0s autopkgtest [21:01:54]: starting date and time: 2025-10-25 21:01:54+0000 0s autopkgtest [21:01:54]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [21:01:54]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hrpec0zw/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:rust-coreutils --apt-upgrade lambda-align --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=rust-coreutils/0.3.0-0ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-8.secgroup --name adt-resolute-s390x-lambda-align-20251025-210154-juju-7f2275-prod-proposed-migration-environment-20-3a8da154-56b5-40e8-ba5f-361439833d7c --image adt/ubuntu-resolute-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-s390x-lambda-align-20251025-210154-juju-7f2275-prod-proposed-migration-environment-20-3a8da154-56b5-40e8-ba5f-361439833d7c from image adt/ubuntu-resolute-s390x-server-20251025.img (UUID 1456e811-6761-44a6-8067-f563d7b13b89)... 46s autopkgtest [21:02:40]: testbed dpkg architecture: s390x 46s autopkgtest [21:02:40]: testbed apt version: 3.1.8ubuntu1 47s autopkgtest [21:02:41]: @@@@@@@@@@@@@@@@@@@@ test bed setup 47s autopkgtest [21:02:41]: testbed release detected to be: None 48s autopkgtest [21:02:42]: updating testbed package index (apt update) 48s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 48s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 48s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 48s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 48s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [16.5 kB] 48s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [60.2 kB] 48s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 48s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [455 kB] 49s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x Packages [149 kB] 49s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted s390x Packages [940 B] 49s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe s390x Packages [320 kB] 49s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse s390x Packages [4204 B] 49s Fetched 1098 kB in 1s (864 kB/s) 50s Reading package lists... 50s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 50s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 50s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 50s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 51s Reading package lists... 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s Calculating upgrade... 51s The following packages will be upgraded: 51s bind9-dnsutils bind9-host bind9-libs libdrm-common libdrm2 python3-jwt 51s python3-openssl rust-coreutils 51s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 51s Need to get 5141 kB of archives. 51s After this operation, 1069 kB of additional disk space will be used. 51s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main s390x rust-coreutils s390x 0.3.0-0ubuntu2 [3518 kB] 53s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x bind9-dnsutils s390x 1:9.20.11-1ubuntu3 [171 kB] 53s Get:3 http://ftpmaster.internal/ubuntu resolute/main s390x bind9-host s390x 1:9.20.11-1ubuntu3 [48.5 kB] 53s Get:4 http://ftpmaster.internal/ubuntu resolute/main s390x bind9-libs s390x 1:9.20.11-1ubuntu3 [1282 kB] 53s Get:5 http://ftpmaster.internal/ubuntu resolute/main s390x libdrm-common all 2.4.127-1ubuntu1 [9716 B] 53s Get:6 http://ftpmaster.internal/ubuntu resolute/main s390x libdrm2 s390x 2.4.127-1ubuntu1 [44.6 kB] 53s Get:7 http://ftpmaster.internal/ubuntu resolute/main s390x python3-jwt all 2.10.1-3 [21.1 kB] 53s Get:8 http://ftpmaster.internal/ubuntu resolute/main s390x python3-openssl all 25.1.0-1 [46.4 kB] 54s dpkg-preconfigure: unable to re-open stdin: No such file or directory 54s Fetched 5141 kB in 2s (2471 kB/s) 54s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56873 files and directories currently installed.) 54s Preparing to unpack .../rust-coreutils_0.3.0-0ubuntu2_s390x.deb ... 54s Unpacking rust-coreutils (0.3.0-0ubuntu2) over (0.2.2-0ubuntu2) ... 54s Setting up rust-coreutils (0.3.0-0ubuntu2) ... 54s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56933 files and directories currently installed.) 54s Preparing to unpack .../0-bind9-dnsutils_1%3a9.20.11-1ubuntu3_s390x.deb ... 54s Unpacking bind9-dnsutils (1:9.20.11-1ubuntu3) over (1:9.20.11-1ubuntu2) ... 54s Preparing to unpack .../1-bind9-host_1%3a9.20.11-1ubuntu3_s390x.deb ... 54s Unpacking bind9-host (1:9.20.11-1ubuntu3) over (1:9.20.11-1ubuntu2) ... 54s Preparing to unpack .../2-bind9-libs_1%3a9.20.11-1ubuntu3_s390x.deb ... 54s Unpacking bind9-libs:s390x (1:9.20.11-1ubuntu3) over (1:9.20.11-1ubuntu2) ... 54s Preparing to unpack .../3-libdrm-common_2.4.127-1ubuntu1_all.deb ... 54s Unpacking libdrm-common (2.4.127-1ubuntu1) over (2.4.125-1) ... 54s Preparing to unpack .../4-libdrm2_2.4.127-1ubuntu1_s390x.deb ... 54s Unpacking libdrm2:s390x (2.4.127-1ubuntu1) over (2.4.125-1) ... 54s Preparing to unpack .../5-python3-jwt_2.10.1-3_all.deb ... 54s Unpacking python3-jwt (2.10.1-3) over (2.10.1-2) ... 54s Preparing to unpack .../6-python3-openssl_25.1.0-1_all.deb ... 54s Unpacking python3-openssl (25.1.0-1) over (25.0.0-1) ... 54s Setting up bind9-libs:s390x (1:9.20.11-1ubuntu3) ... 54s Setting up python3-jwt (2.10.1-3) ... 54s Setting up python3-openssl (25.1.0-1) ... 54s Setting up bind9-host (1:9.20.11-1ubuntu3) ... 54s Setting up libdrm-common (2.4.127-1ubuntu1) ... 54s Setting up libdrm2:s390x (2.4.127-1ubuntu1) ... 54s Setting up bind9-dnsutils (1:9.20.11-1ubuntu3) ... 54s Processing triggers for man-db (2.13.1-1) ... 55s Processing triggers for libc-bin (2.42-0ubuntu3) ... 55s autopkgtest [21:02:49]: upgrading testbed (apt dist-upgrade and autopurge) 55s Reading package lists... 55s Building dependency tree... 55s Reading state information... 55s Calculating upgrade... 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 55s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Solving dependencies... 56s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s autopkgtest [21:02:52]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP Mon Sep 22 08:56:47 UTC 2025 59s autopkgtest [21:02:53]: @@@@@@@@@@@@@@@@@@@@ apt-source lambda-align 60s Get:1 http://ftpmaster.internal/ubuntu resolute/universe lambda-align 1.0.3-6 (dsc) [1797 B] 60s Get:2 http://ftpmaster.internal/ubuntu resolute/universe lambda-align 1.0.3-6 (tar) [323 kB] 60s Get:3 http://ftpmaster.internal/ubuntu resolute/universe lambda-align 1.0.3-6 (diff) [8076 B] 60s gpgv: Signature made Sat Feb 8 15:33:49 2020 UTC 60s gpgv: using RSA key 8451F9178172E7E2DC73F79551F84A8FECCA7E09 60s gpgv: Can't check signature: No public key 60s dpkg-source: warning: cannot verify inline signature for ./lambda-align_1.0.3-6.dsc: no acceptable signature found 60s autopkgtest [21:02:54]: testing package lambda-align version 1.0.3-6 61s autopkgtest [21:02:55]: build not needed 61s autopkgtest [21:02:55]: test run-tests: preparing testbed 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 62s Solving dependencies... 62s The following NEW packages will be installed: 62s autoconf automake autopoint autotools-dev build-essential cmake cmake-data 62s cpp cpp-15 cpp-15-s390x-linux-gnu cpp-s390x-linux-gnu debhelper debugedit 62s dh-autoreconf dh-strip-nondeterminism dwz g++ g++-15 g++-15-s390x-linux-gnu 62s g++-s390x-linux-gnu gcc gcc-15 gcc-15-s390x-linux-gnu gcc-s390x-linux-gnu 62s gettext intltool-debian lambda-align libarchive-zip-perl libasan8 libbz2-dev 62s libcc1-0 libdebhelper-perl libfile-stripnondeterminism-perl libgcc-15-dev 62s libgomp1 libisl23 libitm1 libjsoncpp26 libmpc3 librhash1 libseqan2-dev 62s libstdc++-15-dev libtool libubsan1 m4 po-debconf zlib1g-dev 62s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. 62s Need to get 74.8 MB of archives. 62s After this operation, 251 MB of additional disk space will be used. 62s Get:1 http://ftpmaster.internal/ubuntu resolute/main s390x m4 s390x 1.4.19-8 [259 kB] 62s Get:2 http://ftpmaster.internal/ubuntu resolute/main s390x autoconf all 2.72-3.1ubuntu1 [384 kB] 63s Get:3 http://ftpmaster.internal/ubuntu resolute/main s390x autotools-dev all 20240727.1 [43.4 kB] 63s Get:4 http://ftpmaster.internal/ubuntu resolute/main s390x automake all 1:1.17-4ubuntu1 [572 kB] 63s Get:5 http://ftpmaster.internal/ubuntu resolute/main s390x autopoint all 0.23.1-2build2 [619 kB] 63s Get:6 http://ftpmaster.internal/ubuntu resolute/main s390x libisl23 s390x 0.27-1 [704 kB] 63s Get:7 http://ftpmaster.internal/ubuntu resolute/main s390x libmpc3 s390x 1.3.1-1build3 [57.6 kB] 63s Get:8 http://ftpmaster.internal/ubuntu resolute/main s390x cpp-15-s390x-linux-gnu s390x 15.2.0-5ubuntu1 [10.2 MB] 65s Get:9 http://ftpmaster.internal/ubuntu resolute/main s390x cpp-15 s390x 15.2.0-5ubuntu1 [1024 B] 65s Get:10 http://ftpmaster.internal/ubuntu resolute/main s390x cpp-s390x-linux-gnu s390x 4:15.2.0-4ubuntu1 [5746 B] 65s Get:11 http://ftpmaster.internal/ubuntu resolute/main s390x cpp s390x 4:15.2.0-4ubuntu1 [22.4 kB] 65s Get:12 http://ftpmaster.internal/ubuntu resolute/main s390x libcc1-0 s390x 15.2.0-5ubuntu1 [50.0 kB] 65s Get:13 http://ftpmaster.internal/ubuntu resolute/main s390x libgomp1 s390x 15.2.0-5ubuntu1 [154 kB] 65s Get:14 http://ftpmaster.internal/ubuntu resolute/main s390x libitm1 s390x 15.2.0-5ubuntu1 [30.9 kB] 65s Get:15 http://ftpmaster.internal/ubuntu resolute/main s390x libasan8 s390x 15.2.0-5ubuntu1 [2969 kB] 65s Get:16 http://ftpmaster.internal/ubuntu resolute/main s390x libubsan1 s390x 15.2.0-5ubuntu1 [1211 kB] 65s Get:17 http://ftpmaster.internal/ubuntu resolute/main s390x libgcc-15-dev s390x 15.2.0-5ubuntu1 [1045 kB] 65s Get:18 http://ftpmaster.internal/ubuntu resolute/main s390x gcc-15-s390x-linux-gnu s390x 15.2.0-5ubuntu1 [19.9 MB] 66s Get:19 http://ftpmaster.internal/ubuntu resolute/main s390x gcc-15 s390x 15.2.0-5ubuntu1 [512 kB] 66s Get:20 http://ftpmaster.internal/ubuntu resolute/main s390x gcc-s390x-linux-gnu s390x 4:15.2.0-4ubuntu1 [1208 B] 66s Get:21 http://ftpmaster.internal/ubuntu resolute/main s390x gcc s390x 4:15.2.0-4ubuntu1 [5018 B] 66s Get:22 http://ftpmaster.internal/ubuntu resolute/main s390x libstdc++-15-dev s390x 15.2.0-5ubuntu1 [2658 kB] 66s Get:23 http://ftpmaster.internal/ubuntu resolute/main s390x g++-15-s390x-linux-gnu s390x 15.2.0-5ubuntu1 [11.7 MB] 67s Get:24 http://ftpmaster.internal/ubuntu resolute/main s390x g++-15 s390x 15.2.0-5ubuntu1 [23.7 kB] 67s Get:25 http://ftpmaster.internal/ubuntu resolute/main s390x g++-s390x-linux-gnu s390x 4:15.2.0-4ubuntu1 [956 B] 67s Get:26 http://ftpmaster.internal/ubuntu resolute/main s390x g++ s390x 4:15.2.0-4ubuntu1 [1078 B] 67s Get:27 http://ftpmaster.internal/ubuntu resolute/main s390x build-essential s390x 12.12ubuntu1 [5090 B] 67s Get:28 http://ftpmaster.internal/ubuntu resolute/main s390x cmake-data all 3.31.6-2ubuntu6 [2295 kB] 67s Get:29 http://ftpmaster.internal/ubuntu resolute/main s390x libjsoncpp26 s390x 1.9.6-3 [80.8 kB] 67s Get:30 http://ftpmaster.internal/ubuntu resolute/main s390x librhash1 s390x 1.4.6-1 [137 kB] 67s Get:31 http://ftpmaster.internal/ubuntu resolute/main s390x cmake s390x 3.31.6-2ubuntu6 [13.2 MB] 67s Get:32 http://ftpmaster.internal/ubuntu resolute/main s390x libdebhelper-perl all 13.24.2ubuntu1 [95.7 kB] 67s Get:33 http://ftpmaster.internal/ubuntu resolute/main s390x libtool all 2.5.4-4build1 [169 kB] 67s Get:34 http://ftpmaster.internal/ubuntu resolute/main s390x dh-autoreconf all 21 [12.5 kB] 67s Get:35 http://ftpmaster.internal/ubuntu resolute/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] 67s Get:36 http://ftpmaster.internal/ubuntu resolute/main s390x libfile-stripnondeterminism-perl all 1.14.2-1 [20.4 kB] 67s Get:37 http://ftpmaster.internal/ubuntu resolute/main s390x dh-strip-nondeterminism all 1.14.2-1 [5098 B] 67s Get:38 http://ftpmaster.internal/ubuntu resolute/main s390x debugedit s390x 1:5.2-3 [52.8 kB] 67s Get:39 http://ftpmaster.internal/ubuntu resolute/main s390x dwz s390x 0.16-2 [121 kB] 67s Get:40 http://ftpmaster.internal/ubuntu resolute/main s390x gettext s390x 0.23.1-2build2 [1062 kB] 67s Get:41 http://ftpmaster.internal/ubuntu resolute/main s390x intltool-debian all 0.35.0+20060710.6 [23.2 kB] 67s Get:42 http://ftpmaster.internal/ubuntu resolute/main s390x po-debconf all 1.0.21+nmu1 [233 kB] 67s Get:43 http://ftpmaster.internal/ubuntu resolute/main s390x debhelper all 13.24.2ubuntu1 [896 kB] 67s Get:44 http://ftpmaster.internal/ubuntu resolute/universe s390x lambda-align s390x 1.0.3-6 [1064 kB] 67s Get:45 http://ftpmaster.internal/ubuntu resolute/main s390x libbz2-dev s390x 1.0.8-6build1 [40.7 kB] 67s Get:46 http://ftpmaster.internal/ubuntu resolute/universe s390x libseqan2-dev all 2.4.0+dfsg-16 [1206 kB] 68s Get:47 http://ftpmaster.internal/ubuntu resolute/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu2 [897 kB] 68s Fetched 74.8 MB in 6s (13.1 MB/s) 68s Selecting previously unselected package m4. 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56933 files and directories currently installed.) 68s Preparing to unpack .../00-m4_1.4.19-8_s390x.deb ... 68s Unpacking m4 (1.4.19-8) ... 68s Selecting previously unselected package autoconf. 68s Preparing to unpack .../01-autoconf_2.72-3.1ubuntu1_all.deb ... 68s Unpacking autoconf (2.72-3.1ubuntu1) ... 68s Selecting previously unselected package autotools-dev. 68s Preparing to unpack .../02-autotools-dev_20240727.1_all.deb ... 68s Unpacking autotools-dev (20240727.1) ... 68s Selecting previously unselected package automake. 68s Preparing to unpack .../03-automake_1%3a1.17-4ubuntu1_all.deb ... 68s Unpacking automake (1:1.17-4ubuntu1) ... 68s Selecting previously unselected package autopoint. 68s Preparing to unpack .../04-autopoint_0.23.1-2build2_all.deb ... 68s Unpacking autopoint (0.23.1-2build2) ... 68s Selecting previously unselected package libisl23:s390x. 68s Preparing to unpack .../05-libisl23_0.27-1_s390x.deb ... 68s Unpacking libisl23:s390x (0.27-1) ... 68s Selecting previously unselected package libmpc3:s390x. 68s Preparing to unpack .../06-libmpc3_1.3.1-1build3_s390x.deb ... 68s Unpacking libmpc3:s390x (1.3.1-1build3) ... 68s Selecting previously unselected package cpp-15-s390x-linux-gnu. 68s Preparing to unpack .../07-cpp-15-s390x-linux-gnu_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking cpp-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package cpp-15. 68s Preparing to unpack .../08-cpp-15_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking cpp-15 (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package cpp-s390x-linux-gnu. 68s Preparing to unpack .../09-cpp-s390x-linux-gnu_4%3a15.2.0-4ubuntu1_s390x.deb ... 68s Unpacking cpp-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 68s Selecting previously unselected package cpp. 68s Preparing to unpack .../10-cpp_4%3a15.2.0-4ubuntu1_s390x.deb ... 68s Unpacking cpp (4:15.2.0-4ubuntu1) ... 68s Selecting previously unselected package libcc1-0:s390x. 68s Preparing to unpack .../11-libcc1-0_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking libcc1-0:s390x (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package libgomp1:s390x. 68s Preparing to unpack .../12-libgomp1_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking libgomp1:s390x (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package libitm1:s390x. 68s Preparing to unpack .../13-libitm1_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking libitm1:s390x (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package libasan8:s390x. 68s Preparing to unpack .../14-libasan8_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking libasan8:s390x (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package libubsan1:s390x. 68s Preparing to unpack .../15-libubsan1_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking libubsan1:s390x (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package libgcc-15-dev:s390x. 68s Preparing to unpack .../16-libgcc-15-dev_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking libgcc-15-dev:s390x (15.2.0-5ubuntu1) ... 68s Selecting previously unselected package gcc-15-s390x-linux-gnu. 68s Preparing to unpack .../17-gcc-15-s390x-linux-gnu_15.2.0-5ubuntu1_s390x.deb ... 68s Unpacking gcc-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 69s Selecting previously unselected package gcc-15. 69s Preparing to unpack .../18-gcc-15_15.2.0-5ubuntu1_s390x.deb ... 69s Unpacking gcc-15 (15.2.0-5ubuntu1) ... 69s Selecting previously unselected package gcc-s390x-linux-gnu. 69s Preparing to unpack .../19-gcc-s390x-linux-gnu_4%3a15.2.0-4ubuntu1_s390x.deb ... 69s Unpacking gcc-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 69s Selecting previously unselected package gcc. 69s Preparing to unpack .../20-gcc_4%3a15.2.0-4ubuntu1_s390x.deb ... 69s Unpacking gcc (4:15.2.0-4ubuntu1) ... 69s Selecting previously unselected package libstdc++-15-dev:s390x. 69s Preparing to unpack .../21-libstdc++-15-dev_15.2.0-5ubuntu1_s390x.deb ... 69s Unpacking libstdc++-15-dev:s390x (15.2.0-5ubuntu1) ... 69s Selecting previously unselected package g++-15-s390x-linux-gnu. 69s Preparing to unpack .../22-g++-15-s390x-linux-gnu_15.2.0-5ubuntu1_s390x.deb ... 69s Unpacking g++-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 69s Selecting previously unselected package g++-15. 69s Preparing to unpack .../23-g++-15_15.2.0-5ubuntu1_s390x.deb ... 69s Unpacking g++-15 (15.2.0-5ubuntu1) ... 69s Selecting previously unselected package g++-s390x-linux-gnu. 69s Preparing to unpack .../24-g++-s390x-linux-gnu_4%3a15.2.0-4ubuntu1_s390x.deb ... 69s Unpacking g++-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 69s Selecting previously unselected package g++. 69s Preparing to unpack .../25-g++_4%3a15.2.0-4ubuntu1_s390x.deb ... 69s Unpacking g++ (4:15.2.0-4ubuntu1) ... 69s Selecting previously unselected package build-essential. 69s Preparing to unpack .../26-build-essential_12.12ubuntu1_s390x.deb ... 69s Unpacking build-essential (12.12ubuntu1) ... 69s Selecting previously unselected package cmake-data. 69s Preparing to unpack .../27-cmake-data_3.31.6-2ubuntu6_all.deb ... 69s Unpacking cmake-data (3.31.6-2ubuntu6) ... 69s Selecting previously unselected package libjsoncpp26:s390x. 69s Preparing to unpack .../28-libjsoncpp26_1.9.6-3_s390x.deb ... 69s Unpacking libjsoncpp26:s390x (1.9.6-3) ... 69s Selecting previously unselected package librhash1:s390x. 69s Preparing to unpack .../29-librhash1_1.4.6-1_s390x.deb ... 69s Unpacking librhash1:s390x (1.4.6-1) ... 69s Selecting previously unselected package cmake. 69s Preparing to unpack .../30-cmake_3.31.6-2ubuntu6_s390x.deb ... 69s Unpacking cmake (3.31.6-2ubuntu6) ... 69s Selecting previously unselected package libdebhelper-perl. 69s Preparing to unpack .../31-libdebhelper-perl_13.24.2ubuntu1_all.deb ... 69s Unpacking libdebhelper-perl (13.24.2ubuntu1) ... 69s Selecting previously unselected package libtool. 69s Preparing to unpack .../32-libtool_2.5.4-4build1_all.deb ... 69s Unpacking libtool (2.5.4-4build1) ... 69s Selecting previously unselected package dh-autoreconf. 69s Preparing to unpack .../33-dh-autoreconf_21_all.deb ... 69s Unpacking dh-autoreconf (21) ... 69s Selecting previously unselected package libarchive-zip-perl. 69s Preparing to unpack .../34-libarchive-zip-perl_1.68-1_all.deb ... 69s Unpacking libarchive-zip-perl (1.68-1) ... 69s Selecting previously unselected package libfile-stripnondeterminism-perl. 69s Preparing to unpack .../35-libfile-stripnondeterminism-perl_1.14.2-1_all.deb ... 69s Unpacking libfile-stripnondeterminism-perl (1.14.2-1) ... 69s Selecting previously unselected package dh-strip-nondeterminism. 69s Preparing to unpack .../36-dh-strip-nondeterminism_1.14.2-1_all.deb ... 69s Unpacking dh-strip-nondeterminism (1.14.2-1) ... 69s Selecting previously unselected package debugedit. 69s Preparing to unpack .../37-debugedit_1%3a5.2-3_s390x.deb ... 69s Unpacking debugedit (1:5.2-3) ... 69s Selecting previously unselected package dwz. 69s Preparing to unpack .../38-dwz_0.16-2_s390x.deb ... 69s Unpacking dwz (0.16-2) ... 69s Selecting previously unselected package gettext. 69s Preparing to unpack .../39-gettext_0.23.1-2build2_s390x.deb ... 69s Unpacking gettext (0.23.1-2build2) ... 69s Selecting previously unselected package intltool-debian. 69s Preparing to unpack .../40-intltool-debian_0.35.0+20060710.6_all.deb ... 69s Unpacking intltool-debian (0.35.0+20060710.6) ... 69s Selecting previously unselected package po-debconf. 69s Preparing to unpack .../41-po-debconf_1.0.21+nmu1_all.deb ... 69s Unpacking po-debconf (1.0.21+nmu1) ... 69s Selecting previously unselected package debhelper. 69s Preparing to unpack .../42-debhelper_13.24.2ubuntu1_all.deb ... 69s Unpacking debhelper (13.24.2ubuntu1) ... 69s Selecting previously unselected package lambda-align. 69s Preparing to unpack .../43-lambda-align_1.0.3-6_s390x.deb ... 69s Unpacking lambda-align (1.0.3-6) ... 69s Selecting previously unselected package libbz2-dev:s390x. 69s Preparing to unpack .../44-libbz2-dev_1.0.8-6build1_s390x.deb ... 69s Unpacking libbz2-dev:s390x (1.0.8-6build1) ... 69s Selecting previously unselected package libseqan2-dev. 69s Preparing to unpack .../45-libseqan2-dev_2.4.0+dfsg-16_all.deb ... 69s Unpacking libseqan2-dev (2.4.0+dfsg-16) ... 70s Selecting previously unselected package zlib1g-dev:s390x. 70s Preparing to unpack .../46-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_s390x.deb ... 70s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 70s Setting up libarchive-zip-perl (1.68-1) ... 70s Setting up libdebhelper-perl (13.24.2ubuntu1) ... 70s Setting up m4 (1.4.19-8) ... 70s Setting up libgomp1:s390x (15.2.0-5ubuntu1) ... 70s Setting up libseqan2-dev (2.4.0+dfsg-16) ... 70s Setting up autotools-dev (20240727.1) ... 70s Setting up libjsoncpp26:s390x (1.9.6-3) ... 70s Setting up libmpc3:s390x (1.3.1-1build3) ... 70s Setting up autopoint (0.23.1-2build2) ... 70s Setting up autoconf (2.72-3.1ubuntu1) ... 70s Setting up libubsan1:s390x (15.2.0-5ubuntu1) ... 70s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 70s Setting up dwz (0.16-2) ... 70s Setting up libasan8:s390x (15.2.0-5ubuntu1) ... 70s Setting up debugedit (1:5.2-3) ... 70s Setting up cmake-data (3.31.6-2ubuntu6) ... 70s Setting up librhash1:s390x (1.4.6-1) ... 70s Setting up lambda-align (1.0.3-6) ... 70s Setting up libisl23:s390x (0.27-1) ... 70s Setting up libcc1-0:s390x (15.2.0-5ubuntu1) ... 70s Setting up libitm1:s390x (15.2.0-5ubuntu1) ... 70s Setting up libbz2-dev:s390x (1.0.8-6build1) ... 70s Setting up automake (1:1.17-4ubuntu1) ... 70s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 70s Setting up libfile-stripnondeterminism-perl (1.14.2-1) ... 70s Setting up gettext (0.23.1-2build2) ... 70s Setting up libgcc-15-dev:s390x (15.2.0-5ubuntu1) ... 70s Setting up intltool-debian (0.35.0+20060710.6) ... 70s Setting up libstdc++-15-dev:s390x (15.2.0-5ubuntu1) ... 70s Setting up dh-strip-nondeterminism (1.14.2-1) ... 70s Setting up cpp-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 70s Setting up cmake (3.31.6-2ubuntu6) ... 70s Setting up gcc-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 70s Setting up g++-15-s390x-linux-gnu (15.2.0-5ubuntu1) ... 70s Setting up cpp-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 70s Setting up po-debconf (1.0.21+nmu1) ... 70s Setting up gcc-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 70s Setting up cpp-15 (15.2.0-5ubuntu1) ... 70s Setting up cpp (4:15.2.0-4ubuntu1) ... 70s Setting up g++-s390x-linux-gnu (4:15.2.0-4ubuntu1) ... 70s Setting up gcc-15 (15.2.0-5ubuntu1) ... 70s Setting up g++-15 (15.2.0-5ubuntu1) ... 70s Setting up libtool (2.5.4-4build1) ... 70s Setting up gcc (4:15.2.0-4ubuntu1) ... 70s Setting up dh-autoreconf (21) ... 70s Setting up g++ (4:15.2.0-4ubuntu1) ... 70s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 70s Setting up build-essential (12.12ubuntu1) ... 70s Setting up debhelper (13.24.2ubuntu1) ... 70s Processing triggers for install-info (7.1.1-1ubuntu1) ... 70s Processing triggers for libc-bin (2.42-0ubuntu3) ... 70s Processing triggers for man-db (2.13.1-1) ... 71s autopkgtest [21:03:05]: test run-tests: [----------------------- 71s + mkdir build 71s + cd build 71s + cmake -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON ../ 71s CMake Deprecation Warning at CMakeLists.txt:5 (cmake_minimum_required): 71s Compatibility with CMake < 3.10 will be removed from a future version of 71s CMake. 71s 71s Update the VERSION argument value. Or, use the ... syntax 71s to tell CMake that the project requires at least but has been updated 71s to work with policies introduced by or earlier. 71s 71s 71s Compiler Detection 71s -- The CXX compiler identification is GNU 15.2.0 71s -- Detecting CXX compiler ABI info 72s -- Detecting CXX compiler ABI info - done 72s -- Check for working CXX compiler: /usr/bin/c++ - skipped 72s -- Detecting CXX compile features 72s -- Detecting CXX compile features - done 72s 72s Dependency detection 72s CMake Warning (dev) at /usr/share/cmake/seqan/seqan-config.cmake:218 (EXEC_PROGRAM): 72s Policy CMP0153 is not set: The exec_program command should not be called. 72s Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy 72s command to set the policy and suppress this warning. 72s 72s Use execute_process() instead. 72s Call Stack (most recent call first): 72s src/CMakeLists.txt:31 (find_package) 72s This warning is for project developers. Use -Wno-dev to suppress it. 72s 72s -- These dependencies where found: 72s -- The requirements where met. 72s -- LAMBDA version is: 1.0.2 72s OPENMP TRUE -fopenmp 72s ZLIB TRUE 1.3.1 72s BZIP2 TRUE 1.0.8 72s SEQAN TRUE 2.4.0 72s 72s Build configuration 72s -- The following options are selected for the build: 72s -- Run 'cmake -LH' to get a comment on each option. 72s -- Remove CMakeCache.txt and re-run cmake with -DOPTIONNAME=ON|OFF to change an option. 72s LAMBDA_FASTBUILD OFF 72s LAMBDA_LINGAPS_OPT OFF 72s LAMBDA_MMAPPED_DB ON 72s LAMBDA_NATIVE_BUILD ON 72s LAMBDA_STATIC_BUILD OFF 72s 72s Setting up unit tests 72s CMake Deprecation Warning at tests/CMakeLists.txt:5 (cmake_minimum_required): 72s Compatibility with CMake < 3.10 will be removed from a future version of 72s CMake. 72s 72s Update the VERSION argument value. Or, use the ... syntax 72s to tell CMake that the project requires at least but has been updated 72s to work with policies introduced by or earlier. 72s 72s 72s -- Configuring done (0.5s) 72s -- Generating done (0.0s) 72s CMake Warning: 72s Manually-specified variables were not used by the project: 72s 72s CMAKE_EXPORT_NO_PACKAGE_REGISTRY 72s 72s 72s -- Build files have been written to: /tmp/autopkgtest.PGYc0d/build.GFl/src/build 72s + dpkg -L lambda-align 72s + grep bin/ 72s + ln -s /usr/bin/lambda bin/ 72s Test project /tmp/autopkgtest.PGYc0d/build.GFl/src/build/tests 72s Start 1: test_mkindex_blastn_sa 72s Start 2: test_mkindex_blastn_fm 72s + ln -s /usr/bin/lambda_indexer bin/ 72s + cd tests 72s + nproc 72s + ctest --parallel 2 73s 1/80 Test #1: test_mkindex_blastn_sa ...........***Failed 1.10 sec 73s Start 3: test_mkindex_blastp_sa 73s 2/80 Test #3: test_mkindex_blastp_sa ...........***Failed 0.03 sec 73s Start 4: test_mkindex_blastp_fm 73s 3/80 Test #4: test_mkindex_blastp_fm ...........***Failed 0.04 sec 73s Start 5: test_mkindex_blastx_sa 73s 4/80 Test #5: test_mkindex_blastx_sa ...........***Failed 0.03 sec 73s Start 6: test_mkindex_blastx_fm 73s 5/80 Test #6: test_mkindex_blastx_fm ...........***Failed 0.04 sec 73s Start 7: test_mkindex_tblastn_sa 73s 6/80 Test #7: test_mkindex_tblastn_sa ..........***Failed 0.20 sec 73s Start 8: test_mkindex_tblastn_fm 74s 7/80 Test #8: test_mkindex_tblastn_fm ..........***Failed 0.21 sec 74s Start 9: test_mkindex_tblastx_sa 74s 8/80 Test #9: test_mkindex_tblastx_sa ..........***Failed 0.20 sec 74s Start 10: test_mkindex_tblastx_fm 74s 9/80 Test #10: test_mkindex_tblastx_fm ..........***Failed 0.22 sec 74s Start 11: test_search_blastn_sa_m0 74s 10/80 Test #11: test_search_blastn_sa_m0 .........***Failed 0.14 sec 74s Start 12: test_search_blastn_sa_m8 74s 11/80 Test #12: test_search_blastn_sa_m8 .........***Failed 0.14 sec 74s Start 13: test_search_blastn_sa_m9 74s 12/80 Test #13: test_search_blastn_sa_m9 .........***Failed 0.14 sec 74s Start 14: test_search_blastn_sa_sam 75s 13/80 Test #14: test_search_blastn_sa_sam ........***Failed 0.14 sec 75s Start 15: test_search_blastn_sa_bam 75s 14/80 Test #15: test_search_blastn_sa_bam ........***Failed 0.14 sec 75s Start 16: test_search_blastn_sa_m9.gz 75s 15/80 Test #16: test_search_blastn_sa_m9.gz ......***Failed 0.16 sec 75s Start 17: test_search_blastn_sa_sam.bz2 75s 16/80 Test #2: test_mkindex_blastn_fm ...........***Failed 3.15 sec 75s Start 18: test_search_blastn_fm_m0 75s 17/80 Test #17: test_search_blastn_sa_sam.bz2 ....***Failed 0.23 sec 75s Start 19: test_search_blastn_fm_m8 75s 18/80 Test #18: test_search_blastn_fm_m0 .........***Failed 0.24 sec 75s Start 20: test_search_blastn_fm_m9 75s 19/80 Test #19: test_search_blastn_fm_m8 .........***Failed 0.24 sec 75s Start 21: test_search_blastn_fm_sam 76s 20/80 Test #20: test_search_blastn_fm_m9 .........***Failed 0.24 sec 76s Start 22: test_search_blastn_fm_bam 76s 21/80 Test #21: test_search_blastn_fm_sam ........***Failed 0.24 sec 76s Start 23: test_search_blastn_fm_m9.gz 76s 22/80 Test #22: test_search_blastn_fm_bam ........***Failed 0.24 sec 76s Start 24: test_search_blastn_fm_sam.bz2 76s 23/80 Test #23: test_search_blastn_fm_m9.gz ......***Failed 0.24 sec 76s Start 25: test_search_blastp_sa_m0 76s 24/80 Test #25: test_search_blastp_sa_m0 .........***Failed 0.04 sec 76s Start 26: test_search_blastp_sa_m8 76s 25/80 Test #26: test_search_blastp_sa_m8 .........***Failed 0.06 sec 76s Start 27: test_search_blastp_sa_m9 76s 26/80 Test #24: test_search_blastn_fm_sam.bz2 ....***Failed 0.20 sec 76s Start 28: test_search_blastp_sa_sam 76s 27/80 Test #27: test_search_blastp_sa_m9 .........***Failed 0.08 sec 76s Start 29: test_search_blastp_sa_bam 76s 28/80 Test #28: test_search_blastp_sa_sam ........***Failed 0.04 sec 76s Start 30: test_search_blastp_sa_m9.gz 76s 29/80 Test #29: test_search_blastp_sa_bam ........***Failed 0.04 sec 76s Start 31: test_search_blastp_sa_sam.bz2 76s 30/80 Test #30: test_search_blastp_sa_m9.gz ......***Failed 0.04 sec 76s Start 32: test_search_blastp_fm_m0 76s 31/80 Test #31: test_search_blastp_sa_sam.bz2 ....***Failed 0.05 sec 76s Start 33: test_search_blastp_fm_m8 76s 32/80 Test #32: test_search_blastp_fm_m0 .........***Failed 0.05 sec 76s Start 34: test_search_blastp_fm_m9 76s 33/80 Test #33: test_search_blastp_fm_m8 .........***Failed 0.05 sec 76s Start 35: test_search_blastp_fm_sam 76s 34/80 Test #34: test_search_blastp_fm_m9 .........***Failed 0.05 sec 76s Start 36: test_search_blastp_fm_bam 76s 35/80 Test #35: test_search_blastp_fm_sam ........***Failed 0.05 sec 76s Start 37: test_search_blastp_fm_m9.gz 76s 36/80 Test #36: test_search_blastp_fm_bam ........***Failed 0.05 sec 76s Start 38: test_search_blastp_fm_sam.bz2 76s 37/80 Test #37: test_search_blastp_fm_m9.gz ......***Failed 0.05 sec 76s Start 39: test_search_blastx_sa_m0 76s 38/80 Test #38: test_search_blastp_fm_sam.bz2 ....***Failed 0.05 sec 76s Start 40: test_search_blastx_sa_m8 76s 39/80 Test #39: test_search_blastx_sa_m0 .........***Failed 0.05 sec 76s Start 41: test_search_blastx_sa_m9 76s 40/80 Test #40: test_search_blastx_sa_m8 .........***Failed 0.04 sec 76s Start 42: test_search_blastx_sa_sam 76s 41/80 Test #41: test_search_blastx_sa_m9 .........***Failed 0.05 sec 76s Start 43: test_search_blastx_sa_bam 76s 42/80 Test #42: test_search_blastx_sa_sam ........***Failed 0.05 sec 76s Start 44: test_search_blastx_sa_m9.gz 76s 43/80 Test #43: test_search_blastx_sa_bam ........***Failed 0.05 sec 76s Start 45: test_search_blastx_sa_sam.bz2 76s 44/80 Test #44: test_search_blastx_sa_m9.gz ......***Failed 0.05 sec 76s Start 46: test_search_blastx_fm_m0 76s 45/80 Test #45: test_search_blastx_sa_sam.bz2 ....***Failed 0.05 sec 76s Start 47: test_search_blastx_fm_m8 76s 46/80 Test #46: test_search_blastx_fm_m0 .........***Failed 0.05 sec 76s Start 48: test_search_blastx_fm_m9 76s 47/80 Test #47: test_search_blastx_fm_m8 .........***Failed 0.05 sec 76s Start 49: test_search_blastx_fm_sam 77s 48/80 Test #48: test_search_blastx_fm_m9 .........***Failed 0.05 sec 77s Start 50: test_search_blastx_fm_bam 77s 49/80 Test #49: test_search_blastx_fm_sam ........***Failed 0.05 sec 77s Start 51: test_search_blastx_fm_m9.gz 77s 50/80 Test #50: test_search_blastx_fm_bam ........***Failed 0.05 sec 77s Start 52: test_search_blastx_fm_sam.bz2 77s 51/80 Test #51: test_search_blastx_fm_m9.gz ......***Failed 0.05 sec 77s Start 53: test_search_tblastn_sa_m0 77s 52/80 Test #52: test_search_blastx_fm_sam.bz2 ....***Failed 0.05 sec 77s Start 54: test_search_tblastn_sa_m8 77s 53/80 Test #53: test_search_tblastn_sa_m0 ........***Failed 0.35 sec 77s Start 55: test_search_tblastn_sa_m9 77s 54/80 Test #54: test_search_tblastn_sa_m8 ........***Failed 0.36 sec 77s Start 56: test_search_tblastn_sa_sam 77s 55/80 Test #55: test_search_tblastn_sa_m9 ........***Failed 0.36 sec 77s Start 57: test_search_tblastn_sa_bam 77s 56/80 Test #56: test_search_tblastn_sa_sam .......***Failed 0.36 sec 77s Start 58: test_search_tblastn_sa_m9.gz 78s 57/80 Test #57: test_search_tblastn_sa_bam .......***Failed 0.36 sec 78s Start 59: test_search_tblastn_sa_sam.bz2 78s 58/80 Test #58: test_search_tblastn_sa_m9.gz .....***Failed 0.33 sec 78s Start 60: test_search_tblastn_fm_m0 78s 59/80 Test #59: test_search_tblastn_sa_sam.bz2 ...***Failed 0.33 sec 78s Start 61: test_search_tblastn_fm_m8 78s 60/80 Test #60: test_search_tblastn_fm_m0 ........***Failed 0.34 sec 78s Start 62: test_search_tblastn_fm_m9 78s 61/80 Test #61: test_search_tblastn_fm_m8 ........***Failed 0.31 sec 78s Start 63: test_search_tblastn_fm_sam 78s 62/80 Test #62: test_search_tblastn_fm_m9 ........***Failed 0.37 sec 78s Start 64: test_search_tblastn_fm_bam 79s 63/80 Test #63: test_search_tblastn_fm_sam .......***Failed 0.37 sec 79s Start 65: test_search_tblastn_fm_m9.gz 79s 64/80 Test #64: test_search_tblastn_fm_bam .......***Failed 0.32 sec 79s Start 66: test_search_tblastn_fm_sam.bz2 79s 65/80 Test #65: test_search_tblastn_fm_m9.gz .....***Failed 0.35 sec 79s Start 67: test_search_tblastx_sa_m0 79s 66/80 Test #66: test_search_tblastn_fm_sam.bz2 ...***Failed 0.34 sec 79s Start 68: test_search_tblastx_sa_m8 79s 67/80 Test #67: test_search_tblastx_sa_m0 ........***Failed 0.33 sec 79s Start 69: test_search_tblastx_sa_m9 79s 68/80 Test #68: test_search_tblastx_sa_m8 ........***Failed 0.32 sec 79s Start 70: test_search_tblastx_sa_sam 80s 69/80 Test #69: test_search_tblastx_sa_m9 ........***Failed 0.34 sec 80s Start 71: test_search_tblastx_sa_bam 80s 70/80 Test #70: test_search_tblastx_sa_sam .......***Failed 0.32 sec 80s Start 72: test_search_tblastx_sa_m9.gz 80s 71/80 Test #71: test_search_tblastx_sa_bam .......***Failed 0.33 sec 80s Start 73: test_search_tblastx_sa_sam.bz2 80s 72/80 Test #72: test_search_tblastx_sa_m9.gz .....***Failed 0.33 sec 80s Start 74: test_search_tblastx_fm_m0 80s 73/80 Test #73: test_search_tblastx_sa_sam.bz2 ...***Failed 0.32 sec 80s Start 75: test_search_tblastx_fm_m8 80s 74/80 Test #74: test_search_tblastx_fm_m0 ........***Failed 0.34 sec 80s Start 76: test_search_tblastx_fm_m9 81s 75/80 Test #75: test_search_tblastx_fm_m8 ........***Failed 0.36 sec 81s Start 77: test_search_tblastx_fm_sam 81s 76/80 Test #76: test_search_tblastx_fm_m9 ........***Failed 0.36 sec 81s Start 78: test_search_tblastx_fm_bam 81s 77/80 Test #77: test_search_tblastx_fm_sam .......***Failed 0.36 sec 81s Start 79: test_search_tblastx_fm_m9.gz 81s 78/80 Test #78: test_search_tblastx_fm_bam .......***Failed 0.35 sec 81s Start 80: test_search_tblastx_fm_sam.bz2 81s 79/80 Test #79: test_search_tblastx_fm_m9.gz .....***Failed 0.34 sec 81s 80/80 Test #80: test_search_tblastx_fm_sam.bz2 ...***Failed 0.35 sec 81s 81s 0% tests passed, 80 tests failed out of 80 81s 81s Total Test time (real) = 9.49 sec 81s 81s The following tests FAILED: 81s 1 - test_mkindex_blastn_sa (Failed) 81s 2 - test_mkindex_blastn_fm (Failed) 81s 3 - test_mkindex_blastp_sa (Failed) 81s 4 - test_mkindex_blastp_fm (Failed) 81s 5 - test_mkindex_blastx_sa (Failed) 81s 6 - test_mkindex_blastx_fm (Failed) 81s 7 - test_mkindex_tblastn_sa (Failed) 81s 8 - test_mkindex_tblastn_fm (Failed) 81s 9 - test_mkindex_tblastx_sa (Failed) 81s 10 - test_mkindex_tblastx_fm (Failed) 81s 11 - test_search_blastn_sa_m0 (Failed) 81s 12 - test_search_blastn_sa_m8 (Failed) 81s 13 - test_search_blastn_sa_m9 (Failed) 81s 14 - test_search_blastn_sa_sam (Failed) 81s 15 - test_search_blastn_sa_bam (Failed) 81s 16 - test_search_blastn_sa_m9.gz (Failed) 81s 17 - test_search_blastn_sa_sam.bz2 (Failed) 81s 18 - test_search_blastn_fm_m0 (Failed) 81s 19 - test_search_blastn_fm_m8 (Failed) 81s 20 - test_search_blastn_fm_m9 (Failed) 81s 21 - test_search_blastn_fm_sam (Failed) 81s 22 - test_search_blastn_fm_bam (Failed) 81s 23 - test_search_blastn_fm_m9.gz (Failed) 81s 24 - test_search_blastn_fm_sam.bz2 (Failed) 81s 25 - test_search_blastp_sa_m0 (Failed) 81s 26 - test_search_blastp_sa_m8 (Failed) 81s 27 - test_search_blastp_sa_m9 (Failed) 81s 28 - test_search_blastp_sa_sam (Failed) 81s 29 - test_search_blastp_sa_bam (Failed) 81s 30 - test_search_blastp_sa_m9.gz (Failed) 81s 31 - test_search_blastp_sa_sam.bz2 (Failed) 81s 32 - test_search_blastp_fm_m0 (Failed) 81s 33 - test_search_blastp_fm_m8 (Failed) 81s 34 - test_search_blastp_fm_m9 (Failed) 81s 35 - test_search_blastp_fm_sam (Failed) 81s 36 - test_search_blastp_fm_bam (Failed) 81s 37 - test_search_blastp_fm_m9.gz (Failed) 81s 38 - test_search_blastp_fm_sam.bz2 (Failed) 81s 39 - test_search_blastx_sa_m0 (Failed) 81s Errors while running CTest 81s Output from these tests are in: /tmp/autopkgtest.PGYc0d/build.GFl/src/build/tests/Testing/Temporary/LastTest.log 81s Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely. 81s 40 - test_search_blastx_sa_m8 (Failed) 81s 41 - test_search_blastx_sa_m9 (Failed) 81s 42 - test_search_blastx_sa_sam (Failed) 81s 43 - test_search_blastx_sa_bam (Failed) 81s 44 - test_search_blastx_sa_m9.gz (Failed) 81s 45 - test_search_blastx_sa_sam.bz2 (Failed) 81s 46 - test_search_blastx_fm_m0 (Failed) 81s 47 - test_search_blastx_fm_m8 (Failed) 81s 48 - test_search_blastx_fm_m9 (Failed) 81s 49 - test_search_blastx_fm_sam (Failed) 81s 50 - test_search_blastx_fm_bam (Failed) 81s 51 - test_search_blastx_fm_m9.gz (Failed) 81s 52 - test_search_blastx_fm_sam.bz2 (Failed) 81s 53 - test_search_tblastn_sa_m0 (Failed) 81s 54 - test_search_tblastn_sa_m8 (Failed) 81s 55 - test_search_tblastn_sa_m9 (Failed) 81s 56 - test_search_tblastn_sa_sam (Failed) 81s 57 - test_search_tblastn_sa_bam (Failed) 81s 58 - test_search_tblastn_sa_m9.gz (Failed) 81s 59 - test_search_tblastn_sa_sam.bz2 (Failed) 81s 60 - test_search_tblastn_fm_m0 (Failed) 81s 61 - test_search_tblastn_fm_m8 (Failed) 81s 62 - test_search_tblastn_fm_m9 (Failed) 81s 63 - test_search_tblastn_fm_sam (Failed) 81s 64 - test_search_tblastn_fm_bam (Failed) 81s 65 - test_search_tblastn_fm_m9.gz (Failed) 81s 66 - test_search_tblastn_fm_sam.bz2 (Failed) 81s 67 - test_search_tblastx_sa_m0 (Failed) 81s 68 - test_search_tblastx_sa_m8 (Failed) 81s 69 - test_search_tblastx_sa_m9 (Failed) 81s 70 - test_search_tblastx_sa_sam (Failed) 81s 71 - test_search_tblastx_sa_bam (Failed) 81s 72 - test_search_tblastx_sa_m9.gz (Failed) 81s 73 - test_search_tblastx_sa_sam.bz2 (Failed) 81s 74 - test_search_tblastx_fm_m0 (Failed) 81s 75 - test_search_tblastx_fm_m8 (Failed) 81s 76 - test_search_tblastx_fm_m9 (Failed) 81s 77 - test_search_tblastx_fm_sam (Failed) 81s 78 - test_search_tblastx_fm_bam (Failed) 81s 79 - test_search_tblastx_fm_m9.gz (Failed) 81s 80 - test_search_tblastx_fm_sam.bz2 (Failed) 82s autopkgtest [21:03:16]: test run-tests: -----------------------] 82s autopkgtest [21:03:16]: test run-tests: - - - - - - - - - - results - - - - - - - - - - 82s run-tests FAIL non-zero exit status 8 83s autopkgtest [21:03:17]: @@@@@@@@@@@@@@@@@@@@ summary 83s run-tests FAIL non-zero exit status 8