0s autopkgtest [08:42:56]: starting date and time: 2026-01-23 08:42:56+0000 0s autopkgtest [08:42:56]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [08:42:56]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.i7cto3fx/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade lefse --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.14.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-s390x-11.secgroup --name adt-resolute-s390x-lefse-20260123-084256-juju-7f2275-prod-proposed-migration-environment-2-d62f2dd0-f962-47cc-922d-e11c25c2e547 --image adt/ubuntu-resolute-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 5s Creating nova instance adt-resolute-s390x-lefse-20260123-084256-juju-7f2275-prod-proposed-migration-environment-2-d62f2dd0-f962-47cc-922d-e11c25c2e547 from image adt/ubuntu-resolute-s390x-server-20260123.img (UUID 5f2e306c-5dfc-4ef6-8be2-414f657c7562)... 79s autopkgtest [08:44:15]: testbed dpkg architecture: s390x 79s autopkgtest [08:44:15]: testbed apt version: 3.1.13 79s autopkgtest [08:44:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 79s autopkgtest [08:44:15]: testbed release detected to be: None 80s autopkgtest [08:44:16]: updating testbed package index (apt update) 80s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 80s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 80s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 80s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 80s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [23.6 kB] 80s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1058 kB] 81s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [95.5 kB] 81s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2820 B] 81s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x Packages [113 kB] 81s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe s390x Packages [847 kB] 81s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse s390x Packages [9152 B] 81s Fetched 2273 kB in 1s (2241 kB/s) 85s Reading package lists... 86s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 86s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 86s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 86s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 89s Reading package lists... 89s Reading package lists... 90s Building dependency tree... 90s Reading state information... 91s Calculating upgrade... 92s The following packages were automatically installed and are no longer required: 92s python3.13 python3.13-minimal 92s Use 'sudo apt autoremove' to remove them. 92s The following NEW packages will be installed: 92s libpython3.14-minimal libpython3.14-stdlib python3.14 python3.14-minimal 92s The following packages will be upgraded: 92s libpython3-stdlib python3 python3-gdbm python3-minimal 93s 4 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 93s Need to get 6689 kB of archives. 93s After this operation, 24.3 MB of additional disk space will be used. 93s Get:1 http://ftpmaster.internal/ubuntu resolute/main s390x libpython3.14-minimal s390x 3.14.2-1 [917 kB] 94s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x python3.14-minimal s390x 3.14.2-1 [2510 kB] 95s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x python3-minimal s390x 3.14.2-1 [28.2 kB] 95s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x python3 s390x 3.14.2-1 [22.9 kB] 95s Get:5 http://ftpmaster.internal/ubuntu resolute/main s390x libpython3.14-stdlib s390x 3.14.2-1 [2373 kB] 95s Get:6 http://ftpmaster.internal/ubuntu resolute/main s390x python3.14 s390x 3.14.2-1 [816 kB] 95s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x libpython3-stdlib s390x 3.14.2-1 [10.9 kB] 95s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x python3-gdbm s390x 3.14.2-1 [11.1 kB] 97s dpkg-preconfigure: unable to re-open stdin: No such file or directory 97s Fetched 6689 kB in 3s (1956 kB/s) 98s Selecting previously unselected package libpython3.14-minimal:s390x. 98s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 87685 files and directories currently installed.) 98s Preparing to unpack .../libpython3.14-minimal_3.14.2-1_s390x.deb ... 98s Unpacking libpython3.14-minimal:s390x (3.14.2-1) ... 98s Selecting previously unselected package python3.14-minimal. 98s Preparing to unpack .../python3.14-minimal_3.14.2-1_s390x.deb ... 98s Unpacking python3.14-minimal (3.14.2-1) ... 98s Setting up libpython3.14-minimal:s390x (3.14.2-1) ... 99s Setting up python3.14-minimal (3.14.2-1) ... 103s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88027 files and directories currently installed.) 103s Preparing to unpack .../python3-minimal_3.14.2-1_s390x.deb ... 103s Unpacking python3-minimal (3.14.2-1) over (3.13.9-3) ... 104s Setting up python3-minimal (3.14.2-1) ... 104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88027 files and directories currently installed.) 104s Preparing to unpack .../python3_3.14.2-1_s390x.deb ... 105s running python pre-rtupdate hooks for python3.14... 105s Unpacking python3 (3.14.2-1) over (3.13.9-3) ... 105s Selecting previously unselected package libpython3.14-stdlib:s390x. 105s Preparing to unpack .../libpython3.14-stdlib_3.14.2-1_s390x.deb ... 105s Unpacking libpython3.14-stdlib:s390x (3.14.2-1) ... 105s Selecting previously unselected package python3.14. 105s Preparing to unpack .../python3.14_3.14.2-1_s390x.deb ... 105s Unpacking python3.14 (3.14.2-1) ... 105s Preparing to unpack .../libpython3-stdlib_3.14.2-1_s390x.deb ... 105s Unpacking libpython3-stdlib:s390x (3.14.2-1) over (3.13.9-3) ... 105s Preparing to unpack .../python3-gdbm_3.14.2-1_s390x.deb ... 105s Unpacking python3-gdbm (3.14.2-1) over (3.13.9-3) ... 105s Setting up libpython3.14-stdlib:s390x (3.14.2-1) ... 105s Setting up python3.14 (3.14.2-1) ... 111s Setting up libpython3-stdlib:s390x (3.14.2-1) ... 111s Setting up python3-gdbm (3.14.2-1) ... 111s Setting up python3 (3.14.2-1) ... 111s running python rtupdate hooks for python3.14... 111s running python post-rtupdate hooks for python3.14... 111s Processing triggers for man-db (2.13.1-1) ... 115s Processing triggers for systemd (259-1ubuntu2) ... 116s autopkgtest [08:44:52]: upgrading testbed (apt dist-upgrade and autopurge) 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 117s Calculating upgrade... 119s The following packages were automatically installed and are no longer required: 119s python3.13 python3.13-minimal 119s Use 'sudo apt autoremove' to remove them. 119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 120s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s Solving dependencies... 121s The following packages will be REMOVED: 121s python3.13* python3.13-minimal* 122s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 122s After this operation, 8012 kB disk space will be freed. 122s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88457 files and directories currently installed.) 122s Removing python3.13 (3.13.11-1) ... 122s Removing python3.13-minimal (3.13.11-1) ... 127s Processing triggers for man-db (2.13.1-1) ... 128s Processing triggers for systemd (259-1ubuntu2) ... 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88430 files and directories currently installed.) 128s Purging configuration files for python3.13-minimal (3.13.11-1) ... 132s autopkgtest [08:45:08]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP Mon Jan 12 15:39:23 UTC 2026 132s autopkgtest [08:45:08]: @@@@@@@@@@@@@@@@@@@@ apt-source lefse 134s Get:1 http://ftpmaster.internal/ubuntu resolute/universe lefse 1.1.2-2build1 (dsc) [1969 B] 134s Get:2 http://ftpmaster.internal/ubuntu resolute/universe lefse 1.1.2-2build1 (tar) [64.1 kB] 134s Get:3 http://ftpmaster.internal/ubuntu resolute/universe lefse 1.1.2-2build1 (diff) [13.0 kB] 134s gpgv: Signature made Thu Jan 22 12:30:38 2026 UTC 134s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 134s gpgv: Can't check signature: No public key 134s dpkg-source: warning: cannot verify inline signature for ./lefse_1.1.2-2build1.dsc: no acceptable signature found 135s autopkgtest [08:45:11]: testing package lefse version 1.1.2-2build1 135s autopkgtest [08:45:11]: build not needed 136s autopkgtest [08:45:12]: test run-unit-test: preparing testbed 137s Reading package lists... 138s Building dependency tree... 138s Reading state information... 139s Solving dependencies... 140s The following NEW packages will be installed: 140s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx 140s lefse libaec0 libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1 140s libfreetype6 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 140s libhdf5-hl-310 libice6 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 140s liblapack3 liblcms2-2 liblzf1 libopenjp2-7 libpango-1.0-0 140s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 140s libqhull-r8.0 libraqm0 libsharpyuv0 libsm6 libsz2 libtcl8.6 libthai-data 140s libthai0 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 140s libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 libxt6t64 libzopfli1 140s python-matplotlib-data python3-biom-format python3-brotli python3-click 140s python3-contourpy python3-cycler python3-decorator python3-fonttools 140s python3-h5py python3-h5py-serial python3-kiwisolver python3-lxml python3-lz4 140s python3-matplotlib python3-mpmath python3-numpy python3-numpy-dev 140s python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk 140s python3-pytz python3-rpy2 python3-scipy python3-sympy python3-tk 140s python3-tzlocal python3-ufolib2 python3-unicodedata2 python3-zopfli 140s python3.13-tk python3.14-tk r-base-core r-cran-codetools r-cran-coin 140s r-cran-lattice r-cran-libcoin r-cran-mass r-cran-matrix r-cran-matrixstats 140s r-cran-modeltools r-cran-multcomp r-cran-mvtnorm r-cran-sandwich 140s r-cran-survival r-cran-th.data r-cran-zoo unicode-data unzip x11-common 140s xdg-utils zip 140s 0 upgraded, 107 newly installed, 0 to remove and 0 not upgraded. 140s Need to get 153 MB of archives. 140s After this operation, 514 MB of additional disk space will be used. 140s Get:1 http://ftpmaster.internal/ubuntu resolute/main s390x python3-numpy-dev s390x 1:2.3.5+ds-3 [146 kB] 140s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x libblas3 s390x 3.12.1-7ubuntu1 [255 kB] 140s Get:3 http://ftpmaster.internal/ubuntu resolute/main s390x libgfortran5 s390x 15.2.0-11ubuntu1 [629 kB] 140s Get:4 http://ftpmaster.internal/ubuntu resolute/main s390x liblapack3 s390x 3.12.1-7ubuntu1 [2983 kB] 141s Get:5 http://ftpmaster.internal/ubuntu resolute/main s390x python3-numpy s390x 1:2.3.5+ds-3 [5305 kB] 141s Get:6 http://ftpmaster.internal/ubuntu resolute/main s390x libfreetype6 s390x 2.14.1+dfsg-2 [443 kB] 141s Get:7 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-dejavu-mono all 2.37-8build1 [502 kB] 141s Get:8 http://ftpmaster.internal/ubuntu resolute/main s390x fonts-dejavu-core all 2.37-8build1 [834 kB] 141s Get:9 http://ftpmaster.internal/ubuntu resolute/main s390x fontconfig-config s390x 2.15.0-2.4ubuntu1 [38.2 kB] 141s Get:10 http://ftpmaster.internal/ubuntu resolute/main s390x libfontconfig1 s390x 2.15.0-2.4ubuntu1 [150 kB] 141s Get:11 http://ftpmaster.internal/ubuntu resolute/main s390x fontconfig s390x 2.15.0-2.4ubuntu1 [191 kB] 141s Get:12 http://ftpmaster.internal/ubuntu resolute/universe s390x fonts-lyx all 2.5.0~RC2-3 [171 kB] 141s Get:13 http://ftpmaster.internal/ubuntu resolute/universe s390x libaec0 s390x 1.1.4-2 [26.1 kB] 141s Get:14 http://ftpmaster.internal/ubuntu resolute/universe s390x libsz2 s390x 1.1.4-2 [5628 B] 141s Get:15 http://ftpmaster.internal/ubuntu resolute/universe s390x libhdf5-310 s390x 1.14.5+repack-4 [1472 kB] 141s Get:16 http://ftpmaster.internal/ubuntu resolute/universe s390x libhdf5-hl-310 s390x 1.14.5+repack-4 [60.9 kB] 141s Get:17 http://ftpmaster.internal/ubuntu resolute/universe s390x liblzf1 s390x 3.6-4build1 [7046 B] 141s Get:18 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-h5py-serial s390x 3.15.1-4 [1698 kB] 141s Get:19 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-h5py all 3.15.1-4 [11.3 kB] 141s Get:20 http://ftpmaster.internal/ubuntu resolute/main s390x python3-click all 8.2.0+0.really.8.1.8-1build1 [80.2 kB] 141s Get:21 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pytz all 2025.2-5 [32.4 kB] 141s Get:22 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pandas-lib s390x 2.3.3+dfsg-3 [7599 kB] 141s Get:23 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pandas all 2.3.3+dfsg-3 [2948 kB] 141s Get:24 http://ftpmaster.internal/ubuntu resolute/main s390x python3-decorator all 5.2.1-2 [28.1 kB] 141s Get:25 http://ftpmaster.internal/ubuntu resolute/universe s390x libqhull-r8.0 s390x 2020.2-8 [199 kB] 141s Get:26 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-scipy s390x 1.16.3-3 [19.6 MB] 142s Get:27 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-biom-format s390x 2.1.17-1 [231 kB] 142s Get:28 http://ftpmaster.internal/ubuntu resolute/universe s390x python-matplotlib-data all 3.10.7+dfsg1-1 [2930 kB] 142s Get:29 http://ftpmaster.internal/ubuntu resolute/main s390x libgomp1 s390x 15.2.0-11ubuntu1 [154 kB] 142s Get:30 http://ftpmaster.internal/ubuntu resolute/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 142s Get:31 http://ftpmaster.internal/ubuntu resolute/main s390x libjpeg-turbo8 s390x 2.1.5-4ubuntu2 [147 kB] 142s Get:32 http://ftpmaster.internal/ubuntu resolute/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 142s Get:33 http://ftpmaster.internal/ubuntu resolute/main s390x liblcms2-2 s390x 2.17-1 [176 kB] 142s Get:34 http://ftpmaster.internal/ubuntu resolute/main s390x libopenjp2-7 s390x 2.5.4-1 [208 kB] 142s Get:35 http://ftpmaster.internal/ubuntu resolute/main s390x libgraphite2-3 s390x 1.3.14-11ubuntu1 [80.5 kB] 142s Get:36 http://ftpmaster.internal/ubuntu resolute/main s390x libharfbuzz0b s390x 12.3.0-4 [569 kB] 142s Get:37 http://ftpmaster.internal/ubuntu resolute/main s390x libraqm0 s390x 0.10.3-1 [15.6 kB] 142s Get:38 http://ftpmaster.internal/ubuntu resolute/main s390x libdeflate0 s390x 1.23-2 [46.0 kB] 142s Get:39 http://ftpmaster.internal/ubuntu resolute/main s390x libjbig0 s390x 2.1-6.1ubuntu3 [32.8 kB] 142s Get:40 http://ftpmaster.internal/ubuntu resolute/main s390x libsharpyuv0 s390x 1.5.0-0.1build1 [16.6 kB] 142s Get:41 http://ftpmaster.internal/ubuntu resolute/main s390x libwebp7 s390x 1.5.0-0.1build1 [227 kB] 142s Get:42 http://ftpmaster.internal/ubuntu resolute/main s390x libtiff6 s390x 4.7.0-3ubuntu3 [222 kB] 142s Get:43 http://ftpmaster.internal/ubuntu resolute/main s390x libwebpdemux2 s390x 1.5.0-0.1build1 [12.5 kB] 142s Get:44 http://ftpmaster.internal/ubuntu resolute/main s390x libwebpmux3 s390x 1.5.0-0.1build1 [25.7 kB] 142s Get:45 http://ftpmaster.internal/ubuntu resolute/main s390x python3-pil s390x 12.0.0-1ubuntu1 [540 kB] 142s Get:46 http://ftpmaster.internal/ubuntu resolute/main s390x libtcl8.6 s390x 8.6.17+dfsg-1 [1034 kB] 142s Get:47 http://ftpmaster.internal/ubuntu resolute/main s390x libxrender1 s390x 1:0.9.12-1 [20.9 kB] 142s Get:48 http://ftpmaster.internal/ubuntu resolute/main s390x libxft2 s390x 2.3.6-1build2 [48.0 kB] 142s Get:49 http://ftpmaster.internal/ubuntu resolute/main s390x x11-common all 1:7.7+24ubuntu1 [22.4 kB] 142s Get:50 http://ftpmaster.internal/ubuntu resolute/main s390x libxss1 s390x 1:1.2.3-1build4 [7138 B] 142s Get:51 http://ftpmaster.internal/ubuntu resolute/main s390x libtk8.6 s390x 8.6.17-1 [828 kB] 142s Get:52 http://ftpmaster.internal/ubuntu resolute/main s390x python3.13-tk s390x 3.13.11-1 [109 kB] 142s Get:53 http://ftpmaster.internal/ubuntu resolute/main s390x python3.14-tk s390x 3.14.2-1 [110 kB] 142s Get:54 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x python3-tk s390x 3.14.2-1 [11.2 kB] 142s Get:55 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-pil.imagetk s390x 12.0.0-1ubuntu1 [9884 B] 142s Get:56 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-contourpy s390x 1.3.3-1 [266 kB] 142s Get:57 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-cycler all 0.12.1-2 [9850 B] 142s Get:58 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-brotli s390x 1.1.0-2build6 [386 kB] 142s Get:59 http://ftpmaster.internal/ubuntu resolute/main s390x libxslt1.1 s390x 1.1.43-0.3 [163 kB] 142s Get:60 http://ftpmaster.internal/ubuntu resolute/main s390x python3-lxml s390x 6.0.2-1 [2478 kB] 142s Get:61 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-lz4 s390x 4.4.5+dfsg-1 [27.5 kB] 142s Get:62 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-mpmath all 1.3.0-2 [423 kB] 142s Get:63 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-sympy all 1.14.0-2 [4306 kB] 143s Get:64 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-ufolib2 all 0.18.1+dfsg1-1 [33.7 kB] 143s Get:65 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-unicodedata2 s390x 16.0.0+ds-1build1 [399 kB] 143s Get:66 http://ftpmaster.internal/ubuntu resolute/universe s390x libzopfli1 s390x 1.0.3-3 [124 kB] 143s Get:67 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-zopfli s390x 0.4.0-1 [11.2 kB] 143s Get:68 http://ftpmaster.internal/ubuntu resolute/universe s390x unicode-data all 16.0.0-1build1 [9543 kB] 143s Get:69 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-fonttools s390x 4.61.1-3 [1788 kB] 143s Get:70 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-kiwisolver s390x 1.4.10~rc0-1 [65.0 kB] 143s Get:71 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-matplotlib s390x 3.10.7+dfsg1-1 [17.2 MB] 143s Get:72 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-tzlocal all 5.3.1-2 [20.8 kB] 143s Get:73 http://ftpmaster.internal/ubuntu resolute/main s390x zip s390x 3.0-15ubuntu2 [187 kB] 143s Get:74 http://ftpmaster.internal/ubuntu resolute/main s390x unzip s390x 6.0-29ubuntu1 [185 kB] 143s Get:75 http://ftpmaster.internal/ubuntu resolute/main s390x libpaper2 s390x 2.2.5-0.3build1 [17.3 kB] 143s Get:76 http://ftpmaster.internal/ubuntu resolute/main s390x libpaper-utils s390x 2.2.5-0.3build1 [15.3 kB] 143s Get:77 http://ftpmaster.internal/ubuntu resolute/main s390x xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 143s Get:78 http://ftpmaster.internal/ubuntu resolute/main s390x libpixman-1-0 s390x 0.46.4-1 [217 kB] 143s Get:79 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-render0 s390x 1.17.0-2build1 [16.9 kB] 143s Get:80 http://ftpmaster.internal/ubuntu resolute/main s390x libxcb-shm0 s390x 1.17.0-2build1 [5916 B] 143s Get:81 http://ftpmaster.internal/ubuntu resolute/main s390x libcairo2 s390x 1.18.4-3 [578 kB] 143s Get:82 http://ftpmaster.internal/ubuntu resolute/main s390x libthai-data all 0.1.30-1 [155 kB] 143s Get:83 http://ftpmaster.internal/ubuntu resolute/main s390x libdatrie1 s390x 0.2.14-1 [20.7 kB] 143s Get:84 http://ftpmaster.internal/ubuntu resolute/main s390x libthai0 s390x 0.1.30-1 [20.8 kB] 143s Get:85 http://ftpmaster.internal/ubuntu resolute/main s390x libpango-1.0-0 s390x 1.56.4-1 [254 kB] 143s Get:86 http://ftpmaster.internal/ubuntu resolute/main s390x libpangoft2-1.0-0 s390x 1.56.4-1 [52.9 kB] 143s Get:87 http://ftpmaster.internal/ubuntu resolute/main s390x libpangocairo-1.0-0 s390x 1.56.4-1 [28.5 kB] 143s Get:88 http://ftpmaster.internal/ubuntu resolute/main s390x libice6 s390x 2:1.1.1-1build1 [46.2 kB] 143s Get:89 http://ftpmaster.internal/ubuntu resolute/main s390x libsm6 s390x 2:1.2.6-1 [18.3 kB] 143s Get:90 http://ftpmaster.internal/ubuntu resolute/main s390x libxt6t64 s390x 1:1.2.1-1.3 [180 kB] 143s Get:91 http://ftpmaster.internal/ubuntu resolute/universe s390x r-base-core s390x 4.5.2-1ubuntu2 [28.9 MB] 144s Get:92 http://ftpmaster.internal/ubuntu resolute/universe s390x python3-rpy2 s390x 3.6.4-2 [221 kB] 144s Get:93 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-lattice s390x 0.22-7-1 [1365 kB] 144s Get:94 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-matrix s390x 1.7-4-1 [4444 kB] 145s Get:95 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-survival s390x 3.8-3-1 [8250 kB] 145s Get:96 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-mvtnorm s390x 1.3-3-1 [924 kB] 145s Get:97 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-libcoin s390x 1.0-10-1 [774 kB] 145s Get:98 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-matrixstats s390x 1.5.0-1 [539 kB] 145s Get:99 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-modeltools all 0.2-24-1 [224 kB] 145s Get:100 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-mass s390x 7.3-65-1 [1114 kB] 145s Get:101 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-th.data all 1.1-5-1 [8740 kB] 146s Get:102 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-zoo s390x 1.8-15-1 [1026 kB] 146s Get:103 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-sandwich all 3.1-1-1 [1483 kB] 146s Get:104 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-codetools all 0.2-20-1build1 [91.1 kB] 146s Get:105 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-multcomp all 1.4-29-1 [617 kB] 146s Get:106 http://ftpmaster.internal/ubuntu resolute/universe s390x r-cran-coin s390x 1.4-3-1 [1562 kB] 146s Get:107 http://ftpmaster.internal/ubuntu resolute/universe s390x lefse all 1.1.2-2build1 [58.0 kB] 147s Preconfiguring packages ... 148s Fetched 153 MB in 6s (24.5 MB/s) 148s Selecting previously unselected package python3-numpy-dev:s390x. 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88432 files and directories currently installed.) 148s Preparing to unpack .../000-python3-numpy-dev_1%3a2.3.5+ds-3_s390x.deb ... 148s Unpacking python3-numpy-dev:s390x (1:2.3.5+ds-3) ... 148s Selecting previously unselected package libblas3:s390x. 148s Preparing to unpack .../001-libblas3_3.12.1-7ubuntu1_s390x.deb ... 148s Unpacking libblas3:s390x (3.12.1-7ubuntu1) ... 148s Selecting previously unselected package libgfortran5:s390x. 148s Preparing to unpack .../002-libgfortran5_15.2.0-11ubuntu1_s390x.deb ... 148s Unpacking libgfortran5:s390x (15.2.0-11ubuntu1) ... 148s Selecting previously unselected package liblapack3:s390x. 148s Preparing to unpack .../003-liblapack3_3.12.1-7ubuntu1_s390x.deb ... 148s Unpacking liblapack3:s390x (3.12.1-7ubuntu1) ... 148s Selecting previously unselected package python3-numpy. 148s Preparing to unpack .../004-python3-numpy_1%3a2.3.5+ds-3_s390x.deb ... 148s Unpacking python3-numpy (1:2.3.5+ds-3) ... 149s Selecting previously unselected package libfreetype6:s390x. 149s Preparing to unpack .../005-libfreetype6_2.14.1+dfsg-2_s390x.deb ... 149s Unpacking libfreetype6:s390x (2.14.1+dfsg-2) ... 149s Selecting previously unselected package fonts-dejavu-mono. 149s Preparing to unpack .../006-fonts-dejavu-mono_2.37-8build1_all.deb ... 149s Unpacking fonts-dejavu-mono (2.37-8build1) ... 149s Selecting previously unselected package fonts-dejavu-core. 149s Preparing to unpack .../007-fonts-dejavu-core_2.37-8build1_all.deb ... 149s Unpacking fonts-dejavu-core (2.37-8build1) ... 149s Selecting previously unselected package fontconfig-config. 149s Preparing to unpack .../008-fontconfig-config_2.15.0-2.4ubuntu1_s390x.deb ... 150s Unpacking fontconfig-config (2.15.0-2.4ubuntu1) ... 150s Selecting previously unselected package libfontconfig1:s390x. 150s Preparing to unpack .../009-libfontconfig1_2.15.0-2.4ubuntu1_s390x.deb ... 150s Unpacking libfontconfig1:s390x (2.15.0-2.4ubuntu1) ... 150s Selecting previously unselected package fontconfig. 150s Preparing to unpack .../010-fontconfig_2.15.0-2.4ubuntu1_s390x.deb ... 150s Unpacking fontconfig (2.15.0-2.4ubuntu1) ... 150s Selecting previously unselected package fonts-lyx. 150s Preparing to unpack .../011-fonts-lyx_2.5.0~RC2-3_all.deb ... 150s Unpacking fonts-lyx (2.5.0~RC2-3) ... 150s Selecting previously unselected package libaec0:s390x. 150s Preparing to unpack .../012-libaec0_1.1.4-2_s390x.deb ... 150s Unpacking libaec0:s390x (1.1.4-2) ... 150s Selecting previously unselected package libsz2:s390x. 150s Preparing to unpack .../013-libsz2_1.1.4-2_s390x.deb ... 150s Unpacking libsz2:s390x (1.1.4-2) ... 150s Selecting previously unselected package libhdf5-310:s390x. 150s Preparing to unpack .../014-libhdf5-310_1.14.5+repack-4_s390x.deb ... 150s Unpacking libhdf5-310:s390x (1.14.5+repack-4) ... 150s Selecting previously unselected package libhdf5-hl-310:s390x. 150s Preparing to unpack .../015-libhdf5-hl-310_1.14.5+repack-4_s390x.deb ... 150s Unpacking libhdf5-hl-310:s390x (1.14.5+repack-4) ... 150s Selecting previously unselected package liblzf1:s390x. 150s Preparing to unpack .../016-liblzf1_3.6-4build1_s390x.deb ... 150s Unpacking liblzf1:s390x (3.6-4build1) ... 150s Selecting previously unselected package python3-h5py-serial. 150s Preparing to unpack .../017-python3-h5py-serial_3.15.1-4_s390x.deb ... 150s Unpacking python3-h5py-serial (3.15.1-4) ... 151s Selecting previously unselected package python3-h5py. 151s Preparing to unpack .../018-python3-h5py_3.15.1-4_all.deb ... 151s Unpacking python3-h5py (3.15.1-4) ... 151s Selecting previously unselected package python3-click. 151s Preparing to unpack .../019-python3-click_8.2.0+0.really.8.1.8-1build1_all.deb ... 151s Unpacking python3-click (8.2.0+0.really.8.1.8-1build1) ... 151s Selecting previously unselected package python3-pytz. 151s Preparing to unpack .../020-python3-pytz_2025.2-5_all.deb ... 151s Unpacking python3-pytz (2025.2-5) ... 151s Selecting previously unselected package python3-pandas-lib:s390x. 151s Preparing to unpack .../021-python3-pandas-lib_2.3.3+dfsg-3_s390x.deb ... 151s Unpacking python3-pandas-lib:s390x (2.3.3+dfsg-3) ... 152s Selecting previously unselected package python3-pandas. 152s Preparing to unpack .../022-python3-pandas_2.3.3+dfsg-3_all.deb ... 152s Unpacking python3-pandas (2.3.3+dfsg-3) ... 153s Selecting previously unselected package python3-decorator. 153s Preparing to unpack .../023-python3-decorator_5.2.1-2_all.deb ... 153s Unpacking python3-decorator (5.2.1-2) ... 153s Selecting previously unselected package libqhull-r8.0:s390x. 153s Preparing to unpack .../024-libqhull-r8.0_2020.2-8_s390x.deb ... 153s Unpacking libqhull-r8.0:s390x (2020.2-8) ... 153s Selecting previously unselected package python3-scipy. 153s Preparing to unpack .../025-python3-scipy_1.16.3-3_s390x.deb ... 153s Unpacking python3-scipy (1.16.3-3) ... 155s Selecting previously unselected package python3-biom-format. 155s Preparing to unpack .../026-python3-biom-format_2.1.17-1_s390x.deb ... 155s Unpacking python3-biom-format (2.1.17-1) ... 155s Selecting previously unselected package python-matplotlib-data. 155s Preparing to unpack .../027-python-matplotlib-data_3.10.7+dfsg1-1_all.deb ... 155s Unpacking python-matplotlib-data (3.10.7+dfsg1-1) ... 155s Selecting previously unselected package libgomp1:s390x. 155s Preparing to unpack .../028-libgomp1_15.2.0-11ubuntu1_s390x.deb ... 155s Unpacking libgomp1:s390x (15.2.0-11ubuntu1) ... 157s Selecting previously unselected package libimagequant0:s390x. 157s Preparing to unpack .../029-libimagequant0_2.18.0-1build1_s390x.deb ... 157s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 157s Selecting previously unselected package libjpeg-turbo8:s390x. 157s Preparing to unpack .../030-libjpeg-turbo8_2.1.5-4ubuntu2_s390x.deb ... 157s Unpacking libjpeg-turbo8:s390x (2.1.5-4ubuntu2) ... 157s Selecting previously unselected package libjpeg8:s390x. 157s Preparing to unpack .../031-libjpeg8_8c-2ubuntu11_s390x.deb ... 157s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 157s Selecting previously unselected package liblcms2-2:s390x. 157s Preparing to unpack .../032-liblcms2-2_2.17-1_s390x.deb ... 157s Unpacking liblcms2-2:s390x (2.17-1) ... 157s Selecting previously unselected package libopenjp2-7:s390x. 157s Preparing to unpack .../033-libopenjp2-7_2.5.4-1_s390x.deb ... 157s Unpacking libopenjp2-7:s390x (2.5.4-1) ... 157s Selecting previously unselected package libgraphite2-3:s390x. 157s Preparing to unpack .../034-libgraphite2-3_1.3.14-11ubuntu1_s390x.deb ... 157s Unpacking libgraphite2-3:s390x (1.3.14-11ubuntu1) ... 157s Selecting previously unselected package libharfbuzz0b:s390x. 157s Preparing to unpack .../035-libharfbuzz0b_12.3.0-4_s390x.deb ... 157s Unpacking libharfbuzz0b:s390x (12.3.0-4) ... 157s Selecting previously unselected package libraqm0:s390x. 157s Preparing to unpack .../036-libraqm0_0.10.3-1_s390x.deb ... 157s Unpacking libraqm0:s390x (0.10.3-1) ... 157s Selecting previously unselected package libdeflate0:s390x. 157s Preparing to unpack .../037-libdeflate0_1.23-2_s390x.deb ... 157s Unpacking libdeflate0:s390x (1.23-2) ... 157s Selecting previously unselected package libjbig0:s390x. 157s Preparing to unpack .../038-libjbig0_2.1-6.1ubuntu3_s390x.deb ... 157s Unpacking libjbig0:s390x (2.1-6.1ubuntu3) ... 157s Selecting previously unselected package libsharpyuv0:s390x. 157s Preparing to unpack .../039-libsharpyuv0_1.5.0-0.1build1_s390x.deb ... 157s Unpacking libsharpyuv0:s390x (1.5.0-0.1build1) ... 157s Selecting previously unselected package libwebp7:s390x. 157s Preparing to unpack .../040-libwebp7_1.5.0-0.1build1_s390x.deb ... 157s Unpacking libwebp7:s390x (1.5.0-0.1build1) ... 157s Selecting previously unselected package libtiff6:s390x. 157s Preparing to unpack .../041-libtiff6_4.7.0-3ubuntu3_s390x.deb ... 157s Unpacking libtiff6:s390x (4.7.0-3ubuntu3) ... 157s Selecting previously unselected package libwebpdemux2:s390x. 157s Preparing to unpack .../042-libwebpdemux2_1.5.0-0.1build1_s390x.deb ... 157s Unpacking libwebpdemux2:s390x (1.5.0-0.1build1) ... 157s Selecting previously unselected package libwebpmux3:s390x. 157s Preparing to unpack .../043-libwebpmux3_1.5.0-0.1build1_s390x.deb ... 157s Unpacking libwebpmux3:s390x (1.5.0-0.1build1) ... 157s Selecting previously unselected package python3-pil:s390x. 157s Preparing to unpack .../044-python3-pil_12.0.0-1ubuntu1_s390x.deb ... 157s Unpacking python3-pil:s390x (12.0.0-1ubuntu1) ... 157s Selecting previously unselected package libtcl8.6:s390x. 157s Preparing to unpack .../045-libtcl8.6_8.6.17+dfsg-1_s390x.deb ... 157s Unpacking libtcl8.6:s390x (8.6.17+dfsg-1) ... 157s Selecting previously unselected package libxrender1:s390x. 157s Preparing to unpack .../046-libxrender1_1%3a0.9.12-1_s390x.deb ... 157s Unpacking libxrender1:s390x (1:0.9.12-1) ... 157s Selecting previously unselected package libxft2:s390x. 157s Preparing to unpack .../047-libxft2_2.3.6-1build2_s390x.deb ... 157s Unpacking libxft2:s390x (2.3.6-1build2) ... 157s Selecting previously unselected package x11-common. 157s Preparing to unpack .../048-x11-common_1%3a7.7+24ubuntu1_all.deb ... 157s Unpacking x11-common (1:7.7+24ubuntu1) ... 157s Selecting previously unselected package libxss1:s390x. 157s Preparing to unpack .../049-libxss1_1%3a1.2.3-1build4_s390x.deb ... 157s Unpacking libxss1:s390x (1:1.2.3-1build4) ... 157s Selecting previously unselected package libtk8.6:s390x. 157s Preparing to unpack .../050-libtk8.6_8.6.17-1_s390x.deb ... 157s Unpacking libtk8.6:s390x (8.6.17-1) ... 157s Selecting previously unselected package python3.13-tk. 157s Preparing to unpack .../051-python3.13-tk_3.13.11-1_s390x.deb ... 157s Unpacking python3.13-tk (3.13.11-1) ... 157s Selecting previously unselected package python3.14-tk. 157s Preparing to unpack .../052-python3.14-tk_3.14.2-1_s390x.deb ... 157s Unpacking python3.14-tk (3.14.2-1) ... 157s Selecting previously unselected package python3-tk. 157s Preparing to unpack .../053-python3-tk_3.14.2-1_s390x.deb ... 157s Unpacking python3-tk (3.14.2-1) ... 157s Selecting previously unselected package python3-pil.imagetk:s390x. 157s Preparing to unpack .../054-python3-pil.imagetk_12.0.0-1ubuntu1_s390x.deb ... 157s Unpacking python3-pil.imagetk:s390x (12.0.0-1ubuntu1) ... 157s Selecting previously unselected package python3-contourpy. 157s Preparing to unpack .../055-python3-contourpy_1.3.3-1_s390x.deb ... 157s Unpacking python3-contourpy (1.3.3-1) ... 157s Selecting previously unselected package python3-cycler. 157s Preparing to unpack .../056-python3-cycler_0.12.1-2_all.deb ... 157s Unpacking python3-cycler (0.12.1-2) ... 157s Selecting previously unselected package python3-brotli. 157s Preparing to unpack .../057-python3-brotli_1.1.0-2build6_s390x.deb ... 157s Unpacking python3-brotli (1.1.0-2build6) ... 157s Selecting previously unselected package libxslt1.1:s390x. 157s Preparing to unpack .../058-libxslt1.1_1.1.43-0.3_s390x.deb ... 157s Unpacking libxslt1.1:s390x (1.1.43-0.3) ... 157s Selecting previously unselected package python3-lxml:s390x. 157s Preparing to unpack .../059-python3-lxml_6.0.2-1_s390x.deb ... 157s Unpacking python3-lxml:s390x (6.0.2-1) ... 158s Selecting previously unselected package python3-lz4. 158s Preparing to unpack .../060-python3-lz4_4.4.5+dfsg-1_s390x.deb ... 158s Unpacking python3-lz4 (4.4.5+dfsg-1) ... 158s Selecting previously unselected package python3-mpmath. 158s Preparing to unpack .../061-python3-mpmath_1.3.0-2_all.deb ... 158s Unpacking python3-mpmath (1.3.0-2) ... 158s Selecting previously unselected package python3-sympy. 158s Preparing to unpack .../062-python3-sympy_1.14.0-2_all.deb ... 158s Unpacking python3-sympy (1.14.0-2) ... 159s Selecting previously unselected package python3-ufolib2. 159s Preparing to unpack .../063-python3-ufolib2_0.18.1+dfsg1-1_all.deb ... 159s Unpacking python3-ufolib2 (0.18.1+dfsg1-1) ... 159s Selecting previously unselected package python3-unicodedata2. 159s Preparing to unpack .../064-python3-unicodedata2_16.0.0+ds-1build1_s390x.deb ... 159s Unpacking python3-unicodedata2 (16.0.0+ds-1build1) ... 159s Selecting previously unselected package libzopfli1. 159s Preparing to unpack .../065-libzopfli1_1.0.3-3_s390x.deb ... 159s Unpacking libzopfli1 (1.0.3-3) ... 160s Selecting previously unselected package python3-zopfli. 160s Preparing to unpack .../066-python3-zopfli_0.4.0-1_s390x.deb ... 160s Unpacking python3-zopfli (0.4.0-1) ... 160s Selecting previously unselected package unicode-data. 160s Preparing to unpack .../067-unicode-data_16.0.0-1build1_all.deb ... 160s Unpacking unicode-data (16.0.0-1build1) ... 160s Selecting previously unselected package python3-fonttools. 160s Preparing to unpack .../068-python3-fonttools_4.61.1-3_s390x.deb ... 160s Unpacking python3-fonttools (4.61.1-3) ... 161s Selecting previously unselected package python3-kiwisolver. 161s Preparing to unpack .../069-python3-kiwisolver_1.4.10~rc0-1_s390x.deb ... 161s Unpacking python3-kiwisolver (1.4.10~rc0-1) ... 161s Selecting previously unselected package python3-matplotlib. 161s Preparing to unpack .../070-python3-matplotlib_3.10.7+dfsg1-1_s390x.deb ... 161s Unpacking python3-matplotlib (3.10.7+dfsg1-1) ... 163s Selecting previously unselected package python3-tzlocal. 163s Preparing to unpack .../071-python3-tzlocal_5.3.1-2_all.deb ... 163s Unpacking python3-tzlocal (5.3.1-2) ... 163s Selecting previously unselected package zip. 163s Preparing to unpack .../072-zip_3.0-15ubuntu2_s390x.deb ... 163s Unpacking zip (3.0-15ubuntu2) ... 163s Selecting previously unselected package unzip. 163s Preparing to unpack .../073-unzip_6.0-29ubuntu1_s390x.deb ... 163s Unpacking unzip (6.0-29ubuntu1) ... 163s Selecting previously unselected package libpaper2:s390x. 163s Preparing to unpack .../074-libpaper2_2.2.5-0.3build1_s390x.deb ... 163s Unpacking libpaper2:s390x (2.2.5-0.3build1) ... 163s Selecting previously unselected package libpaper-utils. 163s Preparing to unpack .../075-libpaper-utils_2.2.5-0.3build1_s390x.deb ... 163s Unpacking libpaper-utils (2.2.5-0.3build1) ... 163s Selecting previously unselected package xdg-utils. 163s Preparing to unpack .../076-xdg-utils_1.2.1-2ubuntu2_all.deb ... 163s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 163s Selecting previously unselected package libpixman-1-0:s390x. 163s Preparing to unpack .../077-libpixman-1-0_0.46.4-1_s390x.deb ... 163s Unpacking libpixman-1-0:s390x (0.46.4-1) ... 163s Selecting previously unselected package libxcb-render0:s390x. 163s Preparing to unpack .../078-libxcb-render0_1.17.0-2build1_s390x.deb ... 163s Unpacking libxcb-render0:s390x (1.17.0-2build1) ... 163s Selecting previously unselected package libxcb-shm0:s390x. 163s Preparing to unpack .../079-libxcb-shm0_1.17.0-2build1_s390x.deb ... 163s Unpacking libxcb-shm0:s390x (1.17.0-2build1) ... 163s Selecting previously unselected package libcairo2:s390x. 163s Preparing to unpack .../080-libcairo2_1.18.4-3_s390x.deb ... 163s Unpacking libcairo2:s390x (1.18.4-3) ... 163s Selecting previously unselected package libthai-data. 163s Preparing to unpack .../081-libthai-data_0.1.30-1_all.deb ... 163s Unpacking libthai-data (0.1.30-1) ... 163s Selecting previously unselected package libdatrie1:s390x. 163s Preparing to unpack .../082-libdatrie1_0.2.14-1_s390x.deb ... 163s Unpacking libdatrie1:s390x (0.2.14-1) ... 163s Selecting previously unselected package libthai0:s390x. 163s Preparing to unpack .../083-libthai0_0.1.30-1_s390x.deb ... 163s Unpacking libthai0:s390x (0.1.30-1) ... 163s Selecting previously unselected package libpango-1.0-0:s390x. 163s Preparing to unpack .../084-libpango-1.0-0_1.56.4-1_s390x.deb ... 163s Unpacking libpango-1.0-0:s390x (1.56.4-1) ... 163s Selecting previously unselected package libpangoft2-1.0-0:s390x. 163s Preparing to unpack .../085-libpangoft2-1.0-0_1.56.4-1_s390x.deb ... 163s Unpacking libpangoft2-1.0-0:s390x (1.56.4-1) ... 163s Selecting previously unselected package libpangocairo-1.0-0:s390x. 163s Preparing to unpack .../086-libpangocairo-1.0-0_1.56.4-1_s390x.deb ... 163s Unpacking libpangocairo-1.0-0:s390x (1.56.4-1) ... 163s Selecting previously unselected package libice6:s390x. 163s Preparing to unpack .../087-libice6_2%3a1.1.1-1build1_s390x.deb ... 163s Unpacking libice6:s390x (2:1.1.1-1build1) ... 163s Selecting previously unselected package libsm6:s390x. 163s Preparing to unpack .../088-libsm6_2%3a1.2.6-1_s390x.deb ... 163s Unpacking libsm6:s390x (2:1.2.6-1) ... 163s Selecting previously unselected package libxt6t64:s390x. 163s Preparing to unpack .../089-libxt6t64_1%3a1.2.1-1.3_s390x.deb ... 163s Unpacking libxt6t64:s390x (1:1.2.1-1.3) ... 163s Selecting previously unselected package r-base-core. 163s Preparing to unpack .../090-r-base-core_4.5.2-1ubuntu2_s390x.deb ... 163s Unpacking r-base-core (4.5.2-1ubuntu2) ... 165s Selecting previously unselected package python3-rpy2. 165s Preparing to unpack .../091-python3-rpy2_3.6.4-2_s390x.deb ... 165s Unpacking python3-rpy2 (3.6.4-2) ... 165s Selecting previously unselected package r-cran-lattice. 165s Preparing to unpack .../092-r-cran-lattice_0.22-7-1_s390x.deb ... 165s Unpacking r-cran-lattice (0.22-7-1) ... 165s Selecting previously unselected package r-cran-matrix. 165s Preparing to unpack .../093-r-cran-matrix_1.7-4-1_s390x.deb ... 165s Unpacking r-cran-matrix (1.7-4-1) ... 165s Selecting previously unselected package r-cran-survival. 165s Preparing to unpack .../094-r-cran-survival_3.8-3-1_s390x.deb ... 165s Unpacking r-cran-survival (3.8-3-1) ... 165s Selecting previously unselected package r-cran-mvtnorm. 165s Preparing to unpack .../095-r-cran-mvtnorm_1.3-3-1_s390x.deb ... 165s Unpacking r-cran-mvtnorm (1.3-3-1) ... 165s Selecting previously unselected package r-cran-libcoin. 165s Preparing to unpack .../096-r-cran-libcoin_1.0-10-1_s390x.deb ... 165s Unpacking r-cran-libcoin (1.0-10-1) ... 165s Selecting previously unselected package r-cran-matrixstats. 165s Preparing to unpack .../097-r-cran-matrixstats_1.5.0-1_s390x.deb ... 165s Unpacking r-cran-matrixstats (1.5.0-1) ... 165s Selecting previously unselected package r-cran-modeltools. 165s Preparing to unpack .../098-r-cran-modeltools_0.2-24-1_all.deb ... 165s Unpacking r-cran-modeltools (0.2-24-1) ... 165s Selecting previously unselected package r-cran-mass. 165s Preparing to unpack .../099-r-cran-mass_7.3-65-1_s390x.deb ... 165s Unpacking r-cran-mass (7.3-65-1) ... 165s Selecting previously unselected package r-cran-th.data. 165s Preparing to unpack .../100-r-cran-th.data_1.1-5-1_all.deb ... 165s Unpacking r-cran-th.data (1.1-5-1) ... 165s Selecting previously unselected package r-cran-zoo. 165s Preparing to unpack .../101-r-cran-zoo_1.8-15-1_s390x.deb ... 165s Unpacking r-cran-zoo (1.8-15-1) ... 166s Selecting previously unselected package r-cran-sandwich. 166s Preparing to unpack .../102-r-cran-sandwich_3.1-1-1_all.deb ... 166s Unpacking r-cran-sandwich (3.1-1-1) ... 166s Selecting previously unselected package r-cran-codetools. 166s Preparing to unpack .../103-r-cran-codetools_0.2-20-1build1_all.deb ... 166s Unpacking r-cran-codetools (0.2-20-1build1) ... 166s Selecting previously unselected package r-cran-multcomp. 166s Preparing to unpack .../104-r-cran-multcomp_1.4-29-1_all.deb ... 166s Unpacking r-cran-multcomp (1.4-29-1) ... 166s Selecting previously unselected package r-cran-coin. 166s Preparing to unpack .../105-r-cran-coin_1.4-3-1_s390x.deb ... 166s Unpacking r-cran-coin (1.4-3-1) ... 166s Selecting previously unselected package lefse. 166s Preparing to unpack .../106-lefse_1.1.2-2build1_all.deb ... 166s Unpacking lefse (1.1.2-2build1) ... 166s Setting up libgraphite2-3:s390x (1.3.14-11ubuntu1) ... 166s Setting up liblcms2-2:s390x (2.17-1) ... 166s Setting up libpixman-1-0:s390x (0.46.4-1) ... 166s Setting up libsharpyuv0:s390x (1.5.0-0.1build1) ... 166s Setting up libxrender1:s390x (1:0.9.12-1) ... 166s Setting up libdatrie1:s390x (0.2.14-1) ... 166s Setting up python3-lz4 (4.4.5+dfsg-1) ... 167s Setting up libxcb-render0:s390x (1.17.0-2build1) ... 167s Setting up python3-unicodedata2 (16.0.0+ds-1build1) ... 167s Setting up fonts-lyx (2.5.0~RC2-3) ... 167s Setting up unzip (6.0-29ubuntu1) ... 167s Setting up x11-common (1:7.7+24ubuntu1) ... 167s Setting up libdeflate0:s390x (1.23-2) ... 167s Setting up libqhull-r8.0:s390x (2020.2-8) ... 167s Setting up python3-pytz (2025.2-5) ... 167s Setting up libxcb-shm0:s390x (1.17.0-2build1) ... 167s Setting up libgomp1:s390x (15.2.0-11ubuntu1) ... 167s Setting up python3-click (8.2.0+0.really.8.1.8-1build1) ... 168s Setting up libjbig0:s390x (2.1-6.1ubuntu3) ... 168s Setting up libaec0:s390x (1.1.4-2) ... 168s Setting up unicode-data (16.0.0-1build1) ... 168s Setting up python3-decorator (5.2.1-2) ... 168s Setting up zip (3.0-15ubuntu2) ... 169s Setting up libblas3:s390x (3.12.1-7ubuntu1) ... 169s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 169s Setting up libzopfli1 (1.0.3-3) ... 169s Setting up libfreetype6:s390x (2.14.1+dfsg-2) ... 169s Setting up python3-brotli (1.1.0-2build6) ... 169s Setting up liblzf1:s390x (3.6-4build1) ... 169s Setting up python3-cycler (0.12.1-2) ... 169s Setting up libimagequant0:s390x (2.18.0-1build1) ... 169s Setting up fonts-dejavu-mono (2.37-8build1) ... 169s Setting up python3-kiwisolver (1.4.10~rc0-1) ... 170s Setting up python3-numpy-dev:s390x (1:2.3.5+ds-3) ... 170s Setting up libtcl8.6:s390x (8.6.17+dfsg-1) ... 170s Setting up fonts-dejavu-core (2.37-8build1) ... 170s Setting up libjpeg-turbo8:s390x (2.1.5-4ubuntu2) ... 170s Setting up libgfortran5:s390x (15.2.0-11ubuntu1) ... 170s Setting up libwebp7:s390x (1.5.0-0.1build1) ... 170s Setting up libxslt1.1:s390x (1.1.43-0.3) ... 170s Setting up libopenjp2-7:s390x (2.5.4-1) ... 170s Setting up libharfbuzz0b:s390x (12.3.0-4) ... 170s Setting up libthai-data (0.1.30-1) ... 170s Setting up libxss1:s390x (1:1.2.3-1build4) ... 170s Setting up libpaper2:s390x (2.2.5-0.3build1) ... 170s Setting up python3-mpmath (1.3.0-2) ... 172s Setting up python3-tzlocal (5.3.1-2) ... 173s Setting up python-matplotlib-data (3.10.7+dfsg1-1) ... 173s Setting up libwebpmux3:s390x (1.5.0-0.1build1) ... 173s Setting up xdg-utils (1.2.1-2ubuntu2) ... 173s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 173s Setting up libsz2:s390x (1.1.4-2) ... 173s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 173s Setting up python3-sympy (1.14.0-2) ... 196s /usr/lib/python3/dist-packages/sympy/testing/runtests.py:283: SyntaxWarning: 'return' in a 'finally' block 196s return p.returncode 197s Setting up libice6:s390x (2:1.1.1-1build1) ... 197s Setting up liblapack3:s390x (3.12.1-7ubuntu1) ... 197s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 197s Setting up fontconfig-config (2.15.0-2.4ubuntu1) ... 197s Setting up libwebpdemux2:s390x (1.5.0-0.1build1) ... 197s Setting up libpaper-utils (2.2.5-0.3build1) ... 197s Setting up python3-zopfli (0.4.0-1) ... 198s Setting up libthai0:s390x (0.1.30-1) ... 198s Setting up libraqm0:s390x (0.10.3-1) ... 198s Setting up python3-numpy (1:2.3.5+ds-3) ... 205s Setting up libhdf5-310:s390x (1.14.5+repack-4) ... 205s Setting up python3-lxml:s390x (6.0.2-1) ... 206s Setting up libtiff6:s390x (4.7.0-3ubuntu3) ... 206s Setting up python3-contourpy (1.3.3-1) ... 207s Setting up libfontconfig1:s390x (2.15.0-2.4ubuntu1) ... 207s Setting up libsm6:s390x (2:1.2.6-1) ... 207s Setting up libhdf5-hl-310:s390x (1.14.5+repack-4) ... 207s Setting up fontconfig (2.15.0-2.4ubuntu1) ... 209s Regenerating fonts cache... done. 209s Setting up libxft2:s390x (2.3.6-1build2) ... 209s Setting up python3-scipy (1.16.3-3) ... 226s Setting up libtk8.6:s390x (8.6.17-1) ... 226s Setting up python3-pandas-lib:s390x (2.3.3+dfsg-3) ... 226s Setting up libpango-1.0-0:s390x (1.56.4-1) ... 226s Setting up python3-h5py-serial (3.15.1-4) ... 227s Setting up libcairo2:s390x (1.18.4-3) ... 227s Setting up python3.13-tk (3.13.11-1) ... 228s Setting up python3-pil:s390x (12.0.0-1ubuntu1) ... 228s Setting up python3-pandas (2.3.3+dfsg-3) ... 246s Setting up libxt6t64:s390x (1:1.2.1-1.3) ... 246s Setting up python3-h5py (3.15.1-4) ... 246s Setting up libpangoft2-1.0-0:s390x (1.56.4-1) ... 246s Setting up libpangocairo-1.0-0:s390x (1.56.4-1) ... 246s Setting up python3.14-tk (3.14.2-1) ... 246s Setting up python3-tk (3.14.2-1) ... 246s Setting up python3-biom-format (2.1.17-1) ... 247s /usr/lib/python3/dist-packages/doc/sphinxext/numpydoc/numpydoc/docscrape.py:274: SyntaxWarning: "\w" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\w"? A raw string is also an option. 247s if re.compile('^([\w., ]+=)?\s*[\w\.]+\(.*\)$').match(summary_str): 247s /usr/lib/python3/dist-packages/doc/sphinxext/numpydoc/numpydoc/docscrape.py:316: SyntaxWarning: "\*" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\*"? A raw string is also an option. 247s return [self['Signature'].replace('*','\*')] + [''] 247s /usr/lib/python3/dist-packages/doc/sphinxext/numpydoc/numpydoc/docscrape.py:438: SyntaxWarning: "\*" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\*"? A raw string is also an option. 247s argspec = argspec.replace('*','\*') 247s /usr/lib/python3/dist-packages/doc/sphinxext/numpydoc/numpydoc/docscrape.py:456: SyntaxWarning: "\*" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\*"? A raw string is also an option. 247s signature = self['Signature'].replace('*', '\*') 247s Setting up python3-pil.imagetk:s390x (12.0.0-1ubuntu1) ... 247s Setting up r-base-core (4.5.2-1ubuntu2) ... 248s Creating config file /etc/R/Renviron with new version 248s Setting up r-cran-lattice (0.22-7-1) ... 248s Setting up r-cran-modeltools (0.2-24-1) ... 248s Setting up python3-rpy2 (3.6.4-2) ... 250s Setting up r-cran-codetools (0.2-20-1build1) ... 250s Setting up r-cran-matrixstats (1.5.0-1) ... 250s Setting up r-cran-mass (7.3-65-1) ... 250s Setting up r-cran-mvtnorm (1.3-3-1) ... 250s Setting up r-cran-zoo (1.8-15-1) ... 250s Setting up r-cran-matrix (1.7-4-1) ... 250s Setting up r-cran-libcoin (1.0-10-1) ... 250s Setting up r-cran-sandwich (3.1-1-1) ... 250s Setting up r-cran-survival (3.8-3-1) ... 250s Setting up r-cran-th.data (1.1-5-1) ... 250s Setting up r-cran-multcomp (1.4-29-1) ... 250s Setting up r-cran-coin (1.4-3-1) ... 250s Setting up python3-fonttools (4.61.1-3) ... 254s Setting up python3-ufolib2 (0.18.1+dfsg1-1) ... 254s Setting up python3-matplotlib (3.10.7+dfsg1-1) ... 262s Setting up lefse (1.1.2-2build1) ... 262s Processing triggers for libc-bin (2.42-2ubuntu4) ... 262s Processing triggers for man-db (2.13.1-1) ... 264s Processing triggers for install-info (7.2-5) ... 265s autopkgtest [08:47:21]: test run-unit-test: [----------------------- 273s lefse_run.py comparative pass 273s lefse2circlader.py comparative pass 276s lefse_plot_cladogram.py comparative fail. Instead, I get: 277s /usr/lib/python3/dist-packages/pyparsing/core.py:5637: SyntaxWarning: 'return' in a 'finally' block 277s return f"{type(self).__name__}: {retString}" 280s usage: lefse_plot_cladogram.py [-h] [--clade_sep CLADE_SEP] 280s [--max_lev MAX_LEV] 280s [--max_point_size MAX_POINT_SIZE] 280s [--min_point_size MIN_POINT_SIZE] 280s [--point_edge_width MARKEREDGEWIDTH] 280s [--siblings_connector_width SIBLINGS_CONNECTOR_WIDTH] 280s [--parents_connector_width PARENTS_CONNECTOR_WIDTH] 280s [--radial_start_lev RADIAL_START_LEV] 280s [--labeled_start_lev LABELED_START_LEV] 280s [--labeled_stop_lev LABELED_STOP_LEV] 280s [--abrv_start_lev ABRV_START_LEV] 280s [--abrv_stop_lev ABRV_STOP_LEV] 280s [--expand_void_lev EXPAND_VOID_LEV] 280s [--class_legend_vis CLASS_LEGEND_VIS] 280s [--colored_connector COLORED_CONNECTORS] 280s [--alpha ALPHA] [--title TITLE] 280s [--sub_clade SUB_CLADE] 280s [--title_font_size TITLE_FONT_SIZE] 280s [--right_space_prop R_PROP] 280s [--left_space_prop L_PROP] 280s [--label_font_size LABEL_FONT_SIZE] 280s [--background_color {k,w}] 280s [--colored_labels {0,1}] 280s [--class_legend_font_size CLASS_LEGEND_FONT_SIZE] 280s [--dpi DPI] [--format {png,svg,pdf}] 280s [--all_feats ALL_FEATS] 280s INPUT_FILE OUTPUT_FILE 280s 280s Cladoplot 280s 280s positional arguments: 280s INPUT_FILE tab delimited input file 280s OUTPUT_FILE the file for the output image 280s 280s options: 280s -h, --help show this help message and exit 280s --clade_sep CLADE_SEP 280s --max_lev MAX_LEV 280s --max_point_size MAX_POINT_SIZE 280s --min_point_size MIN_POINT_SIZE 280s --point_edge_width MARKEREDGEWIDTH 280s --siblings_connector_width SIBLINGS_CONNECTOR_WIDTH 280s --parents_connector_width PARENTS_CONNECTOR_WIDTH 280s --radial_start_lev RADIAL_START_LEV 280s --labeled_start_lev LABELED_START_LEV 280s --labeled_stop_lev LABELED_STOP_LEV 280s --abrv_start_lev ABRV_START_LEV 280s --abrv_stop_lev ABRV_STOP_LEV 280s --expand_void_lev EXPAND_VOID_LEV 280s --class_legend_vis CLASS_LEGEND_VIS 280s --colored_connector COLORED_CONNECTORS 280s --alpha ALPHA 280s --title TITLE 280s --sub_clade SUB_CLADE 280s --title_font_size TITLE_FONT_SIZE 280s --right_space_prop R_PROP 280s --left_space_prop L_PROP 280s --label_font_size LABEL_FONT_SIZE 280s --background_color {k,w} 280s set the color of the background 280s --colored_labels {0,1} 280s draw the label with class color (1) or in black (0) 280s --class_legend_font_size CLASS_LEGEND_FONT_SIZE 280s --dpi DPI 280s --format {png,svg,pdf} 280s the format for the output file 280s --all_feats ALL_FEATS 281s autopkgtest [08:47:37]: test run-unit-test: -----------------------] 281s autopkgtest [08:47:37]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 281s run-unit-test FAIL non-zero exit status 1 281s autopkgtest [08:47:37]: @@@@@@@@@@@@@@@@@@@@ summary 281s run-unit-test FAIL non-zero exit status 1