0s autopkgtest [23:25:41]: starting date and time: 2026-02-09 23:25:41+0000 0s autopkgtest [23:25:41]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [23:25:41]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.jm67f67y/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-cran-gstat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-ppc64el-13.secgroup --name adt-resolute-ppc64el-r-cran-gstat-20260209-232541-juju-7f2275-prod-proposed-migration-environment-2-c1183632-f874-4558-98b4-6104f80c7002 --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-ppc64el-r-cran-gstat-20260209-232541-juju-7f2275-prod-proposed-migration-environment-2-c1183632-f874-4558-98b4-6104f80c7002 from image adt/ubuntu-resolute-ppc64el-server-20260209.img (UUID f7f31435-4cd1-4090-aa55-59cfefa097ca)... 124s autopkgtest [23:27:45]: testbed dpkg architecture: ppc64el 124s autopkgtest [23:27:45]: testbed apt version: 3.1.15 125s autopkgtest [23:27:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup 125s autopkgtest [23:27:46]: testbed release detected to be: None 125s autopkgtest [23:27:46]: updating testbed package index (apt update) 126s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 126s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 126s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 126s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 126s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 126s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 126s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 129s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [246 kB] 129s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1534 kB] 132s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [19.4 kB] 132s Fetched 3774 kB in 7s (573 kB/s) 133s Reading package lists... 134s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 134s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 134s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 134s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 135s Reading package lists... 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 135s Calculating upgrade... 135s The following packages will be upgraded: 135s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 135s libip6tc2 libxtables12 wget 135s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 135s Need to get 3125 kB of archives. 135s After this operation, 78.8 kB of additional disk space will be used. 135s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el iptables ppc64el 1.8.11-2ubuntu3 [464 kB] 135s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip4tc2 ppc64el 1.8.11-2ubuntu3 [27.8 kB] 135s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip6tc2 ppc64el 1.8.11-2ubuntu3 [28.2 kB] 135s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxtables12 ppc64el 1.8.11-2ubuntu3 [41.2 kB] 135s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el iproute2 ppc64el 6.18.0-1ubuntu1 [1458 kB] 139s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcryptsetup12 ppc64el 2:2.8.0-1ubuntu3 [404 kB] 139s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el wget ppc64el 1.25.0-2ubuntu4 [401 kB] 139s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cryptsetup-bin ppc64el 2:2.8.0-1ubuntu3 [250 kB] 139s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el dracut-install ppc64el 109-11ubuntu1 [51.3 kB] 139s dpkg-preconfigure: unable to re-open stdin: No such file or directory 140s Fetched 3125 kB in 4s (815 kB/s) 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122003 files and directories currently installed.) 142s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_ppc64el.deb ... 142s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 142s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_ppc64el.deb ... 142s Unpacking libip4tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 142s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_ppc64el.deb ... 142s Unpacking libip6tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 142s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_ppc64el.deb ... 142s Unpacking libxtables12:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 143s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_ppc64el.deb ... 143s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 143s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 143s Unpacking libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 143s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_ppc64el.deb ... 143s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 143s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 143s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 143s Preparing to unpack .../8-dracut-install_109-11ubuntu1_ppc64el.deb ... 143s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 144s Setting up libip4tc2:ppc64el (1.8.11-2ubuntu3) ... 144s Setting up wget (1.25.0-2ubuntu4) ... 144s Setting up libip6tc2:ppc64el (1.8.11-2ubuntu3) ... 144s Setting up libxtables12:ppc64el (1.8.11-2ubuntu3) ... 144s Setting up dracut-install (109-11ubuntu1) ... 144s Setting up libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) ... 144s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 144s Setting up iptables (1.8.11-2ubuntu3) ... 144s Setting up iproute2 (6.18.0-1ubuntu1) ... 144s Processing triggers for man-db (2.13.1-1build1) ... 145s Processing triggers for install-info (7.2-5) ... 145s Processing triggers for libc-bin (2.42-2ubuntu4) ... 146s autopkgtest [23:28:07]: upgrading testbed (apt dist-upgrade and autopurge) 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s Calculating upgrade... 146s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s Solving dependencies... 147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 149s autopkgtest [23:28:10]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:13:51 UTC 2026 149s autopkgtest [23:28:10]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-gstat 154s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-gstat 2.1-3-2 (dsc) [2319 B] 154s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-gstat 2.1-3-2 (tar) [2283 kB] 154s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-gstat 2.1-3-2 (diff) [3816 B] 154s gpgv: Signature made Wed Oct 15 12:45:30 2025 UTC 154s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 154s gpgv: issuer "tille@debian.org" 154s gpgv: Can't check signature: No public key 154s dpkg-source: warning: cannot verify inline signature for ./r-cran-gstat_2.1-3-2.dsc: no acceptable signature found 154s autopkgtest [23:28:15]: testing package r-cran-gstat version 2.1-3-2 154s autopkgtest [23:28:15]: build not needed 156s autopkgtest [23:28:17]: test run-unit-test: preparing testbed 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 156s Solving dependencies... 156s The following NEW packages will be installed: 156s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gdal-data 156s gdal-plugins libabsl20260107 libaec0 libaom3 libarmadillo15 libarpack2t64 156s libavif16 libblas3 libblosc1 libcairo2 libcfitsio10t64 libdatrie1 libdav1d7 156s libde265-0 libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 libgav1-2 156s libgdal38 libgeos-c1t64 libgeos3.14.1 libgeotiff5 libgfortran5 libgif7 156s libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0 libhdf5-310 156s libhdf5-hl-310 libheif-plugin-aomdec libheif-plugin-libde265 libheif1 156s libhwy1t64 libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjxl0.11 156s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 156s libltdl7 libminizip1t64 libmuparser2v5 libmysqlclient24 libnetcdf22 libodbc2 156s libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 156s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libpoppler147 156s libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 156s libspatialite8t64 libsuperlu7 libsz2 libtcl8.6 libthai-data libthai0 156s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 156s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 156s libxt6t64 libyuv0 mysql-common proj-data r-base-core r-cran-abind 156s r-cran-class r-cran-classint r-cran-cli r-cran-codetools r-cran-dbi 156s r-cran-digest r-cran-dotcall64 r-cran-e1071 r-cran-farver r-cran-fields 156s r-cran-fnn r-cran-future r-cran-future.apply r-cran-ggplot2 r-cran-globals 156s r-cran-glue r-cran-gstat r-cran-gtable r-cran-intervals r-cran-isoband 156s r-cran-kernsmooth r-cran-labeling r-cran-lattice r-cran-lifecycle 156s r-cran-listenv r-cran-littler r-cran-magrittr r-cran-mapdata r-cran-maps 156s r-cran-mass r-cran-parallelly r-cran-pkgkitten r-cran-proxy r-cran-r6 156s r-cran-raster r-cran-rcolorbrewer r-cran-rcpp r-cran-rlang r-cran-s2 156s r-cran-s7 r-cran-scales r-cran-sf r-cran-sftime r-cran-sp r-cran-spacetime 156s r-cran-spam r-cran-stars r-cran-terra r-cran-units r-cran-vctrs 156s r-cran-viridislite r-cran-withr r-cran-wk r-cran-xts r-cran-zoo 156s unixodbc-common unzip x11-common xdg-utils zip 156s 0 upgraded, 158 newly installed, 0 to remove and 0 not upgraded. 156s Need to get 172 MB of archives. 156s After this operation, 392 MB of additional disk space will be used. 156s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-mono all 2.37-8build1 [502 kB] 156s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-core all 2.37-8build1 [834 kB] 158s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig-config ppc64el 2.17.1-3ubuntu1 [38.5 kB] 158s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libfontconfig1 ppc64el 2.17.1-3ubuntu1 [193 kB] 158s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig ppc64el 2.17.1-3ubuntu1 [182 kB] 158s Get:6 http://ftpmaster.internal/ubuntu resolute/universe ppc64el gdal-data all 3.12.1+dfsg-1 [278 kB] 158s Get:7 http://ftpmaster.internal/ubuntu resolute/universe ppc64el gdal-plugins ppc64el 3.12.1+dfsg-1 [26.8 kB] 158s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el libabsl20260107 ppc64el 20260107.0-1 [729 kB] 159s Get:9 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libaec0 ppc64el 1.1.5-1 [29.7 kB] 159s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el libaom3 ppc64el 3.13.1-2 [2908 kB] 165s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas3 ppc64el 3.12.1-7ubuntu1 [291 kB] 165s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran5 ppc64el 15.2.0-12ubuntu1 [620 kB] 166s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack3 ppc64el 3.12.1-7ubuntu1 [2960 kB] 171s Get:14 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libarpack2t64 ppc64el 3.9.1-6 [107 kB] 171s Get:15 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsuperlu7 ppc64el 7.0.1+dfsg1-2 [237 kB] 171s Get:16 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libarmadillo15 ppc64el 1:15.2.1+dfsg-2 [114 kB] 172s Get:17 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libdav1d7 ppc64el 1.5.3-1 [600 kB] 173s Get:18 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgav1-2 ppc64el 0.20.0-2build1 [897 kB] 174s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-4ubuntu3 [214 kB] 174s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 174s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el libyuv0 ppc64el 0.0.1922.20260106-1 [267 kB] 174s Get:22 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libavif16 ppc64el 1.3.0-1ubuntu3 [160 kB] 174s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsnappy1v5 ppc64el 1.2.2-2 [33.5 kB] 174s Get:24 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libblosc1 ppc64el 1.21.5+ds-2 [35.0 kB] 174s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpixman-1-0 ppc64el 0.46.4-1 [347 kB] 174s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-render0 ppc64el 1.17.0-2ubuntu1 [17.4 kB] 174s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-shm0 ppc64el 1.17.0-2ubuntu1 [6072 B] 174s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxrender1 ppc64el 1:0.9.12-1 [23.0 kB] 174s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcairo2 ppc64el 1.18.4-3 [759 kB] 175s Get:30 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libcfitsio10t64 ppc64el 4.6.3-1 [751 kB] 176s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdatrie1 ppc64el 0.2.14-1 [22.7 kB] 176s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el libde265-0 ppc64el 1.0.16-1build1 [300 kB] 176s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate0 ppc64el 1.23-2build1 [64.1 kB] 176s Get:34 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libfyba0t64 ppc64el 4.1.1-11build2 [149 kB] 177s Get:35 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libminizip1t64 ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [25.7 kB] 177s Get:36 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libfreexl1 ppc64el 2.0.0-1build3 [54.0 kB] 177s Get:37 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgeos3.14.1 ppc64el 3.14.1-2 [1129 kB] 178s Get:38 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgeos-c1t64 ppc64el 3.14.1-2 [124 kB] 178s Get:39 http://ftpmaster.internal/ubuntu resolute/universe ppc64el proj-data all 9.7.1-1 [7950 kB] 192s Get:40 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu3 [37.1 kB] 192s Get:41 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu2 [315 kB] 192s Get:42 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1build1 [24.7 kB] 192s Get:43 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebp7 ppc64el 1.5.0-0.1build1 [330 kB] 192s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu3 [307 kB] 192s Get:45 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libproj25 ppc64el 9.7.1-1 [1580 kB] 195s Get:46 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgeotiff5 ppc64el 1.7.4-1build1 [64.7 kB] 195s Get:47 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgif7 ppc64el 5.2.2-1ubuntu3 [40.9 kB] 195s Get:48 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsz2 ppc64el 1.1.5-1 [25.3 kB] 195s Get:49 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf4-0 ppc64el 4.3.1-2 [339 kB] 195s Get:50 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-310 ppc64el 1.14.6+repack-2 [1545 kB] 197s Get:51 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif-plugin-aomdec ppc64el 1.21.2-1 [14.4 kB] 197s Get:52 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif-plugin-libde265 ppc64el 1.21.2-1 [10.2 kB] 197s Get:53 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif1 ppc64el 1.21.2-1 [657 kB] 198s Get:54 http://ftpmaster.internal/ubuntu resolute/main ppc64el libhwy1t64 ppc64el 1.3.0-2 [251 kB] 198s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblcms2-2 ppc64el 2.17-1 [246 kB] 198s Get:56 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjxl0.11 ppc64el 0.11.1-6ubuntu1 [1411 kB] 201s Get:57 http://ftpmaster.internal/ubuntu resolute/universe ppc64el liburiparser1 ppc64el 0.9.8+dfsg-2 [52.7 kB] 201s Get:58 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libkmlbase1t64 ppc64el 1.3.0-13 [58.1 kB] 201s Get:59 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libkmldom1t64 ppc64el 1.3.0-13 [168 kB] 201s Get:60 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libkmlengine1t64 ppc64el 1.3.0-13 [78.7 kB] 201s Get:61 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-12ubuntu1 [169 kB] 201s Get:62 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libmuparser2v5 ppc64el 2.3.4-2 [143 kB] 201s Get:63 http://ftpmaster.internal/ubuntu resolute/main ppc64el mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 201s Get:64 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmysqlclient24 ppc64el 8.4.8-0ubuntu1 [1304 kB] 203s Get:65 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-hl-310 ppc64el 1.14.6+repack-2 [76.3 kB] 203s Get:66 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libnetcdf22 ppc64el 1:4.9.3-1build1 [690 kB] 204s Get:67 http://ftpmaster.internal/ubuntu resolute/main ppc64el libltdl7 ppc64el 2.5.4-9 [51.5 kB] 204s Get:68 http://ftpmaster.internal/ubuntu resolute/main ppc64el libodbc2 ppc64el 2.3.14-1 [192 kB] 204s Get:69 http://ftpmaster.internal/ubuntu resolute/main ppc64el unixodbc-common all 2.3.14-1 [8792 B] 204s Get:70 http://ftpmaster.internal/ubuntu resolute/main ppc64el libodbcinst2 ppc64el 2.3.14-1 [39.3 kB] 204s Get:71 http://ftpmaster.internal/ubuntu resolute/main ppc64el libopenjp2-7 ppc64el 2.5.4-1 [251 kB] 204s Get:72 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgpgmepp6t64 ppc64el 1.24.2-3ubuntu2 [135 kB] 204s Get:73 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpoppler147 ppc64el 25.03.0-11.1 [1442 kB] 207s Get:74 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpq5 ppc64el 18.1-2 [198 kB] 207s Get:75 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libqhull-r8.0 ppc64el 2020.2-8 [227 kB] 207s Get:76 http://ftpmaster.internal/ubuntu resolute/universe ppc64el librttopo1 ppc64el 1.1.0-4build1 [237 kB] 207s Get:77 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libspatialite8t64 ppc64el 5.1.0-3ubuntu1 [2237 kB] 211s Get:78 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libxerces-c3.2t64 ppc64el 3.2.4+debian-1.3build2 [1098 kB] 213s Get:79 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgdal38 ppc64el 3.12.1+dfsg-1 [12.7 MB] 238s Get:80 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgraphite2-3 ppc64el 1.3.14-11ubuntu1 [85.3 kB] 238s Get:81 http://ftpmaster.internal/ubuntu resolute/main ppc64el libharfbuzz0b ppc64el 12.3.2-1 [663 kB] 240s Get:82 http://ftpmaster.internal/ubuntu resolute/main ppc64el x11-common all 1:7.7+24ubuntu1 [22.4 kB] 240s Get:83 http://ftpmaster.internal/ubuntu resolute/main ppc64el libice6 ppc64el 2:1.1.1-1build1 [51.9 kB] 240s Get:84 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai-data all 0.1.30-1 [155 kB] 240s Get:85 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai0 ppc64el 0.1.30-1 [22.5 kB] 240s Get:86 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpango-1.0-0 ppc64el 1.57.0-1 [283 kB] 240s Get:87 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangoft2-1.0-0 ppc64el 1.57.0-1 [61.2 kB] 240s Get:88 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangocairo-1.0-0 ppc64el 1.57.0-1 [31.0 kB] 240s Get:89 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper2 ppc64el 2.2.5-0.3build1 [18.1 kB] 240s Get:90 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper-utils ppc64el 2.2.5-0.3build1 [15.7 kB] 240s Get:91 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsm6 ppc64el 2:1.2.6-1build1 [18.6 kB] 240s Get:92 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtcl8.6 ppc64el 8.6.17+dfsg-1build1 [1239 kB] 242s Get:93 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxft2 ppc64el 2.3.6-1build2 [61.6 kB] 242s Get:94 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxss1 ppc64el 1:1.2.3-1build4 [7470 B] 242s Get:95 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtk8.6 ppc64el 8.6.17-1 [968 kB] 244s Get:96 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libudunits2-data all 2.2.28-8 [19.3 kB] 244s Get:97 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libudunits2-0 ppc64el 2.2.28-8 [66.4 kB] 244s Get:98 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.3 [203 kB] 244s Get:99 http://ftpmaster.internal/ubuntu resolute/main ppc64el zip ppc64el 3.0-15ubuntu3 [198 kB] 244s Get:100 http://ftpmaster.internal/ubuntu resolute/main ppc64el unzip ppc64el 6.0-29ubuntu1 [200 kB] 244s Get:101 http://ftpmaster.internal/ubuntu resolute/main ppc64el xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 244s Get:102 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-core ppc64el 4.5.2-1ubuntu2 [29.3 MB] 307s Get:103 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-abind all 1.4-8-1build1 [67.0 kB] 307s Get:104 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mass ppc64el 7.3-65-1 [1116 kB] 309s Get:105 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-class ppc64el 7.3-23-1 [94.5 kB] 309s Get:106 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-proxy ppc64el 0.4-27-1 [185 kB] 309s Get:107 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-e1071 ppc64el 1.7-17-1 [595 kB] 310s Get:108 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-kernsmooth ppc64el 2.23-26-1build1 [96.8 kB] 310s Get:109 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-classint ppc64el 0.4-11+dfsg-1 [109 kB] 310s Get:110 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cli ppc64el 3.6.4-1 [1411 kB] 312s Get:111 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-codetools all 0.2-20-1build1 [91.1 kB] 312s Get:112 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dbi all 1.2.3-1build1 [855 kB] 314s Get:113 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-digest ppc64el 0.6.39-1 [238 kB] 314s Get:114 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dotcall64 ppc64el 1.2-1 [40.7 kB] 314s Get:115 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-farver ppc64el 2.1.2-1 [1389 kB] 316s Get:116 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-littler ppc64el 0.3.22-1 [85.5 kB] 316s Get:117 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 316s Get:118 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcpp ppc64el 1.1.0-1 [2037 kB] 320s Get:119 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-spam ppc64el 2.11-1-1 [2767 kB] 325s Get:120 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-viridislite all 0.4.3-1 [1088 kB] 327s Get:121 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-maps ppc64el 3.4.2.1-1 [2354 kB] 331s Get:122 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fields ppc64el 16.3.1-1 [3771 kB] 339s Get:123 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fnn ppc64el 1.1.4.1-1 [137 kB] 339s Get:124 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-globals all 0.19.0-1 [160 kB] 339s Get:125 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 339s Get:126 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-parallelly ppc64el 1.42.0-1 [540 kB] 340s Get:127 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-future all 1.34.0+dfsg-1 [646 kB] 342s Get:128 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 342s Get:129 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-glue ppc64el 1.8.0-1 [165 kB] 342s Get:130 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rlang ppc64el 1.1.5-3 [1738 kB] 345s Get:131 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 345s Get:132 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 345s Get:133 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 348s Get:134 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-s7 ppc64el 0.2.0-1 [330 kB] 348s Get:135 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 348s Get:136 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-r6 all 2.6.1-1 [101 kB] 348s Get:137 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 348s Get:138 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-scales all 1.4.0-1 [725 kB] 350s Get:139 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 354s Get:140 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-withr all 3.0.2+dfsg-1 [214 kB] 354s Get:141 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 368s Get:142 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lattice ppc64el 0.22-7-1 [1366 kB] 371s Get:143 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sp ppc64el 1:2.2-0+dfsg-1 [1446 kB] 374s Get:144 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-zoo ppc64el 1.8-15-1 [1028 kB] 376s Get:145 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 376s Get:146 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-wk ppc64el 0.9.4-1 [1815 kB] 379s Get:147 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-s2 ppc64el 1.1.9-1build1 [1919 kB] 383s Get:148 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-units ppc64el 0.8-7+dfsg-2 [295 kB] 383s Get:149 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sf ppc64el 1.0-19+dfsg-2build2 [3287 kB] 390s Get:150 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sftime all 0.2-0-6 [168 kB] 390s Get:151 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xts ppc64el 0.14.1-1 [1209 kB] 393s Get:152 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-intervals ppc64el 0.15.5-1 [603 kB] 394s Get:153 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-spacetime all 1.3-3-2 [2780 kB] 399s Get:154 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-stars all 0.7-0-1 [4415 kB] 407s Get:155 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-gstat ppc64el 2.1-3-2 [2361 kB] 411s Get:156 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mapdata ppc64el 2.3.1-1 [23.5 MB] 456s Get:157 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-terra ppc64el 1.8-70-1build2 [4456 kB] 465s Get:158 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-raster ppc64el 3.6-31-2 [3184 kB] 471s Preconfiguring packages ... 471s Fetched 172 MB in 5min 14s (548 kB/s) 471s Selecting previously unselected package fonts-dejavu-mono. 471s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122006 files and directories currently installed.) 471s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ... 471s Unpacking fonts-dejavu-mono (2.37-8build1) ... 471s Selecting previously unselected package fonts-dejavu-core. 471s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ... 471s Unpacking fonts-dejavu-core (2.37-8build1) ... 471s Selecting previously unselected package fontconfig-config. 471s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_ppc64el.deb ... 471s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 471s Selecting previously unselected package libfontconfig1:ppc64el. 471s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_ppc64el.deb ... 471s Unpacking libfontconfig1:ppc64el (2.17.1-3ubuntu1) ... 471s Selecting previously unselected package fontconfig. 471s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_ppc64el.deb ... 471s Unpacking fontconfig (2.17.1-3ubuntu1) ... 471s Selecting previously unselected package gdal-data. 471s Preparing to unpack .../005-gdal-data_3.12.1+dfsg-1_all.deb ... 471s Unpacking gdal-data (3.12.1+dfsg-1) ... 471s Selecting previously unselected package gdal-plugins:ppc64el. 471s Preparing to unpack .../006-gdal-plugins_3.12.1+dfsg-1_ppc64el.deb ... 471s Unpacking gdal-plugins:ppc64el (3.12.1+dfsg-1) ... 471s Selecting previously unselected package libabsl20260107:ppc64el. 471s Preparing to unpack .../007-libabsl20260107_20260107.0-1_ppc64el.deb ... 471s Unpacking libabsl20260107:ppc64el (20260107.0-1) ... 471s Selecting previously unselected package libaec0:ppc64el. 471s Preparing to unpack .../008-libaec0_1.1.5-1_ppc64el.deb ... 471s Unpacking libaec0:ppc64el (1.1.5-1) ... 471s Selecting previously unselected package libaom3:ppc64el. 471s Preparing to unpack .../009-libaom3_3.13.1-2_ppc64el.deb ... 471s Unpacking libaom3:ppc64el (3.13.1-2) ... 471s Selecting previously unselected package libblas3:ppc64el. 471s Preparing to unpack .../010-libblas3_3.12.1-7ubuntu1_ppc64el.deb ... 471s Unpacking libblas3:ppc64el (3.12.1-7ubuntu1) ... 471s Selecting previously unselected package libgfortran5:ppc64el. 471s Preparing to unpack .../011-libgfortran5_15.2.0-12ubuntu1_ppc64el.deb ... 471s Unpacking libgfortran5:ppc64el (15.2.0-12ubuntu1) ... 471s Selecting previously unselected package liblapack3:ppc64el. 471s Preparing to unpack .../012-liblapack3_3.12.1-7ubuntu1_ppc64el.deb ... 471s Unpacking liblapack3:ppc64el (3.12.1-7ubuntu1) ... 471s Selecting previously unselected package libarpack2t64:ppc64el. 471s Preparing to unpack .../013-libarpack2t64_3.9.1-6_ppc64el.deb ... 471s Unpacking libarpack2t64:ppc64el (3.9.1-6) ... 471s Selecting previously unselected package libsuperlu7:ppc64el. 471s Preparing to unpack .../014-libsuperlu7_7.0.1+dfsg1-2_ppc64el.deb ... 471s Unpacking libsuperlu7:ppc64el (7.0.1+dfsg1-2) ... 471s Selecting previously unselected package libarmadillo15. 471s Preparing to unpack .../015-libarmadillo15_1%3a15.2.1+dfsg-2_ppc64el.deb ... 471s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 471s Selecting previously unselected package libdav1d7:ppc64el. 471s Preparing to unpack .../016-libdav1d7_1.5.3-1_ppc64el.deb ... 471s Unpacking libdav1d7:ppc64el (1.5.3-1) ... 472s Selecting previously unselected package libgav1-2:ppc64el. 472s Preparing to unpack .../017-libgav1-2_0.20.0-2build1_ppc64el.deb ... 472s Unpacking libgav1-2:ppc64el (0.20.0-2build1) ... 472s Selecting previously unselected package libjpeg-turbo8:ppc64el. 472s Preparing to unpack .../018-libjpeg-turbo8_2.1.5-4ubuntu3_ppc64el.deb ... 472s Unpacking libjpeg-turbo8:ppc64el (2.1.5-4ubuntu3) ... 472s Selecting previously unselected package libjpeg8:ppc64el. 472s Preparing to unpack .../019-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 472s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 472s Selecting previously unselected package libyuv0:ppc64el. 472s Preparing to unpack .../020-libyuv0_0.0.1922.20260106-1_ppc64el.deb ... 472s Unpacking libyuv0:ppc64el (0.0.1922.20260106-1) ... 472s Selecting previously unselected package libavif16:ppc64el. 472s Preparing to unpack .../021-libavif16_1.3.0-1ubuntu3_ppc64el.deb ... 472s Unpacking libavif16:ppc64el (1.3.0-1ubuntu3) ... 472s Selecting previously unselected package libsnappy1v5:ppc64el. 472s Preparing to unpack .../022-libsnappy1v5_1.2.2-2_ppc64el.deb ... 472s Unpacking libsnappy1v5:ppc64el (1.2.2-2) ... 472s Selecting previously unselected package libblosc1:ppc64el. 472s Preparing to unpack .../023-libblosc1_1.21.5+ds-2_ppc64el.deb ... 472s Unpacking libblosc1:ppc64el (1.21.5+ds-2) ... 472s Selecting previously unselected package libpixman-1-0:ppc64el. 472s Preparing to unpack .../024-libpixman-1-0_0.46.4-1_ppc64el.deb ... 472s Unpacking libpixman-1-0:ppc64el (0.46.4-1) ... 472s Selecting previously unselected package libxcb-render0:ppc64el. 472s Preparing to unpack .../025-libxcb-render0_1.17.0-2ubuntu1_ppc64el.deb ... 472s Unpacking libxcb-render0:ppc64el (1.17.0-2ubuntu1) ... 472s Selecting previously unselected package libxcb-shm0:ppc64el. 472s Preparing to unpack .../026-libxcb-shm0_1.17.0-2ubuntu1_ppc64el.deb ... 472s Unpacking libxcb-shm0:ppc64el (1.17.0-2ubuntu1) ... 472s Selecting previously unselected package libxrender1:ppc64el. 472s Preparing to unpack .../027-libxrender1_1%3a0.9.12-1_ppc64el.deb ... 472s Unpacking libxrender1:ppc64el (1:0.9.12-1) ... 472s Selecting previously unselected package libcairo2:ppc64el. 472s Preparing to unpack .../028-libcairo2_1.18.4-3_ppc64el.deb ... 472s Unpacking libcairo2:ppc64el (1.18.4-3) ... 472s Selecting previously unselected package libcfitsio10t64:ppc64el. 472s Preparing to unpack .../029-libcfitsio10t64_4.6.3-1_ppc64el.deb ... 472s Unpacking libcfitsio10t64:ppc64el (4.6.3-1) ... 472s Selecting previously unselected package libdatrie1:ppc64el. 472s Preparing to unpack .../030-libdatrie1_0.2.14-1_ppc64el.deb ... 472s Unpacking libdatrie1:ppc64el (0.2.14-1) ... 472s Selecting previously unselected package libde265-0:ppc64el. 472s Preparing to unpack .../031-libde265-0_1.0.16-1build1_ppc64el.deb ... 472s Unpacking libde265-0:ppc64el (1.0.16-1build1) ... 472s Selecting previously unselected package libdeflate0:ppc64el. 472s Preparing to unpack .../032-libdeflate0_1.23-2build1_ppc64el.deb ... 472s Unpacking libdeflate0:ppc64el (1.23-2build1) ... 472s Selecting previously unselected package libfyba0t64:ppc64el. 472s Preparing to unpack .../033-libfyba0t64_4.1.1-11build2_ppc64el.deb ... 472s Unpacking libfyba0t64:ppc64el (4.1.1-11build2) ... 472s Selecting previously unselected package libminizip1t64:ppc64el. 472s Preparing to unpack .../034-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_ppc64el.deb ... 472s Unpacking libminizip1t64:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 472s Selecting previously unselected package libfreexl1:ppc64el. 472s Preparing to unpack .../035-libfreexl1_2.0.0-1build3_ppc64el.deb ... 472s Unpacking libfreexl1:ppc64el (2.0.0-1build3) ... 472s Selecting previously unselected package libgeos3.14.1:ppc64el. 472s Preparing to unpack .../036-libgeos3.14.1_3.14.1-2_ppc64el.deb ... 472s Unpacking libgeos3.14.1:ppc64el (3.14.1-2) ... 472s Selecting previously unselected package libgeos-c1t64:ppc64el. 472s Preparing to unpack .../037-libgeos-c1t64_3.14.1-2_ppc64el.deb ... 472s Unpacking libgeos-c1t64:ppc64el (3.14.1-2) ... 472s Selecting previously unselected package proj-data. 472s Preparing to unpack .../038-proj-data_9.7.1-1_all.deb ... 472s Unpacking proj-data (9.7.1-1) ... 472s Selecting previously unselected package libjbig0:ppc64el. 472s Preparing to unpack .../039-libjbig0_2.1-6.1ubuntu3_ppc64el.deb ... 472s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu3) ... 472s Selecting previously unselected package liblerc4:ppc64el. 472s Preparing to unpack .../040-liblerc4_4.0.0+ds-5ubuntu2_ppc64el.deb ... 472s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu2) ... 472s Selecting previously unselected package libsharpyuv0:ppc64el. 472s Preparing to unpack .../041-libsharpyuv0_1.5.0-0.1build1_ppc64el.deb ... 472s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1build1) ... 472s Selecting previously unselected package libwebp7:ppc64el. 472s Preparing to unpack .../042-libwebp7_1.5.0-0.1build1_ppc64el.deb ... 472s Unpacking libwebp7:ppc64el (1.5.0-0.1build1) ... 472s Selecting previously unselected package libtiff6:ppc64el. 472s Preparing to unpack .../043-libtiff6_4.7.0-3ubuntu3_ppc64el.deb ... 472s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu3) ... 472s Selecting previously unselected package libproj25:ppc64el. 472s Preparing to unpack .../044-libproj25_9.7.1-1_ppc64el.deb ... 472s Unpacking libproj25:ppc64el (9.7.1-1) ... 472s Selecting previously unselected package libgeotiff5:ppc64el. 472s Preparing to unpack .../045-libgeotiff5_1.7.4-1build1_ppc64el.deb ... 472s Unpacking libgeotiff5:ppc64el (1.7.4-1build1) ... 472s Selecting previously unselected package libgif7:ppc64el. 472s Preparing to unpack .../046-libgif7_5.2.2-1ubuntu3_ppc64el.deb ... 472s Unpacking libgif7:ppc64el (5.2.2-1ubuntu3) ... 472s Selecting previously unselected package libsz2:ppc64el. 472s Preparing to unpack .../047-libsz2_1.1.5-1_ppc64el.deb ... 472s Unpacking libsz2:ppc64el (1.1.5-1) ... 472s Selecting previously unselected package libhdf4-0:ppc64el. 472s Preparing to unpack .../048-libhdf4-0_4.3.1-2_ppc64el.deb ... 472s Unpacking libhdf4-0:ppc64el (4.3.1-2) ... 472s Selecting previously unselected package libhdf5-310:ppc64el. 472s Preparing to unpack .../049-libhdf5-310_1.14.6+repack-2_ppc64el.deb ... 472s Unpacking libhdf5-310:ppc64el (1.14.6+repack-2) ... 472s Selecting previously unselected package libheif-plugin-aomdec:ppc64el. 472s Preparing to unpack .../050-libheif-plugin-aomdec_1.21.2-1_ppc64el.deb ... 472s Unpacking libheif-plugin-aomdec:ppc64el (1.21.2-1) ... 472s Selecting previously unselected package libheif-plugin-libde265:ppc64el. 472s Preparing to unpack .../051-libheif-plugin-libde265_1.21.2-1_ppc64el.deb ... 472s Unpacking libheif-plugin-libde265:ppc64el (1.21.2-1) ... 472s Selecting previously unselected package libheif1:ppc64el. 472s Preparing to unpack .../052-libheif1_1.21.2-1_ppc64el.deb ... 472s Unpacking libheif1:ppc64el (1.21.2-1) ... 472s Selecting previously unselected package libhwy1t64:ppc64el. 472s Preparing to unpack .../053-libhwy1t64_1.3.0-2_ppc64el.deb ... 472s Unpacking libhwy1t64:ppc64el (1.3.0-2) ... 472s Selecting previously unselected package liblcms2-2:ppc64el. 472s Preparing to unpack .../054-liblcms2-2_2.17-1_ppc64el.deb ... 472s Unpacking liblcms2-2:ppc64el (2.17-1) ... 472s Selecting previously unselected package libjxl0.11:ppc64el. 472s Preparing to unpack .../055-libjxl0.11_0.11.1-6ubuntu1_ppc64el.deb ... 472s Unpacking libjxl0.11:ppc64el (0.11.1-6ubuntu1) ... 472s Selecting previously unselected package liburiparser1:ppc64el. 472s Preparing to unpack .../056-liburiparser1_0.9.8+dfsg-2_ppc64el.deb ... 472s Unpacking liburiparser1:ppc64el (0.9.8+dfsg-2) ... 472s Selecting previously unselected package libkmlbase1t64:ppc64el. 472s Preparing to unpack .../057-libkmlbase1t64_1.3.0-13_ppc64el.deb ... 472s Unpacking libkmlbase1t64:ppc64el (1.3.0-13) ... 472s Selecting previously unselected package libkmldom1t64:ppc64el. 472s Preparing to unpack .../058-libkmldom1t64_1.3.0-13_ppc64el.deb ... 472s Unpacking libkmldom1t64:ppc64el (1.3.0-13) ... 472s Selecting previously unselected package libkmlengine1t64:ppc64el. 472s Preparing to unpack .../059-libkmlengine1t64_1.3.0-13_ppc64el.deb ... 472s Unpacking libkmlengine1t64:ppc64el (1.3.0-13) ... 472s Selecting previously unselected package libgomp1:ppc64el. 472s Preparing to unpack .../060-libgomp1_15.2.0-12ubuntu1_ppc64el.deb ... 472s Unpacking libgomp1:ppc64el (15.2.0-12ubuntu1) ... 472s Selecting previously unselected package libmuparser2v5:ppc64el. 472s Preparing to unpack .../061-libmuparser2v5_2.3.4-2_ppc64el.deb ... 472s Unpacking libmuparser2v5:ppc64el (2.3.4-2) ... 472s Selecting previously unselected package mysql-common. 472s Preparing to unpack .../062-mysql-common_5.8+1.1.1ubuntu2_all.deb ... 472s Unpacking mysql-common (5.8+1.1.1ubuntu2) ... 472s Selecting previously unselected package libmysqlclient24:ppc64el. 472s Preparing to unpack .../063-libmysqlclient24_8.4.8-0ubuntu1_ppc64el.deb ... 472s Unpacking libmysqlclient24:ppc64el (8.4.8-0ubuntu1) ... 472s Selecting previously unselected package libhdf5-hl-310:ppc64el. 472s Preparing to unpack .../064-libhdf5-hl-310_1.14.6+repack-2_ppc64el.deb ... 472s Unpacking libhdf5-hl-310:ppc64el (1.14.6+repack-2) ... 473s Selecting previously unselected package libnetcdf22:ppc64el. 473s Preparing to unpack .../065-libnetcdf22_1%3a4.9.3-1build1_ppc64el.deb ... 473s Unpacking libnetcdf22:ppc64el (1:4.9.3-1build1) ... 473s Selecting previously unselected package libltdl7:ppc64el. 473s Preparing to unpack .../066-libltdl7_2.5.4-9_ppc64el.deb ... 473s Unpacking libltdl7:ppc64el (2.5.4-9) ... 473s Selecting previously unselected package libodbc2:ppc64el. 473s Preparing to unpack .../067-libodbc2_2.3.14-1_ppc64el.deb ... 473s Unpacking libodbc2:ppc64el (2.3.14-1) ... 473s Selecting previously unselected package unixodbc-common. 473s Preparing to unpack .../068-unixodbc-common_2.3.14-1_all.deb ... 473s Unpacking unixodbc-common (2.3.14-1) ... 473s Selecting previously unselected package libodbcinst2:ppc64el. 473s Preparing to unpack .../069-libodbcinst2_2.3.14-1_ppc64el.deb ... 473s Unpacking libodbcinst2:ppc64el (2.3.14-1) ... 473s Selecting previously unselected package libopenjp2-7:ppc64el. 473s Preparing to unpack .../070-libopenjp2-7_2.5.4-1_ppc64el.deb ... 473s Unpacking libopenjp2-7:ppc64el (2.5.4-1) ... 473s Selecting previously unselected package libgpgmepp6t64:ppc64el. 473s Preparing to unpack .../071-libgpgmepp6t64_1.24.2-3ubuntu2_ppc64el.deb ... 473s Unpacking libgpgmepp6t64:ppc64el (1.24.2-3ubuntu2) ... 473s Selecting previously unselected package libpoppler147:ppc64el. 473s Preparing to unpack .../072-libpoppler147_25.03.0-11.1_ppc64el.deb ... 473s Unpacking libpoppler147:ppc64el (25.03.0-11.1) ... 473s Selecting previously unselected package libpq5:ppc64el. 473s Preparing to unpack .../073-libpq5_18.1-2_ppc64el.deb ... 473s Unpacking libpq5:ppc64el (18.1-2) ... 473s Selecting previously unselected package libqhull-r8.0:ppc64el. 473s Preparing to unpack .../074-libqhull-r8.0_2020.2-8_ppc64el.deb ... 473s Unpacking libqhull-r8.0:ppc64el (2020.2-8) ... 473s Selecting previously unselected package librttopo1:ppc64el. 473s Preparing to unpack .../075-librttopo1_1.1.0-4build1_ppc64el.deb ... 473s Unpacking librttopo1:ppc64el (1.1.0-4build1) ... 473s Selecting previously unselected package libspatialite8t64:ppc64el. 473s Preparing to unpack .../076-libspatialite8t64_5.1.0-3ubuntu1_ppc64el.deb ... 473s Unpacking libspatialite8t64:ppc64el (5.1.0-3ubuntu1) ... 473s Selecting previously unselected package libxerces-c3.2t64:ppc64el. 473s Preparing to unpack .../077-libxerces-c3.2t64_3.2.4+debian-1.3build2_ppc64el.deb ... 473s Unpacking libxerces-c3.2t64:ppc64el (3.2.4+debian-1.3build2) ... 473s Selecting previously unselected package libgdal38:ppc64el. 473s Preparing to unpack .../078-libgdal38_3.12.1+dfsg-1_ppc64el.deb ... 473s Unpacking libgdal38:ppc64el (3.12.1+dfsg-1) ... 473s Selecting previously unselected package libgraphite2-3:ppc64el. 473s Preparing to unpack .../079-libgraphite2-3_1.3.14-11ubuntu1_ppc64el.deb ... 473s Unpacking libgraphite2-3:ppc64el (1.3.14-11ubuntu1) ... 473s Selecting previously unselected package libharfbuzz0b:ppc64el. 473s Preparing to unpack .../080-libharfbuzz0b_12.3.2-1_ppc64el.deb ... 473s Unpacking libharfbuzz0b:ppc64el (12.3.2-1) ... 473s Selecting previously unselected package x11-common. 473s Preparing to unpack .../081-x11-common_1%3a7.7+24ubuntu1_all.deb ... 473s Unpacking x11-common (1:7.7+24ubuntu1) ... 473s Selecting previously unselected package libice6:ppc64el. 473s Preparing to unpack .../082-libice6_2%3a1.1.1-1build1_ppc64el.deb ... 473s Unpacking libice6:ppc64el (2:1.1.1-1build1) ... 473s Selecting previously unselected package libthai-data. 473s Preparing to unpack .../083-libthai-data_0.1.30-1_all.deb ... 473s Unpacking libthai-data (0.1.30-1) ... 473s Selecting previously unselected package libthai0:ppc64el. 473s Preparing to unpack .../084-libthai0_0.1.30-1_ppc64el.deb ... 473s Unpacking libthai0:ppc64el (0.1.30-1) ... 473s Selecting previously unselected package libpango-1.0-0:ppc64el. 473s Preparing to unpack .../085-libpango-1.0-0_1.57.0-1_ppc64el.deb ... 473s Unpacking libpango-1.0-0:ppc64el (1.57.0-1) ... 473s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 473s Preparing to unpack .../086-libpangoft2-1.0-0_1.57.0-1_ppc64el.deb ... 473s Unpacking libpangoft2-1.0-0:ppc64el (1.57.0-1) ... 473s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 473s Preparing to unpack .../087-libpangocairo-1.0-0_1.57.0-1_ppc64el.deb ... 473s Unpacking libpangocairo-1.0-0:ppc64el (1.57.0-1) ... 473s Selecting previously unselected package libpaper2:ppc64el. 473s Preparing to unpack .../088-libpaper2_2.2.5-0.3build1_ppc64el.deb ... 473s Unpacking libpaper2:ppc64el (2.2.5-0.3build1) ... 473s Selecting previously unselected package libpaper-utils. 473s Preparing to unpack .../089-libpaper-utils_2.2.5-0.3build1_ppc64el.deb ... 473s Unpacking libpaper-utils (2.2.5-0.3build1) ... 473s Selecting previously unselected package libsm6:ppc64el. 473s Preparing to unpack .../090-libsm6_2%3a1.2.6-1build1_ppc64el.deb ... 473s Unpacking libsm6:ppc64el (2:1.2.6-1build1) ... 473s Selecting previously unselected package libtcl8.6:ppc64el. 473s Preparing to unpack .../091-libtcl8.6_8.6.17+dfsg-1build1_ppc64el.deb ... 473s Unpacking libtcl8.6:ppc64el (8.6.17+dfsg-1build1) ... 473s Selecting previously unselected package libxft2:ppc64el. 473s Preparing to unpack .../092-libxft2_2.3.6-1build2_ppc64el.deb ... 473s Unpacking libxft2:ppc64el (2.3.6-1build2) ... 473s Selecting previously unselected package libxss1:ppc64el. 473s Preparing to unpack .../093-libxss1_1%3a1.2.3-1build4_ppc64el.deb ... 473s Unpacking libxss1:ppc64el (1:1.2.3-1build4) ... 473s Selecting previously unselected package libtk8.6:ppc64el. 473s Preparing to unpack .../094-libtk8.6_8.6.17-1_ppc64el.deb ... 473s Unpacking libtk8.6:ppc64el (8.6.17-1) ... 473s Selecting previously unselected package libudunits2-data. 473s Preparing to unpack .../095-libudunits2-data_2.2.28-8_all.deb ... 473s Unpacking libudunits2-data (2.2.28-8) ... 473s Selecting previously unselected package libudunits2-0:ppc64el. 473s Preparing to unpack .../096-libudunits2-0_2.2.28-8_ppc64el.deb ... 473s Unpacking libudunits2-0:ppc64el (2.2.28-8) ... 473s Selecting previously unselected package libxt6t64:ppc64el. 473s Preparing to unpack .../097-libxt6t64_1%3a1.2.1-1.3_ppc64el.deb ... 473s Unpacking libxt6t64:ppc64el (1:1.2.1-1.3) ... 473s Selecting previously unselected package zip. 473s Preparing to unpack .../098-zip_3.0-15ubuntu3_ppc64el.deb ... 473s Unpacking zip (3.0-15ubuntu3) ... 473s Selecting previously unselected package unzip. 473s Preparing to unpack .../099-unzip_6.0-29ubuntu1_ppc64el.deb ... 473s Unpacking unzip (6.0-29ubuntu1) ... 473s Selecting previously unselected package xdg-utils. 473s Preparing to unpack .../100-xdg-utils_1.2.1-2ubuntu2_all.deb ... 473s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 473s Selecting previously unselected package r-base-core. 473s Preparing to unpack .../101-r-base-core_4.5.2-1ubuntu2_ppc64el.deb ... 473s Unpacking r-base-core (4.5.2-1ubuntu2) ... 474s Selecting previously unselected package r-cran-abind. 474s Preparing to unpack .../102-r-cran-abind_1.4-8-1build1_all.deb ... 474s Unpacking r-cran-abind (1.4-8-1build1) ... 474s Selecting previously unselected package r-cran-mass. 474s Preparing to unpack .../103-r-cran-mass_7.3-65-1_ppc64el.deb ... 474s Unpacking r-cran-mass (7.3-65-1) ... 474s Selecting previously unselected package r-cran-class. 474s Preparing to unpack .../104-r-cran-class_7.3-23-1_ppc64el.deb ... 474s Unpacking r-cran-class (7.3-23-1) ... 474s Selecting previously unselected package r-cran-proxy. 474s Preparing to unpack .../105-r-cran-proxy_0.4-27-1_ppc64el.deb ... 474s Unpacking r-cran-proxy (0.4-27-1) ... 474s Selecting previously unselected package r-cran-e1071. 474s Preparing to unpack .../106-r-cran-e1071_1.7-17-1_ppc64el.deb ... 474s Unpacking r-cran-e1071 (1.7-17-1) ... 474s Selecting previously unselected package r-cran-kernsmooth. 474s Preparing to unpack .../107-r-cran-kernsmooth_2.23-26-1build1_ppc64el.deb ... 474s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 474s Selecting previously unselected package r-cran-classint. 474s Preparing to unpack .../108-r-cran-classint_0.4-11+dfsg-1_ppc64el.deb ... 474s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 474s Selecting previously unselected package r-cran-cli. 474s Preparing to unpack .../109-r-cran-cli_3.6.4-1_ppc64el.deb ... 474s Unpacking r-cran-cli (3.6.4-1) ... 474s Selecting previously unselected package r-cran-codetools. 474s Preparing to unpack .../110-r-cran-codetools_0.2-20-1build1_all.deb ... 474s Unpacking r-cran-codetools (0.2-20-1build1) ... 474s Selecting previously unselected package r-cran-dbi. 474s Preparing to unpack .../111-r-cran-dbi_1.2.3-1build1_all.deb ... 474s Unpacking r-cran-dbi (1.2.3-1build1) ... 474s Selecting previously unselected package r-cran-digest. 474s Preparing to unpack .../112-r-cran-digest_0.6.39-1_ppc64el.deb ... 474s Unpacking r-cran-digest (0.6.39-1) ... 474s Selecting previously unselected package r-cran-dotcall64. 474s Preparing to unpack .../113-r-cran-dotcall64_1.2-1_ppc64el.deb ... 474s Unpacking r-cran-dotcall64 (1.2-1) ... 474s Selecting previously unselected package r-cran-farver. 474s Preparing to unpack .../114-r-cran-farver_2.1.2-1_ppc64el.deb ... 474s Unpacking r-cran-farver (2.1.2-1) ... 474s Selecting previously unselected package r-cran-littler. 474s Preparing to unpack .../115-r-cran-littler_0.3.22-1_ppc64el.deb ... 474s Unpacking r-cran-littler (0.3.22-1) ... 474s Selecting previously unselected package r-cran-pkgkitten. 474s Preparing to unpack .../116-r-cran-pkgkitten_0.2.4-1_all.deb ... 474s Unpacking r-cran-pkgkitten (0.2.4-1) ... 474s Selecting previously unselected package r-cran-rcpp. 474s Preparing to unpack .../117-r-cran-rcpp_1.1.0-1_ppc64el.deb ... 474s Unpacking r-cran-rcpp (1.1.0-1) ... 474s Selecting previously unselected package r-cran-spam. 474s Preparing to unpack .../118-r-cran-spam_2.11-1-1_ppc64el.deb ... 474s Unpacking r-cran-spam (2.11-1-1) ... 474s Selecting previously unselected package r-cran-viridislite. 474s Preparing to unpack .../119-r-cran-viridislite_0.4.3-1_all.deb ... 474s Unpacking r-cran-viridislite (0.4.3-1) ... 474s Selecting previously unselected package r-cran-maps. 474s Preparing to unpack .../120-r-cran-maps_3.4.2.1-1_ppc64el.deb ... 474s Unpacking r-cran-maps (3.4.2.1-1) ... 474s Selecting previously unselected package r-cran-fields. 474s Preparing to unpack .../121-r-cran-fields_16.3.1-1_ppc64el.deb ... 474s Unpacking r-cran-fields (16.3.1-1) ... 474s Selecting previously unselected package r-cran-fnn. 474s Preparing to unpack .../122-r-cran-fnn_1.1.4.1-1_ppc64el.deb ... 474s Unpacking r-cran-fnn (1.1.4.1-1) ... 474s Selecting previously unselected package r-cran-globals. 474s Preparing to unpack .../123-r-cran-globals_0.19.0-1_all.deb ... 474s Unpacking r-cran-globals (0.19.0-1) ... 474s Selecting previously unselected package r-cran-listenv. 474s Preparing to unpack .../124-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 474s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 474s Selecting previously unselected package r-cran-parallelly. 474s Preparing to unpack .../125-r-cran-parallelly_1.42.0-1_ppc64el.deb ... 474s Unpacking r-cran-parallelly (1.42.0-1) ... 475s Selecting previously unselected package r-cran-future. 475s Preparing to unpack .../126-r-cran-future_1.34.0+dfsg-1_all.deb ... 475s Unpacking r-cran-future (1.34.0+dfsg-1) ... 475s Selecting previously unselected package r-cran-future.apply. 475s Preparing to unpack .../127-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 475s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 475s Selecting previously unselected package r-cran-glue. 475s Preparing to unpack .../128-r-cran-glue_1.8.0-1_ppc64el.deb ... 475s Unpacking r-cran-glue (1.8.0-1) ... 475s Selecting previously unselected package r-cran-rlang. 475s Preparing to unpack .../129-r-cran-rlang_1.1.5-3_ppc64el.deb ... 475s Unpacking r-cran-rlang (1.1.5-3) ... 475s Selecting previously unselected package r-cran-lifecycle. 475s Preparing to unpack .../130-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 475s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 475s Selecting previously unselected package r-cran-gtable. 475s Preparing to unpack .../131-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 475s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 475s Selecting previously unselected package r-cran-isoband. 475s Preparing to unpack .../132-r-cran-isoband_0.2.7-1_ppc64el.deb ... 475s Unpacking r-cran-isoband (0.2.7-1) ... 475s Selecting previously unselected package r-cran-s7. 475s Preparing to unpack .../133-r-cran-s7_0.2.0-1_ppc64el.deb ... 475s Unpacking r-cran-s7 (0.2.0-1) ... 475s Selecting previously unselected package r-cran-labeling. 475s Preparing to unpack .../134-r-cran-labeling_0.4.3-1_all.deb ... 475s Unpacking r-cran-labeling (0.4.3-1) ... 475s Selecting previously unselected package r-cran-r6. 475s Preparing to unpack .../135-r-cran-r6_2.6.1-1_all.deb ... 475s Unpacking r-cran-r6 (2.6.1-1) ... 475s Selecting previously unselected package r-cran-rcolorbrewer. 475s Preparing to unpack .../136-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 475s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 475s Selecting previously unselected package r-cran-scales. 475s Preparing to unpack .../137-r-cran-scales_1.4.0-1_all.deb ... 475s Unpacking r-cran-scales (1.4.0-1) ... 475s Selecting previously unselected package r-cran-vctrs. 475s Preparing to unpack .../138-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 475s Unpacking r-cran-vctrs (0.6.5-1) ... 475s Selecting previously unselected package r-cran-withr. 475s Preparing to unpack .../139-r-cran-withr_3.0.2+dfsg-1_all.deb ... 475s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 475s Selecting previously unselected package r-cran-ggplot2. 475s Preparing to unpack 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triggers for libc-bin (2.42-2ubuntu4) ... 479s Processing triggers for man-db (2.13.1-1build1) ... 480s autopkgtest [23:33:41]: test run-unit-test: [----------------------- 481s BEGIN TEST allier.R 481s 481s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 481s Copyright (C) 2025 The R Foundation for Statistical Computing 481s Platform: powerpc64le-unknown-linux-gnu 481s 481s R is free software and comes with ABSOLUTELY NO WARRANTY. 481s You are welcome to redistribute it under certain conditions. 481s Type 'license()' or 'licence()' for distribution details. 481s 481s R is a collaborative project with many contributors. 481s Type 'contributors()' for more information and 481s 'citation()' on how to cite R or R packages in publications. 481s 481s Type 'demo()' for some demos, 'help()' for on-line help, or 481s 'help.start()' for an HTML browser interface to help. 481s Type 'q()' to quit R. 481s 481s > # Sytze de Bruin's post to r-sig-geo, Nov 16, 2015: 481s > library(sp) 481s > library(gstat) 481s > 481s > # some data 481s > x <- c(215, 330, 410, 470, 545) 481s > y <- c(230, 310, 330, 340, 365) 481s > fc <- c(0.211, 0.251, 0.281, 0.262, 0.242) 481s > por <- c(0.438, 0.457, 0.419, 0.430, 0.468) 481s > Allier <- data.frame(x, y, fc, por) 481s > coordinates(Allier) = ~x+y 481s > 481s > # gstat object for co-kriging using linear model of co-regionalization 481s > g <- gstat(id=c("fc"), formula=fc~1, data=Allier, 481s + model=vgm(0.00247, "Sph", 480, 0.00166)) 481s > g <- gstat(g, id="por", formula=por~1, data=Allier, 481s + model=vgm(0.00239, "Sph", 480, 0.00118)) 481s > g <- gstat(g, id=c("fc", "por"), 481s + model=vgm(0.00151, "Sph", 480, -0.00124)) 481s > 481s > # predict at single point 481s > g$set = list(choleski = 0) # LDL' 481s > A <- predict(g, SpatialPoints(data.frame(x=450, y=350)), debug = 32) 481s Linear Model of Coregionalization found. Good. 481s [using ordinary cokriging] 481s we're at location X: 450 Y: 350 Z: 0 481s zero block size 481s we're at point X: 450 Y: 350 Z: 0 481s 481s # X: 481s #Matrix: 10 by 2 481s rbind( 481s c( 1.000000, 0.000000), # row 1 481s c( 1.000000, 0.000000), # row 2 481s c( 1.000000, 0.000000), # row 3 481s c( 1.000000, 0.000000), # row 4 481s c( 1.000000, 0.000000), # row 5 481s c( 0.000000, 1.000000), # row 6 481s c( 0.000000, 1.000000), # row 7 481s c( 0.000000, 1.000000), # row 8 481s c( 0.000000, 1.000000), # row 9 481s c( 0.000000, 1.000000) # row 10 481s ) 481s [using generalized covariances: max_val - semivariance()] 481s # Covariances (x_i, x_j) matrix C (upper triangle): 481s #Matrix: 10 by 10 481s rbind( 481s c( 0.004130, 0.001419, 0.000896, 0.000566, 0.000224, 0.000270, 0.000868, 0.000548, 0.000346, 0.000137), # row 1 481s c( 0.001419, 0.004130, 0.001840, 0.001398, 0.000879, 0.000868, 0.000270, 0.001125, 0.000854, 0.000537), # row 2 481s c( 0.000896, 0.001840, 0.004130, 0.002003, 0.001424, 0.000548, 0.001125, 0.000270, 0.001225, 0.000870), # row 3 481s c( 0.000566, 0.001398, 0.002003, 0.004130, 0.001865, 0.000346, 0.000854, 0.001225, 0.000270, 0.001140), # row 4 481s c( 0.000224, 0.000879, 0.001424, 0.001865, 0.004130, 0.000137, 0.000537, 0.000870, 0.001140, 0.000270), # row 5 481s c( 0.000270, 0.000868, 0.000548, 0.000346, 0.000137, 0.003570, 0.001373, 0.000867, 0.000547, 0.000217), # row 6 481s c( 0.000868, 0.000270, 0.001125, 0.000854, 0.000537, 0.001373, 0.003570, 0.001780, 0.001352, 0.000851), # row 7 481s c( 0.000548, 0.001125, 0.000270, 0.001225, 0.000870, 0.000867, 0.001780, 0.003570, 0.001938, 0.001378), # row 8 481s c( 0.000346, 0.000854, 0.001225, 0.000270, 0.001140, 0.000547, 0.001352, 0.001938, 0.003570, 0.001805), # row 9 481s c( 0.000137, 0.000537, 0.000870, 0.001140, 0.000270, 0.000217, 0.000851, 0.001378, 0.001805, 0.003570) # row 10 481s ) 481s 481s # glm->C, LDL' decomposed:: 481s #Matrix: 10 by 10 481s rbind( 481s c( 0.003399, 0.372269, 0.208612, 0.127967, 0.016746, -0.025847, 0.223862, 0.148767, 0.104047, 0.038371), # row 1 481s c( 0.000000, 0.002661, 0.483725, 0.327484, 0.153742, 0.233021, -0.125118, 0.262410, 0.219271, 0.150536), # row 2 481s c( 0.000000, 0.000000, 0.002276, 0.540203, 0.303585, 0.058071, 0.314376, -0.175899, 0.295181, 0.243817), # row 3 481s c( 0.000000, 0.000000, 0.000000, 0.002484, 0.483068, 0.000301, 0.115816, 0.377362, -0.115338, 0.319418), # row 4 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.003690, -0.038142, 0.000474, 0.120915, 0.377730, 0.075630), # row 5 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.003019, 0.354325, 0.235465, 0.164684, 0.060733), # row 6 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.002623, 0.415337, 0.347059, 0.238266), # row 7 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.002458, 0.467207, 0.385909), # row 8 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.002658, 0.505569), # row 9 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.003570) # row 10 481s ) 481s 481s # X'C-1 X: 481s #Matrix: 2 by 2 481s rbind( 481s c(665.433994, -232.313340), # row 1 481s c(-232.313340, 729.440848) # row 2 481s ) 481s 481s # beta: 481s #Vector: dim: 2 481s c( 0.244216, 0.440933) 481s # Cov(beta), (X'C-1 X)-1: 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.001691, 0.000538), # row 1 481s c( 0.000538, 0.001542) # row 2 481s ) 481s 481s # Corr(beta): 481s #Matrix: 2 by 2 481s rbind( 481s c( 1.000000, 0.333447), # row 1 481s c( 0.333447, 1.000000) # row 2 481s ) 481s 481s # X0 (X values at prediction location x0): 481s #Matrix: 2 by 2 481s rbind( 481s c( 1.000000, 0.000000), # row 1 481s c( 0.000000, 1.000000) # row 2 481s ) 481s 481s # BLUE(mu), E(y(x0)) = X0'beta: 481s #Vector: dim: 2 481s c( 0.244216, 0.440933) 481s # Covariances (x_i, x_0), C0: 481s #Matrix: 10 by 2 481s rbind( 481s c( 0.000638, 0.000390), # row 1 481s c( 0.001516, 0.000927), # row 2 481s c( 0.002126, 0.001300), # row 3 481s c( 0.002298, 0.001405), # row 4 481s c( 0.001738, 0.001062), # row 5 481s c( 0.000390, 0.000618), # row 6 481s c( 0.000927, 0.001467), # row 7 481s c( 0.001300, 0.002057), # row 8 481s c( 0.001405, 0.002223), # row 9 481s c( 0.001062, 0.001681) # row 10 481s ) 481s 481s # C-1 C0: 481s #Matrix: 10 by 2 481s rbind( 481s c( 0.008927, -0.017995), # row 1 481s c( 0.061935, -0.028550), # row 2 481s c( 0.225195, 0.078344), # row 3 481s c( 0.356735, 0.190177), # row 4 481s c( 0.094128, -0.023136), # row 5 481s c(-0.021119, 0.004935), # row 6 481s c(-0.033508, 0.055601), # row 7 481s c( 0.091947, 0.242576), # row 8 481s c( 0.223200, 0.398927), # row 9 481s c(-0.027153, 0.088995) # row 10 481s ) 481s 481s # [a] Cov_ij(B,B) or Cov_ij(0,0): 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.004130, 0.000270), # row 1 481s c( 0.000270, 0.003570) # row 2 481s ) 481s 481s # [c] (x0-X'C-1 c0)'(X'C-1 X)-1(x0-X'C-1 c0): 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.000129, -0.000107), # row 1 481s c(-0.000107, 0.000089) # row 2 481s ) 481s 481s # [b] c0'C-1 c0: 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.001926, 0.001532), # row 1 481s c( 0.001532, 0.001931) # row 2 481s ) 481s 481s # Best Linear Unbiased Predictor: 481s #Vector: dim: 2 481s c( 0.253090, 0.441258) 481s # MSPE ([a]-[b]+[c]): 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.002332, -0.001369), # row 1 481s c(-0.001369, 0.001729) # row 2 481s ) 481s 481s # kriging weights: 481s #Matrix: 10 by 2 481s rbind( 481s c( 0.071177, -0.064988), # row 1 481s c( 0.108451, -0.066123), # row 2 481s c( 0.268160, 0.043141), # row 3 481s c( 0.401959, 0.153312), # row 4 481s c( 0.150253, -0.065342), # row 5 481s c(-0.076273, 0.056759), # row 6 481s c(-0.077605, 0.093781), # row 7 481s c( 0.050632, 0.277731), # row 8 481s c( 0.179933, 0.435972), # row 9 481s c(-0.076688, 0.135756) # row 10 481s ) 481s 481s 481s > g$set = list(choleski = 1) # Choleski 481s > B <- predict(g, SpatialPoints(data.frame(x=450, y=350)), debug = 32) 481s Linear Model of Coregionalization found. Good. 481s [using ordinary cokriging] 481s we're at location X: 450 Y: 350 Z: 0 481s zero block size 481s we're at point X: 450 Y: 350 Z: 0 481s 481s # X: 481s #Matrix: 10 by 2 481s rbind( 481s c( 1.000000, 0.000000), # row 1 481s c( 1.000000, 0.000000), # row 2 481s c( 1.000000, 0.000000), # row 3 481s c( 1.000000, 0.000000), # row 4 481s c( 1.000000, 0.000000), # row 5 481s c( 0.000000, 1.000000), # row 6 481s c( 0.000000, 1.000000), # row 7 481s c( 0.000000, 1.000000), # row 8 481s c( 0.000000, 1.000000), # row 9 481s c( 0.000000, 1.000000) # row 10 481s ) 481s [using generalized covariances: max_val - semivariance()] 481s # Covariances (x_i, x_j) matrix C (upper triangle): 481s #Matrix: 10 by 10 481s rbind( 481s c( 0.004130, 0.001419, 0.000896, 0.000566, 0.000224, 0.000270, 0.000868, 0.000548, 0.000346, 0.000137), # row 1 481s c( 0.001419, 0.004130, 0.001840, 0.001398, 0.000879, 0.000868, 0.000270, 0.001125, 0.000854, 0.000537), # row 2 481s c( 0.000896, 0.001840, 0.004130, 0.002003, 0.001424, 0.000548, 0.001125, 0.000270, 0.001225, 0.000870), # row 3 481s c( 0.000566, 0.001398, 0.002003, 0.004130, 0.001865, 0.000346, 0.000854, 0.001225, 0.000270, 0.001140), # row 4 481s c( 0.000224, 0.000879, 0.001424, 0.001865, 0.004130, 0.000137, 0.000537, 0.000870, 0.001140, 0.000270), # row 5 481s c( 0.000270, 0.000868, 0.000548, 0.000346, 0.000137, 0.003570, 0.001373, 0.000867, 0.000547, 0.000217), # row 6 481s c( 0.000868, 0.000270, 0.001125, 0.000854, 0.000537, 0.001373, 0.003570, 0.001780, 0.001352, 0.000851), # row 7 481s c( 0.000548, 0.001125, 0.000270, 0.001225, 0.000870, 0.000867, 0.001780, 0.003570, 0.001938, 0.001378), # row 8 481s c( 0.000346, 0.000854, 0.001225, 0.000270, 0.001140, 0.000547, 0.001352, 0.001938, 0.003570, 0.001805), # row 9 481s c( 0.000137, 0.000537, 0.000870, 0.001140, 0.000270, 0.000217, 0.000851, 0.001378, 0.001805, 0.003570) # row 10 481s ) 481s 481s # glm->C, Choleski decomposed:: 481s #Matrix: 10 by 10 481s rbind( 481s c( 0.064265, 0.022086, 0.013942, 0.008801, 0.003487, 0.004201, 0.013502, 0.008523, 0.005380, 0.002132), # row 1 481s c( 0.000000, 0.060351, 0.025382, 0.019938, 0.013290, 0.012840, -0.000468, 0.015517, 0.012189, 0.008125), # row 2 481s c( 0.000000, 0.000000, 0.057370, 0.023954, 0.018091, 0.002846, 0.016530, -0.004230, 0.014644, 0.011059), # row 3 481s c( 0.000000, 0.000000, 0.000000, 0.055509, 0.020471, -0.000277, 0.006286, 0.016960, -0.006686, 0.012514), # row 4 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.056523, -0.001665, 0.001218, 0.006437, 0.014711, -0.005337), # row 5 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.058108, 0.022018, 0.011347, 0.006008, 0.001147), # row 6 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.050877, 0.027084, 0.018381, 0.010720), # row 7 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.045247, 0.026914, 0.017658), # row 8 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.042645, 0.023811), # row 9 481s c( 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.046872) # row 10 481s ) 481s 481s # X'C-1 X: 481s #Matrix: 2 by 2 481s rbind( 481s c(665.433994, -232.313340), # row 1 481s c(-232.313340, 729.440848) # row 2 481s ) 481s 481s # beta: 481s #Vector: dim: 2 481s c( 0.244216, 0.440933) 481s # Cov(beta), (X'C-1 X)-1: 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.001691, 0.000538), # row 1 481s c( 0.000538, 0.001542) # row 2 481s ) 481s 481s # Corr(beta): 481s #Matrix: 2 by 2 481s rbind( 481s c( 1.000000, 0.333447), # row 1 481s c( 0.333447, 1.000000) # row 2 481s ) 481s 481s # X0 (X values at prediction location x0): 481s #Matrix: 2 by 2 481s rbind( 481s c( 1.000000, 0.000000), # row 1 481s c( 0.000000, 1.000000) # row 2 481s ) 481s 481s # BLUE(mu), E(y(x0)) = X0'beta: 481s #Vector: dim: 2 481s c( 0.244216, 0.440933) 481s # Covariances (x_i, x_0), C0: 481s #Matrix: 10 by 2 481s rbind( 481s c( 0.000638, 0.000390), # row 1 481s c( 0.001516, 0.000927), # row 2 481s c( 0.002126, 0.001300), # row 3 481s c( 0.002298, 0.001405), # row 4 481s c( 0.001738, 0.001062), # row 5 481s c( 0.000390, 0.000618), # row 6 481s c( 0.000927, 0.001467), # row 7 481s c( 0.001300, 0.002057), # row 8 481s c( 0.001405, 0.002223), # row 9 481s c( 0.001062, 0.001681) # row 10 481s ) 481s 481s # C-1 C0: 481s #Matrix: 10 by 2 481s rbind( 481s c( 0.008927, -0.017995), # row 1 481s c( 0.061935, -0.028550), # row 2 481s c( 0.225195, 0.078344), # row 3 481s c( 0.356735, 0.190177), # row 4 481s c( 0.094128, -0.023136), # row 5 481s c(-0.021119, 0.004935), # row 6 481s c(-0.033508, 0.055601), # row 7 481s c( 0.091947, 0.242576), # row 8 481s c( 0.223200, 0.398927), # row 9 481s c(-0.027153, 0.088995) # row 10 481s ) 481s 481s # [a] Cov_ij(B,B) or Cov_ij(0,0): 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.004130, 0.000270), # row 1 481s c( 0.000270, 0.003570) # row 2 481s ) 481s 481s # [c] (x0-X'C-1 c0)'(X'C-1 X)-1(x0-X'C-1 c0): 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.000129, -0.000107), # row 1 481s c(-0.000107, 0.000089) # row 2 481s ) 481s 481s # [b] c0'C-1 c0: 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.001926, 0.001532), # row 1 481s c( 0.001532, 0.001931) # row 2 481s ) 481s 481s # Best Linear Unbiased Predictor: 481s #Vector: dim: 2 481s c( 0.253090, 0.441258) 481s # MSPE ([a]-[b]+[c]): 481s #Matrix: 2 by 2 481s rbind( 481s c( 0.002332, -0.001369), # row 1 481s c(-0.001369, 0.001729) # row 2 481s ) 481s 481s # kriging weights: 481s #Matrix: 10 by 2 481s rbind( 481s c( 0.071177, -0.064988), # row 1 481s c( 0.108451, -0.066123), # row 2 481s c( 0.268160, 0.043141), # row 3 481s c( 0.401959, 0.153312), # row 4 481s c( 0.150253, -0.065342), # row 5 481s c(-0.076273, 0.056759), # row 6 481s c(-0.077605, 0.093781), # row 7 481s c( 0.050632, 0.277731), # row 8 481s c( 0.179933, 0.435972), # row 9 481s c(-0.076688, 0.135756) # row 10 481s ) 481s 481s 481s > all.equal(A,B) 481s [1] TRUE 481s > 481s > # TRUE 481s > 481s BEGIN TEST blockkr.R 481s 481s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 481s Copyright (C) 2025 The R Foundation for Statistical Computing 481s Platform: powerpc64le-unknown-linux-gnu 481s 481s R is free software and comes with ABSOLUTELY NO WARRANTY. 481s You are welcome to redistribute it under certain conditions. 481s Type 'license()' or 'licence()' for distribution details. 481s 481s R is a collaborative project with many contributors. 481s Type 'contributors()' for more information and 481s 'citation()' on how to cite R or R packages in publications. 481s 481s Type 'demo()' for some demos, 'help()' for on-line help, or 481s 'help.start()' for an HTML browser interface to help. 481s Type 'q()' to quit R. 481s 482s > library(sp) 482s > data(meuse) 482s > coordinates(meuse) = c("x", "y") 482s > new.locs <- SpatialPoints(data.frame( 482s + x = c(181170, 180310, 180205, 178673, 178770, 178270), 482s + y = c(333250, 332189, 331707, 330066, 330675, 331075))) 482s > library(gstat) 482s > krige(zinc ~ 1, meuse, new.locs, vgm(1.34e5, "Sph", 800, nug = 2.42e4), 482s + block = c(40,40), nmax = 40) 482s [using ordinary kriging] 482s coordinates var1.pred var1.var 482s 1 (181170, 333250) 268.7576 19447.67 482s 2 (180310, 332189) 663.4915 16991.33 482s 3 (180205, 331707) 251.4606 21579.71 482s 4 (178673, 330066) 532.5776 73807.91 482s 5 (178770, 330675) 664.4039 23589.17 482s 6 (178270, 331075) 565.5436 155113.23 482s > 482s > new.locs <- SpatialPoints(data.frame(x = c(181170), y = c(333250))) 482s > 482s > disc = c(-15,-5,5,15) 482s > block.irreg <- data.frame(expand.grid(x = disc, y = disc)) 482s > block.irreg 482s x y 482s 1 -15 -15 482s 2 -5 -15 482s 3 5 -15 482s 4 15 -15 482s 5 -15 -5 482s 6 -5 -5 482s 7 5 -5 482s 8 15 -5 482s 9 -15 5 482s 10 -5 5 482s 11 5 5 482s 12 15 5 482s 13 -15 15 482s 14 -5 15 482s 15 5 15 482s 16 15 15 482s > 482s > # first disable default Gaussian quadrature used for block integration, by 482s > # setting nblockdiscr explicitly: 482s > krige(zinc ~ 1, meuse, new.locs, model = vgm(1.34e5, "Sph", 800, nug = 2.42e4), 482s + block = c(40,40), nmax = 40, set = list(nblockdiscr=4)) 482s [using ordinary kriging] 482s coordinates var1.pred var1.var 482s 1 (181170, 333250) 268.7324 19568.76 482s > # now pass the same block discretization as block.irreg: 482s > krige(zinc ~ 1, meuse, new.locs, vgm(1.34e5, "Sph", 800, nug = 2.42e4), 482s + block = block.irreg, nmax = 40) 482s [using ordinary kriging] 482s coordinates var1.pred var1.var 482s 1 (181170, 333250) 268.7324 19568.76 482s > # check weights argument: 482s > block.irreg <- data.frame(expand.grid(x = disc, y = disc), weights = rep(1/16, 16)) 482s > krige(zinc ~ 1, meuse, new.locs, vgm(1.34e5, "Sph", 800, nug = 2.42e4), 482s + block = block.irreg, nmax = 40) 482s [using ordinary kriging] 482s coordinates var1.pred var1.var 482s 1 (181170, 333250) 268.7324 19568.76 482s > 482s BEGIN TEST covtable.R 482s 482s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 482s Copyright (C) 2025 The R Foundation for Statistical Computing 482s Platform: powerpc64le-unknown-linux-gnu 482s 482s R is free software and comes with ABSOLUTELY NO WARRANTY. 482s You are welcome to redistribute it under certain conditions. 482s Type 'license()' or 'licence()' for distribution details. 482s 482s R is a collaborative project with many contributors. 482s Type 'contributors()' for more information and 482s 'citation()' on how to cite R or R packages in publications. 482s 482s Type 'demo()' for some demos, 'help()' for on-line help, or 482s 'help.start()' for an HTML browser interface to help. 482s Type 'q()' to quit R. 482s 482s > library(gstat) 483s > d=expand.grid(x=c(-.5,.5), y=c(-.5,.5)) 483s > d$z=1:4 483s > vv=vgm(model = "Tab", covtable = 483s + variogramLine(vgm(1, "Sph", 1), 1, n=1e4,min = 0, covariance = TRUE)) 483s > vv 483s model psill maxdist 483s 1 Tab NA 1 483s covariance table: 483s [1] 1.0000000 0.7039712 0.4319496 0.2080384 0.0560108 0.0000000 483s > krige(z~1,~x+y,d,data.frame(x=0,y=0),vgm(1, "Sph", 1)) 483s [using ordinary kriging] 483s x y var1.pred var1.var 483s 1 0 0 2.5 1.017767 483s > krige(z~1,~x+y,d,data.frame(x=0,y=0),vv) 483s [using ordinary kriging] 483s x y var1.pred var1.var 483s 1 0 0 2.5 1.017863 483s > krige(z~1,~x+y,d[1:2,],data.frame(x=0,y=0),vgm(1, "Sph", 1)) 483s [using ordinary kriging] 483s x y var1.pred var1.var 483s 1 0 0 1.5 1.267767 483s > krige(z~1,~x+y,d[1:2,],data.frame(x=0,y=0),vv) 483s [using ordinary kriging] 483s x y var1.pred var1.var 483s 1 0 0 1.5 1.267863 483s > 483s BEGIN TEST cv.R 483s 483s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 483s Copyright (C) 2025 The R Foundation for Statistical Computing 483s Platform: powerpc64le-unknown-linux-gnu 483s 483s R is free software and comes with ABSOLUTELY NO WARRANTY. 483s You are welcome to redistribute it under certain conditions. 483s Type 'license()' or 'licence()' for distribution details. 483s 483s R is a collaborative project with many contributors. 483s Type 'contributors()' for more information and 483s 'citation()' on how to cite R or R packages in publications. 483s 483s Type 'demo()' for some demos, 'help()' for on-line help, or 483s 'help.start()' for an HTML browser interface to help. 483s Type 'q()' to quit R. 483s 483s > # try bivariate cokriging; cross validate first variable 483s > library(sp) 483s > data(meuse) 483s > library(gstat) 484s > g=gstat(NULL, "log-zinc", log(zinc)~1, ~x+y, meuse, nmax=10) 484s > g=gstat(g, "log-lead", log(lead)~1, ~x+y, meuse, nmax=10) 484s > g=gstat(g, "log-copper", log(copper)~1, ~x+y, meuse, nmax=10) 484s > v=variogram(g) 484s > g=gstat(g, model=vgm(1, "Sph", 1000), fill.all=T) 484s > g=fit.lmc(v, g) 484s > g 484s data: 484s log-zinc : formula = log(zinc)`~`1 ; data dim = 155 x 12 nmax = 10 484s log-lead : formula = log(lead)`~`1 ; data dim = 155 x 12 nmax = 10 484s log-copper : formula = log(copper)`~`1 ; data dim = 155 x 12 nmax = 10 484s variograms: 484s model psill range 484s log-zinc Sph 0.7132435 1000 484s log-lead Sph 0.6133020 1000 484s log-copper Sph 0.3634211 1000 484s log-zinc.log-lead Sph 0.6367012 1000 484s log-zinc.log-copper Sph 0.4570044 1000 484s log-lead.log-copper Sph 0.3934910 1000 484s ~x + y 484s > set.seed(13131) 484s > summary(gstat.cv(g, remove.all=TRUE, nfold=5)) 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s log.zinc.pred log.zinc.var observed residual 484s Min. :4.779 Min. :0.05426 Min. :4.727 Min. :-1.317697 484s 1st Qu.:5.396 1st Qu.:0.10872 1st Qu.:5.288 1st Qu.:-0.230224 484s Median :5.858 Median :0.13745 Median :5.787 Median :-0.034374 484s Mean :5.895 Mean :0.15249 Mean :5.886 Mean :-0.009094 484s 3rd Qu.:6.367 3rd Qu.:0.18303 3rd Qu.:6.514 3rd Qu.: 0.244075 484s Max. :7.358 Max. :0.60571 Max. :7.517 Max. : 1.414147 484s zscore fold x y 484s Min. :-3.35764 Min. :1.000 Min. :178605 Min. :329714 484s 1st Qu.:-0.58683 1st Qu.:2.000 1st Qu.:179371 1st Qu.:330762 484s Median :-0.10755 Median :3.000 Median :179991 Median :331633 484s Mean :-0.02766 Mean :2.852 Mean :180005 Mean :331635 484s 3rd Qu.: 0.70691 3rd Qu.:4.000 3rd Qu.:180630 3rd Qu.:332463 484s Max. : 3.43370 Max. :5.000 Max. :181390 Max. :333611 484s > summary(gstat.cv(g, remove.all=FALSE, nfold=5)) 484s Warning message: 484s In checkNames(value) : 484s attempt to set invalid names: this may lead to problems later on. See ?make.names 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s Intrinsic Correlation found. Good. 484s [using ordinary cokriging] 484s log.zinc.pred log.zinc.var observed residual 484s Min. :4.644 Min. :0.002371 Min. :4.727 Min. :-0.4190976 484s 1st Qu.:5.308 1st Qu.:0.004975 1st Qu.:5.288 1st Qu.:-0.0773273 484s Median :5.777 Median :0.005875 Median :5.787 Median : 0.0006165 484s Mean :5.883 Mean :0.006609 Mean :5.886 Mean : 0.0026164 484s 3rd Qu.:6.422 3rd Qu.:0.007419 3rd Qu.:6.514 3rd Qu.: 0.0825770 484s Max. :7.676 Max. :0.027247 Max. :7.517 Max. : 0.4659503 484s zscore fold x y 484s Min. :-4.793253 Min. :1.000 Min. :178605 Min. :329714 484s 1st Qu.:-1.080725 1st Qu.:2.000 1st Qu.:179371 1st Qu.:330762 484s Median : 0.007242 Median :3.000 Median :179991 Median :331633 484s Mean : 0.050487 Mean :2.974 Mean :180005 Mean :331635 484s 3rd Qu.: 1.117469 3rd Qu.:4.000 3rd Qu.:180630 3rd Qu.:332463 484s Max. : 6.475831 Max. :5.000 Max. :181390 Max. :333611 484s > 484s Warning message: 484s In checkNames(value) : 484s attempt to set invalid names: this may lead to problems later on. See ?make.names 484s BEGIN TEST cv3d.R 484s 484s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 484s Copyright (C) 2025 The R Foundation for Statistical Computing 484s Platform: powerpc64le-unknown-linux-gnu 484s 484s R is free software and comes with ABSOLUTELY NO WARRANTY. 484s You are welcome to redistribute it under certain conditions. 484s Type 'license()' or 'licence()' for distribution details. 484s 484s R is a collaborative project with many contributors. 484s Type 'contributors()' for more information and 484s 'citation()' on how to cite R or R packages in publications. 484s 484s Type 'demo()' for some demos, 'help()' for on-line help, or 484s 'help.start()' for an HTML browser interface to help. 484s Type 'q()' to quit R. 484s 484s > options(digits = 4) 484s > set.seed(1131) 484s > d = data.frame(x=runif(50),y=runif(50),z=runif(50),v=rnorm(50)) 484s > library(gstat) 485s > xx = krige.cv(v~1,~x+y+z,d,model=vgm(1,"Exp",1), verbose=F, set=list(debug=0)) 485s > summary(xx) 485s var1.pred var1.var observed residual 485s Min. :-1.163 Min. :0.116 Min. :-2.240 Min. :-2.1755 485s 1st Qu.:-0.571 1st Qu.:0.175 1st Qu.:-0.876 1st Qu.:-0.7881 485s Median :-0.201 Median :0.192 Median :-0.219 Median : 0.1175 485s Mean :-0.165 Mean :0.208 Mean :-0.142 Mean : 0.0233 485s 3rd Qu.: 0.161 3rd Qu.:0.240 3rd Qu.: 0.501 3rd Qu.: 0.8508 485s Max. : 1.085 Max. :0.426 Max. : 1.857 Max. : 2.5224 485s zscore fold x y 485s Min. :-5.1678 Min. : 1.0 Min. :0.00678 Min. :0.0034 485s 1st Qu.:-1.8749 1st Qu.:13.2 1st Qu.:0.23966 1st Qu.:0.2466 485s Median : 0.2453 Median :25.5 Median :0.48668 Median :0.4525 485s Mean : 0.0167 Mean :25.5 Mean :0.49966 Mean :0.4969 485s 3rd Qu.: 2.0201 3rd Qu.:37.8 3rd Qu.:0.74730 3rd Qu.:0.7394 485s Max. : 7.3541 Max. :50.0 Max. :0.98754 Max. :0.9872 485s z 485s Min. :0.00164 485s 1st Qu.:0.18646 485s Median :0.44850 485s Mean :0.47142 485s 3rd Qu.:0.72403 485s Max. :0.99420 485s > 485s BEGIN TEST fit.R 485s 485s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 485s Copyright (C) 2025 The R Foundation for Statistical Computing 485s Platform: powerpc64le-unknown-linux-gnu 485s 485s R is free software and comes with ABSOLUTELY NO WARRANTY. 485s You are welcome to redistribute it under certain conditions. 485s Type 'license()' or 'licence()' for distribution details. 485s 485s R is a collaborative project with many contributors. 485s Type 'contributors()' for more information and 485s 'citation()' on how to cite R or R packages in publications. 485s 485s Type 'demo()' for some demos, 'help()' for on-line help, or 485s 'help.start()' for an HTML browser interface to help. 485s Type 'q()' to quit R. 485s 485s > library(sp) 485s > data(meuse) 485s > library(gstat) 486s > v=variogram(log(zinc)~1,~x+y,meuse,cutoff=500,wi=100) 486s > v$gamma=c(0.5,1,2,3,3) 486s > fit.variogram(v, vgm(1, "Sph", 300, 0),warn.if.neg=TRUE) 486s model psill range 486s 1 Nug 0.000000 0.00 486s 2 Sph 7.878195 1567.77 486s > fit.variogram(v, vgm(1, "Sph", 300, 0),warn.if.neg=FALSE) 486s Warning message: 486s In fit.variogram(v, vgm(1, "Sph", 300, 0), warn.if.neg = TRUE) : 486s partial sill or nugget fixed at zero value 486s model psill range 486s 1 Nug 0.000000 0.00 486s 2 Sph 7.878195 1567.77 486s > 486s BEGIN TEST krige0.R 486s 486s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 486s Copyright (C) 2025 The R Foundation for Statistical Computing 486s Platform: powerpc64le-unknown-linux-gnu 486s 486s R is free software and comes with ABSOLUTELY NO WARRANTY. 486s You are welcome to redistribute it under certain conditions. 486s Type 'license()' or 'licence()' for distribution details. 486s 486s R is a collaborative project with many contributors. 486s Type 'contributors()' for more information and 486s 'citation()' on how to cite R or R packages in publications. 486s 486s Type 'demo()' for some demos, 'help()' for on-line help, or 486s 'help.start()' for an HTML browser interface to help. 486s Type 'q()' to quit R. 486s 486s > # test -- load data: 486s > library(sp) 486s > data(meuse) 486s > coordinates(meuse) = ~x+y 486s > data(meuse.grid) 486s > gridded(meuse.grid) = ~x+y 486s > 486s > library(gstat) 486s > # test -- idw 486s > meuse.grid$idw <- idw0(zinc~1, meuse, meuse.grid)[,1] 486s > x <- idw(zinc~1, meuse, meuse.grid) 486s [inverse distance weighted interpolation] 487s > all.equal(x$var1.pred, meuse.grid$idw) 487s [1] TRUE 487s > spplot(meuse.grid["idw"],col.regions=bpy.colors()) 487s > v = vgm(1, "Exp", 500) 487s > # test sk: 487s > x0 <- krige0(zinc~1, meuse, meuse.grid, v, beta = 500, computeVar = TRUE) 487s > rownames(x0$pred)=NULL 487s > x <- krige(zinc~1, meuse, meuse.grid, v, beta = 500) 487s [using simple kriging] 487s > all.equal(x$var1.pred, x0$pred[,1]) 487s [1] TRUE 487s > all.equal(x$var1.var, x0$var) 487s [1] TRUE 487s > # test ok: 487s > x0 <- krige0(zinc~1, meuse, meuse.grid, v, computeVar = TRUE) 487s > rownames(x0$pred)=NULL 487s > names(x0$var)=NULL 487s > x <- krige(zinc~1, meuse, meuse.grid, v) 487s [using ordinary kriging] 487s > all.equal(x$var1.pred, x0$pred[,1]) 487s [1] TRUE 487s > all.equal(x$var1.var, x0$var) 487s [1] TRUE 487s > # test uk: 487s > x0 <- krige0(zinc~sqrt(dist), meuse, meuse.grid, v, computeVar = TRUE) 487s > rownames(x0$pred)=NULL 487s > names(x0$var)=NULL 487s > x <- krige(zinc~sqrt(dist), meuse, meuse.grid, v) 487s [using universal kriging] 487s > all.equal(x$var1.pred, x0$pred[,1]) 487s [1] TRUE 487s > all.equal(x$var1.var, x0$var) 487s [1] TRUE 487s > 487s BEGIN TEST line.R 488s 488s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 488s Copyright (C) 2025 The R Foundation for Statistical Computing 488s Platform: powerpc64le-unknown-linux-gnu 488s 488s R is free software and comes with ABSOLUTELY NO WARRANTY. 488s You are welcome to redistribute it under certain conditions. 488s Type 'license()' or 'licence()' for distribution details. 488s 488s R is a collaborative project with many contributors. 488s Type 'contributors()' for more information and 488s 'citation()' on how to cite R or R packages in publications. 488s 488s Type 'demo()' for some demos, 'help()' for on-line help, or 488s 'help.start()' for an HTML browser interface to help. 488s Type 'q()' to quit R. 488s 488s > options(digits=5) 488s > library(sp) 488s > data(meuse.grid) 488s > gridded(meuse.grid) = ~x+y 488s > data(meuse) 488s > coordinates(meuse) = ~x+y 488s > 488s > # choose arbitrary line over the grid: 488s > image(meuse.grid["dist"],axes=T) 488s > pp = rbind(c(180000,331000),c(180000,332000),c(181000,333500)) 488s > Sl = SpatialLines(list(Lines(list(Line(pp)), "a"))) 488s > plot(Sl,add=T,col='green') 488s > 488s > # use the default spsample arguments of predict.gstat: 488s > pts=spsample(Sl,n=500,'regular',offset=c(.5,.5)) 488s > plot(pts, pch=3, cex=.2, add=T) 488s > 488s > library(gstat) 488s > v = vgm(.6, "Sph", 900, .06) 488s > out1 = krige(log(zinc)~1, meuse, Sl, v) 488s [using ordinary kriging] 488s > out1 488s An object of class "SpatialLinesDataFrame" 488s Slot "data": 488s x y var1.pred var1.var 488s a 180333 332167 6.1618 0.008025 488s 488s Slot "lines": 488s [[1]] 488s An object of class "Lines" 488s Slot "Lines": 488s [[1]] 488s An object of class "Line" 488s Slot "coords": 488s [,1] [,2] 488s [1,] 180000 331000 488s [2,] 180000 332000 488s [3,] 181000 333500 488s 488s 488s 488s Slot "ID": 488s [1] "a" 488s 488s 488s 488s Slot "bbox": 488s min max 488s x 180000 181000 488s y 331000 333500 488s 488s Slot "proj4string": 488s Coordinate Reference System: 488s Deprecated Proj.4 representation: NA 488s 488s > 488s > points(180333,332167,pch=3,cex=2) 488s > 488s > # use the same line as block discretization, and predict for (0,0) 488s > # (because the block discretizing points are not centered) 488s > out2 = krige(log(zinc)~1, meuse, SpatialPoints(matrix(0,1,2)), v, block=coordinates(pts)) 488s [using ordinary kriging] 488s > out2 488s coordinates var1.pred var1.var 488s 1 (0, 0) 6.1618 0.008025 488s > 488s > compare.krigingLines = function(formula, data, newdata, model) { 488s + out1 = krige(formula, data, newdata, model) 488s + pts = spsample(newdata, n=500, 'regular', offset=.5) 488s + out2 = krige(formula, data, SpatialPoints(matrix(0,1,2)), model, block = coordinates(pts)) 488s + print("difference:") 488s + as.data.frame(out1)[3:4]- as.data.frame(out2)[3:4] 488s + } 488s > 488s > compare.krigingLines(log(zinc)~1, meuse, Sl, v) 488s [using ordinary kriging] 488s [using ordinary kriging] 488s [1] "difference:" 488s var1.pred var1.var 488s a 0 0 488s > 488s > # one line, consisting of two line segments: 488s > pp2 = rbind(c(181000,333500),c(181000,332500)) 488s > Sl2 = SpatialLines(list(Lines(list(Line(pp),Line(pp2)), "a"))) 488s > krige(log(zinc)~1, meuse, Sl2, v) 488s [using ordinary kriging] 488s An object of class "SpatialLinesDataFrame" 488s Slot "data": 488s x y var1.pred var1.var 488s a 180667 332583 6.0424 0.0053191 488s 488s Slot "lines": 488s [[1]] 488s An object of class "Lines" 488s Slot "Lines": 488s [[1]] 488s An object of class "Line" 488s Slot "coords": 488s [,1] [,2] 488s [1,] 180000 331000 488s [2,] 180000 332000 488s [3,] 181000 333500 488s 488s 488s [[2]] 488s An object of class "Line" 488s Slot "coords": 488s [,1] [,2] 488s [1,] 181000 333500 488s [2,] 181000 332500 488s 488s 488s 488s Slot "ID": 488s [1] "a" 488s 488s 488s 488s Slot "bbox": 488s min max 488s x 180000 181000 488s y 331000 333500 488s 488s Slot "proj4string": 488s Coordinate Reference System: 488s Deprecated Proj.4 representation: NA 488s 488s > compare.krigingLines(log(zinc)~1, meuse, Sl2, v) 488s [using ordinary kriging] 488s [using ordinary kriging] 488s [1] "difference:" 488s var1.pred var1.var 488s a 0 0 488s > 488s > # two seperate line segments: 488s > Sl3 = SpatialLines(list(Lines(list(Line(pp)), "a"),Lines(list(Line(pp2)),"b"))) 488s > krige(log(zinc)~1, meuse, Sl3, v) 488s [using ordinary kriging] 488s An object of class "SpatialLinesDataFrame" 488s Slot "data": 488s x y var1.pred var1.var 488s a 180333 332167 6.1618 0.008025 488s b 181000 333000 5.7060 0.011043 488s 488s Slot "lines": 488s [[1]] 488s An object of class "Lines" 488s Slot "Lines": 488s [[1]] 488s An object of class "Line" 488s Slot "coords": 488s [,1] [,2] 488s [1,] 180000 331000 488s [2,] 180000 332000 488s [3,] 181000 333500 488s 488s 488s 488s Slot "ID": 488s [1] "a" 488s 488s 488s [[2]] 488s An object of class "Lines" 488s Slot "Lines": 488s [[1]] 488s An object of class "Line" 488s Slot "coords": 488s [,1] [,2] 488s [1,] 181000 333500 488s [2,] 181000 332500 488s 488s 488s 488s Slot "ID": 488s [1] "b" 488s 488s 488s 488s Slot "bbox": 488s min max 488s x 180000 181000 488s y 331000 333500 488s 488s Slot "proj4string": 488s Coordinate Reference System: 488s Deprecated Proj.4 representation: NA 488s 488s > 488s BEGIN TEST merge.R 489s 489s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 489s Copyright (C) 2025 The R Foundation for Statistical Computing 489s Platform: powerpc64le-unknown-linux-gnu 489s 489s R is free software and comes with ABSOLUTELY NO WARRANTY. 489s You are welcome to redistribute it under certain conditions. 489s Type 'license()' or 'licence()' for distribution details. 489s 489s R is a collaborative project with many contributors. 489s Type 'contributors()' for more information and 489s 'citation()' on how to cite R or R packages in publications. 489s 489s Type 'demo()' for some demos, 'help()' for on-line help, or 489s 'help.start()' for an HTML browser interface to help. 489s Type 'q()' to quit R. 489s 489s > options(digits=6) 489s > # illustrates the use of merge, for merging parameters accross variables: 489s > # Z1=m+e1(s) 489s > # Z2=m+e2(s) 489s > # Z1 and Z2 each have a different variogram, but share the parameter m 489s > # see documentation of gstat() function 489s > library(gstat) 489s > d1 = data.frame(x=c(0,2),y=c(0,0),z=c(0,1)) 489s > d2 = data.frame(x=c(0,2),y=c(2,2),z=c(4,5)) 489s > g = gstat(NULL,"d1", z~1,~x+y,d1,model=vgm(1, "Exp", 1)) 489s > g = gstat(g,"d2", z~1,~x+y,d2,model=vgm(1, "Exp", 1), merge=c("d1","d2")) 489s > g = gstat(g, c("d1", "d2"), model = vgm(0.5, "Exp", 1)) 489s > predict(g, data.frame(x=1,y=1), debug = 32) 489s Intrinsic Correlation found. Good. 489s [using ordinary cokriging] 489s we're at location X: 1 Y: 1 Z: 0 489s zero block size 489s we're at point X: 1 Y: 1 Z: 0 489s 489s # X: 489s #Matrix: 4 by 1 489s rbind( 489s c( 1.000000), # row 1 489s c( 1.000000), # row 2 489s c( 1.000000), # row 3 489s c( 1.000000) # row 4 489s ) 489s [using generalized covariances: max_val - semivariance()] 489s # Covariances (x_i, x_j) matrix C (upper triangle): 489s #Matrix: 4 by 4 489s rbind( 489s c( 1.000000, 0.135335, 0.067668, 0.029553), # row 1 489s c( 0.135335, 1.000000, 0.029553, 0.067668), # row 2 489s c( 0.067668, 0.029553, 1.000000, 0.135335), # row 3 489s c( 0.029553, 0.067668, 0.135335, 1.000000) # row 4 489s ) 489s 489s # glm->C, Choleski decomposed:: 489s #Matrix: 4 by 4 489s rbind( 489s c( 1.000000, 0.135335, 0.067668, 0.029553), # row 1 489s c( 0.000000, 0.990800, 0.020584, 0.064259), # row 2 489s c( 0.000000, 0.000000, 0.997496, 0.132344), # row 3 489s c( 0.000000, 0.000000, 0.000000, 0.988677) # row 4 489s ) 489s 489s # X'C-1 X: 489s #Matrix: 1 by 1 489s rbind( 489s c( 3.245289) # row 1 489s ) 489s 489s # beta: 489s #Vector: dim: 1 489s c( 2.500000) 489s # Cov(beta), (X'C-1 X)-1: 489s #Matrix: 1 by 1 489s rbind( 489s c( 0.308139) # row 1 489s ) 489s 489s # Corr(beta): 489s #Matrix: 1 by 1 489s rbind( 489s c( 1.000000) # row 1 489s ) 489s 489s # X0 (X values at prediction location x0): 489s #Matrix: 1 by 2 489s rbind( 489s c( 1.000000, 1.000000) # row 1 489s ) 489s 489s # BLUE(mu), E(y(x0)) = X0'beta: 489s #Vector: dim: 2 489s c( 2.500000, 2.500000) 489s # Covariances (x_i, x_0), C0: 489s #Matrix: 4 by 2 489s rbind( 489s c( 0.243117, 0.121558), # row 1 489s c( 0.243117, 0.121558), # row 2 489s c( 0.121558, 0.243117), # row 3 489s c( 0.121558, 0.243117) # row 4 489s ) 489s 489s # C-1 C0: 489s #Matrix: 4 by 2 489s rbind( 489s c( 0.206482, 0.089387), # row 1 489s c( 0.206482, 0.089387), # row 2 489s c( 0.089387, 0.206482), # row 3 489s c( 0.089387, 0.206482) # row 4 489s ) 489s 489s # [a] Cov_ij(B,B) or Cov_ij(0,0): 489s #Matrix: 2 by 2 489s rbind( 489s c( 1.000000, 0.500000), # row 1 489s c( 0.500000, 1.000000) # row 2 489s ) 489s 489s # [c] (x0-X'C-1 c0)'(X'C-1 X)-1(x0-X'C-1 c0): 489s #Matrix: 2 by 2 489s rbind( 489s c( 0.051360, 0.051360), # row 1 489s c( 0.051360, 0.051360) # row 2 489s ) 489s 489s # [b] c0'C-1 c0: 489s #Matrix: 2 by 2 489s rbind( 489s c( 0.122130, 0.093662), # row 1 489s c( 0.093662, 0.122130) # row 2 489s ) 489s 489s # Best Linear Unbiased Predictor: 489s #Vector: dim: 2 489s c( 2.031619, 2.968381) 489s # MSPE ([a]-[b]+[c]): 489s #Matrix: 2 by 2 489s rbind( 489s c( 0.929230, 0.457698), # row 1 489s c( 0.457698, 0.929230) # row 2 489s ) 489s 489s # kriging weights: 489s #Matrix: 4 by 2 489s rbind( 489s c( 0.308548, 0.191452), # row 1 489s c( 0.308548, 0.191452), # row 2 489s c( 0.191452, 0.308548), # row 3 489s c( 0.191452, 0.308548) # row 4 489s ) 489s 489s 489s x y d1.pred d1.var d2.pred d2.var cov.d1.d2 489s 1 1 1 2.03162 0.92923 2.96838 0.92923 0.457698 489s > 489s > # Z1 and Z2 share a regression slope: 489s > g = gstat(NULL,"d1", z~x,~x+y,d1,model=vgm(1, "Exp", 1)) 489s > g = gstat(g,"d2", z~x,~x+y,d2,model=vgm(1, "Exp", 1), 489s + merge=list(c("d1",2,"d2",2))) 489s > g = gstat(g, c("d1", "d2"), model = vgm(0.5, "Exp", 1)) 489s > predict(g, data.frame(x=1,y=1), debug = 32) 489s Intrinsic Correlation found. Good. 489s [using universal cokriging] 489s we're at location X: 1 Y: 1 Z: 0 489s zero block size 489s we're at point X: 1 Y: 1 Z: 0 489s 489s # X: 489s #Matrix: 4 by 3 489s rbind( 489s c( 1.000000, 0.000000, 0.000000), # row 1 489s c( 1.000000, 2.000000, 0.000000), # row 2 489s c( 0.000000, 0.000000, 1.000000), # row 3 489s c( 0.000000, 2.000000, 1.000000) # row 4 489s ) 489s [using generalized covariances: max_val - semivariance()] 489s # Covariances (x_i, x_j) matrix C (upper triangle): 489s #Matrix: 4 by 4 489s rbind( 489s c( 1.000000, 0.135335, 0.067668, 0.029553), # row 1 489s c( 0.135335, 1.000000, 0.029553, 0.067668), # row 2 489s c( 0.067668, 0.029553, 1.000000, 0.135335), # row 3 489s c( 0.029553, 0.067668, 0.135335, 1.000000) # row 4 489s ) 489s 489s # glm->C, Choleski decomposed:: 489s #Matrix: 4 by 4 489s rbind( 489s c( 1.000000, 0.135335, 0.067668, 0.029553), # row 1 489s c( 0.000000, 0.990800, 0.020584, 0.064259), # row 2 489s c( 0.000000, 0.000000, 0.997496, 0.132344), # row 3 489s c( 0.000000, 0.000000, 0.000000, 0.988677) # row 4 489s ) 489s 489s # X'C-1 X: 489s #Matrix: 3 by 3 489s rbind( 489s c( 1.774607, 1.622645, -0.151962), # row 1 489s c( 1.622645, 7.676050, 1.622645), # row 2 489s c(-0.151962, 1.622645, 1.774607) # row 3 489s ) 489s 489s # beta: 489s #Vector: dim: 3 489s c( 0.000000, 0.500000, 4.000000) 489s # Cov(beta), (X'C-1 X)-1: 489s #Matrix: 3 by 3 489s rbind( 489s c( 0.793363, -0.225695, 0.274305), # row 1 489s c(-0.225695, 0.225695, -0.225695), # row 2 489s c( 0.274305, -0.225695, 0.793363) # row 3 489s ) 489s 489s # Corr(beta): 489s #Matrix: 3 by 3 489s rbind( 489s c( 1.000000, -0.533366, 0.345750), # row 1 489s c(-0.533366, 1.000000, -0.533366), # row 2 489s c( 0.345750, -0.533366, 1.000000) # row 3 489s ) 489s 489s # X0 (X values at prediction location x0): 489s #Matrix: 3 by 2 489s rbind( 489s c( 1.000000, 0.000000), # row 1 489s c( 1.000000, 1.000000), # row 2 489s c( 0.000000, 1.000000) # row 3 489s ) 489s 489s # BLUE(mu), E(y(x0)) = X0'beta: 489s #Vector: dim: 2 489s c( 0.500000, 4.500000) 489s # Covariances (x_i, x_0), C0: 489s #Matrix: 4 by 2 489s rbind( 489s c( 0.243117, 0.121558), # row 1 489s c( 0.243117, 0.121558), # row 2 489s c( 0.121558, 0.243117), # row 3 489s c( 0.121558, 0.243117) # row 4 489s ) 489s 489s # C-1 C0: 489s #Matrix: 4 by 2 489s rbind( 489s c( 0.206482, 0.089387), # row 1 489s c( 0.206482, 0.089387), # row 2 489s c( 0.089387, 0.206482), # row 3 489s c( 0.089387, 0.206482) # row 4 489s ) 489s 489s # [a] Cov_ij(B,B) or Cov_ij(0,0): 489s #Matrix: 2 by 2 489s rbind( 489s c( 1.000000, 0.500000), # row 1 489s c( 0.500000, 1.000000) # row 2 489s ) 489s 489s # [c] (x0-X'C-1 c0)'(X'C-1 X)-1(x0-X'C-1 c0): 489s #Matrix: 2 by 2 489s rbind( 489s c( 0.203564, -0.100844), # row 1 489s c(-0.100844, 0.203564) # row 2 489s ) 489s 489s # [b] c0'C-1 c0: 489s #Matrix: 2 by 2 489s rbind( 489s c( 0.122130, 0.093662), # row 1 489s c( 0.093662, 0.122130) # row 2 489s ) 489s 489s # Best Linear Unbiased Predictor: 489s #Vector: dim: 2 489s c( 0.500000, 4.500000) 489s # MSPE ([a]-[b]+[c]): 489s #Matrix: 2 by 2 489s rbind( 489s c( 1.081434, 0.305494), # row 1 489s c( 0.305494, 1.081434) # row 2 489s ) 489s 489s # kriging weights: 489s #Matrix: 4 by 2 489s rbind( 489s c( 0.500000, 0.000000), # row 1 489s c( 0.500000, 0.000000), # row 2 489s c( 0.000000, 0.500000), # row 3 489s c( 0.000000, 0.500000) # row 4 489s ) 489s 489s 489s x y d1.pred d1.var d2.pred d2.var cov.d1.d2 489s 1 1 1 0.5 1.08143 4.5 1.08143 0.305494 489s > 489s BEGIN TEST na.action.R 489s 489s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 489s Copyright (C) 2025 The R Foundation for Statistical Computing 489s Platform: powerpc64le-unknown-linux-gnu 489s 489s R is free software and comes with ABSOLUTELY NO WARRANTY. 489s You are welcome to redistribute it under certain conditions. 489s Type 'license()' or 'licence()' for distribution details. 489s 489s R is a collaborative project with many contributors. 489s Type 'contributors()' for more information and 489s 'citation()' on how to cite R or R packages in publications. 489s 489s Type 'demo()' for some demos, 'help()' for on-line help, or 489s 'help.start()' for an HTML browser interface to help. 489s Type 'q()' to quit R. 489s 489s > library(sp) 489s > 489s > data(meuse) 490s > data(meuse.grid) 490s > 490s > set.seed(13131) # reproduce results 490s > 490s > # select 10 random rows; 490s > # create two missing values in the coordinates: 490s > m = meuse.grid[sample(nrow(meuse.grid), 10), ] 490s > m[c(2,8), "x"] = NA 490s > 490s > library(gstat) 490s > ## this is not allowed anymore: 490s > try(krige(log(zinc)~1,~x+y,meuse,m, na.action = na.pass)) 490s > try(krige(log(zinc)~1,~x+y,meuse,m, na.action = na.omit)) 490s Error in na.fail.default(structure(list(x = c(179220, NA, 178740, 179300, : 490s missing values in object 490s > try(krige(log(zinc)~1,~x+y,meuse,m, na.action = na.exclude)) 490s Error in na.fail.default(structure(list(x = c(179220, NA, 178740, 179300, : 490s missing values in object 490s > Error in na.fail.default(structure(list(x = c(179220, NA, 178740, 179300, : 490s missing values in object 490s try(krige(log(zinc)~1,~x+y,meuse,m, na.action = na.fail)) 490s Error in na.fail.default(structure(list(x = c(179220, NA, 178740, 179300, : 490s missing values in object 490s > 490s > # select 10 random rows; 490s > # create two missing values in the regressor variable: 490s > m = meuse.grid[sample(nrow(meuse.grid), 10), ] 490s > m[c(3,7), "dist"] = NA 490s > krige(log(zinc)~dist,~x+y,meuse,m, na.action = na.pass) 490s [ordinary or weighted least squares prediction] 490s x y var1.pred var1.var 490s 1 178860 330860 6.530134 0.2415196 490s 2 180260 331860 5.389567 0.2406041 490s 3 180100 331860 NA NA 490s 4 180460 331820 5.213370 0.2417197 490s 5 179660 330580 5.550859 0.2398778 490s 6 179740 330300 6.108648 0.2395392 490s 7 180220 330660 NA NA 490s 8 178580 329820 6.533801 0.2415453 490s 9 180100 331900 5.580264 0.2397758 490s 10 180780 331900 5.095967 0.2426499 490s > krige(log(zinc)~dist,~x+y,meuse,m, na.action = na.omit) 490s [ordinary or weighted least squares prediction] 490s x y var1.pred var1.var 490s 1877 178860 330860 6.530134 0.2415196 490s 1015 180260 331860 5.389567 0.2406041 490s 1056 180460 331820 5.213370 0.2417197 490s 2199 179660 330580 5.550859 0.2398778 490s 2556 179740 330300 6.108648 0.2395392 490s 2985 178580 329820 6.533801 0.2415453 490s 975 180100 331900 5.580264 0.2397758 490s 992 180780 331900 5.095967 0.2426499 490s > krige(log(zinc)~dist,~x+y,meuse,m, na.action = na.exclude) 490s [ordinary or weighted least squares prediction] 490s x y var1.pred var1.var 490s 1877 178860 330860 6.530134 0.2415196 490s 1015 180260 331860 5.389567 0.2406041 490s 1056 180460 331820 5.213370 0.2417197 490s 2199 179660 330580 5.550859 0.2398778 490s 2556 179740 330300 6.108648 0.2395392 490s 2985 178580 329820 6.533801 0.2415453 490s 975 180100 331900 5.580264 0.2397758 490s 992 180780 331900 5.095967 0.2426499 490s > try(krige(log(zinc)~dist,~x+y,meuse,m, na.action = na.fail)) 490s > 490s Error in na.fail.default(structure(list(dist = c(0.00135803, 0.423804, : 490s missing values in object 490s BEGIN TEST rings.R 490s 490s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 490s Copyright (C) 2025 The R Foundation for Statistical Computing 490s Platform: powerpc64le-unknown-linux-gnu 490s 490s R is free software and comes with ABSOLUTELY NO WARRANTY. 490s You are welcome to redistribute it under certain conditions. 490s Type 'license()' or 'licence()' for distribution details. 490s 490s R is a collaborative project with many contributors. 490s Type 'contributors()' for more information and 490s 'citation()' on how to cite R or R packages in publications. 490s 490s Type 'demo()' for some demos, 'help()' for on-line help, or 490s 'help.start()' for an HTML browser interface to help. 490s Type 'q()' to quit R. 490s 490s > library(sp) 490s > library(gstat) 491s > set.seed(13331) 491s > 491s > x = runif(10) 491s > y = runif(10) 491s > z = rnorm(10) 491s > d = data.frame(x=x,y=y,z=z) 491s > bl = c(1,1) 491s > 491s > nd = data.frame(x=.5, y=.5) 491s > 491s > # single block: 491s > library(sp) 491s > coordinates(d) = ~x+y 491s > nd = SpatialPoints(nd) 491s > xx = krige(z~1, d, nd, model=vgm(1, "Exp", 1), block = bl, 491s + set = list(nb=4)) 491s [using ordinary kriging] 491s > 491s > ring = cbind(c(0,bl[1],bl[1],0,0), c(0,0,bl[2],bl[2],0)) 491s > r1 = SpatialPolygons(list(Polygons(list(Polygon(ring)), ID = "xx"))) 491s > a = data.frame(a = 1, b = 2) 491s > rownames(a) = "xx" 491s > r1df = SpatialPolygonsDataFrame(r1, a) 491s > 491s > g = gstat(formula=z~1, data=d, model=vgm(1, "Exp", 1)) 491s > args = list(type = "regular", n=16, offset=c(0.5,0.5)) 491s > yy = predict(g, r1df, block = bl, sps.args = args) 491s [using ordinary kriging] 491s > 491s > xx = as.data.frame(xx) 491s > yy = as.data.frame(yy) 491s > row.names(xx) = row.names(yy) 491s > print(all.equal(xx,yy)) 491s [1] TRUE 491s > 491s > ## multiple blocks of equal size: 491s > nd = data.frame(x= 0:4 + .5, y=rep(.5,5)) 491s > nd = SpatialPoints(nd) 491s > xx = krige(z~1, d, nd, model=vgm(1, "Exp", 1), block = bl, 491s + set = list(nb=4)) 491s [using ordinary kriging] 491s > ring0 = cbind(c(0,bl[1],bl[1],0,0), c(0,0,bl[2],bl[2],0)) 491s > ring1 = cbind(c(1+0,1+bl[1],1+bl[1],1+0,1+0), c(0,0,bl[2],bl[2],0)) 491s > ring2 = cbind(c(2+0,2+bl[1],2+bl[1],2+0,2+0), c(0,0,bl[2],bl[2],0)) 491s > ring3 = cbind(c(3+0,3+bl[1],3+bl[1],3+0,3+0), c(0,0,bl[2],bl[2],0)) 491s > ring4 = cbind(c(4+0,4+bl[1],4+bl[1],4+0,4+0), c(0,0,bl[2],bl[2],0)) 491s > r1 = SpatialPolygons(list( 491s + Polygons(list(Polygon(ring0)), ID = "x0"), 491s + Polygons(list(Polygon(ring1)), ID = "x1"), 491s + Polygons(list(Polygon(ring2)), ID = "x2"), 491s + Polygons(list(Polygon(ring3)), ID = "x3"), 491s + Polygons(list(Polygon(ring4)), ID = "x4") 491s + )) 491s > df = data.frame(a=rep(1,5), b= rep(1,5)) 491s > rownames(df) = c("x0", "x1", "x2", "x3", "x4") 491s > r1df = SpatialPolygonsDataFrame(r1, df) 491s > 491s > yy = predict(g, r1, block = bl, sps.args = args) 491s [using ordinary kriging] 491s > xx = as.data.frame(xx) 491s > yy = as.data.frame(yy) 491s > row.names(xx) = row.names(yy) 491s > all.equal(xx, yy) 491s [1] TRUE 491s > 491s > ## multiple blocks of equal size: 491s > args = list(type = "regular", cellsize=.25, offset=c(0.5,0.5), n=16) 491s > yy = predict(g, r1, block = bl, sps.args = args) 491s [using ordinary kriging] 491s > xx = as.data.frame(xx) 491s > yy = as.data.frame(yy) 491s > row.names(xx) = row.names(yy) 491s > print(all.equal(xx, yy)) 491s [1] TRUE 491s > 491s > ## multiple blocks of varying size: 491s > nd = data.frame(x=c(0.5, 2, 4.5), y=c(0.5, 1, 1.5)) 491s > nd = SpatialPoints(nd) 491s > bl = c(1,1) 491s > ring0 = cbind(c(0,bl[1],bl[1],0,0), c(0,0,bl[2],bl[2],0)) 491s > xx1 = krige(z~1, d, nd[1], model=vgm(1, "Exp", 1), block = bl, 491s + set = list(nb=4)) 491s [using ordinary kriging] 491s > bl = c(2,2) 491s > ring1 = cbind(c(1+0,1+bl[1],1+bl[1],1+0,1+0), c(0,0,bl[2],bl[2],0)) 491s > xx2 = krige(z~1, d, nd[2], model=vgm(1, "Exp", 1), block = bl, 491s + set = list(nb=4)) 491s [using ordinary kriging] 491s > bl = c(3,3) 491s > ring2 = cbind(c(3+0,3+bl[1],3+bl[1],3+0,3+0), c(0,0,bl[2],bl[2],0)) 491s > xx3 = krige(z~1, d, nd[3], model=vgm(1, "Exp", 1), block = bl, 491s + set = list(nb=4)) 491s [using ordinary kriging] 491s > r1 = SpatialPolygons(list( 491s + Polygons(list(Polygon(ring0)), ID = "x0"), 491s + Polygons(list(Polygon(ring1)), ID = "x1"), 491s + Polygons(list(Polygon(ring2)), ID = "x2") 491s + )) 491s > df = data.frame(a = rep(1,3), b = rep(1,3)) 491s > rownames(df) = c("x0", "x1", "x2") 491s > r1df = SpatialPolygonsDataFrame(r1, df) 491s > 491s > args = list(type = "regular", n=16, offset=c(0.5,0.5)) 491s > yy = predict(g, r1df, block = bl, sps.args = args) 491s [using ordinary kriging] 491s > xx = rbind(as.data.frame(xx1), as.data.frame(xx2), as.data.frame(xx3)) 491s > row.names(xx) = 1:3 491s > xx = as.data.frame(xx) 491s > yy = as.data.frame(yy) 491s > row.names(xx) = row.names(yy) 491s > print(all.equal(xx, yy)) 491s [1] TRUE 491s > 491s BEGIN TEST sim.R 491s 491s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 491s Copyright (C) 2025 The R Foundation for Statistical Computing 491s Platform: powerpc64le-unknown-linux-gnu 491s 491s R is free software and comes with ABSOLUTELY NO WARRANTY. 491s You are welcome to redistribute it under certain conditions. 491s Type 'license()' or 'licence()' for distribution details. 491s 491s R is a collaborative project with many contributors. 491s Type 'contributors()' for more information and 491s 'citation()' on how to cite R or R packages in publications. 491s 491s Type 'demo()' for some demos, 'help()' for on-line help, or 491s 'help.start()' for an HTML browser interface to help. 491s Type 'q()' to quit R. 491s 491s > options(digits=6) 491s > library(sp) 491s > data(meuse) 491s > set.seed(158229572) 491s > new.locs <- data.frame(x = c(181170, 180310, 180205, 178673, 178770, 178270), 491s + y = c(333250, 332189, 331707, 330066, 330675, 331075)) 491s > library(gstat) 492s > krige(zinc ~ 1, ~ x + y, meuse, newdata = new.locs, 492s + model = vgm(1.34e5, "Sph", 800, nug = 2.42e4), 492s + block = c(40,40), nmax = 40, nsim = 10) 492s drawing 10 GLS realisations of beta... 492s [using conditional Gaussian simulation] 492s x y sim1 sim2 sim3 sim4 sim5 sim6 sim7 492s 1 181170 333250 267.385 27.5686 428.144 381.576 151.119 175.890 293.273 492s 2 180310 332189 429.437 659.6579 564.023 611.666 612.756 619.791 771.961 492s 3 180205 331707 205.978 412.7276 271.827 380.349 169.488 369.822 266.026 492s 4 178673 330066 117.479 684.0663 399.148 585.096 606.396 867.866 807.634 492s 5 178770 330675 780.072 837.4628 682.690 911.052 600.984 783.019 749.476 492s 6 178270 331075 1025.778 1582.0269 614.235 332.377 660.228 589.447 972.018 492s sim8 sim9 sim10 492s 1 294.107 113.347 279.991 492s 2 776.498 724.160 901.692 492s 3 338.021 630.244 140.272 492s 4 127.301 957.242 444.007 492s 5 533.773 748.144 623.960 492s 6 1084.170 537.604 -214.972 492s > 492s BEGIN TEST stars.R 492s 492s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 492s Copyright (C) 2025 The R Foundation for Statistical Computing 492s Platform: powerpc64le-unknown-linux-gnu 492s 492s R is free software and comes with ABSOLUTELY NO WARRANTY. 492s You are welcome to redistribute it under certain conditions. 492s Type 'license()' or 'licence()' for distribution details. 492s 492s R is a collaborative project with many contributors. 492s Type 'contributors()' for more information and 492s 'citation()' on how to cite R or R packages in publications. 492s 492s Type 'demo()' for some demos, 'help()' for on-line help, or 492s 'help.start()' for an HTML browser interface to help. 492s Type 'q()' to quit R. 492s 492s > Sys.setenv(TZ = "UTC") 492s > 492s > # 0. using sp: 492s > 492s > suppressPackageStartupMessages(library(sp)) 492s > demo(meuse, ask = FALSE) 492s 492s 492s demo(meuse) 492s ---- ~~~~~ 492s 492s > require(sp) 492s 492s > crs = CRS("EPSG:28992") 492s 492s > data("meuse") 492s 492s > coordinates(meuse) <- ~x+y 492s 492s > proj4string(meuse) <- crs 492s 492s > data("meuse.grid") 492s 492s > coordinates(meuse.grid) <- ~x+y 492s 492s > gridded(meuse.grid) <- TRUE 492s 492s > proj4string(meuse.grid) <- crs 492s 492s > data("meuse.riv") 492s 492s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv"))) 492s 492s > proj4string(meuse.riv) <- crs 492s 492s > data("meuse.area") 492s 492s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area"))) 492s 492s > proj4string(meuse.area) <- crs 492s > suppressPackageStartupMessages(library(gstat)) 493s > v = variogram(log(zinc)~1, meuse) 493s > (v.fit = fit.variogram(v, vgm(1, "Sph", 900, 1))) 493s model psill range 493s 1 Nug 0.05066243 0.0000 493s 2 Sph 0.59060780 897.0209 493s > k_sp = krige(log(zinc)~1, meuse[-(1:5),], meuse[1:5,], v.fit) 493s [using ordinary kriging] 493s > k_sp_grd = krige(log(zinc)~1, meuse, meuse.grid, v.fit) 493s [using ordinary kriging] 493s > 493s > # 1. using sf: 493s > suppressPackageStartupMessages(library(sf)) 493s > demo(meuse_sf, ask = FALSE, echo = FALSE) 493s > # reloads meuse as data.frame, so 493s > demo(meuse, ask = FALSE) 493s 493s 493s demo(meuse) 493s ---- ~~~~~ 493s 493s > require(sp) 493s 493s > crs = CRS("EPSG:28992") 493s 493s > data("meuse") 493s 493s > coordinates(meuse) <- ~x+y 493s 493s > proj4string(meuse) <- crs 493s 493s > data("meuse.grid") 493s 493s > coordinates(meuse.grid) <- ~x+y 493s 493s > gridded(meuse.grid) <- TRUE 493s 493s > proj4string(meuse.grid) <- crs 493s 493s > data("meuse.riv") 493s 493s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv"))) 493s 493s > proj4string(meuse.riv) <- crs 493s 493s > data("meuse.area") 493s 493s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area"))) 493s 493s > proj4string(meuse.area) <- crs 493s > 493s > v = variogram(log(zinc)~1, meuse_sf) 493s > (v.fit = fit.variogram(v, vgm(1, "Sph", 900, 1))) 493s model psill range 493s 1 Nug 0.05066243 0.0000 493s 2 Sph 0.59060780 897.0209 493s > k_sf = krige(log(zinc)~1, meuse_sf[-(1:5),], meuse_sf[1:5,], v.fit) 493s [using ordinary kriging] 493s > 493s > all.equal(k_sp, as(k_sf, "Spatial"), check.attributes = FALSE) 493s [1] TRUE 493s > all.equal(k_sp, as(k_sf, "Spatial"), check.attributes = TRUE) 493s [1] "Attributes: < Component “bbox”: Attributes: < Component “dimnames”: Component 1: 2 string mismatches > >" 493s [2] "Attributes: < Component “coords”: Attributes: < Component “dimnames”: Component 2: 2 string mismatches > >" 493s [3] "Attributes: < Component “coords.nrs”: Numeric: lengths (2, 0) differ >" 493s > 493s > # 2. using stars for grid: 493s > 493s > suppressPackageStartupMessages(library(stars)) 493s > st = st_as_stars(meuse.grid) 493s > st_crs(st) 493s Coordinate Reference System: 493s User input: Amersfoort / RD New 493s wkt: 493s PROJCRS["Amersfoort / RD New", 493s BASEGEOGCRS["Amersfoort", 493s DATUM["Amersfoort", 493s ELLIPSOID["Bessel 1841",6377397.155,299.1528128, 493s LENGTHUNIT["metre",1]]], 493s PRIMEM["Greenwich",0, 493s ANGLEUNIT["degree",0.0174532925199433]], 493s ID["EPSG",4289]], 493s CONVERSION["RD New", 493s METHOD["Oblique Stereographic", 493s ID["EPSG",9809]], 493s PARAMETER["Latitude of natural origin",52.1561605555556, 493s ANGLEUNIT["degree",0.0174532925199433], 493s ID["EPSG",8801]], 493s PARAMETER["Longitude of natural origin",5.38763888888889, 493s ANGLEUNIT["degree",0.0174532925199433], 493s ID["EPSG",8802]], 493s PARAMETER["Scale factor at natural origin",0.9999079, 493s SCALEUNIT["unity",1], 493s ID["EPSG",8805]], 493s PARAMETER["False easting",155000, 493s LENGTHUNIT["metre",1], 493s ID["EPSG",8806]], 493s PARAMETER["False northing",463000, 493s LENGTHUNIT["metre",1], 493s ID["EPSG",8807]]], 493s CS[Cartesian,2], 493s AXIS["easting (X)",east, 493s ORDER[1], 493s LENGTHUNIT["metre",1]], 493s AXIS["northing (Y)",north, 493s ORDER[2], 493s LENGTHUNIT["metre",1]], 493s USAGE[ 493s SCOPE["Engineering survey, topographic mapping."], 493s AREA["Netherlands - onshore, including Waddenzee, Dutch Wadden Islands and 12-mile offshore coastal zone."], 493s BBOX[50.75,3.2,53.7,7.22]], 493s ID["EPSG",28992]] 493s > 493s > # compare inputs: 493s > sp = as(st, "Spatial") 493s > fullgrid(meuse.grid) = TRUE 493s > all.equal(sp, meuse.grid["dist"], check.attributes = FALSE) 493s [1] "Names: Lengths (5, 1) differ (string compare on first 1)" 493s [2] "Names: 1 string mismatch" 493s > all.equal(sp, meuse.grid["dist"], check.attributes = TRUE, use.names = FALSE) 493s [1] "Names: Lengths (5, 1) differ (string compare on first 1)" 493s [2] "Names: 1 string mismatch" 493s [3] "Attributes: < Component 3: Names: 1 string mismatch >" 493s [4] "Attributes: < Component 3: Length mismatch: comparison on first 1 components >" 493s [5] "Attributes: < Component 3: Component 1: Mean relative difference: 1.08298 >" 493s [6] "Attributes: < Component 4: Attributes: < Component 2: names for current but not for target > >" 493s [7] "Attributes: < Component 4: Attributes: < Component 3: names for current but not for target > >" 493s > 493s > # kriging: 493s > st_crs(st) = st_crs(meuse_sf) = NA # GDAL roundtrip messes them up! 493s > k_st = if (Sys.getenv("USER") == "travis") { 493s + try(krige(log(zinc)~1, meuse_sf, st, v.fit)) 493s + } else { 493s + krige(log(zinc)~1, meuse_sf, st, v.fit) 493s + } 494s [using ordinary kriging] 494s > k_st 494s stars object with 2 dimensions and 2 attributes 494s attribute(s): 494s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 494s var1.pred 4.7765547 5.2376293 5.5728839 5.7072287 6.1717619 7.4399911 5009 494s var1.var 0.0854949 0.1372864 0.1621838 0.1853319 0.2116152 0.5002756 5009 494s dimension(s): 494s from to offset delta x/y 494s x 1 78 178440 40 [x] 494s y 1 104 333760 -40 [y] 494s > 494s > # handle factors, when going to stars? 494s > k_sp_grd$cls = cut(k_sp_grd$var1.pred, c(0, 5, 6, 7, 8, 9)) 494s > st_as_stars(k_sp_grd) 494s stars object with 2 dimensions and 3 attributes 494s attribute(s): 494s var1.pred var1.var cls 494s Min. :4.777 Min. :0.0855 (0,5]: 316 494s 1st Qu.:5.238 1st Qu.:0.1373 (5,6]:1778 494s Median :5.573 Median :0.1622 (6,7]: 962 494s Mean :5.707 Mean :0.1853 (7,8]: 47 494s 3rd Qu.:6.172 3rd Qu.:0.2116 (8,9]: 0 494s Max. :7.440 Max. :0.5003 NA's :5009 494s NA's :5009 NA's :5009 494s dimension(s): 494s from to offset delta refsys x/y 494s x 1 78 178440 40 Amersfoort / RD New [x] 494s y 1 104 333760 -40 Amersfoort / RD New [y] 494s > if (require(raster, quietly = TRUE)) { 494s + print(st_as_stars(raster::stack(k_sp_grd))) # check 494s + print(all.equal(st_redimension(st_as_stars(k_sp_grd)), st_as_stars(raster::stack(k_sp_grd)), check.attributes=FALSE)) 494s + } 499s stars object with 3 dimensions and 1 attribute 499s attribute(s): 499s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 499s var1.pred 0.0854949 0.2116778 2 2.710347 5.237542 7.439991 15027 499s dimension(s): 499s from to offset delta refsys values 499s x 1 78 178440 40 Amersfoort / RD New NULL 499s y 1 104 333760 -40 Amersfoort / RD New NULL 499s band 1 3 NA NA NA var1.pred, var1.var , cls 499s x/y 499s x [x] 499s y [y] 499s band 499s [1] TRUE 499s > 499s > suppressPackageStartupMessages(library(spacetime)) 499s > 499s > tm = as.POSIXct("2019-02-25 15:37:24 CET") 499s > n = 4 499s > s = stars:::st_stars(list(foo = array(1:(n^3), rep(n,3))), 499s + stars:::create_dimensions(list( 499s + x = stars:::create_dimension(from = 1, to = n, offset = 10, delta = 0.5), 499s + y = stars:::create_dimension(from = 1, to = n, offset = 0, delta = -0.7), 499s + time = stars:::create_dimension(values = tm + 1:n)), 499s + raster = stars:::get_raster(dimensions = c("x", "y"))) 499s + ) 499s > s 499s stars object with 3 dimensions and 1 attribute 499s attribute(s): 499s Min. 1st Qu. Median Mean 3rd Qu. Max. 499s foo 1 16.75 32.5 32.5 48.25 64 499s dimension(s): 499s from to offset delta refsys x/y 499s x 1 4 10 0.5 NA [x] 499s y 1 4 0 -0.7 NA [y] 499s time 1 4 2019-02-25 15:37:25 UTC 1 secs POSIXct 499s > 499s > as.data.frame(s) 499s x y time foo 499s 1 10.25 -0.35 2019-02-25 15:37:25 1 499s 2 10.75 -0.35 2019-02-25 15:37:25 2 499s 3 11.25 -0.35 2019-02-25 15:37:25 3 499s 4 11.75 -0.35 2019-02-25 15:37:25 4 499s 5 10.25 -1.05 2019-02-25 15:37:25 5 499s 6 10.75 -1.05 2019-02-25 15:37:25 6 499s 7 11.25 -1.05 2019-02-25 15:37:25 7 499s 8 11.75 -1.05 2019-02-25 15:37:25 8 499s 9 10.25 -1.75 2019-02-25 15:37:25 9 499s 10 10.75 -1.75 2019-02-25 15:37:25 10 499s 11 11.25 -1.75 2019-02-25 15:37:25 11 499s 12 11.75 -1.75 2019-02-25 15:37:25 12 499s 13 10.25 -2.45 2019-02-25 15:37:25 13 499s 14 10.75 -2.45 2019-02-25 15:37:25 14 499s 15 11.25 -2.45 2019-02-25 15:37:25 15 499s 16 11.75 -2.45 2019-02-25 15:37:25 16 499s 17 10.25 -0.35 2019-02-25 15:37:26 17 499s 18 10.75 -0.35 2019-02-25 15:37:26 18 499s 19 11.25 -0.35 2019-02-25 15:37:26 19 499s 20 11.75 -0.35 2019-02-25 15:37:26 20 499s 21 10.25 -1.05 2019-02-25 15:37:26 21 499s 22 10.75 -1.05 2019-02-25 15:37:26 22 499s 23 11.25 -1.05 2019-02-25 15:37:26 23 499s 24 11.75 -1.05 2019-02-25 15:37:26 24 499s 25 10.25 -1.75 2019-02-25 15:37:26 25 499s 26 10.75 -1.75 2019-02-25 15:37:26 26 499s 27 11.25 -1.75 2019-02-25 15:37:26 27 499s 28 11.75 -1.75 2019-02-25 15:37:26 28 499s 29 10.25 -2.45 2019-02-25 15:37:26 29 499s 30 10.75 -2.45 2019-02-25 15:37:26 30 499s 31 11.25 -2.45 2019-02-25 15:37:26 31 499s 32 11.75 -2.45 2019-02-25 15:37:26 32 499s 33 10.25 -0.35 2019-02-25 15:37:27 33 499s 34 10.75 -0.35 2019-02-25 15:37:27 34 499s 35 11.25 -0.35 2019-02-25 15:37:27 35 499s 36 11.75 -0.35 2019-02-25 15:37:27 36 499s 37 10.25 -1.05 2019-02-25 15:37:27 37 499s 38 10.75 -1.05 2019-02-25 15:37:27 38 499s 39 11.25 -1.05 2019-02-25 15:37:27 39 499s 40 11.75 -1.05 2019-02-25 15:37:27 40 499s 41 10.25 -1.75 2019-02-25 15:37:27 41 499s 42 10.75 -1.75 2019-02-25 15:37:27 42 499s 43 11.25 -1.75 2019-02-25 15:37:27 43 499s 44 11.75 -1.75 2019-02-25 15:37:27 44 499s 45 10.25 -2.45 2019-02-25 15:37:27 45 499s 46 10.75 -2.45 2019-02-25 15:37:27 46 499s 47 11.25 -2.45 2019-02-25 15:37:27 47 499s 48 11.75 -2.45 2019-02-25 15:37:27 48 499s 49 10.25 -0.35 2019-02-25 15:37:28 49 499s 50 10.75 -0.35 2019-02-25 15:37:28 50 499s 51 11.25 -0.35 2019-02-25 15:37:28 51 499s 52 11.75 -0.35 2019-02-25 15:37:28 52 499s 53 10.25 -1.05 2019-02-25 15:37:28 53 499s 54 10.75 -1.05 2019-02-25 15:37:28 54 499s 55 11.25 -1.05 2019-02-25 15:37:28 55 499s 56 11.75 -1.05 2019-02-25 15:37:28 56 499s 57 10.25 -1.75 2019-02-25 15:37:28 57 499s 58 10.75 -1.75 2019-02-25 15:37:28 58 499s 59 11.25 -1.75 2019-02-25 15:37:28 59 499s 60 11.75 -1.75 2019-02-25 15:37:28 60 499s 61 10.25 -2.45 2019-02-25 15:37:28 61 499s 62 10.75 -2.45 2019-02-25 15:37:28 62 499s 63 11.25 -2.45 2019-02-25 15:37:28 63 499s 64 11.75 -2.45 2019-02-25 15:37:28 64 499s > plot(s, col = sf.colors(), axes = TRUE) 499s > (s.stfdf = as(s, "STFDF")) 499s An object of class "STFDF" 499s Slot "data": 499s foo 499s 1 1 499s 2 2 499s 3 3 499s 4 4 499s 5 5 499s 6 6 499s 7 7 499s 8 8 499s 9 9 499s 10 10 499s 11 11 499s 12 12 499s 13 13 499s 14 14 499s 15 15 499s 16 16 499s 17 17 499s 18 18 499s 19 19 499s 20 20 499s 21 21 499s 22 22 499s 23 23 499s 24 24 499s 25 25 499s 26 26 499s 27 27 499s 28 28 499s 29 29 499s 30 30 499s 31 31 499s 32 32 499s 33 33 499s 34 34 499s 35 35 499s 36 36 499s 37 37 499s 38 38 499s 39 39 499s 40 40 499s 41 41 499s 42 42 499s 43 43 499s 44 44 499s 45 45 499s 46 46 499s 47 47 499s 48 48 499s 49 49 499s 50 50 499s 51 51 499s 52 52 499s 53 53 499s 54 54 499s 55 55 499s 56 56 499s 57 57 499s 58 58 499s 59 59 499s 60 60 499s 61 61 499s 62 62 499s 63 63 499s 64 64 499s 499s Slot "sp": 499s Object of class SpatialPixels 499s Grid topology: 499s cellcentre.offset cellsize cells.dim 499s x 10.25 0.5 4 499s y -2.45 0.7 4 499s SpatialPoints: 499s x y 499s [1,] 10.25 -0.35 499s [2,] 10.75 -0.35 499s [3,] 11.25 -0.35 499s [4,] 11.75 -0.35 499s [5,] 10.25 -1.05 499s [6,] 10.75 -1.05 499s [7,] 11.25 -1.05 499s [8,] 11.75 -1.05 499s [9,] 10.25 -1.75 499s [10,] 10.75 -1.75 499s [11,] 11.25 -1.75 499s [12,] 11.75 -1.75 499s [13,] 10.25 -2.45 499s [14,] 10.75 -2.45 499s [15,] 11.25 -2.45 499s [16,] 11.75 -2.45 499s Coordinate Reference System (CRS) arguments: NA 499s 499s Slot "time": 499s timeIndex 499s 2019-02-25 15:37:25 1 499s 2019-02-25 15:37:26 2 499s 2019-02-25 15:37:27 3 499s 2019-02-25 15:37:28 4 499s 499s Slot "endTime": 499s [1] "2019-02-25 15:37:26 UTC" "2019-02-25 15:37:27 UTC" 499s [3] "2019-02-25 15:37:28 UTC" "2019-02-25 15:37:29 UTC" 499s 499s > stplot(s.stfdf, scales = list(draw = TRUE)) 500s > 500s > (s2 = st_as_stars(s.stfdf)) 500s stars object with 3 dimensions and 1 attribute 500s attribute(s): 500s Min. 1st Qu. Median Mean 3rd Qu. Max. 500s foo 1 16.75 32.5 32.5 48.25 64 500s dimension(s): 500s from to offset delta refsys x/y 500s x 1 4 10 0.5 NA [x] 500s y 1 4 -1.11e-16 -0.7 NA [y] 500s time 1 4 2019-02-25 15:37:25 UTC 1 secs POSIXct 500s > plot(s2, col = sf.colors(), axes = TRUE) 500s > all.equal(s, s2, check.attributes = FALSE) 500s [1] TRUE 500s > 500s > # multiple simulations: 500s > data(meuse, package = "sp") 500s > data(meuse.grid, package = "sp") 500s > coordinates(meuse.grid) <- ~x+y 500s > gridded(meuse.grid) <- TRUE 500s > meuse.grid = st_as_stars(meuse.grid) 500s > meuse_sf = st_as_sf(meuse, coords = c("x", "y")) 500s > g = gstat(NULL, "zinc", zinc~1, meuse_sf, model = vgm(1, "Exp", 300), nmax = 10) 500s > g = gstat(g, "lead", lead~1, meuse_sf, model = vgm(1, "Exp", 300), nmax = 10, fill.cross = TRUE) 500s > set.seed(123) 500s > ## IGNORE_RDIFF_BEGIN 500s > (p = predict(g, meuse.grid, nsim = 5)) 500s drawing 5 multivariate GLS realisations of beta... 500s [using conditional Gaussian simulation] 500s stars object with 3 dimensions and 2 attributes 500s attribute(s): 500s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 500s zinc 101.7643 199.59256 300.2140 399.8017 544.0327 1817.2057 25045 500s lead 32.7799 73.03151 107.9339 133.1725 178.8162 638.9396 25045 500s dimension(s): 500s from to offset delta values x/y 500s x 1 78 178440 40 NULL [x] 500s y 1 104 333760 -40 NULL [y] 500s sample 1 5 NA NA sim1,...,sim5 500s > ## IGNORE_RDIFF_END 500s > 500s BEGIN TEST unproj.R 500s 500s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 500s Copyright (C) 2025 The R Foundation for Statistical Computing 500s Platform: powerpc64le-unknown-linux-gnu 500s 500s R is free software and comes with ABSOLUTELY NO WARRANTY. 500s You are welcome to redistribute it under certain conditions. 500s Type 'license()' or 'licence()' for distribution details. 500s 500s R is a collaborative project with many contributors. 500s Type 'contributors()' for more information and 500s 'citation()' on how to cite R or R packages in publications. 500s 500s Type 'demo()' for some demos, 'help()' for on-line help, or 500s 'help.start()' for an HTML browser interface to help. 500s Type 'q()' to quit R. 500s 500s > # DOI 10.1007/s11004-011-9344-7 500s > # http://mypage.iu.edu/~srobeson/Pubs/variogram_sphere_mathgeo_2011.pdf 500s > 500s > suppressPackageStartupMessages(library(sp)) 500s > library(gstat) 501s > 501s > if (require(sp, quietly = TRUE) && 501s + suppressPackageStartupMessages(require(fields, quietly = TRUE)) && 501s + suppressPackageStartupMessages(require(sf, quietly = TRUE))) { 501s + data(meuse) 501s + coordinates(meuse) = ~x+y 501s + proj4string(meuse) = CRS("+init=epsg:28992") 501s + ll = "+proj=longlat +ellps=WGS84" 501s + # meuse.ll = spTransform(meuse, CRS("+proj=longlat +ellps=WGS84")) 501s + meuse.ll = as(st_transform(sf::st_as_sf(meuse), sf::st_crs(ll)), "Spatial") 501s + meuse.ll[1:10,] 501s + variogram(log(zinc)~1, meuse.ll) 501s + 501s + cloud1 = variogram(log(zinc)~1, meuse, cloud=T, cutoff=6000) 501s + cloud2 = variogram(log(zinc)~1, meuse.ll, cloud=T, cutoff=6) 501s + 501s + plot(cloud1$dist/1000, cloud2$dist, xlab="Amersfoort, km", ylab = "Long/lat") 501s + abline(0,1) 501s + 501s + data(ozone2) 501s + oz = SpatialPointsDataFrame(ozone2$lon.lat, 501s + data.frame(t(ozone2$y)), 501s + proj4string=CRS("+proj=longlat +ellps=WGS84")) 501s + variogram(X870731~1,oz[!is.na(oz$X870731),]) 501s + utm16 = "+proj=utm +zone=16" 501s + # oz.utm = spTransform(oz, utm16) 501s + oz.utm = as(sf::st_transform(sf::st_as_sf(oz), utm16) , "Spatial") 501s + variogram(X870731~1,oz.utm[!is.na(oz$X870731),]) 501s + 501s + # Timothy Hilton, r-sig-geo, Sept 14, 2008: 501s + 501s + foo <- 501s + structure(list(z = c(-1.95824831109744, -1.9158901643563, 4.22211761150161, 501s + 3.23356929459598, 1.12038389231868, 0.34613850821113, 1.12589932643631, 501s + 23.517912251617, 3.0519158690268, 3.20261431141517, -2.10947106854739 501s + ), lon = c(-125.29228, -82.1556, -98.524722, -99.948333, -104.691741, 501s + -79.420833, -105.100533, -88.291867, -72.171478, -121.556944, 501s + -89.34765), lat = c(49.87217, 48.2167, 55.905833, 56.635833, 501s + 53.916264, 39.063333, 48.307883, 40.0061, 42.537756, 44.448889, 501s + 46.242017)), .Names = c("z", "lon", "lat"), row.names = c(NA, 501s + -11L), class = "data.frame") 501s + 501s + coordinates(foo) <- ~lon+lat 501s + 501s + proj4string(foo) <- CRS('+proj=longlat +ellps=WGS84') 501s + 501s + vg.foo <- variogram(z~1, foo, cloud=TRUE, cutoff=1e10) 501s + 501s + cat('==========\nvariogram:\n') 501s + print(head(vg.foo)) 501s + 501s + cat('==========\nspDistsN1 Distances:\n') 501s + print(spDistsN1(coordinates(foo), coordinates(foo)[1,], longlat=TRUE)) 501s + } 502s ========== 502s variogram: 502s dist gamma dir.hor dir.ver id left right 502s 1 3115.1190 8.971063e-04 0 0 var1 2 1 502s 2 1908.0468 1.909846e+01 0 0 var1 3 1 502s 3 1405.6211 1.883757e+01 0 0 var1 3 2 502s 4 1837.5667 1.347749e+01 0 0 var1 4 1 502s 5 1522.8765 1.325847e+01 0 0 var1 4 2 502s 6 119.9386 4.886139e-01 0 0 var1 4 3 502s ========== 502s spDistsN1 Distances: 502s [1] 0.0000 3115.1190 1908.0468 1837.5667 1481.6293 3775.6751 1480.4477 502s [8] 3081.7541 4090.4022 665.9348 2683.1516 502s > 502s Warning message: 502s In CPL_crs_from_input(x) : 502s GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order. Further messages of this type will be suppressed. 502s BEGIN TEST variogram.R 502s 502s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 502s Copyright (C) 2025 The R Foundation for Statistical Computing 502s Platform: powerpc64le-unknown-linux-gnu 502s 502s R is free software and comes with ABSOLUTELY NO WARRANTY. 502s You are welcome to redistribute it under certain conditions. 502s Type 'license()' or 'licence()' for distribution details. 502s 502s R is a collaborative project with many contributors. 502s Type 'contributors()' for more information and 502s 'citation()' on how to cite R or R packages in publications. 502s 502s Type 'demo()' for some demos, 'help()' for on-line help, or 502s 'help.start()' for an HTML browser interface to help. 502s Type 'q()' to quit R. 502s 502s > library(sp) 502s > library(gstat) 503s > data(meuse) 503s > variogram(log(zinc)~1, ~x+y, meuse) 503s np dist gamma dir.hor dir.ver id 503s 1 57 79.29244 0.1234479 0 0 var1 503s 2 299 163.97367 0.2162185 0 0 var1 503s 3 419 267.36483 0.3027859 0 0 var1 503s 4 457 372.73542 0.4121448 0 0 var1 503s 5 547 478.47670 0.4634128 0 0 var1 503s 6 533 585.34058 0.5646933 0 0 var1 503s 7 574 693.14526 0.5689683 0 0 var1 503s 8 564 796.18365 0.6186769 0 0 var1 503s 9 589 903.14650 0.6471479 0 0 var1 503s 10 543 1011.29177 0.6915705 0 0 var1 503s 11 500 1117.86235 0.7033984 0 0 var1 503s 12 477 1221.32810 0.6038770 0 0 var1 503s 13 452 1329.16407 0.6517158 0 0 var1 503s 14 457 1437.25620 0.5665318 0 0 var1 503s 15 415 1543.20248 0.5748227 0 0 var1 503s > 503s > coordinates(meuse) <- ~ x + y 503s > variogram(log(zinc)~1, meuse) 503s np dist gamma dir.hor dir.ver id 503s 1 57 79.29244 0.1234479 0 0 var1 503s 2 299 163.97367 0.2162185 0 0 var1 503s 3 419 267.36483 0.3027859 0 0 var1 503s 4 457 372.73542 0.4121448 0 0 var1 503s 5 547 478.47670 0.4634128 0 0 var1 503s 6 533 585.34058 0.5646933 0 0 var1 503s 7 574 693.14526 0.5689683 0 0 var1 503s 8 564 796.18365 0.6186769 0 0 var1 503s 9 589 903.14650 0.6471479 0 0 var1 503s 10 543 1011.29177 0.6915705 0 0 var1 503s 11 500 1117.86235 0.7033984 0 0 var1 503s 12 477 1221.32810 0.6038770 0 0 var1 503s 13 452 1329.16407 0.6517158 0 0 var1 503s 14 457 1437.25620 0.5665318 0 0 var1 503s 15 415 1543.20248 0.5748227 0 0 var1 503s > 503s > ind=seq(1,155,2) 503s > var1= meuse[ind,] 503s > var2= meuse[-ind,] 503s > g <- gstat(NULL, id = "lead", form = lead ~ 1, data=var1) 503s > g <- gstat(g, id = "zinc", form = zinc ~ 1, data=var2) 503s > v.cross <- variogram(g) 503s > plot(v.cross) 503s > 503s > 503s BEGIN TEST vdist.R 503s 503s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 503s Copyright (C) 2025 The R Foundation for Statistical Computing 503s Platform: powerpc64le-unknown-linux-gnu 503s 503s R is free software and comes with ABSOLUTELY NO WARRANTY. 503s You are welcome to redistribute it under certain conditions. 503s Type 'license()' or 'licence()' for distribution details. 503s 503s R is a collaborative project with many contributors. 503s Type 'contributors()' for more information and 503s 'citation()' on how to cite R or R packages in publications. 503s 503s Type 'demo()' for some demos, 'help()' for on-line help, or 503s 'help.start()' for an HTML browser interface to help. 503s Type 'q()' to quit R. 503s 503s > library(sp) 503s > library(gstat) 503s > 503s > data(meuse) 503s > coordinates(meuse) = ~x+y 503s > data(meuse.grid) 504s > gridded(meuse.grid) = ~x+y 504s > 504s > mg = meuse.grid 504s > gridded(mg) = FALSE 504s > mg= mg[1500,] 504s > krige(log(zinc)~1,meuse,mg,vgm(1, "Exp", 300, anis=c(0,0.01)), 504s + vdist=FALSE, maxdist=1000, nmax = 9) 504s [using ordinary kriging] 504s coordinates var1.pred var1.var 504s 1500 (180260, 331300) 5.024413 1.114475 504s > 504s > ## IGNORE_RDIFF_BEGIN 504s > krige(log(zinc)~1,meuse,mg,vgm(1, "Exp", 300, anis=c(0,0.01)), 504s + vdist=TRUE, maxdist=1000, nmax = 9) 504s [using ordinary kriging] 504s coordinates var1.pred var1.var 504s 1500 (180260, 331300) 5.568531 1.112945 504s > ## IGNORE_RDIFF_END 504s > 504s autopkgtest [23:34:05]: test run-unit-test: -----------------------] 504s run-unit-test PASS 504s autopkgtest [23:34:05]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 505s autopkgtest [23:34:06]: test pkg-r-autopkgtest: preparing testbed 505s Reading package lists... 505s Building dependency tree... 505s Reading state information... 505s Solving dependencies... 505s The following NEW packages will be installed: 505s build-essential cpp cpp-15 cpp-15-powerpc64le-linux-gnu 505s cpp-powerpc64le-linux-gnu dctrl-tools g++ g++-15 505s g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-15 505s gcc-15-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-15 505s gfortran-15-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 505s icu-devtools libasan8 libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 505s libcrypt-dev libdeflate-dev libgcc-15-dev libgfortran-15-dev libicu-dev 505s libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev 505s liblsan0 liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 505s libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libquadmath0 505s libreadline-dev libstdc++-15-dev libtirpc-dev libtsan2 libubsan1 libzstd-dev 505s linux-libc-dev pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev 505s r-cran-backports r-cran-base64url r-cran-batchtools r-cran-brew 505s r-cran-checkmate r-cran-crayon r-cran-data.table r-cran-fs 505s r-cran-future.batchtools r-cran-hms r-cran-pkgconfig r-cran-prettyunits 505s r-cran-progress r-cran-rappdirs r-cran-stringi rpcsvc-proto zlib1g-dev 505s 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. 505s Need to get 110 MB of archives. 505s After this operation, 400 MB of additional disk space will be used. 505s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc-dev-bin ppc64el 2.42-2ubuntu4 [23.9 kB] 505s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el linux-libc-dev ppc64el 6.19.0-3.3 [1832 kB] 508s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcrypt-dev ppc64el 1:4.5.1-1 [162 kB] 508s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el rpcsvc-proto ppc64el 1.4.3-1build1 [84.2 kB] 508s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc6-dev ppc64el 2.42-2ubuntu4 [2080 kB] 512s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libisl23 ppc64el 0.27-1build1 [893 kB] 514s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmpc3 ppc64el 1.3.1-2 [62.5 kB] 514s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [11.4 MB] 534s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15 ppc64el 15.2.0-12ubuntu1 [1038 B] 534s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [5746 B] 534s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp ppc64el 4:15.2.0-4ubuntu1 [22.4 kB] 534s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcc1-0 ppc64el 15.2.0-12ubuntu1 [49.0 kB] 534s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el libitm1 ppc64el 15.2.0-12ubuntu1 [32.2 kB] 534s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el libasan8 ppc64el 15.2.0-12ubuntu1 [3006 kB] 539s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblsan0 ppc64el 15.2.0-12ubuntu1 [1374 kB] 543s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtsan2 ppc64el 15.2.0-12ubuntu1 [2729 kB] 550s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libubsan1 ppc64el 15.2.0-12ubuntu1 [1231 kB] 552s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el libquadmath0 ppc64el 15.2.0-12ubuntu1 [160 kB] 552s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgcc-15-dev ppc64el 15.2.0-12ubuntu1 [1670 kB] 555s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [22.4 MB] 599s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15 ppc64el 15.2.0-12ubuntu1 [530 kB] 600s Get:22 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1220 B] 600s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc ppc64el 4:15.2.0-4ubuntu1 [5032 B] 600s Get:24 http://ftpmaster.internal/ubuntu resolute/main ppc64el libstdc++-15-dev ppc64el 15.2.0-12ubuntu1 [2747 kB] 606s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [13.0 MB] 633s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15 ppc64el 15.2.0-12ubuntu1 [25.3 kB] 633s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [970 B] 633s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++ ppc64el 4:15.2.0-4ubuntu1 [1092 B] 633s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el build-essential ppc64el 12.12ubuntu2 [5256 B] 633s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el dctrl-tools ppc64el 2.24-3build4 [108 kB] 633s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran-15-dev ppc64el 15.2.0-12ubuntu1 [651 kB] 634s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [12.3 MB] 657s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-15 ppc64el 15.2.0-12ubuntu1 [18.1 kB] 657s Get:34 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1020 B] 657s Get:35 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran ppc64el 4:15.2.0-4ubuntu1 [1166 B] 657s Get:36 http://ftpmaster.internal/ubuntu resolute/main ppc64el icu-devtools ppc64el 78.2-1ubuntu1 [246 kB] 657s Get:37 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas-dev ppc64el 3.12.1-7ubuntu1 [306 kB] 657s Get:38 http://ftpmaster.internal/ubuntu resolute/main ppc64el libbz2-dev ppc64el 1.0.8-6build2 [50.0 kB] 657s Get:39 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate-dev ppc64el 1.23-2build1 [71.8 kB] 657s Get:40 http://ftpmaster.internal/ubuntu resolute/main ppc64el libicu-dev ppc64el 78.2-1ubuntu1 [13.3 MB] 686s Get:41 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-4ubuntu3 [358 kB] 686s Get:42 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 686s Get:43 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 686s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack-dev ppc64el 3.12.1-7ubuntu1 [6357 kB] 697s Get:45 http://ftpmaster.internal/ubuntu resolute/main ppc64el libncurses-dev ppc64el 6.6+20251231-1 [505 kB] 697s Get:46 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-16-0 ppc64el 10.46-1 [292 kB] 697s Get:47 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-32-0 ppc64el 10.46-1 [275 kB] 697s Get:48 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-posix3 ppc64el 10.46-1 [7334 B] 697s Get:49 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-dev ppc64el 10.46-1 [937 kB] 698s Get:50 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpkgconf3 ppc64el 1.8.1-4build1 [37.9 kB] 698s Get:51 http://ftpmaster.internal/ubuntu resolute/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [903 kB] 700s Get:52 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpng-dev ppc64el 1.6.54-1 [326 kB] 700s Get:53 http://ftpmaster.internal/ubuntu resolute/main ppc64el libreadline-dev ppc64el 8.3-3 [252 kB] 700s Get:54 http://ftpmaster.internal/ubuntu resolute/main ppc64el libzstd-dev ppc64el 1.5.7+dfsg-3 [528 kB] 701s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblzma-dev ppc64el 5.8.2-2 [210 kB] 701s Get:56 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf-bin ppc64el 1.8.1-4build1 [22.7 kB] 701s Get:57 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf ppc64el 1.8.1-4build1 [16.8 kB] 701s Get:58 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtirpc-dev ppc64el 1.3.6+ds-1 [223 kB] 701s Get:59 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-dev all 4.5.2-1ubuntu2 [1880 B] 701s Get:60 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pkg-r-autopkgtest all 20250812 [6158 B] 701s Get:61 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-backports ppc64el 1.5.0-2 [122 kB] 701s Get:62 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-base64url ppc64el 1.4-2build2 [28.3 kB] 701s Get:63 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-brew all 1.0-10-1 [77.7 kB] 701s Get:64 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-checkmate ppc64el 2.3.2-1 [714 kB] 702s Get:65 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-data.table ppc64el 1.17.0+dfsg-1 [2197 kB] 706s Get:66 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fs ppc64el 1.6.5+dfsg-1 [248 kB] 706s Get:67 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-crayon all 1.5.3-1 [165 kB] 706s Get:68 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 706s Get:69 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-hms all 1.1.4-1 [102 kB] 706s Get:70 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 706s Get:71 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 706s Get:72 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1build1 [49.4 kB] 706s Get:73 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-stringi ppc64el 1.8.4-1build2 [947 kB] 708s Get:74 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-batchtools ppc64el 0.9.17+dfsg-1 [713 kB] 709s Get:75 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-future.batchtools all 0.12.1+dfsg-1 [185 kB] 709s Fetched 110 MB in 3min 24s (538 kB/s) 709s Selecting previously unselected package libc-dev-bin. 709s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 130684 files and directories currently installed.) 709s Preparing to unpack .../00-libc-dev-bin_2.42-2ubuntu4_ppc64el.deb ... 709s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 709s Selecting previously unselected package linux-libc-dev:ppc64el. 709s Preparing to unpack .../01-linux-libc-dev_6.19.0-3.3_ppc64el.deb ... 709s Unpacking linux-libc-dev:ppc64el (6.19.0-3.3) ... 709s Selecting previously unselected package libcrypt-dev:ppc64el. 709s Preparing to unpack .../02-libcrypt-dev_1%3a4.5.1-1_ppc64el.deb ... 709s Unpacking libcrypt-dev:ppc64el (1:4.5.1-1) ... 709s Selecting previously unselected package rpcsvc-proto. 709s Preparing to unpack .../03-rpcsvc-proto_1.4.3-1build1_ppc64el.deb ... 709s Unpacking rpcsvc-proto (1.4.3-1build1) ... 709s Selecting previously unselected package libc6-dev:ppc64el. 709s Preparing to unpack .../04-libc6-dev_2.42-2ubuntu4_ppc64el.deb ... 709s Unpacking libc6-dev:ppc64el (2.42-2ubuntu4) ... 709s Selecting previously unselected package libisl23:ppc64el. 709s Preparing to unpack .../05-libisl23_0.27-1build1_ppc64el.deb ... 709s Unpacking libisl23:ppc64el (0.27-1build1) ... 709s Selecting previously unselected package libmpc3:ppc64el. 709s Preparing to unpack .../06-libmpc3_1.3.1-2_ppc64el.deb ... 709s Unpacking libmpc3:ppc64el (1.3.1-2) ... 709s Selecting previously unselected package cpp-15-powerpc64le-linux-gnu. 709s Preparing to unpack .../07-cpp-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 709s Unpacking cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package cpp-15. 710s Preparing to unpack .../08-cpp-15_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 710s Preparing to unpack .../09-cpp-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 710s Unpacking cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 710s Selecting previously unselected package cpp. 710s Preparing to unpack .../10-cpp_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 710s Unpacking cpp (4:15.2.0-4ubuntu1) ... 710s Selecting previously unselected package libcc1-0:ppc64el. 710s Preparing to unpack .../11-libcc1-0_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package libitm1:ppc64el. 710s Preparing to unpack .../12-libitm1_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libitm1:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package libasan8:ppc64el. 710s Preparing to unpack .../13-libasan8_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libasan8:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package liblsan0:ppc64el. 710s Preparing to unpack .../14-liblsan0_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking liblsan0:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package libtsan2:ppc64el. 710s Preparing to unpack .../15-libtsan2_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libtsan2:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package libubsan1:ppc64el. 710s Preparing to unpack .../16-libubsan1_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libubsan1:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package libquadmath0:ppc64el. 710s Preparing to unpack .../17-libquadmath0_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package libgcc-15-dev:ppc64el. 710s Preparing to unpack .../18-libgcc-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package gcc-15-powerpc64le-linux-gnu. 710s Preparing to unpack .../19-gcc-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package gcc-15. 710s Preparing to unpack .../20-gcc-15_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 710s Preparing to unpack .../21-gcc-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 710s Unpacking gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 710s Selecting previously unselected package gcc. 710s Preparing to unpack .../22-gcc_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 710s Unpacking gcc (4:15.2.0-4ubuntu1) ... 710s Selecting previously unselected package libstdc++-15-dev:ppc64el. 710s Preparing to unpack .../23-libstdc++-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 710s Selecting previously unselected package g++-15-powerpc64le-linux-gnu. 710s Preparing to unpack .../24-g++-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 710s Unpacking g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 711s Selecting previously unselected package g++-15. 711s Preparing to unpack .../25-g++-15_15.2.0-12ubuntu1_ppc64el.deb ... 711s Unpacking g++-15 (15.2.0-12ubuntu1) ... 711s Selecting previously unselected package g++-powerpc64le-linux-gnu. 711s Preparing to unpack .../26-g++-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 711s Unpacking g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 711s Selecting previously unselected package g++. 711s Preparing to unpack .../27-g++_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 711s Unpacking g++ (4:15.2.0-4ubuntu1) ... 711s Selecting previously unselected package build-essential. 711s Preparing to unpack .../28-build-essential_12.12ubuntu2_ppc64el.deb ... 711s Unpacking build-essential (12.12ubuntu2) ... 711s Selecting previously unselected package dctrl-tools. 711s Preparing to unpack .../29-dctrl-tools_2.24-3build4_ppc64el.deb ... 711s Unpacking dctrl-tools (2.24-3build4) ... 711s Selecting previously unselected package libgfortran-15-dev:ppc64el. 711s Preparing to unpack .../30-libgfortran-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 711s Unpacking libgfortran-15-dev:ppc64el (15.2.0-12ubuntu1) ... 711s Selecting previously unselected package gfortran-15-powerpc64le-linux-gnu. 711s Preparing to unpack .../31-gfortran-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 711s Unpacking gfortran-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 711s Selecting previously unselected package gfortran-15. 711s Preparing to unpack .../32-gfortran-15_15.2.0-12ubuntu1_ppc64el.deb ... 711s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 711s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 711s Preparing to unpack .../33-gfortran-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 711s Unpacking gfortran-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 711s Selecting previously unselected package gfortran. 711s Preparing to unpack .../34-gfortran_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 711s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 711s Selecting previously unselected package icu-devtools. 711s Preparing to unpack .../35-icu-devtools_78.2-1ubuntu1_ppc64el.deb ... 711s Unpacking icu-devtools (78.2-1ubuntu1) ... 711s Selecting previously unselected package libblas-dev:ppc64el. 711s Preparing to unpack .../36-libblas-dev_3.12.1-7ubuntu1_ppc64el.deb ... 711s Unpacking libblas-dev:ppc64el (3.12.1-7ubuntu1) ... 711s Selecting previously unselected package libbz2-dev:ppc64el. 711s Preparing to unpack .../37-libbz2-dev_1.0.8-6build2_ppc64el.deb ... 711s Unpacking libbz2-dev:ppc64el (1.0.8-6build2) ... 711s Selecting previously unselected package libdeflate-dev:ppc64el. 711s Preparing to unpack .../38-libdeflate-dev_1.23-2build1_ppc64el.deb ... 711s Unpacking libdeflate-dev:ppc64el (1.23-2build1) ... 711s Selecting previously unselected package libicu-dev:ppc64el. 711s Preparing to unpack .../39-libicu-dev_78.2-1ubuntu1_ppc64el.deb ... 711s Unpacking libicu-dev:ppc64el (78.2-1ubuntu1) ... 711s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 711s Preparing to unpack .../40-libjpeg-turbo8-dev_2.1.5-4ubuntu3_ppc64el.deb ... 711s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-4ubuntu3) ... 711s Selecting previously unselected package libjpeg8-dev:ppc64el. 711s Preparing to unpack .../41-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 711s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 712s Selecting previously unselected package libjpeg-dev:ppc64el. 712s Preparing to unpack .../42-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 712s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 712s Selecting previously unselected package liblapack-dev:ppc64el. 712s Preparing to unpack .../43-liblapack-dev_3.12.1-7ubuntu1_ppc64el.deb ... 712s Unpacking liblapack-dev:ppc64el (3.12.1-7ubuntu1) ... 712s Selecting previously unselected package libncurses-dev:ppc64el. 712s Preparing to unpack .../44-libncurses-dev_6.6+20251231-1_ppc64el.deb ... 712s Unpacking libncurses-dev:ppc64el (6.6+20251231-1) ... 712s Selecting previously unselected package libpcre2-16-0:ppc64el. 712s Preparing to unpack .../45-libpcre2-16-0_10.46-1_ppc64el.deb ... 712s Unpacking libpcre2-16-0:ppc64el (10.46-1) ... 712s Selecting previously unselected package libpcre2-32-0:ppc64el. 712s Preparing to unpack .../46-libpcre2-32-0_10.46-1_ppc64el.deb ... 712s Unpacking libpcre2-32-0:ppc64el (10.46-1) ... 712s Selecting previously unselected package libpcre2-posix3:ppc64el. 712s Preparing to unpack .../47-libpcre2-posix3_10.46-1_ppc64el.deb ... 712s Unpacking libpcre2-posix3:ppc64el (10.46-1) ... 712s Selecting previously unselected package libpcre2-dev:ppc64el. 712s Preparing to unpack .../48-libpcre2-dev_10.46-1_ppc64el.deb ... 712s Unpacking libpcre2-dev:ppc64el (10.46-1) ... 712s Selecting previously unselected package libpkgconf3:ppc64el. 712s Preparing to unpack .../49-libpkgconf3_1.8.1-4build1_ppc64el.deb ... 712s Unpacking libpkgconf3:ppc64el (1.8.1-4build1) ... 712s Selecting previously unselected package zlib1g-dev:ppc64el. 712s Preparing to unpack .../50-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_ppc64el.deb ... 712s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 712s Selecting previously unselected package libpng-dev:ppc64el. 712s Preparing to unpack .../51-libpng-dev_1.6.54-1_ppc64el.deb ... 712s Unpacking libpng-dev:ppc64el (1.6.54-1) ... 712s Selecting previously unselected package libreadline-dev:ppc64el. 712s Preparing to unpack .../52-libreadline-dev_8.3-3_ppc64el.deb ... 712s Unpacking libreadline-dev:ppc64el (8.3-3) ... 712s Selecting previously unselected package libzstd-dev:ppc64el. 712s Preparing to unpack .../53-libzstd-dev_1.5.7+dfsg-3_ppc64el.deb ... 712s Unpacking libzstd-dev:ppc64el (1.5.7+dfsg-3) ... 712s Selecting previously unselected package liblzma-dev:ppc64el. 712s Preparing to unpack .../54-liblzma-dev_5.8.2-2_ppc64el.deb ... 712s Unpacking liblzma-dev:ppc64el (5.8.2-2) ... 712s Selecting previously unselected package pkgconf-bin. 712s Preparing to unpack .../55-pkgconf-bin_1.8.1-4build1_ppc64el.deb ... 712s Unpacking pkgconf-bin (1.8.1-4build1) ... 712s Selecting previously unselected package pkgconf:ppc64el. 712s Preparing to unpack .../56-pkgconf_1.8.1-4build1_ppc64el.deb ... 712s Unpacking pkgconf:ppc64el (1.8.1-4build1) ... 712s Selecting previously unselected package libtirpc-dev:ppc64el. 712s Preparing to unpack .../57-libtirpc-dev_1.3.6+ds-1_ppc64el.deb ... 712s Unpacking libtirpc-dev:ppc64el (1.3.6+ds-1) ... 712s Selecting previously unselected package r-base-dev. 712s Preparing to unpack .../58-r-base-dev_4.5.2-1ubuntu2_all.deb ... 712s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 712s Selecting previously unselected package pkg-r-autopkgtest. 712s Preparing to unpack .../59-pkg-r-autopkgtest_20250812_all.deb ... 712s Unpacking pkg-r-autopkgtest (20250812) ... 712s Selecting previously unselected package r-cran-backports. 712s Preparing to unpack .../60-r-cran-backports_1.5.0-2_ppc64el.deb ... 712s Unpacking r-cran-backports (1.5.0-2) ... 712s Selecting previously unselected package r-cran-base64url. 712s Preparing to unpack .../61-r-cran-base64url_1.4-2build2_ppc64el.deb ... 712s Unpacking r-cran-base64url (1.4-2build2) ... 712s Selecting previously unselected package r-cran-brew. 712s Preparing to unpack .../62-r-cran-brew_1.0-10-1_all.deb ... 712s Unpacking r-cran-brew (1.0-10-1) ... 712s Selecting previously unselected package r-cran-checkmate. 712s Preparing to unpack .../63-r-cran-checkmate_2.3.2-1_ppc64el.deb ... 712s Unpacking r-cran-checkmate (2.3.2-1) ... 712s Selecting previously unselected package r-cran-data.table. 712s Preparing to unpack .../64-r-cran-data.table_1.17.0+dfsg-1_ppc64el.deb ... 712s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 712s Selecting previously unselected package r-cran-fs. 712s Preparing to unpack .../65-r-cran-fs_1.6.5+dfsg-1_ppc64el.deb ... 712s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 712s Selecting previously unselected package r-cran-crayon. 712s Preparing to unpack .../66-r-cran-crayon_1.5.3-1_all.deb ... 712s Unpacking r-cran-crayon (1.5.3-1) ... 712s Selecting previously unselected package r-cran-pkgconfig. 712s Preparing to unpack .../67-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 712s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 712s Selecting previously unselected package r-cran-hms. 712s Preparing to unpack .../68-r-cran-hms_1.1.4-1_all.deb ... 712s Unpacking r-cran-hms (1.1.4-1) ... 712s Selecting previously unselected package r-cran-prettyunits. 712s Preparing to unpack .../69-r-cran-prettyunits_1.2.0-1_all.deb ... 712s Unpacking r-cran-prettyunits (1.2.0-1) ... 712s Selecting previously unselected package r-cran-progress. 712s Preparing to unpack .../70-r-cran-progress_1.2.3-1_all.deb ... 712s Unpacking r-cran-progress (1.2.3-1) ... 712s Selecting previously unselected package r-cran-rappdirs. 712s Preparing to unpack .../71-r-cran-rappdirs_0.3.3-1build1_ppc64el.deb ... 712s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 712s Selecting previously unselected package r-cran-stringi. 712s Preparing to unpack .../72-r-cran-stringi_1.8.4-1build2_ppc64el.deb ... 712s Unpacking r-cran-stringi (1.8.4-1build2) ... 712s Selecting previously unselected package r-cran-batchtools. 712s Preparing to unpack .../73-r-cran-batchtools_0.9.17+dfsg-1_ppc64el.deb ... 712s Unpacking r-cran-batchtools (0.9.17+dfsg-1) ... 712s Selecting previously unselected package r-cran-future.batchtools. 712s Preparing to unpack .../74-r-cran-future.batchtools_0.12.1+dfsg-1_all.deb ... 712s Unpacking r-cran-future.batchtools (0.12.1+dfsg-1) ... 712s Setting up r-cran-fs (1.6.5+dfsg-1) ... 712s Setting up libzstd-dev:ppc64el (1.5.7+dfsg-3) ... 712s Setting up r-cran-backports (1.5.0-2) ... 712s Setting up r-cran-prettyunits (1.2.0-1) ... 712s Setting up linux-libc-dev:ppc64el (6.19.0-3.3) ... 712s Setting up r-cran-checkmate (2.3.2-1) ... 712s Setting up r-cran-data.table (1.17.0+dfsg-1) ... 712s Setting up libpcre2-16-0:ppc64el (10.46-1) ... 712s Setting up r-cran-pkgconfig (2.0.3-2build2) ... 712s Setting up libpcre2-32-0:ppc64el (10.46-1) ... 712s Setting up r-cran-brew (1.0-10-1) ... 712s Setting up libtirpc-dev:ppc64el (1.3.6+ds-1) ... 712s Setting up libpkgconf3:ppc64el (1.8.1-4build1) ... 712s Setting up rpcsvc-proto (1.4.3-1build1) ... 712s Setting up r-cran-stringi (1.8.4-1build2) ... 712s Setting up libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 712s Setting up r-cran-hms (1.1.4-1) ... 712s Setting up r-cran-crayon (1.5.3-1) ... 712s Setting up libmpc3:ppc64el (1.3.1-2) ... 712s Setting up icu-devtools (78.2-1ubuntu1) ... 712s Setting up pkgconf-bin (1.8.1-4build1) ... 712s Setting up liblzma-dev:ppc64el (5.8.2-2) ... 712s Setting up libubsan1:ppc64el (15.2.0-12ubuntu1) ... 712s Setting up libpcre2-posix3:ppc64el (10.46-1) ... 712s Setting up libcrypt-dev:ppc64el (1:4.5.1-1) ... 712s Setting up libasan8:ppc64el (15.2.0-12ubuntu1) ... 712s Setting up libtsan2:ppc64el (15.2.0-12ubuntu1) ... 712s Setting up libisl23:ppc64el (0.27-1build1) ... 712s Setting up libc-dev-bin (2.42-2ubuntu4) ... 712s Setting up libdeflate-dev:ppc64el (1.23-2build1) ... 712s Setting up r-cran-progress (1.2.3-1) ... 712s Setting up libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 712s Setting up r-cran-rappdirs (0.3.3-1build1) ... 712s Setting up liblsan0:ppc64el (15.2.0-12ubuntu1) ... 712s Setting up libblas-dev:ppc64el (3.12.1-7ubuntu1) ... 712s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode 712s Setting up dctrl-tools (2.24-3build4) ... 713s Setting up libitm1:ppc64el (15.2.0-12ubuntu1) ... 713s Setting up r-cran-base64url (1.4-2build2) ... 713s Setting up libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 713s Setting up libgfortran-15-dev:ppc64el (15.2.0-12ubuntu1) ... 713s Setting up pkgconf:ppc64el (1.8.1-4build1) ... 713s Setting up cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 713s Setting up liblapack-dev:ppc64el (3.12.1-7ubuntu1) ... 713s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode 713s Setting up cpp-15 (15.2.0-12ubuntu1) ... 713s Setting up r-cran-batchtools (0.9.17+dfsg-1) ... 713s Setting up libc6-dev:ppc64el (2.42-2ubuntu4) ... 713s Setting up libicu-dev:ppc64el (78.2-1ubuntu1) ... 713s Setting up cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 713s Setting up libbz2-dev:ppc64el (1.0.8-6build2) ... 713s Setting up libjpeg-turbo8-dev:ppc64el (2.1.5-4ubuntu3) ... 713s Setting up libncurses-dev:ppc64el (6.6+20251231-1) ... 713s Setting up libpcre2-dev:ppc64el (10.46-1) ... 713s Setting up gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 713s Setting up libreadline-dev:ppc64el (8.3-3) ... 713s Setting up gcc-15 (15.2.0-12ubuntu1) ... 713s Setting up libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 713s Setting up gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 713s Setting up r-cran-future.batchtools (0.12.1+dfsg-1) ... 713s Setting up gfortran-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 713s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 713s Setting up cpp (4:15.2.0-4ubuntu1) ... 713s Setting up libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 713s Setting up gfortran-15 (15.2.0-12ubuntu1) ... 713s Setting up g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 713s Setting up libpng-dev:ppc64el (1.6.54-1) ... 713s Setting up libjpeg-dev:ppc64el (8c-2ubuntu11) ... 713s Setting up gcc (4:15.2.0-4ubuntu1) ... 713s Setting up gfortran-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 713s Setting up g++-15 (15.2.0-12ubuntu1) ... 713s Setting up g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 713s Setting up gfortran (4:15.2.0-4ubuntu1) ... 713s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 713s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 713s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 713s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 713s Setting up g++ (4:15.2.0-4ubuntu1) ... 713s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 713s Setting up build-essential (12.12ubuntu2) ... 713s Setting up r-base-dev (4.5.2-1ubuntu2) ... 713s Setting up pkg-r-autopkgtest (20250812) ... 713s Processing triggers for libc-bin (2.42-2ubuntu4) ... 713s Processing triggers for man-db (2.13.1-1build1) ... 714s Processing triggers for install-info (7.2-5) ... 715s autopkgtest [23:37:36]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 715s autopkgtest [23:37:36]: test pkg-r-autopkgtest: [----------------------- 715s Test: Try to load the R library gstat 715s 715s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 715s Copyright (C) 2025 The R Foundation for Statistical Computing 715s Platform: powerpc64le-unknown-linux-gnu 715s 715s R is free software and comes with ABSOLUTELY NO WARRANTY. 715s You are welcome to redistribute it under certain conditions. 715s Type 'license()' or 'licence()' for distribution details. 715s 715s R is a collaborative project with many contributors. 715s Type 'contributors()' for more information and 715s 'citation()' on how to cite R or R packages in publications. 715s 715s Type 'demo()' for some demos, 'help()' for on-line help, or 715s 'help.start()' for an HTML browser interface to help. 715s Type 'q()' to quit R. 715s 715s > library('gstat') 716s > 716s autopkgtest [23:37:37]: test pkg-r-autopkgtest: -----------------------] 716s pkg-r-autopkgtest PASS 716s autopkgtest [23:37:37]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 717s autopkgtest [23:37:38]: @@@@@@@@@@@@@@@@@@@@ summary 717s run-unit-test PASS 717s pkg-r-autopkgtest PASS