecting previously unselected package python3-mrcfile. 108s Preparing to unpack .../159-python3-mrcfile_1.5.4-2_all.deb ... 108s Unpacking python3-mrcfile (1.5.4-2) ... 108s Selecting previously unselected package python3-griddataformats. 108s Preparing to unpack .../160-python3-griddataformats_1.0.2-2_all.deb ... 108s Unpacking python3-griddataformats (1.0.2-2) ... 108s Selecting previously unselected package python3-h5py-serial. 108s Preparing to unpack .../161-python3-h5py-serial_3.13.0-1ubuntu1_s390x.deb ... 108s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 108s Selecting previously unselected package python3-h5py. 108s Preparing to unpack .../162-python3-h5py_3.13.0-1ubuntu1_all.deb ... 108s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 108s Selecting previously unselected package python3-sortedcontainers. 108s Preparing to unpack .../163-python3-sortedcontainers_2.4.0-2_all.deb ... 108s Unpacking python3-sortedcontainers (2.4.0-2) ... 108s Selecting previously unselected package python3-hypothesis. 108s Preparing to unpack .../164-python3-hypothesis_6.130.5-2_all.deb ... 108s Unpacking python3-hypothesis (6.130.5-2) ... 108s Selecting previously unselected package python3-imagesize. 108s Preparing to unpack .../165-python3-imagesize_1.4.1-1_all.deb ... 108s Unpacking python3-imagesize (1.4.1-1) ... 108s Selecting previously unselected package python3-iniconfig. 108s Preparing to unpack .../166-python3-iniconfig_1.1.1-2_all.deb ... 108s Unpacking python3-iniconfig (1.1.1-2) ... 108s Selecting previously unselected package python3-joblib. 108s Preparing to unpack .../167-python3-joblib_1.4.2-4_all.deb ... 108s Unpacking python3-joblib (1.4.2-4) ... 108s Selecting previously unselected package python3-kiwisolver. 108s Preparing to unpack .../168-python3-kiwisolver_1.4.7-3build2_s390x.deb ... 108s Unpacking python3-kiwisolver (1.4.7-3build2) ... 108s Selecting previously unselected package python3-latexcodec. 108s Preparing to unpack .../169-python3-latexcodec_3.0.0-1_all.deb ... 108s Unpacking python3-latexcodec (3.0.0-1) ... 108s Selecting previously unselected package python3-matplotlib. 108s Preparing to unpack .../170-python3-matplotlib_3.10.1+dfsg1-4_s390x.deb ... 108s Unpacking python3-matplotlib (3.10.1+dfsg1-4) ... 108s Selecting previously unselected package python3-mda-xdrlib. 108s Preparing to unpack .../171-python3-mda-xdrlib_0.2.0-3_all.deb ... 108s Unpacking python3-mda-xdrlib (0.2.0-3) ... 108s Selecting previously unselected package python3-msgpack. 108s Preparing to unpack .../172-python3-msgpack_1.0.3-3build4_s390x.deb ... 108s Unpacking python3-msgpack (1.0.3-3build4) ... 108s Selecting previously unselected package python3-mmtf. 108s Preparing to unpack .../173-python3-mmtf_1.1.3-1_all.deb ... 108s Unpacking python3-mmtf (1.1.3-1) ... 108s Selecting previously unselected package python3-threadpoolctl. 108s Preparing to unpack .../174-python3-threadpoolctl_3.1.0-1_all.deb ... 108s Unpacking python3-threadpoolctl (3.1.0-1) ... 108s Selecting previously unselected package python3-tqdm. 108s Preparing to unpack .../175-python3-tqdm_4.67.1-5_all.deb ... 108s Unpacking python3-tqdm (4.67.1-5) ... 108s Selecting previously unselected package python3-mdanalysis. 108s Preparing to unpack .../176-python3-mdanalysis_2.9.0-12_s390x.deb ... 108s Unpacking python3-mdanalysis (2.9.0-12) ... 108s Selecting previously unselected package sphinx-common. 108s Preparing to unpack .../177-sphinx-common_8.2.3-1ubuntu2_all.deb ... 108s Unpacking sphinx-common (8.2.3-1ubuntu2) ... 108s Selecting previously unselected package python3-alabaster. 108s Preparing to unpack .../178-python3-alabaster_0.7.16-0.1_all.deb ... 108s Unpacking python3-alabaster (0.7.16-0.1) ... 108s Selecting previously unselected package python3-snowballstemmer. 108s Preparing to unpack .../179-python3-snowballstemmer_2.2.0-4build1_all.deb ... 108s Unpacking python3-snowballstemmer (2.2.0-4build1) ... 108s Selecting previously unselected package python3-sphinx. 108s Preparing to unpack .../180-python3-sphinx_8.2.3-1ubuntu2_all.deb ... 108s Unpacking python3-sphinx (8.2.3-1ubuntu2) ... 108s Selecting previously unselected package python3-sphinxcontrib.jquery. 108s Preparing to unpack .../181-python3-sphinxcontrib.jquery_4.1-6_all.deb ... 108s Unpacking python3-sphinxcontrib.jquery (4.1-6) ... 108s Selecting previously unselected package python3-sphinx-rtd-theme. 109s Preparing to unpack .../182-python3-sphinx-rtd-theme_3.0.2+dfsg-3_all.deb ... 109s Unpacking python3-sphinx-rtd-theme (3.0.2+dfsg-3) ... 109s Selecting previously unselected package python3-msmb-theme. 109s Preparing to unpack .../183-python3-msmb-theme_1.2.0-4_all.deb ... 109s Unpacking python3-msmb-theme (1.2.0-4) ... 109s Selecting previously unselected package python3-netcdf4. 109s Preparing to unpack .../184-python3-netcdf4_1.7.2-1build4_s390x.deb ... 109s Unpacking python3-netcdf4 (1.7.2-1build4) ... 109s Selecting previously unselected package python3-networkx. 109s Preparing to unpack .../185-python3-networkx_3.2.1-4ubuntu1_all.deb ... 109s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 109s Selecting previously unselected package python3-pytz. 109s Preparing to unpack .../186-python3-pytz_2025.2-3_all.deb ... 109s Unpacking python3-pytz (2025.2-3) ... 109s Selecting previously unselected package python3-pandas-lib:s390x. 109s Preparing to unpack .../187-python3-pandas-lib_2.2.3+dfsg-9_s390x.deb ... 109s Unpacking python3-pandas-lib:s390x (2.2.3+dfsg-9) ... 109s Selecting previously unselected package python3-pandas. 109s Preparing to unpack .../188-python3-pandas_2.2.3+dfsg-9_all.deb ... 109s Unpacking python3-pandas (2.2.3+dfsg-9) ... 109s Selecting previously unselected package python3-pluggy. 109s Preparing to unpack .../189-python3-pluggy_1.6.0-1_all.deb ... 109s Unpacking python3-pluggy (1.6.0-1) ... 109s Selecting previously unselected package python3-six. 109s Preparing to unpack .../190-python3-six_1.17.0-1_all.deb ... 109s Unpacking python3-six (1.17.0-1) ... 109s Selecting previously unselected package python3-pybtex. 109s Preparing to unpack .../191-python3-pybtex_0.24.0-4_all.deb ... 109s Unpacking python3-pybtex (0.24.0-4) ... 109s Selecting previously unselected package python3-pybtex-docutils. 109s Preparing to unpack .../192-python3-pybtex-docutils_1.0.2-1_all.deb ... 109s Unpacking python3-pybtex-docutils (1.0.2-1) ... 109s Selecting previously unselected package python3-pytest. 109s Preparing to unpack .../193-python3-pytest_8.4.2-1_all.deb ... 109s Unpacking python3-pytest (8.4.2-1) ... 109s Selecting previously unselected package python3-seaborn. 109s Preparing to unpack .../194-python3-seaborn_0.13.2-5_all.deb ... 109s Unpacking python3-seaborn (0.13.2-5) ... 109s Selecting previously unselected package python3-sklearn-lib:s390x. 109s Preparing to unpack .../195-python3-sklearn-lib_1.4.2+dfsg-8_s390x.deb ... 109s Unpacking python3-sklearn-lib:s390x (1.4.2+dfsg-8) ... 109s Selecting previously unselected package python3-sklearn. 109s Preparing to unpack .../196-python3-sklearn_1.4.2+dfsg-8_all.deb ... 109s Unpacking python3-sklearn (1.4.2+dfsg-8) ... 109s Selecting previously unselected package python3-sphinx-sitemap. 109s Preparing to unpack .../197-python3-sphinx-sitemap_2.6.0-1_all.deb ... 109s Unpacking python3-sphinx-sitemap (2.6.0-1) ... 109s Selecting previously unselected package python3-sphinxcontrib.bibtex. 109s Preparing to unpack .../198-python3-sphinxcontrib.bibtex_2.6.2-1_all.deb ... 109s Unpacking python3-sphinxcontrib.bibtex (2.6.2-1) ... 110s Setting up dh-python (6.20250414) ... 110s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 110s Setting up liblcms2-2:s390x (2.16-2) ... 110s Setting up python3-iniconfig (1.1.1-2) ... 110s Setting up libpixman-1-0:s390x (0.44.0-3) ... 110s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 110s Setting up python3-filelock (3.18.0-1) ... 110s Setting up fonts-lato (2.015-1) ... 110s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 110s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 110s Setting up libxrender1:s390x (1:0.9.12-1) ... 110s Setting up python3-joblib (1.4.2-4) ... 110s Setting up python3-lz4 (4.4.0+dfsg-2) ... 110s Setting up libxcb-render0:s390x (1.17.0-2build1) ... 110s Setting up python3-defusedxml (0.7.1-3) ... 110s Setting up libarchive-zip-perl (1.68-1) ... 110s Setting up python3-charset-normalizer (3.4.2-1) ... 110s Setting up python3-alabaster (0.7.16-0.1) ... 110s Setting up fonts-lyx (2.4.4-1) ... 110s Setting up libdebhelper-perl (13.24.2ubuntu1) ... 110s Setting up python3-tqdm (4.67.1-5) ... 110s Setting up python3-threadpoolctl (3.1.0-1) ... 111s Setting up x11-common (1:7.7+24ubuntu1) ... 111s Setting up libdeflate0:s390x (1.23-2) ... 111s Setting up m4 (1.4.19-8) ... 111s Setting up python3-latexcodec (3.0.0-1) ... 111s Setting up libqhull-r8.0:s390x (2020.2-6build1) ... 111s Setting up python3-all (3.13.7-1) ... 111s Setting up python3-pytz (2025.2-3) ... 111s Setting up libxcb-shm0:s390x (1.17.0-2build1) ... 111s Setting up python3-sortedcontainers (2.4.0-2) ... 111s Setting up libgomp1:s390x (15.2.0-5ubuntu1) ... 111s Setting up python3-networkx (3.2.1-4ubuntu1) ... 112s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 112s Setting up python3-mda-xdrlib (0.2.0-3) ... 112s Setting up libaec0:s390x (1.1.3-1) ... 112s Setting up python3-platformdirs (4.3.7-1) ... 112s Setting up python3-monotonic (1.6-3) ... 112s Setting up python3-fs (2.4.16-7) ... 112s Setting up unicode-data (16.0.0-1) ... 112s Setting up python3-six (1.17.0-1) ... 112s Setting up python3-roman (5.1-1) ... 112s Setting up python3-decorator (5.2.1-2) ... 113s Setting up libfontenc1:s390x (1:1.1.8-1build1) ... 113s Setting up autotools-dev (20240727.1) ... 113s Setting up libblas3:s390x (3.12.1-6build1) ... 113s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 113s Setting up python3-packaging (25.0-1) ... 113s Setting up libexpat1-dev:s390x (2.7.1-2) ... 113s Setting up python3-pyproject-hooks (1.2.0-1) ... 113s Setting up libzopfli1 (1.0.3-3) ... 113s Setting up libfreetype6:s390x (2.13.3+dfsg-1build1) ... 113s Setting up python3-snowballstemmer (2.2.0-4build1) ... 113s Setting up python3-brotli (1.1.0-2build5) ... 113s Setting up liblzf1:s390x (3.6-4) ... 113s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 113s Setting up python3-cycler (0.12.1-1) ... 113s Setting up libimagequant0:s390x (2.18.0-1build1) ... 113s Setting up fonts-dejavu-mono (2.37-8) ... 113s Setting up python3-kiwisolver (1.4.7-3build2) ... 113s Setting up libmpc3:s390x (1.3.1-1build3) ... 113s Setting up python3-numpy-dev:s390x (1:2.2.4+ds-1ubuntu1) ... 113s Setting up cython3 (3.0.11+dfsg-2ubuntu4) ... 114s Setting up libtcl8.6:s390x (8.6.17+dfsg-1) ... 114s Setting up autopoint (0.23.1-2build2) ... 114s Setting up fonts-dejavu-core (2.37-8) ... 114s Setting up python3-fasteners (0.18-2) ... 114s Setting up libjpeg-turbo8:s390x (2.1.5-4ubuntu2) ... 114s Setting up python3-installer (0.7.0+dfsg1-3) ... 114s Setting up libgfortran5:s390x (15.2.0-5ubuntu1) ... 114s Setting up autoconf (2.72-3.1ubuntu1) ... 114s Setting up python3-pluggy (1.6.0-1) ... 114s Setting up libwebp7:s390x (1.5.0-0.1) ... 114s Setting up python3-pybtex (0.24.0-4) ... 114s Setting up libubsan1:s390x (15.2.0-5ubuntu1) ... 114s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 114s Setting up dwz (0.16-2) ... 114s Setting up python3-looseversion (1.3.0-3) ... 114s Setting up libasan8:s390x (15.2.0-5ubuntu1) ... 114s Setting up libjson-perl (4.10000-1) ... 114s Setting up libxslt1.1:s390x (1.1.43-0.1) ... 114s Setting up debugedit (1:5.2-3) ... 114s Setting up libopenjp2-7:s390x (2.5.3-2.1) ... 114s Setting up libharfbuzz0b:s390x (12.1.0-1) ... 114s Setting up python3-dateutil (2.9.0-4) ... 114s Setting up sgml-base (1.31+nmu1) ... 114s Setting up python3-msgpack (1.0.3-3build4) ... 114s Setting up libxss1:s390x (1:1.2.3-1build3) ... 114s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 114s Setting up python3-mpmath (1.3.0-1) ... 115s Setting up libisl23:s390x (0.27-1) ... 115s Setting up python-matplotlib-data (3.10.1+dfsg1-4) ... 115s Setting up libwebpmux3:s390x (1.5.0-0.1) ... 115s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 115s Setting up sphinx-rtd-theme-common (3.0.2+dfsg-3) ... 115s Setting up libcc1-0:s390x (15.2.0-5ubuntu1) ... 115s Setting up libsz2:s390x (1.1.3-1) ... 115s Setting up libitm1:s390x (15.2.0-5ubuntu1) ... 115s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 115s Setting up python3-imagesize (1.4.1-1) ... 115s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 115s Setting up automake (1:1.17-4ubuntu1) ... 115s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 115s Setting up libfile-stripnondeterminism-perl (1.14.2-1) ... 115s Setting up python3-sympy (1.13.3-5) ... 121s Setting up liblapack3:s390x (3.12.1-6build1) ... 121s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 121s Setting up gettext (0.23.1-2build2) ... 121s Setting up libgcc-15-dev:s390x (15.2.0-5ubuntu1) ... 121s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 121s Setting up python3-pytest (8.4.2-1) ... 121s Setting up libwebpdemux2:s390x (1.5.0-0.1) ... 121s Setting up python3-hypothesis (6.130.5-2) ... 121s Setting up python3-freetype (2.5.1-1) ... 121s Setting up xfonts-utils (1:7.7+7) ... 121s Setting up python3-wheel (0.46.1-2) ... 121s Setting up python3-zopfli (0.2.3.post1-1) ... 122s Setting up intltool-debian (0.35.0+20060710.6) ... 122s Setting up libstdc++-15-dev:s390x (15.2.0-5ubuntu1) ... 122s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 122s Setting up libraqm0:s390x (0.10.3-1) ... 122s Setting up libpython3.13-dev:s390x (3.13.7-1) ... 122s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 123s Setting up libjs-sphinxdoc (8.2.3-1ubuntu2) ... 123s Setting up dh-strip-nondeterminism (1.14.2-1) ... 123s Setting up libhdf5-310:s390x (1.14.5+repack-3build1) ... 123s Setting up python3-lxml:s390x (6.0.1-1) ... 123s Setting up libtiff6:s390x (4.7.0-3ubuntu3) ... 123s Setting up xml-core (0.19) ... 123s Setting up cpp-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 123s Setting up python3-contourpy (1.3.1-1build1) ... 123s Setting up libfontconfig1:s390x (2.15.0-2.3ubuntu1) ... 123s Setting up python3-build (1.2.2-2) ... 123s Setting up gcc-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 123s Setting up python3-mrcfile (1.5.4-2) ... 123s Setting up g++-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 123s Setting up libhdf5-hl-310:s390x (1.14.5+repack-3build1) ... 123s Setting up libxft2:s390x (2.3.6-1build1) ... 123s Setting up python3-scipy (1.15.3-1) ... 127s Setting up libpython3-dev:s390x (3.13.7-1) ... 127s Setting up cpp-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 127s Setting up python3-citeproc (0.8.2-1) ... 127s Setting up pybuild-plugin-pyproject (6.20250414) ... 127s Setting up python3.13-dev (3.13.7-1) ... 127s Setting up po-debconf (1.0.21+nmu1) ... 127s Setting up libtk8.6:s390x (8.6.17-1) ... 127s Setting up python3-pandas-lib:s390x (2.2.3+dfsg-9) ... 127s Setting up libnetcdf22:s390x (1:4.9.3-1build1) ... 127s Setting up python3-sklearn-lib:s390x (1.4.2+dfsg-8) ... 127s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 127s Setting up python3-mmtf (1.1.3-1) ... 127s Setting up fonts-urw-base35 (20200910-8) ... 127s Setting up libcairo2:s390x (1.18.4-1build1) ... 127s Setting up python3.13-tk (3.13.7-1) ... 127s Setting up python-mdanalysis-doc (2.9.0-12) ... 127s Setting up python3-pil:s390x (11.3.0-1ubuntu1) ... 128s Setting up python3-griddataformats (1.0.2-2) ... 128s Setting up python3-pandas (2.2.3+dfsg-9) ... 132s Setting up gcc-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 132s Setting up libpython3-all-dev:s390x (3.13.7-1) ... 132s Setting up sphinx-common (8.2.3-1ubuntu2) ... 132s Setting up python3-dev (3.13.7-1) ... 132s Setting up python3-h5py (3.13.0-1ubuntu1) ... 132s Setting up python3-sklearn (1.4.2+dfsg-8) ... 133s Setting up python3-cftime (1.6.4-2) ... 133s Setting up cpp-15 (15.2.0-5ubuntu1) ... 133s Setting up cpp (4:15.2.0-4ubuntu1) ... 133s Setting up python3-netcdf4 (1.7.2-1build4) ... 133s Setting up python3-all-dev (3.13.7-1) ... 133s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 133s Setting up python3-cairo (1.27.0-2build1) ... 133s Setting up python3-duecredit (0.10.2-2) ... 134s Setting up blt (2.5.3+dfsg-8) ... 134s Setting up python3-tk:s390x (3.13.5-1) ... 134s Setting up g++-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 134s Setting up gcc-15 (15.2.0-5ubuntu1) ... 134s Setting up python3-pil.imagetk:s390x (11.3.0-1ubuntu1) ... 134s Setting up python3-rlpycairo (0.3.0-3) ... 134s Setting up python3-reportlab (4.4.2-1) ... 134s Setting up g++-15 (15.2.0-5ubuntu1) ... 134s Setting up libtool (2.5.4-4build1) ... 134s Setting up gcc (4:15.2.0-4ubuntu1) ... 134s Setting up dh-autoreconf (21) ... 134s Setting up g++ (4:15.2.0-4ubuntu1) ... 134s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 134s Setting up build-essential (12.12ubuntu1) ... 134s Setting up debhelper (13.24.2ubuntu1) ... 134s Setting up python3-ufolib2 (0.17.1+dfsg1-1) ... 134s Setting up python3-fonttools (4.57.0-1) ... 135s Setting up python3-matplotlib (3.10.1+dfsg1-4) ... 137s Setting up python3-seaborn (0.13.2-5) ... 137s Processing triggers for man-db (2.13.1-1) ... 138s Processing triggers for install-info (7.1.1-1ubuntu1) ... 138s Processing triggers for libc-bin (2.42-0ubuntu3) ... 138s Processing triggers for sgml-base (1.31+nmu1) ... 138s Setting up docutils-common (0.21.2+dfsg-2) ... 138s Setting up w3c-sgml-lib (1.3-3) ... 159s Setting up python3-biopython (1.85+dfsg-4) ... 160s Setting up python3-mdanalysis (2.9.0-12) ... 160s Processing triggers for sgml-base (1.31+nmu1) ... 160s Setting up python3-docutils (0.21.2+dfsg-2) ... 161s Setting up python3-pybtex-docutils (1.0.2-1) ... 161s Setting up python3-sphinx (8.2.3-1ubuntu2) ... 161s Setting up python3-sphinxcontrib.bibtex (2.6.2-1) ... 161s Setting up python3-sphinx-sitemap (2.6.0-1) ... 161s Setting up python3-sphinxcontrib.jquery (4.1-6) ... 161s Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-3) ... 162s Setting up python3-msmb-theme (1.2.0-4) ... 163s autopkgtest [16:20:24]: test test-mdanalysis: [----------------------- 163s mdanalysis tests are not stable, see Bug#1108309 and https://github.com/MDAnalysis/mdanalysis/issues/5078 163s hence skipping tests 163s autopkgtest [16:20:24]: test test-mdanalysis: -----------------------] 164s test-mdanalysis FLAKY non-zero exit status 2 164s autopkgtest [16:20:25]: test test-mdanalysis: - - - - - - - - - - results - - - - - - - - - - 164s autopkgtest [16:20:25]: @@@@@@@@@@@@@@@@@@@@ summary 164s test-mdanalysis FLAKY non-zero exit status 2