0s autopkgtest [22:40:45]: starting date and time: 2026-02-09 22:40:45+0000 0s autopkgtest [22:40:45]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [22:40:45]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vo1atuja/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lattice --apt-upgrade r-cran-adegraphics --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lattice/0.22-9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-ppc64el-29.secgroup --name adt-resolute-ppc64el-r-cran-adegraphics-20260209-224045-juju-7f2275-prod-proposed-migration-environment-15-7621aaa6-4d71-45c1-a1ed-4b4da72cbcc4 --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 5s Creating nova instance adt-resolute-ppc64el-r-cran-adegraphics-20260209-224045-juju-7f2275-prod-proposed-migration-environment-15-7621aaa6-4d71-45c1-a1ed-4b4da72cbcc4 from image adt/ubuntu-resolute-ppc64el-server-20260209.img (UUID f7f31435-4cd1-4090-aa55-59cfefa097ca)... 141s autopkgtest [22:43:06]: testbed dpkg architecture: ppc64el 141s autopkgtest [22:43:06]: testbed apt version: 3.1.15 142s autopkgtest [22:43:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 142s autopkgtest [22:43:07]: testbed release detected to be: None 142s autopkgtest [22:43:07]: updating testbed package index (apt update) 143s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 144s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 144s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 144s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 144s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 144s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 145s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 145s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [246 kB] 145s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1534 kB] 148s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [19.4 kB] 148s Fetched 3774 kB in 5s (690 kB/s) 149s Reading package lists... 149s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 150s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 150s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 150s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 150s Reading package lists... 150s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Calculating upgrade... 151s The following packages will be upgraded: 151s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 151s libip6tc2 libxtables12 wget 151s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Need to get 3125 kB of archives. 151s After this operation, 78.8 kB of additional disk space will be used. 151s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el iptables ppc64el 1.8.11-2ubuntu3 [464 kB] 151s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip4tc2 ppc64el 1.8.11-2ubuntu3 [27.8 kB] 151s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip6tc2 ppc64el 1.8.11-2ubuntu3 [28.2 kB] 151s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxtables12 ppc64el 1.8.11-2ubuntu3 [41.2 kB] 151s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el iproute2 ppc64el 6.18.0-1ubuntu1 [1458 kB] 153s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcryptsetup12 ppc64el 2:2.8.0-1ubuntu3 [404 kB] 153s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el wget ppc64el 1.25.0-2ubuntu4 [401 kB] 153s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cryptsetup-bin ppc64el 2:2.8.0-1ubuntu3 [250 kB] 153s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el dracut-install ppc64el 109-11ubuntu1 [51.3 kB] 153s dpkg-preconfigure: unable to re-open stdin: No such file or directory 153s Fetched 3125 kB in 2s (1368 kB/s) 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122003 files and directories currently installed.) 154s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_ppc64el.deb ... 154s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 154s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_ppc64el.deb ... 154s Unpacking libip4tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 154s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_ppc64el.deb ... 154s Unpacking libip6tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 154s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_ppc64el.deb ... 154s Unpacking libxtables12:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 154s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_ppc64el.deb ... 155s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 155s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 155s Unpacking libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 155s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_ppc64el.deb ... 155s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 156s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 156s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 156s Preparing to unpack .../8-dracut-install_109-11ubuntu1_ppc64el.deb ... 156s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 156s Setting up libip4tc2:ppc64el (1.8.11-2ubuntu3) ... 156s Setting up wget (1.25.0-2ubuntu4) ... 156s Setting up libip6tc2:ppc64el (1.8.11-2ubuntu3) ... 156s Setting up libxtables12:ppc64el (1.8.11-2ubuntu3) ... 156s Setting up dracut-install (109-11ubuntu1) ... 156s Setting up libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) ... 156s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 156s Setting up iptables (1.8.11-2ubuntu3) ... 157s Setting up iproute2 (6.18.0-1ubuntu1) ... 157s Processing triggers for man-db (2.13.1-1build1) ... 161s Processing triggers for install-info (7.2-5) ... 161s Processing triggers for libc-bin (2.42-2ubuntu4) ... 161s autopkgtest [22:43:26]: upgrading testbed (apt dist-upgrade and autopurge) 162s Reading package lists... 162s Building dependency tree... 162s Reading state information... 162s Calculating upgrade... 162s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 162s Reading package lists... 162s Building dependency tree... 162s Reading state information... 162s Solving dependencies... 162s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s autopkgtest [22:43:29]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:13:51 UTC 2026 165s autopkgtest [22:43:30]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-adegraphics 172s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-adegraphics 1.0-22-1 (dsc) [2404 B] 172s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-adegraphics 1.0-22-1 (tar) [2847 kB] 172s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-adegraphics 1.0-22-1 (diff) [3500 B] 173s gpgv: Signature made Thu Dec 11 02:52:52 2025 UTC 173s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 173s gpgv: issuer "plessy@debian.org" 173s gpgv: Can't check signature: No public key 173s dpkg-source: warning: cannot verify inline signature for ./r-cran-adegraphics_1.0-22-1.dsc: no acceptable signature found 173s autopkgtest [22:43:38]: testing package r-cran-adegraphics version 1.0-22-1 173s autopkgtest [22:43:38]: build not needed 175s autopkgtest [22:43:40]: test run-unit-test: preparing testbed 175s Reading package lists... 175s Building dependency tree... 175s Reading state information... 175s Solving dependencies... 176s The following NEW packages will be installed: 176s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 176s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data 176s gdal-plugins javascript-common libabsl20260107 libaec0 libaom3 176s libarmadillo15 libarpack2t64 libavif16 libblas3 libblosc1 libcairo2 176s libcfitsio10t64 libdatrie1 libdav1d7 libde265-0 libdeflate0 libfontconfig1 176s libfreexl1 libfyba0t64 libgav1-2 libgdal38 libgeos-c1t64 libgeos3.14.1 176s libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 176s libharfbuzz0b libhdf4-0 libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 176s libheif-plugin-libde265 libheif1 libhwy1t64 libice6 libjbig0 libjpeg-turbo8 176s libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 176s libjs-highlight.js libjs-jquery libjs-jquery-datatables 176s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 176s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 176s libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 libkmlbase1t64 176s libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 176s liblua5.4-0 libminizip1t64 libmuparser2v5 libmysqlclient24 libnetcdf22 176s libnlopt0 libodbc2 libodbcinst2 libopenjp2-7 libpango-1.0-0 176s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 176s libpoppler147 libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 176s libsnappy1v5 libspatialite8t64 libsuperlu7 libsz2 libtcl8.6 libthai-data 176s libthai0 libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 176s libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 176s libxss1 libxt6t64 libyuv0 mysql-common node-bootstrap-sass node-html5shiv 176s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 176s r-cran-ade4 r-cran-adegraphics r-cran-backports r-cran-base64enc r-cran-boot 176s r-cran-broom r-cran-bslib r-cran-cachem r-cran-car r-cran-cardata 176s r-cran-caret r-cran-class r-cran-classint r-cran-cli r-cran-clock 176s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-conquer 176s r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table 176s r-cran-dbi r-cran-deldir r-cran-deriv r-cran-diagram r-cran-digest 176s r-cran-doby r-cran-dplyr r-cran-e1071 r-cran-evaluate r-cran-fansi 176s r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-foreach 176s r-cran-forecast r-cran-formula r-cran-fracdiff r-cran-fs r-cran-future 176s r-cran-future.apply r-cran-generics r-cran-ggplot2 r-cran-globals 176s r-cran-glue r-cran-gower r-cran-gtable r-cran-guerry r-cran-hardhat 176s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-interp r-cran-ipred 176s r-cran-isoband r-cran-iterators r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 176s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 176s r-cran-latticeextra r-cran-lava r-cran-lifecycle r-cran-listenv 176s r-cran-littler r-cran-lme4 r-cran-lmtest r-cran-lubridate r-cran-magrittr 176s r-cran-markdown r-cran-mass r-cran-matrix r-cran-matrixmodels 176s r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-microbenchmark 176s r-cran-mime r-cran-minqa r-cran-modelmetrics r-cran-modelr r-cran-nlme 176s r-cran-nloptr r-cran-nnet r-cran-numderiv r-cran-parallelly r-cran-pbkrtest 176s r-cran-pillar r-cran-pixmap r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr 176s r-cran-png r-cran-proc r-cran-prodlim r-cran-progressr r-cran-promises 176s r-cran-proxy r-cran-purrr r-cran-quadprog r-cran-quantmod r-cran-quantreg 176s r-cran-r6 r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 176s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rdpack r-cran-recipes 176s r-cran-reformulas r-cran-reshape2 r-cran-rlang r-cran-rmarkdown r-cran-rpart 176s r-cran-s2 r-cran-sass r-cran-scales r-cran-sf r-cran-shape r-cran-shiny 176s r-cran-sourcetools r-cran-sp r-cran-sparsem r-cran-sparsevctrs r-cran-spdata 176s r-cran-spdep r-cran-squarem r-cran-statmod r-cran-stringi r-cran-stringr 176s r-cran-survival r-cran-tibble r-cran-tidyr r-cran-tidyselect 176s r-cran-timechange r-cran-timedate r-cran-tinytex r-cran-tseries r-cran-ttr 176s r-cran-tzdb r-cran-units r-cran-urca r-cran-utf8 r-cran-vctrs 176s r-cran-viridislite r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable 176s r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip x11-common xdg-utils 176s zip 176s 0 upgraded, 292 newly installed, 0 to remove and 0 not upgraded. 176s Need to get 279 MB of archives. 176s After this operation, 867 MB of additional disk space will be used. 176s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-mono all 2.37-8build1 [502 kB] 176s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-core all 2.37-8build1 [834 kB] 178s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig-config ppc64el 2.17.1-3ubuntu1 [38.5 kB] 178s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libfontconfig1 ppc64el 2.17.1-3ubuntu1 [193 kB] 178s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig ppc64el 2.17.1-3ubuntu1 [182 kB] 178s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 179s Get:7 http://ftpmaster.internal/ubuntu resolute/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 179s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 182s Get:9 http://ftpmaster.internal/ubuntu resolute/universe ppc64el gdal-data all 3.12.1+dfsg-1 [278 kB] 182s Get:10 http://ftpmaster.internal/ubuntu resolute/universe ppc64el gdal-plugins ppc64el 3.12.1+dfsg-1 [26.8 kB] 182s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el javascript-common all 12+nmu1build1 [4864 B] 182s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libabsl20260107 ppc64el 20260107.0-1 [729 kB] 183s Get:13 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libaec0 ppc64el 1.1.5-1 [29.7 kB] 183s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el libaom3 ppc64el 3.13.1-2 [2908 kB] 188s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas3 ppc64el 3.12.1-7ubuntu1 [291 kB] 188s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran5 ppc64el 15.2.0-12ubuntu1 [620 kB] 189s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack3 ppc64el 3.12.1-7ubuntu1 [2960 kB] 193s Get:18 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libarpack2t64 ppc64el 3.9.1-6 [107 kB] 193s Get:19 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsuperlu7 ppc64el 7.0.1+dfsg1-2 [237 kB] 193s Get:20 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libarmadillo15 ppc64el 1:15.2.1+dfsg-2 [114 kB] 193s Get:21 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libdav1d7 ppc64el 1.5.3-1 [600 kB] 194s Get:22 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgav1-2 ppc64el 0.20.0-2build1 [897 kB] 196s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-4ubuntu3 [214 kB] 196s Get:24 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 196s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el libyuv0 ppc64el 0.0.1922.20260106-1 [267 kB] 196s Get:26 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libavif16 ppc64el 1.3.0-1ubuntu3 [160 kB] 196s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsnappy1v5 ppc64el 1.2.2-2 [33.5 kB] 196s Get:28 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libblosc1 ppc64el 1.21.5+ds-2 [35.0 kB] 196s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpixman-1-0 ppc64el 0.46.4-1 [347 kB] 196s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-render0 ppc64el 1.17.0-2ubuntu1 [17.4 kB] 196s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-shm0 ppc64el 1.17.0-2ubuntu1 [6072 B] 196s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxrender1 ppc64el 1:0.9.12-1 [23.0 kB] 196s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcairo2 ppc64el 1.18.4-3 [759 kB] 197s Get:34 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libcfitsio10t64 ppc64el 4.6.3-1 [751 kB] 199s Get:35 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdatrie1 ppc64el 0.2.14-1 [22.7 kB] 199s Get:36 http://ftpmaster.internal/ubuntu resolute/main ppc64el libde265-0 ppc64el 1.0.16-1build1 [300 kB] 199s Get:37 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate0 ppc64el 1.23-2build1 [64.1 kB] 199s Get:38 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libfyba0t64 ppc64el 4.1.1-11build2 [149 kB] 199s Get:39 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libminizip1t64 ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [25.7 kB] 199s Get:40 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libfreexl1 ppc64el 2.0.0-1build3 [54.0 kB] 199s Get:41 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgeos3.14.1 ppc64el 3.14.1-2 [1129 kB] 201s Get:42 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgeos-c1t64 ppc64el 3.14.1-2 [124 kB] 201s Get:43 http://ftpmaster.internal/ubuntu resolute/universe ppc64el proj-data all 9.7.1-1 [7950 kB] 213s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu3 [37.1 kB] 213s Get:45 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu2 [315 kB] 213s Get:46 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1build1 [24.7 kB] 213s Get:47 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebp7 ppc64el 1.5.0-0.1build1 [330 kB] 213s Get:48 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu3 [307 kB] 213s Get:49 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libproj25 ppc64el 9.7.1-1 [1580 kB] 215s Get:50 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgeotiff5 ppc64el 1.7.4-1build1 [64.7 kB] 215s Get:51 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgif7 ppc64el 5.2.2-1ubuntu3 [40.9 kB] 215s Get:52 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsz2 ppc64el 1.1.5-1 [25.3 kB] 215s Get:53 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf4-0 ppc64el 4.3.1-2 [339 kB] 215s Get:54 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-310 ppc64el 1.14.6+repack-2 [1545 kB] 218s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif-plugin-aomdec ppc64el 1.21.2-1 [14.4 kB] 218s Get:56 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif-plugin-libde265 ppc64el 1.21.2-1 [10.2 kB] 218s Get:57 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif1 ppc64el 1.21.2-1 [657 kB] 219s Get:58 http://ftpmaster.internal/ubuntu resolute/main ppc64el libhwy1t64 ppc64el 1.3.0-2 [251 kB] 219s Get:59 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblcms2-2 ppc64el 2.17-1 [246 kB] 219s Get:60 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjxl0.11 ppc64el 0.11.1-6ubuntu1 [1411 kB] 221s Get:61 http://ftpmaster.internal/ubuntu resolute/universe ppc64el liburiparser1 ppc64el 0.9.8+dfsg-2 [52.7 kB] 221s Get:62 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libkmlbase1t64 ppc64el 1.3.0-13 [58.1 kB] 221s Get:63 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libkmldom1t64 ppc64el 1.3.0-13 [168 kB] 221s Get:64 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libkmlengine1t64 ppc64el 1.3.0-13 [78.7 kB] 221s Get:65 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-12ubuntu1 [169 kB] 221s Get:66 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libmuparser2v5 ppc64el 2.3.4-2 [143 kB] 221s Get:67 http://ftpmaster.internal/ubuntu resolute/main ppc64el mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 221s Get:68 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmysqlclient24 ppc64el 8.4.8-0ubuntu1 [1304 kB] 223s Get:69 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-hl-310 ppc64el 1.14.6+repack-2 [76.3 kB] 223s Get:70 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libnetcdf22 ppc64el 1:4.9.3-1build1 [690 kB] 224s Get:71 http://ftpmaster.internal/ubuntu resolute/main ppc64el libltdl7 ppc64el 2.5.4-9 [51.5 kB] 224s Get:72 http://ftpmaster.internal/ubuntu resolute/main ppc64el libodbc2 ppc64el 2.3.14-1 [192 kB] 224s Get:73 http://ftpmaster.internal/ubuntu resolute/main ppc64el unixodbc-common all 2.3.14-1 [8792 B] 224s Get:74 http://ftpmaster.internal/ubuntu resolute/main ppc64el libodbcinst2 ppc64el 2.3.14-1 [39.3 kB] 224s Get:75 http://ftpmaster.internal/ubuntu resolute/main ppc64el libopenjp2-7 ppc64el 2.5.4-1 [251 kB] 224s Get:76 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgpgmepp6t64 ppc64el 1.24.2-3ubuntu2 [135 kB] 224s Get:77 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpoppler147 ppc64el 25.03.0-11.1 [1442 kB] 226s Get:78 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpq5 ppc64el 18.1-2 [198 kB] 226s Get:79 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libqhull-r8.0 ppc64el 2020.2-8 [227 kB] 226s Get:80 http://ftpmaster.internal/ubuntu resolute/universe ppc64el librttopo1 ppc64el 1.1.0-4build1 [237 kB] 226s Get:81 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libspatialite8t64 ppc64el 5.1.0-3ubuntu1 [2237 kB] 229s Get:82 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libxerces-c3.2t64 ppc64el 3.2.4+debian-1.3build2 [1098 kB] 231s Get:83 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgdal38 ppc64el 3.12.1+dfsg-1 [12.7 MB] 252s Get:84 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgraphite2-3 ppc64el 1.3.14-11ubuntu1 [85.3 kB] 252s Get:85 http://ftpmaster.internal/ubuntu resolute/main ppc64el libharfbuzz0b ppc64el 12.3.2-1 [663 kB] 254s Get:86 http://ftpmaster.internal/ubuntu resolute/main ppc64el x11-common all 1:7.7+24ubuntu1 [22.4 kB] 254s Get:87 http://ftpmaster.internal/ubuntu resolute/main ppc64el libice6 ppc64el 2:1.1.1-1build1 [51.9 kB] 254s Get:88 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 254s Get:89 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 254s Get:90 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 254s Get:91 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-d3 all 3.5.17-4build1 [136 kB] 254s Get:92 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 254s Get:93 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 254s Get:94 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 254s Get:95 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 254s Get:96 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 254s Get:97 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 254s Get:98 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 254s Get:99 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 254s Get:100 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 254s Get:101 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 254s Get:102 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblua5.4-0 ppc64el 5.4.8-1 [213 kB] 254s Get:103 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai-data all 0.1.30-1 [155 kB] 254s Get:104 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai0 ppc64el 0.1.30-1 [22.5 kB] 254s Get:105 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpango-1.0-0 ppc64el 1.57.0-1 [283 kB] 254s Get:106 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangoft2-1.0-0 ppc64el 1.57.0-1 [61.2 kB] 254s Get:107 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangocairo-1.0-0 ppc64el 1.57.0-1 [31.0 kB] 254s Get:108 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper2 ppc64el 2.2.5-0.3build1 [18.1 kB] 254s Get:109 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper-utils ppc64el 2.2.5-0.3build1 [15.7 kB] 254s Get:110 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsm6 ppc64el 2:1.2.6-1build1 [18.6 kB] 254s Get:111 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtcl8.6 ppc64el 8.6.17+dfsg-1build1 [1239 kB] 256s Get:112 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxft2 ppc64el 2.3.6-1build2 [61.6 kB] 256s Get:113 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxss1 ppc64el 1:1.2.3-1build4 [7470 B] 256s Get:114 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtk8.6 ppc64el 8.6.17-1 [968 kB] 258s Get:115 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libudunits2-data all 2.2.28-8 [19.3 kB] 258s Get:116 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libudunits2-0 ppc64el 2.2.28-8 [66.4 kB] 258s Get:117 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.3 [203 kB] 258s Get:118 http://ftpmaster.internal/ubuntu resolute/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 258s Get:119 http://ftpmaster.internal/ubuntu resolute/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 258s Get:120 http://ftpmaster.internal/ubuntu resolute/universe ppc64el node-normalize.css all 8.0.1-5.1 [10.4 kB] 258s Get:121 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pandoc-data all 3.1.11.1-3build1 [78.8 kB] 258s Get:122 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pandoc ppc64el 3.1.11.1+ds-4 [30.9 MB] 307s Get:123 http://ftpmaster.internal/ubuntu resolute/main ppc64el zip ppc64el 3.0-15ubuntu3 [198 kB] 307s Get:124 http://ftpmaster.internal/ubuntu resolute/main ppc64el unzip ppc64el 6.0-29ubuntu1 [200 kB] 307s Get:125 http://ftpmaster.internal/ubuntu resolute/main ppc64el xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 307s Get:126 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-core ppc64el 4.5.2-1ubuntu2 [29.3 MB] 376s Get:127 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-abind all 1.4-8-1build1 [67.0 kB] 377s Get:128 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mass ppc64el 7.3-65-1 [1116 kB] 379s Get:129 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pixmap all 0.4-14-1 [217 kB] 379s Get:130 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el r-cran-lattice ppc64el 0.22-9-1 [1399 kB] 382s Get:131 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sp ppc64el 1:2.2-0+dfsg-1 [1446 kB] 384s Get:132 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-littler ppc64el 0.3.22-1 [85.5 kB] 384s Get:133 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 384s Get:134 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcpp ppc64el 1.1.0-1 [2037 kB] 388s Get:135 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcpparmadillo ppc64el 15.2.3-1-1 [935 kB] 389s Get:136 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-ade4 ppc64el 1.7-23-1 [5415 kB] 398s Get:137 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-kernsmooth ppc64el 2.23-26-1build1 [96.8 kB] 398s Get:138 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-png ppc64el 0.1-8-1build2 [44.3 kB] 398s Get:139 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-jpeg ppc64el 0.1-10-1 [37.0 kB] 398s Get:140 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 398s Get:141 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-deldir ppc64el 2.0-4-1build1 [273 kB] 398s Get:142 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-matrix ppc64el 1.7-4-1 [4584 kB] 406s Get:143 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcppeigen ppc64el 0.3.4.0.2-1 [1477 kB] 408s Get:144 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-interp ppc64el 1.1-6-1 [1492 kB] 411s Get:145 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-latticeextra all 0.6-31-1 [2177 kB] 415s Get:146 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-adegraphics all 1.0-22-1 [3298 kB] 423s Get:147 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-backports ppc64el 1.5.0-2 [122 kB] 423s Get:148 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3build1 [29.3 kB] 423s Get:149 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-boot all 1.3-32-1 [636 kB] 424s Get:150 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cli ppc64el 3.6.4-1 [1411 kB] 426s Get:151 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-generics all 0.1.4-1 [84.0 kB] 426s Get:152 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-glue ppc64el 1.8.0-1 [165 kB] 426s Get:153 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rlang ppc64el 1.1.5-3 [1738 kB] 429s Get:154 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 429s Get:155 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 429s Get:156 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 429s Get:157 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 431s Get:158 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 431s Get:159 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-r6 all 2.6.1-1 [101 kB] 431s Get:160 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fansi ppc64el 1.0.6-2 [637 kB] 432s Get:161 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 432s Get:162 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-3 [420 kB] 432s Get:163 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-withr all 3.0.2+dfsg-1 [214 kB] 432s Get:164 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tidyselect ppc64el 1.2.1+dfsg-1 [222 kB] 432s Get:165 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dplyr ppc64el 1.1.4-4 [1542 kB] 435s Get:166 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-purrr ppc64el 1.0.4-1 [555 kB] 436s Get:167 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-stringi ppc64el 1.8.4-1build2 [947 kB] 437s Get:168 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 437s Get:169 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cpp11 all 0.5.3-1 [242 kB] 437s Get:170 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 440s Get:171 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-broom all 1.0.12+dfsg-1 [1708 kB] 444s Get:172 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fastmap ppc64el 1.2.0-1 [75.0 kB] 444s Get:173 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cachem ppc64el 1.1.0-1 [74.1 kB] 444s Get:174 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-digest ppc64el 0.6.39-1 [238 kB] 444s Get:175 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-htmltools ppc64el 0.5.8.1-1 [373 kB] 444s Get:176 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 444s Get:177 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-jsonlite ppc64el 1.9.1+dfsg-1 [452 kB] 444s Get:178 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-memoise all 2.0.1-1build1 [54.5 kB] 444s Get:179 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mime ppc64el 0.12-2 [35.9 kB] 444s Get:180 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fs ppc64el 1.6.5+dfsg-1 [248 kB] 444s Get:181 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1build1 [49.4 kB] 444s Get:182 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sass ppc64el 0.4.9+dfsg-1 [1034 kB] 445s Get:183 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 453s Get:184 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cardata all 3.0.6-1 [1687 kB] 456s Get:185 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-formula all 1.2-5-1 [158 kB] 456s Get:186 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-nlme ppc64el 3.1.168-1 [2327 kB] 460s Get:187 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mgcv ppc64el 1.9-4-1 [3694 kB] 466s Get:188 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-nnet ppc64el 7.3-20-1 [119 kB] 466s Get:189 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-minqa ppc64el 1.2.8-1 [141 kB] 466s Get:190 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libnlopt0 ppc64el 2.7.1-7ubuntu1 [292 kB] 466s Get:191 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-nloptr ppc64el 2.2.1-2 [251 kB] 466s Get:192 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rbibutils ppc64el 2.3-1 [1047 kB] 468s Get:193 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rdpack all 2.6.3-1 [636 kB] 469s Get:194 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-reformulas all 0.4.4-1 [151 kB] 469s Get:195 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-statmod ppc64el 1.5.0-1 [298 kB] 469s Get:196 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lme4 ppc64el 1.1-38-1 [4220 kB] 476s Get:197 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-numderiv all 2016.8-1.1-3build1 [116 kB] 476s Get:198 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 476s Get:199 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 478s Get:200 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-farver ppc64el 2.1.2-1 [1389 kB] 482s Get:201 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 482s Get:202 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-viridislite all 0.4.3-1 [1088 kB] 484s Get:203 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-scales all 1.4.0-1 [725 kB] 486s Get:204 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 494s Get:205 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cowplot all 1.1.3+dfsg-1 [614 kB] 495s Get:206 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-deriv all 4.2.0-1 [154 kB] 495s Get:207 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-colorspace ppc64el 2.1-1+dfsg-1 [1570 kB] 497s Get:208 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fracdiff ppc64el 1.5-3-1 [118 kB] 498s Get:209 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-zoo ppc64el 1.8-15-1 [1028 kB] 500s Get:210 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lmtest ppc64el 0.9.40-1build1 [401 kB] 500s Get:211 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-timedate ppc64el 4052.112-1 [1299 kB] 502s Get:212 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-quadprog ppc64el 1.5-8-1build2 [38.8 kB] 502s Get:213 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xts ppc64el 0.14.1-1 [1209 kB] 504s Get:214 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-curl ppc64el 7.0.0+dfsg-1 [205 kB] 504s Get:215 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-ttr ppc64el 0.24.4-1 [516 kB] 504s Get:216 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-quantmod all 0.4.28-1 [1037 kB] 506s Get:217 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tseries ppc64el 0.10-59-3 [390 kB] 506s Get:218 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-urca ppc64el 1.3-4-1build1 [1056 kB] 508s Get:219 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-forecast ppc64el 8.23.0-1 [1598 kB] 511s Get:220 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-modelr all 0.1.11-1 [195 kB] 511s Get:221 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-microbenchmark ppc64el 1.5.0-1 [67.9 kB] 511s Get:222 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-doby all 4.7.1-3 [4741 kB] 519s Get:223 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-evaluate all 1.0.5-1 [117 kB] 520s Get:224 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xfun ppc64el 0.55+dfsg-1 [589 kB] 521s Get:225 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-highr all 0.11+dfsg-1 [38.5 kB] 521s Get:226 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-yaml ppc64el 2.3.10-1 [123 kB] 521s Get:227 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 537s Get:228 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-knitr all 1.51+dfsg-1 [847 kB] 538s Get:229 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pbkrtest all 0.5.5-1 [217 kB] 538s Get:230 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sparsem ppc64el 1.84-2-1 [832 kB] 540s Get:231 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-matrixmodels all 0.5-4-1 [351 kB] 540s Get:232 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-survival ppc64el 3.8-6-1 [8312 kB] 552s Get:233 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-matrixstats ppc64el 1.5.0-1 [578 kB] 553s Get:234 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-class ppc64el 7.3-23-1 [94.5 kB] 553s Get:235 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-proxy ppc64el 0.4-27-1 [185 kB] 553s Get:236 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-e1071 ppc64el 1.7-17-1 [595 kB] 554s Get:237 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-codetools all 0.2-20-1build1 [91.1 kB] 554s Get:238 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-iterators all 1.0.14-1build1 [336 kB] 554s Get:239 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-foreach all 1.5.2-1build1 [124 kB] 554s Get:240 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-data.table ppc64el 1.17.0+dfsg-1 [2197 kB] 558s Get:241 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-modelmetrics ppc64el 1.2.2.2-1build2 [147 kB] 558s Get:242 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-plyr ppc64el 1.8.9-1 [834 kB] 560s Get:243 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-proc ppc64el 1.18.5-1 [965 kB] 562s Get:244 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tzdb ppc64el 0.5.0-1 [540 kB] 564s Get:245 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-clock ppc64el 0.7.2-1 [1910 kB] 568s Get:246 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-gower ppc64el 1.0.2-1 [211 kB] 568s Get:247 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sparsevctrs ppc64el 0.2.0-2 [172 kB] 568s Get:248 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-hardhat all 1.4.2+dfsg-1 [596 kB] 569s Get:249 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rpart ppc64el 4.1.24-1build1 [678 kB] 570s Get:250 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-shape all 1.4.6.1-1 [749 kB] 571s Get:251 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-diagram all 1.6.5-2 [656 kB] 572s Get:252 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-globals all 0.19.0-1 [160 kB] 572s Get:253 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 572s Get:254 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-parallelly ppc64el 1.42.0-1 [540 kB] 573s Get:255 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-future all 1.34.0+dfsg-1 [646 kB] 574s Get:256 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 574s Get:257 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-progressr all 0.15.1-1 [353 kB] 574s Get:258 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-squarem all 2021.1-1build1 [180 kB] 574s Get:259 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lava all 1.8.2+dfsg-1 [2210 kB] 578s Get:260 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-prodlim ppc64el 2024.06.25-1 [420 kB] 578s Get:261 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-ipred ppc64el 0.9-15-1 [386 kB] 578s Get:262 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-timechange ppc64el 0.3.0-2 [211 kB] 578s Get:263 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lubridate ppc64el 1.9.4+dfsg-1 [1011 kB] 580s Get:264 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-recipes all 1.1.0+dfsg-1 [2035 kB] 583s Get:265 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-reshape2 ppc64el 1.4.4-2build2 [124 kB] 583s Get:266 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-caret ppc64el 7.0-1+dfsg-1 [3461 kB] 589s Get:267 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-conquer ppc64el 1.3.3-1 [468 kB] 589s Get:268 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-quantreg ppc64el 6.1-1 [1463 kB] 593s Get:269 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-car all 3.1-5-1 [1526 kB] 596s Get:270 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-classint ppc64el 0.4-11+dfsg-1 [109 kB] 596s Get:271 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-commonmark ppc64el 1.9.5-1 [142 kB] 596s Get:272 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-crayon all 1.5.3-1 [165 kB] 596s Get:273 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dbi all 1.2.3-1build1 [855 kB] 600s Get:274 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fontawesome all 0.5.3-1 [1331 kB] 604s Get:275 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-guerry all 1.8.3-1 [1230 kB] 607s Get:276 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-later ppc64el 1.4.1+dfsg-1 [153 kB] 607s Get:277 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-promises ppc64el 1.3.2+dfsg-1 [297 kB] 607s Get:278 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-httpuv ppc64el 1.6.15+dfsg-1 [521 kB] 607s Get:279 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-markdown all 1.13-1 [162 kB] 607s Get:280 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tinytex all 0.58-1 [148 kB] 607s Get:281 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-modernizr all 3.13.0-0.1build1 [100 kB] 607s Get:282 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xtable all 1:1.8-4-2build1 [691 kB] 608s Get:283 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 608s Get:284 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 608s Get:285 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 617s Get:286 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 619s Get:287 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-wk ppc64el 0.9.4-1 [1815 kB] 622s Get:288 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-s2 ppc64el 1.1.9-1build1 [1919 kB] 625s Get:289 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-units ppc64el 0.8-7+dfsg-2 [295 kB] 625s Get:290 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sf ppc64el 1.0-19+dfsg-2build2 [3287 kB] 632s Get:291 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-spdata all 2.3.4-1 [3684 kB] 638s Get:292 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-spdep ppc64el 1.3-5+dfsg-1 [2171 kB] 644s Preconfiguring packages ... 644s Fetched 279 MB in 7min 48s (597 kB/s) 644s Selecting previously unselected package fonts-dejavu-mono. 644s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122006 files and directories currently installed.) 644s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ... 644s Unpacking fonts-dejavu-mono (2.37-8build1) ... 644s Selecting previously unselected package fonts-dejavu-core. 644s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ... 644s Unpacking fonts-dejavu-core (2.37-8build1) ... 644s Selecting previously unselected package fontconfig-config. 644s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_ppc64el.deb ... 644s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 644s Selecting previously unselected package libfontconfig1:ppc64el. 644s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_ppc64el.deb ... 644s Unpacking libfontconfig1:ppc64el (2.17.1-3ubuntu1) ... 644s Selecting previously unselected package fontconfig. 644s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_ppc64el.deb ... 644s Unpacking fontconfig (2.17.1-3ubuntu1) ... 644s Selecting previously unselected package fonts-font-awesome. 644s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 644s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 644s Selecting previously unselected package fonts-glyphicons-halflings. 644s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 644s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 644s Selecting previously unselected package fonts-mathjax. 644s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 644s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 644s Selecting previously unselected package gdal-data. 644s Preparing to unpack .../008-gdal-data_3.12.1+dfsg-1_all.deb ... 644s Unpacking gdal-data (3.12.1+dfsg-1) ... 644s Selecting previously unselected package gdal-plugins:ppc64el. 644s Preparing to unpack .../009-gdal-plugins_3.12.1+dfsg-1_ppc64el.deb ... 644s Unpacking gdal-plugins:ppc64el (3.12.1+dfsg-1) ... 644s Selecting previously unselected package javascript-common. 644s Preparing to unpack .../010-javascript-common_12+nmu1build1_all.deb ... 644s Unpacking javascript-common (12+nmu1build1) ... 644s Selecting previously unselected package libabsl20260107:ppc64el. 644s Preparing to unpack .../011-libabsl20260107_20260107.0-1_ppc64el.deb ... 644s Unpacking libabsl20260107:ppc64el (20260107.0-1) ... 644s Selecting previously unselected package libaec0:ppc64el. 644s Preparing to unpack .../012-libaec0_1.1.5-1_ppc64el.deb ... 644s Unpacking libaec0:ppc64el (1.1.5-1) ... 644s Selecting previously unselected package libaom3:ppc64el. 644s Preparing to unpack .../013-libaom3_3.13.1-2_ppc64el.deb ... 644s Unpacking libaom3:ppc64el (3.13.1-2) ... 644s Selecting previously unselected package libblas3:ppc64el. 644s Preparing to unpack .../014-libblas3_3.12.1-7ubuntu1_ppc64el.deb ... 644s Unpacking libblas3:ppc64el (3.12.1-7ubuntu1) ... 644s Selecting previously unselected package libgfortran5:ppc64el. 644s Preparing to unpack .../015-libgfortran5_15.2.0-12ubuntu1_ppc64el.deb ... 644s Unpacking libgfortran5:ppc64el (15.2.0-12ubuntu1) ... 644s Selecting previously unselected package liblapack3:ppc64el. 645s Preparing to unpack .../016-liblapack3_3.12.1-7ubuntu1_ppc64el.deb ... 645s Unpacking liblapack3:ppc64el (3.12.1-7ubuntu1) ... 645s Selecting previously unselected package libarpack2t64:ppc64el. 645s Preparing to unpack .../017-libarpack2t64_3.9.1-6_ppc64el.deb ... 645s Unpacking libarpack2t64:ppc64el (3.9.1-6) ... 645s Selecting previously unselected package libsuperlu7:ppc64el. 645s Preparing to unpack .../018-libsuperlu7_7.0.1+dfsg1-2_ppc64el.deb ... 645s Unpacking libsuperlu7:ppc64el (7.0.1+dfsg1-2) ... 645s Selecting previously unselected package libarmadillo15. 645s Preparing to unpack .../019-libarmadillo15_1%3a15.2.1+dfsg-2_ppc64el.deb ... 645s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 645s Selecting previously unselected package libdav1d7:ppc64el. 645s Preparing to unpack .../020-libdav1d7_1.5.3-1_ppc64el.deb ... 645s Unpacking libdav1d7:ppc64el (1.5.3-1) ... 645s Selecting previously unselected package libgav1-2:ppc64el. 645s Preparing to unpack .../021-libgav1-2_0.20.0-2build1_ppc64el.deb ... 645s Unpacking libgav1-2:ppc64el (0.20.0-2build1) ... 645s Selecting previously unselected package libjpeg-turbo8:ppc64el. 645s Preparing to unpack .../022-libjpeg-turbo8_2.1.5-4ubuntu3_ppc64el.deb ... 645s Unpacking libjpeg-turbo8:ppc64el (2.1.5-4ubuntu3) ... 645s Selecting previously unselected package libjpeg8:ppc64el. 645s Preparing to unpack .../023-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 645s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 645s Selecting previously unselected package libyuv0:ppc64el. 645s Preparing to unpack .../024-libyuv0_0.0.1922.20260106-1_ppc64el.deb ... 645s Unpacking libyuv0:ppc64el (0.0.1922.20260106-1) ... 645s Selecting previously unselected package libavif16:ppc64el. 645s Preparing to unpack .../025-libavif16_1.3.0-1ubuntu3_ppc64el.deb ... 645s Unpacking libavif16:ppc64el (1.3.0-1ubuntu3) ... 645s Selecting previously unselected package libsnappy1v5:ppc64el. 645s Preparing to unpack .../026-libsnappy1v5_1.2.2-2_ppc64el.deb ... 645s Unpacking libsnappy1v5:ppc64el (1.2.2-2) ... 645s Selecting previously unselected package libblosc1:ppc64el. 645s Preparing to unpack .../027-libblosc1_1.21.5+ds-2_ppc64el.deb ... 645s Unpacking libblosc1:ppc64el (1.21.5+ds-2) ... 645s Selecting previously unselected package libpixman-1-0:ppc64el. 645s Preparing to unpack .../028-libpixman-1-0_0.46.4-1_ppc64el.deb ... 645s Unpacking libpixman-1-0:ppc64el (0.46.4-1) ... 645s Selecting previously unselected package libxcb-render0:ppc64el. 645s Preparing to unpack .../029-libxcb-render0_1.17.0-2ubuntu1_ppc64el.deb ... 645s Unpacking libxcb-render0:ppc64el (1.17.0-2ubuntu1) ... 645s Selecting previously unselected package libxcb-shm0:ppc64el. 645s Preparing to unpack .../030-libxcb-shm0_1.17.0-2ubuntu1_ppc64el.deb ... 645s Unpacking libxcb-shm0:ppc64el (1.17.0-2ubuntu1) ... 645s Selecting previously unselected package libxrender1:ppc64el. 645s Preparing to unpack .../031-libxrender1_1%3a0.9.12-1_ppc64el.deb ... 645s Unpacking libxrender1:ppc64el (1:0.9.12-1) ... 645s Selecting previously unselected package libcairo2:ppc64el. 645s Preparing to unpack .../032-libcairo2_1.18.4-3_ppc64el.deb ... 645s Unpacking libcairo2:ppc64el (1.18.4-3) ... 645s Selecting previously unselected package libcfitsio10t64:ppc64el. 645s Preparing to unpack .../033-libcfitsio10t64_4.6.3-1_ppc64el.deb ... 645s Unpacking libcfitsio10t64:ppc64el (4.6.3-1) ... 645s Selecting previously unselected package libdatrie1:ppc64el. 645s Preparing to unpack .../034-libdatrie1_0.2.14-1_ppc64el.deb ... 645s Unpacking libdatrie1:ppc64el (0.2.14-1) ... 645s Selecting previously unselected package libde265-0:ppc64el. 645s Preparing to unpack .../035-libde265-0_1.0.16-1build1_ppc64el.deb ... 645s Unpacking libde265-0:ppc64el (1.0.16-1build1) ... 645s Selecting previously unselected package libdeflate0:ppc64el. 645s Preparing to unpack .../036-libdeflate0_1.23-2build1_ppc64el.deb ... 645s Unpacking libdeflate0:ppc64el (1.23-2build1) ... 645s Selecting previously unselected package libfyba0t64:ppc64el. 645s Preparing to unpack .../037-libfyba0t64_4.1.1-11build2_ppc64el.deb ... 645s Unpacking libfyba0t64:ppc64el (4.1.1-11build2) ... 645s Selecting previously unselected package libminizip1t64:ppc64el. 645s Preparing to unpack .../038-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_ppc64el.deb ... 645s Unpacking libminizip1t64:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 645s Selecting previously unselected package libfreexl1:ppc64el. 645s Preparing to unpack .../039-libfreexl1_2.0.0-1build3_ppc64el.deb ... 645s Unpacking libfreexl1:ppc64el (2.0.0-1build3) ... 645s Selecting previously unselected package libgeos3.14.1:ppc64el. 645s Preparing to unpack .../040-libgeos3.14.1_3.14.1-2_ppc64el.deb ... 645s Unpacking libgeos3.14.1:ppc64el (3.14.1-2) ... 645s Selecting previously unselected package libgeos-c1t64:ppc64el. 645s Preparing to unpack .../041-libgeos-c1t64_3.14.1-2_ppc64el.deb ... 645s Unpacking libgeos-c1t64:ppc64el (3.14.1-2) ... 645s Selecting previously unselected package proj-data. 645s Preparing to unpack .../042-proj-data_9.7.1-1_all.deb ... 645s Unpacking proj-data (9.7.1-1) ... 645s Selecting previously unselected package libjbig0:ppc64el. 645s Preparing to unpack .../043-libjbig0_2.1-6.1ubuntu3_ppc64el.deb ... 645s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu3) ... 645s Selecting previously unselected package liblerc4:ppc64el. 645s Preparing to unpack .../044-liblerc4_4.0.0+ds-5ubuntu2_ppc64el.deb ... 645s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu2) ... 645s Selecting previously unselected package libsharpyuv0:ppc64el. 645s Preparing to unpack .../045-libsharpyuv0_1.5.0-0.1build1_ppc64el.deb ... 645s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1build1) ... 645s Selecting previously unselected package libwebp7:ppc64el. 645s Preparing to unpack .../046-libwebp7_1.5.0-0.1build1_ppc64el.deb ... 645s Unpacking libwebp7:ppc64el (1.5.0-0.1build1) ... 645s Selecting previously unselected package libtiff6:ppc64el. 645s Preparing to unpack .../047-libtiff6_4.7.0-3ubuntu3_ppc64el.deb ... 645s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu3) ... 645s Selecting previously unselected package libproj25:ppc64el. 645s Preparing to unpack .../048-libproj25_9.7.1-1_ppc64el.deb ... 645s Unpacking libproj25:ppc64el (9.7.1-1) ... 645s Selecting previously unselected package libgeotiff5:ppc64el. 645s Preparing to unpack .../049-libgeotiff5_1.7.4-1build1_ppc64el.deb ... 645s Unpacking libgeotiff5:ppc64el (1.7.4-1build1) ... 645s Selecting previously unselected package libgif7:ppc64el. 645s Preparing to unpack .../050-libgif7_5.2.2-1ubuntu3_ppc64el.deb ... 645s Unpacking libgif7:ppc64el (5.2.2-1ubuntu3) ... 645s Selecting previously unselected package libsz2:ppc64el. 645s Preparing to unpack .../051-libsz2_1.1.5-1_ppc64el.deb ... 645s Unpacking libsz2:ppc64el (1.1.5-1) ... 645s Selecting previously unselected package libhdf4-0:ppc64el. 645s Preparing to unpack .../052-libhdf4-0_4.3.1-2_ppc64el.deb ... 645s Unpacking libhdf4-0:ppc64el (4.3.1-2) ... 645s Selecting previously unselected package libhdf5-310:ppc64el. 645s Preparing to unpack .../053-libhdf5-310_1.14.6+repack-2_ppc64el.deb ... 645s Unpacking libhdf5-310:ppc64el (1.14.6+repack-2) ... 645s Selecting previously unselected package libheif-plugin-aomdec:ppc64el. 645s Preparing to unpack .../054-libheif-plugin-aomdec_1.21.2-1_ppc64el.deb ... 645s Unpacking libheif-plugin-aomdec:ppc64el (1.21.2-1) ... 645s Selecting previously unselected package libheif-plugin-libde265:ppc64el. 645s Preparing to unpack .../055-libheif-plugin-libde265_1.21.2-1_ppc64el.deb ... 645s Unpacking libheif-plugin-libde265:ppc64el (1.21.2-1) ... 645s Selecting previously unselected package libheif1:ppc64el. 645s Preparing to unpack .../056-libheif1_1.21.2-1_ppc64el.deb ... 645s Unpacking libheif1:ppc64el (1.21.2-1) ... 645s Selecting previously unselected package libhwy1t64:ppc64el. 645s Preparing to unpack .../057-libhwy1t64_1.3.0-2_ppc64el.deb ... 645s Unpacking libhwy1t64:ppc64el (1.3.0-2) ... 645s Selecting previously unselected package liblcms2-2:ppc64el. 645s Preparing to unpack .../058-liblcms2-2_2.17-1_ppc64el.deb ... 645s Unpacking liblcms2-2:ppc64el (2.17-1) ... 645s Selecting previously unselected package libjxl0.11:ppc64el. 645s Preparing to unpack .../059-libjxl0.11_0.11.1-6ubuntu1_ppc64el.deb ... 645s Unpacking libjxl0.11:ppc64el (0.11.1-6ubuntu1) ... 645s Selecting previously unselected package liburiparser1:ppc64el. 645s Preparing to unpack .../060-liburiparser1_0.9.8+dfsg-2_ppc64el.deb ... 645s Unpacking liburiparser1:ppc64el (0.9.8+dfsg-2) ... 645s Selecting previously unselected package libkmlbase1t64:ppc64el. 645s Preparing to unpack .../061-libkmlbase1t64_1.3.0-13_ppc64el.deb ... 645s Unpacking libkmlbase1t64:ppc64el (1.3.0-13) ... 645s Selecting previously unselected package libkmldom1t64:ppc64el. 645s Preparing to unpack .../062-libkmldom1t64_1.3.0-13_ppc64el.deb ... 645s Unpacking libkmldom1t64:ppc64el (1.3.0-13) ... 645s Selecting previously unselected package libkmlengine1t64:ppc64el. 646s Preparing to unpack .../063-libkmlengine1t64_1.3.0-13_ppc64el.deb ... 646s Unpacking libkmlengine1t64:ppc64el (1.3.0-13) ... 646s Selecting previously unselected package libgomp1:ppc64el. 646s Preparing to unpack .../064-libgomp1_15.2.0-12ubuntu1_ppc64el.deb ... 646s Unpacking libgomp1:ppc64el (15.2.0-12ubuntu1) ... 646s Selecting previously unselected package libmuparser2v5:ppc64el. 646s Preparing to unpack .../065-libmuparser2v5_2.3.4-2_ppc64el.deb ... 646s Unpacking libmuparser2v5:ppc64el (2.3.4-2) ... 646s Selecting previously unselected package mysql-common. 646s Preparing to unpack .../066-mysql-common_5.8+1.1.1ubuntu2_all.deb ... 646s Unpacking mysql-common (5.8+1.1.1ubuntu2) ... 646s Selecting previously unselected package libmysqlclient24:ppc64el. 646s Preparing to unpack .../067-libmysqlclient24_8.4.8-0ubuntu1_ppc64el.deb ... 646s Unpacking libmysqlclient24:ppc64el (8.4.8-0ubuntu1) ... 646s Selecting previously unselected package libhdf5-hl-310:ppc64el. 646s Preparing to unpack .../068-libhdf5-hl-310_1.14.6+repack-2_ppc64el.deb ... 646s Unpacking libhdf5-hl-310:ppc64el (1.14.6+repack-2) ... 646s Selecting previously unselected package libnetcdf22:ppc64el. 646s Preparing to unpack .../069-libnetcdf22_1%3a4.9.3-1build1_ppc64el.deb ... 646s Unpacking libnetcdf22:ppc64el (1:4.9.3-1build1) ... 646s Selecting previously unselected package libltdl7:ppc64el. 646s Preparing to unpack .../070-libltdl7_2.5.4-9_ppc64el.deb ... 646s Unpacking libltdl7:ppc64el (2.5.4-9) ... 646s Selecting previously unselected package libodbc2:ppc64el. 646s Preparing to unpack .../071-libodbc2_2.3.14-1_ppc64el.deb ... 646s Unpacking libodbc2:ppc64el (2.3.14-1) ... 646s Selecting previously unselected package unixodbc-common. 646s Preparing to unpack .../072-unixodbc-common_2.3.14-1_all.deb ... 646s Unpacking unixodbc-common (2.3.14-1) ... 646s Selecting previously unselected package libodbcinst2:ppc64el. 646s Preparing to unpack .../073-libodbcinst2_2.3.14-1_ppc64el.deb ... 646s Unpacking libodbcinst2:ppc64el (2.3.14-1) ... 646s Selecting previously unselected package libopenjp2-7:ppc64el. 646s Preparing to unpack .../074-libopenjp2-7_2.5.4-1_ppc64el.deb ... 646s Unpacking libopenjp2-7:ppc64el (2.5.4-1) ... 646s Selecting previously unselected package libgpgmepp6t64:ppc64el. 646s Preparing to unpack .../075-libgpgmepp6t64_1.24.2-3ubuntu2_ppc64el.deb ... 646s Unpacking libgpgmepp6t64:ppc64el (1.24.2-3ubuntu2) ... 646s Selecting previously unselected package libpoppler147:ppc64el. 646s Preparing to unpack .../076-libpoppler147_25.03.0-11.1_ppc64el.deb ... 646s Unpacking libpoppler147:ppc64el (25.03.0-11.1) ... 646s Selecting previously unselected package libpq5:ppc64el. 646s Preparing to unpack .../077-libpq5_18.1-2_ppc64el.deb ... 646s Unpacking libpq5:ppc64el (18.1-2) ... 646s Selecting previously unselected package libqhull-r8.0:ppc64el. 646s Preparing to unpack .../078-libqhull-r8.0_2020.2-8_ppc64el.deb ... 646s Unpacking libqhull-r8.0:ppc64el (2020.2-8) ... 646s Selecting previously unselected package librttopo1:ppc64el. 646s Preparing to unpack .../079-librttopo1_1.1.0-4build1_ppc64el.deb ... 646s Unpacking librttopo1:ppc64el (1.1.0-4build1) ... 646s Selecting previously unselected package libspatialite8t64:ppc64el. 646s Preparing to unpack .../080-libspatialite8t64_5.1.0-3ubuntu1_ppc64el.deb ... 646s Unpacking libspatialite8t64:ppc64el (5.1.0-3ubuntu1) ... 646s Selecting previously unselected package libxerces-c3.2t64:ppc64el. 646s Preparing to unpack .../081-libxerces-c3.2t64_3.2.4+debian-1.3build2_ppc64el.deb ... 646s Unpacking libxerces-c3.2t64:ppc64el (3.2.4+debian-1.3build2) ... 646s Selecting previously unselected package libgdal38:ppc64el. 646s Preparing to unpack .../082-libgdal38_3.12.1+dfsg-1_ppc64el.deb ... 646s Unpacking libgdal38:ppc64el (3.12.1+dfsg-1) ... 646s Selecting previously unselected package libgraphite2-3:ppc64el. 646s Preparing to unpack .../083-libgraphite2-3_1.3.14-11ubuntu1_ppc64el.deb ... 646s Unpacking libgraphite2-3:ppc64el (1.3.14-11ubuntu1) ... 646s Selecting previously unselected package libharfbuzz0b:ppc64el. 646s Preparing to unpack .../084-libharfbuzz0b_12.3.2-1_ppc64el.deb ... 646s Unpacking libharfbuzz0b:ppc64el (12.3.2-1) ... 646s Selecting previously unselected package x11-common. 646s Preparing to unpack .../085-x11-common_1%3a7.7+24ubuntu1_all.deb ... 646s Unpacking x11-common (1:7.7+24ubuntu1) ... 646s Selecting previously unselected package libice6:ppc64el. 646s Preparing to unpack .../086-libice6_2%3a1.1.1-1build1_ppc64el.deb ... 646s Unpacking libice6:ppc64el (2:1.1.1-1build1) ... 646s Selecting previously unselected package libjs-bootstrap. 646s Preparing to unpack .../087-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 646s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 646s Selecting previously unselected package libjs-popper.js. 646s Preparing to unpack .../088-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 646s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 646s Selecting previously unselected package libjs-bootstrap4. 646s Preparing to unpack .../089-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 646s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 646s Selecting previously unselected package libjs-d3. 646s Preparing to unpack .../090-libjs-d3_3.5.17-4build1_all.deb ... 646s Unpacking libjs-d3 (3.5.17-4build1) ... 646s Selecting previously unselected package libjs-es5-shim. 646s Preparing to unpack .../091-libjs-es5-shim_4.6.7-2_all.deb ... 646s Unpacking libjs-es5-shim (4.6.7-2) ... 646s Selecting previously unselected package libjs-highlight.js. 646s Preparing to unpack .../092-libjs-highlight.js_10.7.3+dfsg-2_all.deb ... 646s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ... 646s Selecting previously unselected package libjs-jquery. 646s Preparing to unpack .../093-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 646s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 646s Selecting previously unselected package libjs-jquery-datatables. 646s Preparing to unpack .../094-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 646s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 646s Selecting previously unselected package libjs-sifter.js. 646s Preparing to unpack .../095-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 646s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 646s Selecting previously unselected package libjs-microplugin.js. 646s Preparing to unpack .../096-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ... 646s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ... 646s Selecting previously unselected package libjs-jquery-selectize.js. 646s Preparing to unpack .../097-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 646s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 646s Selecting previously unselected package libjs-jquery-ui. 646s Preparing to unpack .../098-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 646s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 647s Selecting previously unselected package libjs-json. 647s Preparing to unpack .../099-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 647s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 647s Selecting previously unselected package libjs-prettify. 647s Preparing to unpack .../100-libjs-prettify_2015.12.04+dfsg-3_all.deb ... 647s Unpacking libjs-prettify (2015.12.04+dfsg-3) ... 647s Selecting previously unselected package liblua5.4-0:ppc64el. 647s Preparing to unpack .../101-liblua5.4-0_5.4.8-1_ppc64el.deb ... 647s Unpacking liblua5.4-0:ppc64el (5.4.8-1) ... 647s Selecting previously unselected package libthai-data. 647s Preparing to unpack .../102-libthai-data_0.1.30-1_all.deb ... 647s Unpacking libthai-data (0.1.30-1) ... 647s Selecting previously unselected package libthai0:ppc64el. 647s Preparing to unpack .../103-libthai0_0.1.30-1_ppc64el.deb ... 647s Unpacking libthai0:ppc64el (0.1.30-1) ... 647s Selecting previously unselected package libpango-1.0-0:ppc64el. 647s Preparing to unpack .../104-libpango-1.0-0_1.57.0-1_ppc64el.deb ... 647s Unpacking libpango-1.0-0:ppc64el (1.57.0-1) ... 647s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 647s Preparing to unpack .../105-libpangoft2-1.0-0_1.57.0-1_ppc64el.deb ... 647s Unpacking libpangoft2-1.0-0:ppc64el (1.57.0-1) ... 647s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 647s Preparing to unpack .../106-libpangocairo-1.0-0_1.57.0-1_ppc64el.deb ... 647s Unpacking libpangocairo-1.0-0:ppc64el (1.57.0-1) ... 647s Selecting previously unselected package libpaper2:ppc64el. 647s Preparing to unpack .../107-libpaper2_2.2.5-0.3build1_ppc64el.deb ... 647s Unpacking libpaper2:ppc64el (2.2.5-0.3build1) ... 647s Selecting previously unselected package libpaper-utils. 647s Preparing to unpack .../108-libpaper-utils_2.2.5-0.3build1_ppc64el.deb ... 647s Unpacking libpaper-utils (2.2.5-0.3build1) ... 647s Selecting previously unselected package libsm6:ppc64el. 647s Preparing to unpack .../109-libsm6_2%3a1.2.6-1build1_ppc64el.deb ... 647s Unpacking libsm6:ppc64el (2:1.2.6-1build1) ... 647s Selecting previously unselected package libtcl8.6:ppc64el. 647s Preparing to unpack .../110-libtcl8.6_8.6.17+dfsg-1build1_ppc64el.deb ... 647s Unpacking libtcl8.6:ppc64el (8.6.17+dfsg-1build1) ... 647s Selecting previously unselected package libxft2:ppc64el. 647s Preparing to unpack .../111-libxft2_2.3.6-1build2_ppc64el.deb ... 647s Unpacking libxft2:ppc64el (2.3.6-1build2) ... 647s Selecting previously unselected package libxss1:ppc64el. 647s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build4_ppc64el.deb ... 647s Unpacking libxss1:ppc64el (1:1.2.3-1build4) ... 647s Selecting previously unselected package libtk8.6:ppc64el. 647s Preparing to unpack .../113-libtk8.6_8.6.17-1_ppc64el.deb ... 647s Unpacking libtk8.6:ppc64el (8.6.17-1) ... 647s Selecting previously unselected package libudunits2-data. 647s Preparing to unpack .../114-libudunits2-data_2.2.28-8_all.deb ... 647s Unpacking libudunits2-data (2.2.28-8) ... 647s Selecting previously unselected package libudunits2-0:ppc64el. 647s Preparing to unpack .../115-libudunits2-0_2.2.28-8_ppc64el.deb ... 647s Unpacking libudunits2-0:ppc64el (2.2.28-8) ... 647s Selecting previously unselected package libxt6t64:ppc64el. 647s Preparing to unpack .../116-libxt6t64_1%3a1.2.1-1.3_ppc64el.deb ... 647s Unpacking libxt6t64:ppc64el (1:1.2.1-1.3) ... 647s Selecting previously unselected package node-bootstrap-sass. 647s Preparing to unpack .../117-node-bootstrap-sass_3.4.3-2_all.deb ... 647s Unpacking node-bootstrap-sass (3.4.3-2) ... 647s Selecting previously unselected package node-html5shiv. 647s Preparing to unpack .../118-node-html5shiv_3.7.3+dfsg-5_all.deb ... 647s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 647s Selecting previously unselected package node-normalize.css. 647s Preparing to unpack .../119-node-normalize.css_8.0.1-5.1_all.deb ... 647s Unpacking node-normalize.css (8.0.1-5.1) ... 647s Selecting previously unselected package pandoc-data. 647s Preparing to unpack .../120-pandoc-data_3.1.11.1-3build1_all.deb ... 647s Unpacking pandoc-data (3.1.11.1-3build1) ... 647s Selecting previously unselected package pandoc. 647s Preparing to unpack .../121-pandoc_3.1.11.1+ds-4_ppc64el.deb ... 647s Unpacking pandoc (3.1.11.1+ds-4) ... 648s Selecting previously unselected package zip. 648s Preparing to unpack .../122-zip_3.0-15ubuntu3_ppc64el.deb ... 648s Unpacking zip (3.0-15ubuntu3) ... 648s Selecting previously unselected package unzip. 648s Preparing to unpack .../123-unzip_6.0-29ubuntu1_ppc64el.deb ... 648s Unpacking unzip (6.0-29ubuntu1) ... 648s Selecting previously unselected package xdg-utils. 648s Preparing to unpack .../124-xdg-utils_1.2.1-2ubuntu2_all.deb ... 648s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 648s Selecting previously unselected package r-base-core. 648s Preparing to unpack .../125-r-base-core_4.5.2-1ubuntu2_ppc64el.deb ... 648s Unpacking r-base-core (4.5.2-1ubuntu2) ... 649s Selecting previously unselected package r-cran-abind. 649s Preparing to unpack .../126-r-cran-abind_1.4-8-1build1_all.deb ... 649s Unpacking r-cran-abind (1.4-8-1build1) ... 649s Selecting previously unselected package r-cran-mass. 649s Preparing to unpack .../127-r-cran-mass_7.3-65-1_ppc64el.deb ... 649s Unpacking r-cran-mass (7.3-65-1) ... 649s Selecting previously unselected package r-cran-pixmap. 649s Preparing to unpack .../128-r-cran-pixmap_0.4-14-1_all.deb ... 649s Unpacking r-cran-pixmap (0.4-14-1) ... 649s Selecting previously unselected package r-cran-lattice. 649s Preparing to unpack .../129-r-cran-lattice_0.22-9-1_ppc64el.deb ... 649s Unpacking r-cran-lattice (0.22-9-1) ... 649s Selecting previously unselected package r-cran-sp. 649s Preparing to unpack .../130-r-cran-sp_1%3a2.2-0+dfsg-1_ppc64el.deb ... 649s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 649s Selecting previously unselected package r-cran-littler. 649s Preparing to unpack .../131-r-cran-littler_0.3.22-1_ppc64el.deb ... 649s Unpacking r-cran-littler (0.3.22-1) ... 649s Selecting previously unselected package r-cran-pkgkitten. 649s Preparing to unpack .../132-r-cran-pkgkitten_0.2.4-1_all.deb ... 649s Unpacking r-cran-pkgkitten (0.2.4-1) ... 649s Selecting previously unselected package r-cran-rcpp. 649s Preparing to unpack .../133-r-cran-rcpp_1.1.0-1_ppc64el.deb ... 649s Unpacking r-cran-rcpp (1.1.0-1) ... 649s Selecting previously unselected package r-cran-rcpparmadillo. 649s Preparing to unpack .../134-r-cran-rcpparmadillo_15.2.3-1-1_ppc64el.deb ... 649s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ... 649s Selecting previously unselected package r-cran-ade4. 649s Preparing to unpack .../135-r-cran-ade4_1.7-23-1_ppc64el.deb ... 649s Unpacking r-cran-ade4 (1.7-23-1) ... 649s Selecting previously unselected package r-cran-kernsmooth. 649s Preparing to unpack .../136-r-cran-kernsmooth_2.23-26-1build1_ppc64el.deb ... 649s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 649s Selecting previously unselected package r-cran-png. 650s Preparing to unpack .../137-r-cran-png_0.1-8-1build2_ppc64el.deb ... 650s Unpacking r-cran-png (0.1-8-1build2) ... 650s Selecting previously unselected package r-cran-jpeg. 650s Preparing to unpack .../138-r-cran-jpeg_0.1-10-1_ppc64el.deb ... 650s Unpacking r-cran-jpeg (0.1-10-1) ... 650s Selecting previously unselected package r-cran-rcolorbrewer. 650s Preparing to unpack .../139-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 650s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 650s Selecting previously unselected package r-cran-deldir. 650s Preparing to unpack .../140-r-cran-deldir_2.0-4-1build1_ppc64el.deb ... 650s Unpacking r-cran-deldir (2.0-4-1build1) ... 650s Selecting previously unselected package r-cran-matrix. 650s Preparing to unpack .../141-r-cran-matrix_1.7-4-1_ppc64el.deb ... 650s Unpacking r-cran-matrix (1.7-4-1) ... 650s Selecting previously unselected package r-cran-rcppeigen. 650s Preparing to unpack .../142-r-cran-rcppeigen_0.3.4.0.2-1_ppc64el.deb ... 650s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 650s Selecting previously unselected package r-cran-interp. 650s Preparing to unpack .../143-r-cran-interp_1.1-6-1_ppc64el.deb ... 650s Unpacking r-cran-interp (1.1-6-1) ... 650s Selecting previously unselected package r-cran-latticeextra. 650s Preparing to unpack .../144-r-cran-latticeextra_0.6-31-1_all.deb ... 650s Unpacking r-cran-latticeextra (0.6-31-1) ... 650s Selecting previously unselected package r-cran-adegraphics. 650s Preparing to unpack .../145-r-cran-adegraphics_1.0-22-1_all.deb ... 650s Unpacking r-cran-adegraphics (1.0-22-1) ... 650s Selecting previously unselected package r-cran-backports. 650s Preparing to unpack .../146-r-cran-backports_1.5.0-2_ppc64el.deb ... 650s Unpacking r-cran-backports (1.5.0-2) ... 650s Selecting previously unselected package r-cran-base64enc. 650s Preparing to unpack .../147-r-cran-base64enc_0.1-3-3build1_ppc64el.deb ... 650s Unpacking r-cran-base64enc (0.1-3-3build1) ... 650s Selecting previously unselected package r-cran-boot. 650s Preparing to unpack .../148-r-cran-boot_1.3-32-1_all.deb ... 650s Unpacking r-cran-boot (1.3-32-1) ... 650s Selecting previously unselected package r-cran-cli. 650s Preparing to unpack .../149-r-cran-cli_3.6.4-1_ppc64el.deb ... 650s Unpacking r-cran-cli (3.6.4-1) ... 650s Selecting previously unselected package r-cran-generics. 650s Preparing to unpack .../150-r-cran-generics_0.1.4-1_all.deb ... 650s Unpacking r-cran-generics (0.1.4-1) ... 650s Selecting previously unselected package r-cran-glue. 650s Preparing to unpack .../151-r-cran-glue_1.8.0-1_ppc64el.deb ... 650s Unpacking r-cran-glue (1.8.0-1) ... 650s Selecting previously unselected package r-cran-rlang. 650s Preparing to unpack .../152-r-cran-rlang_1.1.5-3_ppc64el.deb ... 650s Unpacking r-cran-rlang (1.1.5-3) ... 650s Selecting previously unselected package r-cran-lifecycle. 650s Preparing to unpack .../153-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 650s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 650s Selecting previously unselected package r-cran-magrittr. 650s Preparing to unpack .../154-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 650s Unpacking r-cran-magrittr (2.0.3-1) ... 650s Selecting previously unselected package r-cran-utf8. 650s Preparing to unpack .../155-r-cran-utf8_1.2.4-1_ppc64el.deb ... 650s Unpacking r-cran-utf8 (1.2.4-1) ... 650s Selecting previously unselected package r-cran-vctrs. 650s Preparing to unpack .../156-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 650s Unpacking r-cran-vctrs (0.6.5-1) ... 650s Selecting previously unselected package r-cran-pillar. 650s Preparing to unpack .../157-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 650s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 650s Selecting previously unselected package r-cran-r6. 650s Preparing to unpack .../158-r-cran-r6_2.6.1-1_all.deb ... 650s Unpacking r-cran-r6 (2.6.1-1) ... 650s Selecting previously unselected package r-cran-fansi. 650s Preparing to unpack .../159-r-cran-fansi_1.0.6-2_ppc64el.deb ... 650s Unpacking r-cran-fansi (1.0.6-2) ... 650s Selecting previously unselected package r-cran-pkgconfig. 650s Preparing to unpack .../160-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 650s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 650s Selecting previously unselected package r-cran-tibble. 650s Preparing to unpack .../161-r-cran-tibble_3.2.1+dfsg-3_ppc64el.deb ... 650s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 650s Selecting previously unselected package r-cran-withr. 650s Preparing to unpack .../162-r-cran-withr_3.0.2+dfsg-1_all.deb ... 650s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 650s Selecting previously unselected package r-cran-tidyselect. 650s Preparing to unpack .../163-r-cran-tidyselect_1.2.1+dfsg-1_ppc64el.deb ... 650s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 650s Selecting previously unselected package r-cran-dplyr. 650s Preparing to unpack .../164-r-cran-dplyr_1.1.4-4_ppc64el.deb ... 650s Unpacking r-cran-dplyr (1.1.4-4) ... 650s Selecting previously unselected package r-cran-purrr. 650s Preparing to unpack .../165-r-cran-purrr_1.0.4-1_ppc64el.deb ... 650s Unpacking r-cran-purrr (1.0.4-1) ... 650s Selecting previously unselected package r-cran-stringi. 650s Preparing to unpack .../166-r-cran-stringi_1.8.4-1build2_ppc64el.deb ... 651s Unpacking r-cran-stringi (1.8.4-1build2) ... 651s Selecting previously unselected package r-cran-stringr. 651s Preparing to unpack .../167-r-cran-stringr_1.5.1-1_all.deb ... 651s Unpacking r-cran-stringr (1.5.1-1) ... 651s Selecting previously unselected package r-cran-cpp11. 651s Preparing to unpack .../168-r-cran-cpp11_0.5.3-1_all.deb ... 651s Unpacking r-cran-cpp11 (0.5.3-1) ... 651s Selecting previously unselected package r-cran-tidyr. 651s Preparing to unpack .../169-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 651s Unpacking r-cran-tidyr (1.3.1-1) ... 651s Selecting previously unselected package r-cran-broom. 651s Preparing to unpack .../170-r-cran-broom_1.0.12+dfsg-1_all.deb ... 651s Unpacking r-cran-broom (1.0.12+dfsg-1) ... 651s Selecting previously unselected package r-cran-fastmap. 651s Preparing to unpack .../171-r-cran-fastmap_1.2.0-1_ppc64el.deb ... 651s Unpacking r-cran-fastmap (1.2.0-1) ... 651s Selecting previously unselected package r-cran-cachem. 651s Preparing to unpack .../172-r-cran-cachem_1.1.0-1_ppc64el.deb ... 651s Unpacking r-cran-cachem (1.1.0-1) ... 651s Selecting previously unselected package r-cran-digest. 651s Preparing to unpack .../173-r-cran-digest_0.6.39-1_ppc64el.deb ... 651s Unpacking r-cran-digest (0.6.39-1) ... 651s Selecting previously unselected package r-cran-htmltools. 651s Preparing to unpack .../174-r-cran-htmltools_0.5.8.1-1_ppc64el.deb ... 651s Unpacking r-cran-htmltools (0.5.8.1-1) ... 651s Selecting previously unselected package r-cran-jquerylib. 651s Preparing to unpack .../175-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 651s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 651s Selecting previously unselected package r-cran-jsonlite. 651s Preparing to unpack .../176-r-cran-jsonlite_1.9.1+dfsg-1_ppc64el.deb ... 651s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 651s Selecting previously unselected package r-cran-memoise. 651s Preparing to unpack .../177-r-cran-memoise_2.0.1-1build1_all.deb ... 651s Unpacking r-cran-memoise (2.0.1-1build1) ... 651s Selecting previously unselected package r-cran-mime. 651s Preparing to unpack .../178-r-cran-mime_0.12-2_ppc64el.deb ... 651s Unpacking r-cran-mime (0.12-2) ... 651s Selecting previously unselected package r-cran-fs. 651s Preparing to unpack .../179-r-cran-fs_1.6.5+dfsg-1_ppc64el.deb ... 651s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 651s Selecting previously unselected package r-cran-rappdirs. 651s Preparing to unpack .../180-r-cran-rappdirs_0.3.3-1build1_ppc64el.deb ... 651s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 651s Selecting previously unselected package r-cran-sass. 651s Preparing to unpack .../181-r-cran-sass_0.4.9+dfsg-1_ppc64el.deb ... 651s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 651s Selecting previously unselected package r-cran-bslib. 651s Preparing to unpack .../182-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 651s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 651s Selecting previously unselected package r-cran-cardata. 651s Preparing to unpack .../183-r-cran-cardata_3.0.6-1_all.deb ... 651s Unpacking r-cran-cardata (3.0.6-1) ... 651s Selecting previously unselected package r-cran-formula. 651s Preparing to unpack .../184-r-cran-formula_1.2-5-1_all.deb ... 651s Unpacking r-cran-formula (1.2-5-1) ... 651s Selecting previously unselected package r-cran-nlme. 651s Preparing to unpack .../185-r-cran-nlme_3.1.168-1_ppc64el.deb ... 651s Unpacking r-cran-nlme (3.1.168-1) ... 651s Selecting previously unselected package r-cran-mgcv. 651s Preparing to unpack .../186-r-cran-mgcv_1.9-4-1_ppc64el.deb ... 651s Unpacking r-cran-mgcv (1.9-4-1) ... 651s Selecting previously unselected package r-cran-nnet. 651s Preparing to unpack .../187-r-cran-nnet_7.3-20-1_ppc64el.deb ... 651s Unpacking r-cran-nnet (7.3-20-1) ... 651s Selecting previously unselected package r-cran-minqa. 651s Preparing to unpack .../188-r-cran-minqa_1.2.8-1_ppc64el.deb ... 651s Unpacking r-cran-minqa (1.2.8-1) ... 651s Selecting previously unselected package libnlopt0:ppc64el. 651s Preparing to unpack .../189-libnlopt0_2.7.1-7ubuntu1_ppc64el.deb ... 651s Unpacking libnlopt0:ppc64el (2.7.1-7ubuntu1) ... 651s Selecting previously unselected package r-cran-nloptr. 651s Preparing to unpack .../190-r-cran-nloptr_2.2.1-2_ppc64el.deb ... 651s Unpacking r-cran-nloptr (2.2.1-2) ... 651s Selecting previously unselected package r-cran-rbibutils. 651s Preparing to unpack .../191-r-cran-rbibutils_2.3-1_ppc64el.deb ... 651s Unpacking r-cran-rbibutils (2.3-1) ... 651s Selecting previously unselected package r-cran-rdpack. 651s Preparing to unpack .../192-r-cran-rdpack_2.6.3-1_all.deb ... 651s Unpacking r-cran-rdpack (2.6.3-1) ... 651s Selecting previously unselected package r-cran-reformulas. 651s Preparing to unpack .../193-r-cran-reformulas_0.4.4-1_all.deb ... 651s Unpacking r-cran-reformulas (0.4.4-1) ... 651s Selecting previously unselected package r-cran-statmod. 651s Preparing to unpack .../194-r-cran-statmod_1.5.0-1_ppc64el.deb ... 651s Unpacking r-cran-statmod (1.5.0-1) ... 651s Selecting previously unselected package r-cran-lme4. 651s Preparing to unpack .../195-r-cran-lme4_1.1-38-1_ppc64el.deb ... 651s Unpacking r-cran-lme4 (1.1-38-1) ... 651s Selecting previously unselected package r-cran-numderiv. 651s Preparing to unpack .../196-r-cran-numderiv_2016.8-1.1-3build1_all.deb ... 651s Unpacking r-cran-numderiv (2016.8-1.1-3build1) ... 651s Selecting previously unselected package r-cran-gtable. 651s Preparing to unpack .../197-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 651s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 651s Selecting previously unselected package r-cran-isoband. 651s Preparing to unpack .../198-r-cran-isoband_0.2.7-1_ppc64el.deb ... 651s Unpacking r-cran-isoband (0.2.7-1) ... 651s Selecting previously unselected package r-cran-farver. 651s Preparing to unpack .../199-r-cran-farver_2.1.2-1_ppc64el.deb ... 651s Unpacking r-cran-farver (2.1.2-1) ... 651s Selecting previously unselected package r-cran-labeling. 651s Preparing to unpack .../200-r-cran-labeling_0.4.3-1_all.deb ... 651s Unpacking r-cran-labeling (0.4.3-1) ... 651s Selecting previously unselected package r-cran-viridislite. 651s Preparing to unpack .../201-r-cran-viridislite_0.4.3-1_all.deb ... 651s Unpacking r-cran-viridislite (0.4.3-1) ... 652s Selecting previously unselected package r-cran-scales. 652s Preparing to unpack .../202-r-cran-scales_1.4.0-1_all.deb ... 652s Unpacking r-cran-scales (1.4.0-1) ... 652s Selecting previously unselected package r-cran-ggplot2. 652s Preparing to unpack .../203-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 652s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 652s Selecting previously unselected package r-cran-cowplot. 652s Preparing to unpack .../204-r-cran-cowplot_1.1.3+dfsg-1_all.deb ... 652s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ... 652s Selecting previously unselected package r-cran-deriv. 652s Preparing to unpack .../205-r-cran-deriv_4.2.0-1_all.deb ... 652s Unpacking r-cran-deriv (4.2.0-1) ... 652s Selecting previously unselected package r-cran-colorspace. 652s Preparing to unpack .../206-r-cran-colorspace_2.1-1+dfsg-1_ppc64el.deb ... 652s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 652s Selecting previously unselected package r-cran-fracdiff. 652s Preparing to unpack .../207-r-cran-fracdiff_1.5-3-1_ppc64el.deb ... 652s Unpacking r-cran-fracdiff (1.5-3-1) ... 652s Selecting previously unselected package r-cran-zoo. 652s Preparing to unpack .../208-r-cran-zoo_1.8-15-1_ppc64el.deb ... 652s Unpacking r-cran-zoo (1.8-15-1) ... 652s Selecting previously unselected package r-cran-lmtest. 652s Preparing to unpack .../209-r-cran-lmtest_0.9.40-1build1_ppc64el.deb ... 652s Unpacking r-cran-lmtest (0.9.40-1build1) ... 652s Selecting previously unselected package r-cran-timedate. 652s Preparing to unpack .../210-r-cran-timedate_4052.112-1_ppc64el.deb ... 652s Unpacking r-cran-timedate (4052.112-1) ... 652s Selecting previously unselected package r-cran-quadprog. 652s Preparing to unpack .../211-r-cran-quadprog_1.5-8-1build2_ppc64el.deb ... 652s Unpacking r-cran-quadprog (1.5-8-1build2) ... 652s Selecting previously unselected package r-cran-xts. 652s Preparing to unpack .../212-r-cran-xts_0.14.1-1_ppc64el.deb ... 652s Unpacking r-cran-xts (0.14.1-1) ... 652s Selecting previously unselected package r-cran-curl. 652s Preparing to unpack .../213-r-cran-curl_7.0.0+dfsg-1_ppc64el.deb ... 652s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 652s Selecting previously unselected package r-cran-ttr. 652s Preparing to unpack .../214-r-cran-ttr_0.24.4-1_ppc64el.deb ... 652s Unpacking r-cran-ttr (0.24.4-1) ... 652s Selecting previously unselected package r-cran-quantmod. 652s Preparing to unpack .../215-r-cran-quantmod_0.4.28-1_all.deb ... 652s Unpacking r-cran-quantmod (0.4.28-1) ... 652s Selecting previously unselected package r-cran-tseries. 652s Preparing to unpack .../216-r-cran-tseries_0.10-59-3_ppc64el.deb ... 652s Unpacking r-cran-tseries (0.10-59-3) ... 652s Selecting previously unselected package r-cran-urca. 652s Preparing to unpack .../217-r-cran-urca_1.3-4-1build1_ppc64el.deb ... 652s Unpacking r-cran-urca (1.3-4-1build1) ... 652s Selecting previously unselected package r-cran-forecast. 652s Preparing to unpack .../218-r-cran-forecast_8.23.0-1_ppc64el.deb ... 652s Unpacking r-cran-forecast (8.23.0-1) ... 652s Selecting previously unselected package r-cran-modelr. 652s Preparing to unpack .../219-r-cran-modelr_0.1.11-1_all.deb ... 652s Unpacking r-cran-modelr (0.1.11-1) ... 652s Selecting previously unselected package r-cran-microbenchmark. 652s Preparing to unpack .../220-r-cran-microbenchmark_1.5.0-1_ppc64el.deb ... 652s Unpacking r-cran-microbenchmark (1.5.0-1) ... 652s Selecting previously unselected package r-cran-doby. 652s Preparing to unpack .../221-r-cran-doby_4.7.1-3_all.deb ... 652s Unpacking r-cran-doby (4.7.1-3) ... 652s Selecting previously unselected package r-cran-evaluate. 652s Preparing to unpack .../222-r-cran-evaluate_1.0.5-1_all.deb ... 652s Unpacking r-cran-evaluate (1.0.5-1) ... 652s Selecting previously unselected package r-cran-xfun. 652s Preparing to unpack .../223-r-cran-xfun_0.55+dfsg-1_ppc64el.deb ... 652s Unpacking r-cran-xfun (0.55+dfsg-1) ... 652s Selecting previously unselected package r-cran-highr. 652s Preparing to unpack .../224-r-cran-highr_0.11+dfsg-1_all.deb ... 652s Unpacking r-cran-highr (0.11+dfsg-1) ... 652s Selecting previously unselected package r-cran-yaml. 652s Preparing to unpack .../225-r-cran-yaml_2.3.10-1_ppc64el.deb ... 652s Unpacking r-cran-yaml (2.3.10-1) ... 652s Selecting previously unselected package libjs-mathjax. 652s Preparing to unpack .../226-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 652s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 653s Selecting previously unselected package r-cran-knitr. 653s Preparing to unpack .../227-r-cran-knitr_1.51+dfsg-1_all.deb ... 653s Unpacking r-cran-knitr (1.51+dfsg-1) ... 653s Selecting previously unselected package r-cran-pbkrtest. 653s Preparing to unpack .../228-r-cran-pbkrtest_0.5.5-1_all.deb ... 653s Unpacking r-cran-pbkrtest (0.5.5-1) ... 653s Selecting previously unselected package r-cran-sparsem. 653s Preparing to unpack .../229-r-cran-sparsem_1.84-2-1_ppc64el.deb ... 653s Unpacking r-cran-sparsem (1.84-2-1) ... 653s Selecting previously unselected package r-cran-matrixmodels. 653s Preparing to unpack .../230-r-cran-matrixmodels_0.5-4-1_all.deb ... 653s Unpacking r-cran-matrixmodels (0.5-4-1) ... 653s Selecting previously unselected package r-cran-survival. 653s Preparing to unpack .../231-r-cran-survival_3.8-6-1_ppc64el.deb ... 653s Unpacking r-cran-survival (3.8-6-1) ... 653s Selecting previously unselected package r-cran-matrixstats. 653s Preparing to unpack .../232-r-cran-matrixstats_1.5.0-1_ppc64el.deb ... 653s Unpacking r-cran-matrixstats (1.5.0-1) ... 653s Selecting previously unselected package r-cran-class. 653s Preparing to unpack .../233-r-cran-class_7.3-23-1_ppc64el.deb ... 653s Unpacking r-cran-class (7.3-23-1) ... 653s Selecting previously unselected package r-cran-proxy. 653s Preparing to unpack .../234-r-cran-proxy_0.4-27-1_ppc64el.deb ... 653s Unpacking r-cran-proxy (0.4-27-1) ... 653s Selecting previously unselected package r-cran-e1071. 653s Preparing to unpack .../235-r-cran-e1071_1.7-17-1_ppc64el.deb ... 653s Unpacking r-cran-e1071 (1.7-17-1) ... 653s Selecting previously unselected package r-cran-codetools. 653s Preparing to unpack .../236-r-cran-codetools_0.2-20-1build1_all.deb ... 653s Unpacking r-cran-codetools (0.2-20-1build1) ... 653s Selecting previously unselected package r-cran-iterators. 653s Preparing to unpack .../237-r-cran-iterators_1.0.14-1build1_all.deb ... 653s Unpacking r-cran-iterators (1.0.14-1build1) ... 653s Selecting previously unselected package r-cran-foreach. 653s Preparing to unpack .../238-r-cran-foreach_1.5.2-1build1_all.deb ... 653s Unpacking r-cran-foreach (1.5.2-1build1) ... 653s Selecting previously unselected package r-cran-data.table. 653s Preparing to unpack .../239-r-cran-data.table_1.17.0+dfsg-1_ppc64el.deb ... 653s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 653s Selecting previously unselected package r-cran-modelmetrics. 653s Preparing to unpack .../240-r-cran-modelmetrics_1.2.2.2-1build2_ppc64el.deb ... 653s Unpacking r-cran-modelmetrics (1.2.2.2-1build2) ... 653s Selecting previously unselected package r-cran-plyr. 653s Preparing to unpack .../241-r-cran-plyr_1.8.9-1_ppc64el.deb ... 653s Unpacking r-cran-plyr (1.8.9-1) ... 653s Selecting previously unselected package r-cran-proc. 653s Preparing to unpack .../242-r-cran-proc_1.18.5-1_ppc64el.deb ... 653s Unpacking r-cran-proc (1.18.5-1) ... 653s Selecting previously unselected package r-cran-tzdb. 653s Preparing to unpack .../243-r-cran-tzdb_0.5.0-1_ppc64el.deb ... 653s Unpacking r-cran-tzdb (0.5.0-1) ... 653s Selecting previously unselected package r-cran-clock. 653s Preparing to unpack .../244-r-cran-clock_0.7.2-1_ppc64el.deb ... 653s Unpacking r-cran-clock (0.7.2-1) ... 653s Selecting previously unselected package r-cran-gower. 653s Preparing to unpack .../245-r-cran-gower_1.0.2-1_ppc64el.deb ... 653s Unpacking r-cran-gower (1.0.2-1) ... 653s Selecting previously unselected package r-cran-sparsevctrs. 653s Preparing to unpack .../246-r-cran-sparsevctrs_0.2.0-2_ppc64el.deb ... 653s Unpacking r-cran-sparsevctrs (0.2.0-2) ... 653s Selecting previously unselected package r-cran-hardhat. 653s Preparing to unpack .../247-r-cran-hardhat_1.4.2+dfsg-1_all.deb ... 653s Unpacking r-cran-hardhat (1.4.2+dfsg-1) ... 654s Selecting previously unselected package r-cran-rpart. 654s Preparing to unpack .../248-r-cran-rpart_4.1.24-1build1_ppc64el.deb ... 654s Unpacking r-cran-rpart (4.1.24-1build1) ... 654s Selecting previously unselected package r-cran-shape. 654s Preparing to unpack .../249-r-cran-shape_1.4.6.1-1_all.deb ... 654s Unpacking r-cran-shape (1.4.6.1-1) ... 654s Selecting previously unselected package r-cran-diagram. 654s Preparing to unpack .../250-r-cran-diagram_1.6.5-2_all.deb ... 654s Unpacking r-cran-diagram (1.6.5-2) ... 654s Selecting previously unselected package r-cran-globals. 654s Preparing to unpack .../251-r-cran-globals_0.19.0-1_all.deb ... 654s Unpacking r-cran-globals (0.19.0-1) ... 654s Selecting previously unselected package r-cran-listenv. 654s Preparing to unpack .../252-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 654s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 654s Selecting previously unselected package r-cran-parallelly. 654s Preparing to unpack .../253-r-cran-parallelly_1.42.0-1_ppc64el.deb ... 654s Unpacking r-cran-parallelly (1.42.0-1) ... 654s Selecting previously unselected package r-cran-future. 654s Preparing to unpack .../254-r-cran-future_1.34.0+dfsg-1_all.deb ... 654s Unpacking r-cran-future (1.34.0+dfsg-1) ... 654s Selecting previously unselected package r-cran-future.apply. 654s Preparing to unpack .../255-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 654s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 654s Selecting previously unselected package r-cran-progressr. 654s Preparing to unpack .../256-r-cran-progressr_0.15.1-1_all.deb ... 654s Unpacking r-cran-progressr (0.15.1-1) ... 654s Selecting previously unselected package r-cran-squarem. 654s Preparing to unpack .../257-r-cran-squarem_2021.1-1build1_all.deb ... 654s Unpacking r-cran-squarem (2021.1-1build1) ... 654s Selecting previously unselected package r-cran-lava. 654s Preparing to unpack .../258-r-cran-lava_1.8.2+dfsg-1_all.deb ... 654s Unpacking r-cran-lava (1.8.2+dfsg-1) ... 654s Selecting previously unselected package r-cran-prodlim. 654s Preparing to unpack .../259-r-cran-prodlim_2024.06.25-1_ppc64el.deb ... 654s Unpacking r-cran-prodlim (2024.06.25-1) ... 654s Selecting previously unselected package r-cran-ipred. 654s Preparing to unpack .../260-r-cran-ipred_0.9-15-1_ppc64el.deb ... 654s Unpacking r-cran-ipred (0.9-15-1) ... 654s Selecting previously unselected package r-cran-timechange. 654s Preparing to unpack .../261-r-cran-timechange_0.3.0-2_ppc64el.deb ... 654s Unpacking r-cran-timechange (0.3.0-2) ... 654s Selecting previously unselected package r-cran-lubridate. 654s Preparing to unpack .../262-r-cran-lubridate_1.9.4+dfsg-1_ppc64el.deb ... 654s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ... 654s Selecting previously unselected package r-cran-recipes. 654s Preparing to unpack .../263-r-cran-recipes_1.1.0+dfsg-1_all.deb ... 654s Unpacking r-cran-recipes (1.1.0+dfsg-1) ... 654s Selecting previously unselected package r-cran-reshape2. 654s Preparing to unpack .../264-r-cran-reshape2_1.4.4-2build2_ppc64el.deb ... 654s Unpacking r-cran-reshape2 (1.4.4-2build2) ... 654s Selecting previously unselected package r-cran-caret. 654s Preparing to unpack .../265-r-cran-caret_7.0-1+dfsg-1_ppc64el.deb ... 654s Unpacking r-cran-caret (7.0-1+dfsg-1) ... 654s Selecting previously unselected package r-cran-conquer. 654s Preparing to unpack .../266-r-cran-conquer_1.3.3-1_ppc64el.deb ... 654s Unpacking r-cran-conquer (1.3.3-1) ... 654s Selecting previously unselected package r-cran-quantreg. 654s Preparing to unpack .../267-r-cran-quantreg_6.1-1_ppc64el.deb ... 654s Unpacking r-cran-quantreg (6.1-1) ... 654s Selecting previously unselected package r-cran-car. 654s Preparing to unpack .../268-r-cran-car_3.1-5-1_all.deb ... 654s Unpacking r-cran-car (3.1-5-1) ... 654s Selecting previously unselected package r-cran-classint. 654s Preparing to unpack .../269-r-cran-classint_0.4-11+dfsg-1_ppc64el.deb ... 654s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 654s Selecting previously unselected package r-cran-commonmark. 654s Preparing to unpack .../270-r-cran-commonmark_1.9.5-1_ppc64el.deb ... 654s Unpacking r-cran-commonmark (1.9.5-1) ... 654s Selecting previously unselected package r-cran-crayon. 654s Preparing to unpack .../271-r-cran-crayon_1.5.3-1_all.deb ... 654s Unpacking r-cran-crayon (1.5.3-1) ... 654s Selecting previously unselected package r-cran-dbi. 654s Preparing to unpack .../272-r-cran-dbi_1.2.3-1build1_all.deb ... 654s Unpacking r-cran-dbi (1.2.3-1build1) ... 654s Selecting previously unselected package r-cran-fontawesome. 654s Preparing to unpack .../273-r-cran-fontawesome_0.5.3-1_all.deb ... 654s Unpacking r-cran-fontawesome (0.5.3-1) ... 654s Selecting previously unselected package r-cran-guerry. 654s Preparing to unpack .../274-r-cran-guerry_1.8.3-1_all.deb ... 654s Unpacking r-cran-guerry (1.8.3-1) ... 654s Selecting previously unselected package r-cran-later. 654s Preparing to unpack .../275-r-cran-later_1.4.1+dfsg-1_ppc64el.deb ... 654s Unpacking r-cran-later (1.4.1+dfsg-1) ... 654s Selecting previously unselected package r-cran-promises. 654s Preparing to unpack .../276-r-cran-promises_1.3.2+dfsg-1_ppc64el.deb ... 654s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 654s Selecting previously unselected package r-cran-httpuv. 654s Preparing to unpack .../277-r-cran-httpuv_1.6.15+dfsg-1_ppc64el.deb ... 654s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 654s Selecting previously unselected package r-cran-markdown. 654s Preparing to unpack .../278-r-cran-markdown_1.13-1_all.deb ... 654s Unpacking r-cran-markdown (1.13-1) ... 654s Selecting previously unselected package r-cran-tinytex. 654s Preparing to unpack .../279-r-cran-tinytex_0.58-1_all.deb ... 654s Unpacking r-cran-tinytex (0.58-1) ... 654s Selecting previously unselected package libjs-modernizr. 654s Preparing to unpack .../280-libjs-modernizr_3.13.0-0.1build1_all.deb ... 654s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 654s Selecting previously unselected package r-cran-xtable. 654s Preparing to unpack .../281-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 654s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 655s Selecting previously unselected package r-cran-sourcetools. 655s Preparing to unpack .../282-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 655s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 655s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 655s Preparing to unpack .../283-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 655s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 655s Selecting previously unselected package r-cran-shiny. 655s Preparing to unpack .../284-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 655s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 655s Selecting previously unselected package r-cran-rmarkdown. 655s Preparing to unpack .../285-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 655s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 655s Selecting previously unselected package r-cran-wk. 655s Preparing to unpack .../286-r-cran-wk_0.9.4-1_ppc64el.deb ... 655s Unpacking r-cran-wk (0.9.4-1) ... 655s Selecting previously unselected package r-cran-s2. 655s Preparing to unpack .../287-r-cran-s2_1.1.9-1build1_ppc64el.deb ... 655s Unpacking r-cran-s2 (1.1.9-1build1) ... 655s Selecting previously unselected package r-cran-units. 655s Preparing to unpack .../288-r-cran-units_0.8-7+dfsg-2_ppc64el.deb ... 655s Unpacking r-cran-units (0.8-7+dfsg-2) ... 655s Selecting previously unselected package r-cran-sf. 655s Preparing to unpack .../289-r-cran-sf_1.0-19+dfsg-2build2_ppc64el.deb ... 655s Unpacking r-cran-sf (1.0-19+dfsg-2build2) ... 655s Selecting previously unselected package r-cran-spdata. 655s Preparing to unpack .../290-r-cran-spdata_2.3.4-1_all.deb ... 655s Unpacking r-cran-spdata (2.3.4-1) ... 655s Selecting previously unselected package r-cran-spdep. 655s Preparing to unpack .../291-r-cran-spdep_1.3-5+dfsg-1_ppc64el.deb ... 655s Unpacking r-cran-spdep (1.3-5+dfsg-1) ... 655s Setting up libhwy1t64:ppc64el (1.3.0-2) ... 655s Setting up libjs-json (0~20221030+~1.0.8-1build1) ... 655s Setting up javascript-common (12+nmu1build1) ... 655s Setting up libgraphite2-3:ppc64el (1.3.14-11ubuntu1) ... 655s Setting up liblcms2-2:ppc64el (2.17-1) ... 655s Setting up libpixman-1-0:ppc64el (0.46.4-1) ... 655s Setting up libsharpyuv0:ppc64el (1.5.0-0.1build1) ... 655s Setting up libgpgmepp6t64:ppc64el (1.24.2-3ubuntu2) ... 655s Setting up libaom3:ppc64el (3.13.1-2) ... 655s Setting up mysql-common (5.8+1.1.1ubuntu2) ... 655s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode 655s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ... 655s Setting up liblerc4:ppc64el (4.0.0+ds-5ubuntu2) ... 655s Setting up proj-data (9.7.1-1) ... 655s Setting up 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r-cran-lubridate (1.9.4+dfsg-1) ... 658s Setting up r-cran-prodlim (2024.06.25-1) ... 658s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 658s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 658s Setting up r-cran-rpart (4.1.24-1build1) ... 658s Setting up r-cran-latticeextra (0.6-31-1) ... 658s Setting up r-cran-ipred (0.9-15-1) ... 658s Setting up r-cran-lme4 (1.1-38-1) ... 658s Setting up r-cran-classint (0.4-11+dfsg-1) ... 658s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 658s Setting up r-cran-tidyr (1.3.1-1) ... 658s Setting up r-cran-recipes (1.1.0+dfsg-1) ... 658s Setting up r-cran-quantmod (0.4.28-1) ... 658s Setting up r-cran-cowplot (1.1.3+dfsg-1) ... 658s Setting up r-cran-adegraphics (1.0-22-1) ... 658s Setting up r-cran-caret (7.0-1+dfsg-1) ... 658s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 658s Setting up r-cran-tseries (0.10-59-3) ... 658s Setting up r-cran-broom (1.0.12+dfsg-1) ... 658s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 658s Setting up r-cran-conquer (1.3.3-1) ... 658s Setting up r-cran-forecast (8.23.0-1) ... 658s Setting up r-cran-quantreg (6.1-1) ... 658s Setting up r-cran-modelr (0.1.11-1) ... 658s Setting up r-cran-doby (4.7.1-3) ... 658s Setting up r-cran-pbkrtest (0.5.5-1) ... 658s Setting up r-cran-car (3.1-5-1) ... 658s Setting up libheif1:ppc64el (1.21.2-1) ... 658s Setting up libheif-plugin-aomdec:ppc64el (1.21.2-1) ... 658s Setting up libheif-plugin-libde265:ppc64el (1.21.2-1) ... 658s Setting up libgdal38:ppc64el (3.12.1+dfsg-1) ... 658s Setting up r-cran-sf (1.0-19+dfsg-2build2) ... 658s Setting up r-cran-spdep (1.3-5+dfsg-1) ... 658s Processing triggers for install-info (7.2-5) ... 658s Processing triggers for libc-bin (2.42-2ubuntu4) ... 658s Processing triggers for man-db (2.13.1-1build1) ... 660s autopkgtest [22:51:45]: test run-unit-test: [----------------------- 660s 660s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 660s Copyright (C) 2025 The R Foundation for Statistical Computing 660s Platform: powerpc64le-unknown-linux-gnu 660s 660s R is free software and comes with ABSOLUTELY NO WARRANTY. 660s You are welcome to redistribute it under certain conditions. 660s Type 'license()' or 'licence()' for distribution details. 660s 660s R is a collaborative project with many contributors. 660s Type 'contributors()' for more information and 660s 'citation()' on how to cite R or R packages in publications. 660s 660s Type 'demo()' for some demos, 'help()' for on-line help, or 660s 'help.start()' for an HTML browser interface to help. 660s Type 'q()' to quit R. 660s 660s > library(adegraphics) 661s Registered S3 methods overwritten by 'adegraphics': 661s method from 661s biplot.dudi ade4 661s kplot.foucart ade4 661s kplot.mcoa ade4 661s kplot.mfa ade4 661s kplot.pta ade4 661s kplot.sepan ade4 661s kplot.statis ade4 661s scatter.coa ade4 661s scatter.dudi ade4 661s scatter.nipals ade4 661s scatter.pco ade4 661s score.acm ade4 661s score.mix ade4 661s score.pca ade4 661s screeplot.dudi ade4 661s > pdf("add.pdf") 661s > set.seed(40) 661s > 661s > ########################### add.ADEg ############################## 661s > 661s > data(granulo, package = "ade4") 661s > df <- data.frame(t(apply(granulo$tab, 1, function(x) x / sum(x)))) 661s > pca <- ade4::dudi.pca(df, scal = FALSE, scan = FALSE) 661s > 661s > g1 <- s.arrow(ade4::dudi.pca(data.frame(df), scan = F, nf = 2)$co) 661s > g2 <- s.label(pca$li, plabels.cex = 0.5, plabels.col = "blue", plot = F) 661s > g3 <- add.ADEg(g2) 661s > g4 <- s.label(pca$c1, plabels.col = "red", add = T) 661s > 661s > g5 <- s.arrow(pca$c1, plabels.cex = 1.5, plot = FALSE) 661s > g6 <- ADEgS(list(g1 = g1, g5 = g5), layout = c(1, 2)) 661s > update(g6, pback.col = "lightblue", g1.plabels.cex = 2, g5.plabels.col = "red") 661s > 661s > 661s > ############################## addhist ############################## 661s > dfxy1 <- matrix(rnorm(200), ncol = 2) 661s > gh1 <- s.label(dfxy1) 661s > gh2 <- addhist(gh1) 661s > 661s > dfxy2 <- dfxy1 661s > dfxy2[, 2] <- dfxy2[, 2] + rnorm(100, 2) 661s > gh3 <- s.label(dfxy2) 662s > gh4 <- addhist(gh3, plot.polygon = list(col = "red")) 662s > 662s > data(rpjdl, package = "ade4") 662s > coa1 <- ade4::dudi.coa(rpjdl$fau, scannf = FALSE, nf = 4) 662s > gh5 <- s.label(coa1$li) 662s > gh6 <- addhist(gh5) 662s > 662s > 662s > ############################## addtext ############################## 662s > # on a ADEg 662s > addtext(g1, -1, 1, "Data Granulo", plabels.cex = 1.5, plabels.col = "red") 662s > addtext(g1, -1, 1, c("Data", "Granulo"), plabels.cex = 1.5, plabels.col = c("red", "blue")) # the two labels are superposed 662s > addtext(g1, -1, 1, c("Data", "Granulo"), plabels.cex = 1.5, plabels.col = "red") # the two labels are superposed 662s > 662s > addtext(g1, c(-1, -0.5), 1, "Data Granulo", plabels.cex = 1.5, plabels.col = c("red", "blue")) 662s > addtext(g1, c(-1, -0.5), 1, c("Data", "Granulo"), plabels.cex = 1.5, plabels.col = c("red", "blue")) 662s > 662s > addtext(g1, -1, c(1, 0.9), c("Data", "Granulo"), plabels.cex = 1.5, plabels.col = "red") 662s > addtext(g1, -1, c(1, 0.9), c("Data", "Granulo"), plabels.cex = c(1.5, 2), plabels.col = "red") 662s > 662s > data(dunedata, package = "ade4") 662s > afc1 <- ade4::dudi.coa(dunedata$veg, scannf = FALSE) 663s > g7 <- table.value(dunedata$veg, symbol = "circle", ppoints.cex = 0.5, plot = FALSE) 663s > addtext(g7, 1, 20, "A", plabels.srt = 45, plabels.boxes.draw = FALSE) 663s > 663s > # on a ADEgS: juxtaposition 663s > addtext(g6, 0.5, 0.5, "Text added", plabels.col = "blue", which = 1) 663s > addtext(g6, 0.5, 0.5, "Text added", plabels.col = c("blue", "green"), which = 2) 663s > addtext(g6, 0.5, 0.5, "Text added", plabels.col = c("green4", "blue"), which = 2) 663s > addtext(g6, 0.5, 0.5, "Text added", plabels.col = "blue", which = 1:2) 663s > addtext(g6, 0.5, 0.5, "Text added", plabels.col = c("green4", "blue")) 663s > addtext(g6, c(0.7, -0.5), c(0.2, -0.4), "Text added", plabels.col = "blue", plabels.cex = 1.2, which = 1:2) 663s > addtext(g6, c(0.7, -0.5), c(0.2, -0.4), "Text added", plabels.cex = c(0.5, 1.5), plabels.col = c("blue", "green4")) 663s > 663s > xy2 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -2, 2), y2 = runif(200, -0.5, 0.5)) 663s > fac2 <- factor(xy2$x > 0) 663s > g9 <- s.class(xy2, fac = fac2, xax = 1, yax = 2:3, plot = FALSE) 663s > addtext(g9, 0, 0, "A", plabels.col = "red", plabels.cex = 2) 664s > addtext(g9, c(-2.1, -1.07), c(2, 1), c("A", "B"), plabels.col ="red", plabels.cex = 2, which = 1:2) 664s > addtext(g9, c(-2.1, -1.07), c(2, 1), c("A", "B"), plabels.col = c("green4", "red"), plabels.cex = c(3, 2), which = 1:2) 664s > 664s > # on a ADEgS: facets 664s > xy <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -1, 1)) 664s > posi <- factor(xy$x > 0) : factor(xy$y > 0) 664s > g10 <- s.class(xy, fac = posi, facets = posi, pellipses.col = 1:4, plabels.cex = 0, plegend.drawKey = FALSE, psub.cex = 0, plot = FALSE) 664s > addtext(g10, c(0.5, 0.5, -0.5, -0.5), c(0.5, -0.5), levels(posi), plabels.cex = 2, plabels.col = 1:4) 664s > 664s > 664s > ############################## addline ############################## 664s > # on a 2D plot 664s > g11 <- s.label(cbind(rnorm(100), rnorm(100)), plot = FALSE) 664s > addline(g11, 0, 1, plines = list(col = "red", lwd = 2, lty = 2)) 664s > addline(g11, h = 1, plines.col = "chartreuse4", plines.lwd = 3) 664s > addline(g11, v = c(-1, 1), plines.col = "cadetblue", plines.lwd = 3) 664s > 664s > # on a 1D plot 664s > g12 <- s1d.label(rnorm(10), plot = FALSE) 664s > addline(g12, v = 1, plines.col = "chartreuse4", plines.lwd = 3) 664s > 664s > # on a ADEgS: juxtaposition 664s > g13 <- ADEgS(c(g11, g11), plot = FALSE) 664s > addline(g13, 0, 1, which = 1, plines.col = "red") 664s > addline(g13, 0, 1, which = 2, plines.col = "red") 664s > addline(g13, 0, 1, which = 1:2, plines.col = "red") 664s > addline(g13, 0, 1, plines.col = "red") 665s > addline(g13, h = 1, plines.col = "red") 665s > addline(g13, h = c(1, -1), plines.col = "red") 665s > addline(g13, v = c(-1, 1), plines.col = "red") 665s > addline(g13, v = c(-1, 1), plines.col = 2:3) 665s > addline(g13, c(0.7, -0.5), c(0.2, -0.4), which = 1:2, plines.col = "red") 665s > addline(g13, c(0.7, -0.5), c(0.2, -0.4), which = 1, plines.col = "red") 665s > addline(g13, 0.7, 0.2, which = 1, plines.col = "red") 665s > addline(g13, 0.7, -0.5, which = 1, plines.col = "red") 665s > 665s > xy2 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -2, 2), y2 = runif(200, -0.5, 0.5)) 665s > fac2 <- factor(xy2$x > 0) 665s > g9 <- s.class(xy2, fac = fac2, xax = 1, yax = 2:3, plot = FALSE) 665s > addline(g9, 1, 0, "A", plines.col = "red", plabels.cex = 2) 665s Warning messages: 665s 1: In panel.abline(a = a, b = b, h = h, v = v, lwd = params$lwd, lty = params$lty, : 665s NAs introduced by coercion 665s 2: In panel.abline(a = a, b = b, h = h, v = v, lwd = params$lwd, lty = params$lty, : 665s NAs introduced by coercion 665s > addline(g9, c(-2.1, -1.07), c(2, 1), plines.col ="red", which = 1:2) 665s > addline(g9, c(-2.1, -1.07), c(2, 1), plines.col = c("green4", "red")) 666s > 666s > # on a ADEgS: facets 666s > xy <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -1, 1)) 666s > posi <- factor(xy$x > 0) : factor(xy$y > 0) 666s > g10 <- s.class(xy, fac = posi, facets = posi, pellipses.col = 1:4, plabels.cex = 0, plegend.drawKey = FALSE, psub.cex = 0, plot = FALSE) 666s > addline(g10, 0, c(0.5, -0.5), plines.col = 1:4) 666s > 666s > 666s > ############################## addpoint ############################## 666s > # on a 2D plot 666s > g11 <- s.label(cbind(rnorm(100), rnorm(100)), ylab = "y axis label", 666s + paxes.draw = TRUE, plot = FALSE) 666s > addpoint(g11, 2, 2, ppoints.col = "coral", ppoints.pch = "*", ppoints.cex = 4) 666s > addpoint(g11, c(1, 2), c(1, 2), ppoints.col = "brown2") 666s > addpoint(g11, 1, c(1, 2), ppoints.col = "cyan3") 666s > 666s > # on a 1D plot 666s > g12 <- s1d.density(rnorm(1000), paxes.draw = TRUE, plot = FALSE) 666s > addpoint(g12, 2, 0, ppoints.col = "brown4", ppoints.cex = 3) 666s > 666s > g12 <- s1d.density(rnorm(1000), plot = FALSE, ylab = "y axis label") 666s > addpoint(g12, 2, 0, ppoints.col = "brown4", ppoints.cex = 3) 666s > 666s > # on a ADEgS: juxtaposition 666s > g13 <- ADEgS(c(g11, g11), plot = FALSE) 666s > addpoint(g13, 2, 2, which = 1, ppoints.col = "cyan3") 666s > addpoint(g13, 2, 2, which = 2, ppoints.col = "cyan3") 666s > addpoint(g13, 2, 2, which = 1:2, ppoints.col = "cyan3") 667s > addpoint(g13, 2, 2, ppoints.col = "cyan3") 667s > addpoint(g13, c(1, 2), 2, ppoints.col = "cyan3") 667s > addpoint(g13, 2, c(1, 2), ppoints.col = "cyan3") 667s > 667s > xy2 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -2, 2), y2 = runif(200, -0.5, 0.5)) 667s > fac2 <- factor(xy2$x > 0) 667s > g9 <- s.class(xy2, fac = fac2, xax = 1, yax = 2:3, plot = FALSE) 667s > addpoint(g9, 1, 0, ppoints.col = "red", ppoints.cex = 2) 667s > addpoint(g9, c(1, -1), 0, ppoints.col = "red", ppoints.cex = 2) 667s > addpoint(g9, 0, c(1, -1), ppoints.col = "red", ppoints.cex = 2) 667s > 667s > # on a ADEgS: facets 667s > xy <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -1, 1)) 667s > posi <- factor(xy$x > 0) : factor(xy$y > 0) 667s > g10 <- s.class(xy, fac = posi, facets = posi, pellipses.col = 1:4, plabels.cex = 0, plegend.drawKey = FALSE, psub.cex = 0, plot = FALSE) 667s > addpoint(g10, 0, c(0.5, -0.5), ppoints.col = 1:4, ppoints.cex = 3) 668s > 668s > 668s > ############################## addsegment ############################## 668s > # on a 2D plot 668s > g11 <- s.label(cbind(rnorm(100), rnorm(100)), paxes.draw = TRUE, plot = FALSE) 668s > addsegment(g11, 0, 2, 0, -2, plines = list(col = "brown2", lwd = 3, lty = 2)) 668s > addsegment(g11, c(0, 1), 2, 0, -2, plines = list(col = "brown2", lwd = 3, lty = 2)) 668s > addsegment(g11, c(0, 1), 2, c(0, 1), -2, plines = list(col = c("cyan3", "brown2"), lwd = 3, lty = 2)) 668s > addsegment(g11, -2, -2, 2, 2, plines = list(col = "brown2", lwd = 3, lty = 2)) 668s > addsegment(g11, -2, 2, 2, -2, plines = list(col = "cyan3", lwd = 3, lty = 2)) 668s > 668s > g12 <- s.label(cbind(rnorm(100), rnorm(100)), ylab = "y axis label", plot = FALSE) 668s > addsegment(g12, 0, 2, 0, -2, plines = list(col = "brown2", lwd = 3, lty = 2)) 668s > addsegment(g12, -2, -2, 2, 2, plines = list(col = "brown2", lwd = 3, lty = 2)) 668s > addsegment(g12, -2, 2, 2, -2, plines = list(col = "cyan3", lwd = 3, lty = 2)) 668s > 668s > # on a 1D plot 668s > g13 <- s1d.density(rnorm(1000), paxes.draw = TRUE, ylab = "ylab", plot = FALSE) 668s > addsegment(g13, 2, 0, 2, 0.2, plines.col = 1, plines.lwd = 3) 668s > 668s > # on a ADEgS: juxtaposition 668s > g14 <- ADEgS(c(g11, g11), plot = FALSE) 668s > addsegment(g14, 1, 2, 1, -2, which = 1, plines.col = "brown2") 668s > addsegment(g14, 1, 2, 1, -2, which = 2, plines.col = "brown2") 668s > addsegment(g14, c(0, 1), 2, c(0, 1), -2, which = 1:2, plines.col = "brown2") 668s > addsegment(g14, 1, 2, c(0, 1), -2, which = 1:2, plines.col = "brown2") 669s > addsegment(g14, 1, 2, 1, -2, plines.col = "brown2") 669s > 669s > xy2 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -2, 2), y2 = runif(200, -0.5, 0.5)) 669s > fac2 <- factor(xy2$x > 0) 669s > g9 <- s.class(xy2, fac = fac2, xax = 1, yax = 2:3, plot = FALSE) 669s > addsegment(g9, 1, 0, 1, 0.5, plines.col = "red", plines.lwd = 2) 669s > addsegment(g9, 1, -1, 0, 1, plines.col = "red", plines.lwd = 2) 669s > addsegment(g9, 0, 1, -1, 1, plines.col = "red", plines.lwd = 2) 669s > 669s > # on a ADEgS: facets 669s > xy <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -1, 1)) 669s > posi <- factor(xy$x > 0) : factor(xy$y > 0) 669s > g10 <- s.class(xy, fac = posi, facets = posi, pellipses.col = 1:4, plabels.cex = 0, plegend.drawKey = FALSE, psub.cex = 0, plot = FALSE) 669s > addsegment(g10, c(-0.5, 0.5), c(0.5, -0.5), c(-0.5, 0.5), 1, plines.col = 1:4, plines.lwd = 3) 669s > 669s 669s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 669s Copyright (C) 2025 The R Foundation for Statistical Computing 669s Platform: powerpc64le-unknown-linux-gnu 669s 669s R is free software and comes with ABSOLUTELY NO WARRANTY. 669s You are welcome to redistribute it under certain conditions. 669s Type 'license()' or 'licence()' for distribution details. 669s 669s R is a collaborative project with many contributors. 669s Type 'contributors()' for more information and 669s 'citation()' on how to cite R or R packages in publications. 669s 669s Type 'demo()' for some demos, 'help()' for on-line help, or 669s 'help.start()' for an HTML browser interface to help. 669s Type 'q()' to quit R. 669s 669s > ## delete/remove this file when 'scatter' functions will be removed in ade4 669s > 669s > library(adegraphics) 670s Registered S3 methods overwritten by 'adegraphics': 670s method from 670s biplot.dudi ade4 670s kplot.foucart ade4 670s kplot.mcoa ade4 670s kplot.mfa ade4 670s kplot.pta ade4 670s kplot.sepan ade4 670s kplot.statis ade4 670s scatter.coa ade4 670s scatter.dudi ade4 670s scatter.nipals ade4 670s scatter.pco ade4 670s score.acm ade4 670s score.mix ade4 670s score.pca ade4 670s screeplot.dudi ade4 670s > pdf("ade4-functions.pdf") 670s > 670s > ##################### scatter.dudi 670s > data(deug, package = "ade4") 670s > dd1 <- ade4::dudi.pca(deug$tab, scannf = FALSE, nf = 4) 670s > scatter(dd1, posieig = "bottomright") 670s > scatter(dd1, posieig = "bottomright", plot = T, prop = TRUE) 671s > scatter(dd1, posieig = "none", plot = T) 671s > scatter(dd1, posieig = "bottomleft", plot = T) 671s > scatter(dd1, posieig = "topright", plot = T) 671s > scatter(dd1, posieig = "topleft", plot = T, eig.col = c("white", "blue", "red")) 672s > 672s > data(rhone, package = "ade4") 672s > dd1 <- ade4::dudi.pca(rhone$tab, nf = 4, scannf = FALSE) 672s > g1 <- scatter(dd1, sub = "Principal component analysis", row = list(plabels.optim = TRUE), col.pla.boxes.alpha = 0.5) 672s > g1[2, drop = TRUE] 672s > scatter(dd1, row = list(sub = "Principal component analysis", plabels.optim = TRUE), col.pla.boxes.alpha = 0.5) 672s > scatter(dd1, prop = TRUE, ppoints.cex = 0.2, density.plot = TRUE, row = list(threshold = 0.01)) 673s > 673s > scatter(dd1, posieig = "none") 673s > scatter(dd1, posieig = "bottomright") 673s > scatter(dd1, posieig = c(0.5, 0.5)) 674s > scatter(dd1, posieig = c(0.5, 0.5, 1, 1)) 674s > 674s > 674s > ##################### scatter.coa 674s > data(housetasks, package = "ade4") 674s > par(mfrow = c(2, 2)) 674s > dd2 <- ade4::dudi.coa(housetasks, scan = FALSE) 674s > ade4::scatter(dd2, method = 1, sub = "1 / Standard", posieig = "none") 674s > ade4::scatter(dd2, method = 2, sub = "2 / Columns -> averaging -> Rows", posieig = "none") 674s > ade4::scatter(dd2, method = 3, sub = "3 / Rows -> averaging -> Columns ", posieig = "none") 674s > par(mfrow = c(1, 1)) 674s > 674s > g1 <- scatter(dd2, method = 1, row.sub = "1 / Standard", posieig = "none", plot = FALSE) 674s > g2 <- scatter(dd2, method = 2, col.sub = "2 / Columns -> averaging -> Rows", posieig = "none", plot = FALSE) 674s > g3 <- scatter(dd2, method = 3, row.sub = "3 / Rows -> averaging -> Columns ", posieig = "none", plot = FALSE) 674s > G <- ADEgS(list(g1, g2, g3), layout = c(2, 2), plot = TRUE) 674s > 674s > scatter(dd2, posieig = "none") 674s > scatter(dd2, posieig = "bottomright") 675s > scatter(dd2, posieig = c(0.5, 0.5)) 675s > scatter(dd2, posieig = c(0.5, 0.5, 1, 1)) 675s > 675s > 675s > ##################### scatter.pco 675s > data(yanomama, package = "ade4") 675s > gen <- ade4::quasieuclid(as.dist(yanomama$gen)) 675s > gen1 <- ade4::dudi.pco(gen, scann = FALSE, nf = 3) 675s > scatter(gen1, posieig = "none") 675s > scatter(gen1, posieig = "bottomri") 675s > scatter(gen1, posieig = c(0.5, 0.5)) 675s > scatter(gen1, posieig = c(0.5, 0.5, 1, 1)) 675s > 675s > 675s > ##################### scatter.nipals 675s > data(doubs, package = "ade4") 675s > acp1 <- ade4::dudi.pca(doubs$env, scannf = FALSE, nf = 2) 675s > nip1 <- ade4::nipals(doubs$env) 676s > scatter(nip1, posieig = "none") 676s > scatter(nip1, posieig = "bottomri") 677s > scatter(nip1, posieig = c(0.5, 0.5)) 677s > scatter(nip1, posieig = c(0.5, 0.5, 1, 1)) 677s > 677s > 677s > ##################### score.inertia - plot.inertia 677s > data(housetasks, package = "ade4") 677s > coa2 <- ade4::dudi.coa(housetasks, scann = FALSE) 677s > res21 <- ade4::inertia(coa2, row = TRUE, col = FALSE) 677s > plot(res21, posieig = "none") 677s > plot(res21, posieig = "bottomri") 677s > plot(res21, posieig = c(0.5,0.5)) 677s > plot(res21, posieig = c(0.5, 0.5, 1, 1)) 677s > score(res21, posieig = "none") 677s > score(res21, posieig = "bottomri") 678s > score(res21, posieig = c(0.5, 0.5)) 678s > score(res21, posieig = c(0.5, 0.5, 1, 1)) 678s > 678s > res22 <- ade4::inertia(coa2, row = FALSE, col = TRUE) 678s > plot(res22, posieig = "none") 678s > plot(res22, posieig = "bottomri") 678s > plot(res22, posieig = c(0.5, 0.5)) 678s > plot(res22, posieig = c(0.5, 0.5, 1, 1)) 678s > score(res22, posieig = "none") 678s > score(res22, posieig = "bottomri") 678s > score(res22, posieig = c(0.5, 0.5)) 678s > score(res22, posieig = c(0.5, 0.5, 1, 1)) 679s > 679s > res23 <- ade4::inertia(coa2, row = TRUE, col = TRUE) 679s > plot(res23, posieig = "none") 679s > plot(res23, posieig = "bottomri") 679s > plot(res23, posieig = c(0.5, 0.5)) 679s > plot(res23, posieig = c(0.5, 0.5, 1, 1)) 679s > score(res23, posieig = "none") 679s > score(res23, posieig = "bottomri") 680s > score(res23, posieig = c(0.5, 0.5)) 680s > score(res23, posieig = c(0.5, 0.5, 2, 2)) 680s > 680s > data(doubs, package = "ade4") 680s > afc <- ade4::dudi.coa(doubs$fish, scannf = FALSE, nf = 5) 680s > ic <- ade4::inertia.dudi(afc, row.inertia=TRUE, col.inertia=TRUE) 680s > plot(ic, contrib = "abs", threshold = 0.1, type = "label") 680s > plot(ic, contrib="abs", threshold = 0.1, type = "label", xax = 3, yax = 4) 680s > 680s > 680s > ##################### plot.acm 680s > data(lascaux, package = "ade4") 680s > 680s > acm1 <- ade4::dudi.acm(lascaux$ornem, sca = FALSE) 680s > p1 <- proc.time() 680s > ade4::scatter(acm1) 680s > Tade4 <- proc.time() - p1 680s > 680s > p2 <- proc.time() 680s > plot(acm1, ppoints.cex = 0.3, plot = T) 681s > Tadegraphics <- proc.time() - p2 681s > ## faster calculus, longest display than for ade4 681s > 681s > 681s > ##################### plot.fca 681s > data(coleo, package = "ade4") 681s > coleo.fuzzy <- ade4::prep.fuzzy.var(coleo$tab, coleo$col.blocks) 681s 2 missing data found in block 1 681s 1 missing data found in block 3 681s 2 missing data found in block 4 681s > 681s > fca1 <- ade4::dudi.fca(coleo.fuzzy, scannf = FALSE, nf = 3) 681s > ade4::scatter(fca1) 682s > plot(fca1) 682s > 682s 682s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 682s Copyright (C) 2025 The R Foundation for Statistical Computing 682s Platform: powerpc64le-unknown-linux-gnu 682s 682s R is free software and comes with ABSOLUTELY NO WARRANTY. 682s You are welcome to redistribute it under certain conditions. 682s Type 'license()' or 'licence()' for distribution details. 682s 682s R is a collaborative project with many contributors. 682s Type 'contributors()' for more information and 682s 'citation()' on how to cite R or R packages in publications. 682s 682s Type 'demo()' for some demos, 'help()' for on-line help, or 682s 'help.start()' for an HTML browser interface to help. 682s Type 'q()' to quit R. 682s 682s > library(adegraphics) 683s Registered S3 methods overwritten by 'adegraphics': 683s method from 683s biplot.dudi ade4 683s kplot.foucart ade4 683s kplot.mcoa ade4 683s kplot.mfa ade4 683s kplot.pta ade4 683s kplot.sepan ade4 683s kplot.statis ade4 683s scatter.coa ade4 683s scatter.dudi ade4 683s scatter.nipals ade4 683s scatter.pco ade4 683s score.acm ade4 683s score.mix ade4 683s score.pca ade4 683s screeplot.dudi ade4 683s > pdf("adegraphics.pdf") 683s > 683s > xy <- cbind.data.frame(runif(7), runif(7)) 683s > g1 <- s.label(xy) 683s > 683s > data(olympic, package = "ade4") 683s > pca <- ade4::dudi.pca(olympic$tab, scan = FALSE) 683s > g2 <- s.corcircle(pca$co, lab = names(olympic$tab)) 683s > 683s > g3 <- ADEgS(list(g1, g2), rbind(c(0, 0, 0.5, 1), c(0.5, 0, 1, 1))) 683s > g4 <- ADEgS(list(g1, g2), layout = c(1, 2)) ## the same as g3 683s > g4b <- ADEgS(list(g1, g2)) ## the same as g3 683s > g5 <- s.label(xy, plabels.cex = 0, paxes.draw = TRUE, ppoints.col = "red") 683s > 683s > g6 <- superpose(g1, g5, plot = TRUE) 683s > g6b <- s.density(xy) 684s > g7 <- superpose(s.density(xy), g5, plot = TRUE) 684s > 684s > g8 <- superpose(s.label(xy, plabels.boxes.col = "orange", plot = FALSE), 684s + s.label(xy, plabels.cex = 0, paxes.draw = TRUE, ppoints.col = "red", plot = FALSE), 684s + plot = TRUE) 684s > 684s > g9 <- g8[1, drop = TRUE] 684s > class(g9) 684s [1] "S2.label" 684s attr(,"package") 684s [1] "adegraphics" 684s > g10 <- g8[1, drop = FALSE] 684s > class(g10) 684s [1] "ADEgS" 684s attr(,"package") 684s [1] "adegraphics" 684s > 684s > g11 <- ADEgS(list(g8, g3), positions = rbind(c(0, 0, 0.5, 1), c(0.5, 0, 1, 1))) 684s > 684s > ## cbindADEgS - rbindADEgS 684s > g12 <- cbindADEg(g1, g2, plot = TRUE) ## the same as g3 685s > g13 <- cbindADEg(g8, g3, plot = TRUE) ## the same as g11 685s > g14 <- rbindADEg(g8, g3, plot = TRUE) 685s > 685s > data(banque, package = "ade4") 685s > banque.acm <- ade4::dudi.acm(banque, scann = FALSE, nf = 3) 685s > g15 <- score(banque.acm, which = which(banque.acm$cr[, 1] > 0.2), plot = FALSE) 685s > g15 <- g15[[1]] 685s > cbindADEg(g15[[1]], g15[[2]], plot = TRUE) ## work on trellis object 685s > 685s > 685s 685s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 685s Copyright (C) 2025 The R Foundation for Statistical Computing 685s Platform: powerpc64le-unknown-linux-gnu 685s 685s R is free software and comes with ABSOLUTELY NO WARRANTY. 685s You are welcome to redistribute it under certain conditions. 685s Type 'license()' or 'licence()' for distribution details. 685s 685s R is a collaborative project with many contributors. 685s Type 'contributors()' for more information and 685s 'citation()' on how to cite R or R packages in publications. 685s 685s Type 'demo()' for some demos, 'help()' for on-line help, or 685s 'help.start()' for an HTML browser interface to help. 685s Type 'q()' to quit R. 685s 685s > library(ade4) 685s > library(adegraphics) 686s Registered S3 methods overwritten by 'adegraphics': 686s method from 686s biplot.dudi ade4 686s kplot.foucart ade4 686s kplot.mcoa ade4 686s kplot.mfa ade4 686s kplot.pta ade4 686s kplot.sepan ade4 686s kplot.statis ade4 686s scatter.coa ade4 686s scatter.dudi ade4 686s scatter.nipals ade4 686s scatter.pco ade4 686s score.acm ade4 686s score.mix ade4 686s score.pca ade4 686s screeplot.dudi ade4 686s 686s Attaching package: 'adegraphics' 686s 686s The following objects are masked from 'package:ade4': 686s 686s kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image, 686s s.label, s.logo, s.match, s.traject, s.value, table.value, 686s triangle.class 686s 686s > library(sp) 686s > library(lattice) 686s > 686s > pdf("nbgraph.pdf") 686s > 686s > if(require(spdep)) { 686s + data(elec88, package = "ade4") 686s + coords <- sp::coordinates(elec88$Spatial) 686s + 686s + xyplot(coords[, 2] ~ coords[, 1], 686s + panel = function(...) {adeg.panel.nb(elec88$nb, coords)}) 686s + 686s + g1 <- s.label(coords, nb = elec88$nb, porigin.include = F, plabels.cex = 0.7, 686s + ppoints.cex = 2, Sp = elec88$Spatial, pSp.col = "red", pSp.alpha = 0.5) 686s + } 686s Loading required package: spdep 686s Loading required package: spData 686s To access larger datasets in this package, install the spDataLarge 686s package with: `install.packages('spDataLarge', 686s repos='https://nowosad.github.io/drat/', type='source')` 686s Loading required package: sf 686s Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.0; sf_use_s2() is TRUE 686s 686s Attaching package: 'spdep' 686s 686s The following object is masked from 'package:ade4': 686s 686s mstree 686s 687s > 687s 687s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 687s Copyright (C) 2025 The R Foundation for Statistical Computing 687s Platform: powerpc64le-unknown-linux-gnu 687s 687s R is free software and comes with ABSOLUTELY NO WARRANTY. 687s You are welcome to redistribute it under certain conditions. 687s Type 'license()' or 'licence()' for distribution details. 687s 687s R is a collaborative project with many contributors. 687s Type 'contributors()' for more information and 687s 'citation()' on how to cite R or R packages in publications. 687s 687s Type 'demo()' for some demos, 'help()' for on-line help, or 687s 'help.start()' for an HTML browser interface to help. 687s Type 'q()' to quit R. 687s 687s > library(ade4) 687s > library(adegraphics) 687s Registered S3 methods overwritten by 'adegraphics': 687s method from 687s biplot.dudi ade4 687s kplot.foucart ade4 687s kplot.mcoa ade4 687s kplot.mfa ade4 687s kplot.pta ade4 687s kplot.sepan ade4 687s kplot.statis ade4 687s scatter.coa ade4 687s scatter.dudi ade4 687s scatter.nipals ade4 687s scatter.pco ade4 687s score.acm ade4 687s score.mix ade4 687s score.pca ade4 687s screeplot.dudi ade4 687s 687s Attaching package: 'adegraphics' 687s 687s > library(sp) 687s The following objects are masked from 'package:ade4': 687s 687s kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image, 687s s.label, s.logo, s.match, s.traject, s.value, table.value, 687s triangle.class 687s 687s > pdf("panelSpatial.pdf") 687s > 687s > ## ex1 687s > data(mafragh, package = "ade4") 687s > dfxy1 <- coordinates(mafragh$Spatial) 687s > g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0) 688s > 688s > 688s > ## ex2 688s > data(meuse, package = "sp") 688s > coordinates(meuse) <- ~ x + y 688s > data(meuse.grid, package = "sp") 688s > m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid) 688s > data(meuse.riv) 688s > meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv"))) 688s > 688s > scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar()) 688s > text11 <- list("sp.text", c(179900, 329700), "0") 688s > text21 <- list("sp.text", c(180400, 329700), "500 m") 688s > arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow()) 688s > river <- list("sp.polygons", meuse.sr, fill = "lightblue") 688s > dfxy2 <- as.data.frame(coordinates(meuse)) 688s > g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m) 688s > 688s > fac <- meuse@data$ffreq 688s > levels(fac)[1] <- "1 in 2 years" 688s > levels(fac)[2] <- "1 in 10 years" 688s > levels(fac)[3] <- "1 in 50 years" 688s > arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400) 688s > scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black")) 688s > text12 <- list("sp.text", c(178050, 333700), "0") 688s > text22 <- list("sp.text", c(178550, 333700), "500 m") 688s > g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4), 688s + pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0, 688s + porigin.include = FALSE, Sp = meuse.sr) 688s > 688s > ## ex3 688s > if(require(Guerry)) { 688s + data(gfrance85) 688s + 688s + dfxy4 <- coordinates(gfrance85) 688s + region.names <- data.frame(gfrance85)[, 5] 688s + col.region <- colors()[c(149, 254, 468, 552, 26)] 688s + g4 <- s.class(dfxy4, region.names, ellip = 0, star = 0, col = col.region, Sp = gfrance85, pSp.col = col.region[region.names], porig.inclu = F) 688s + } 688s Loading required package: Guerry 688s > 688s > ## ex4 688s > library(sp) 688s > library(lattice) 688s > 688s > data(elec88, package = "ade4") 688s > sp <- elec88$Spatial 688s > 688s > g5 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(SpObject = sp, col = "black", border = "black")}) 688s > g6 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(sp, col = 1:14, border = "black")}) 688s > g7 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], aspect = "iso", panel = function(...) {sp.polygons(sp, col = "black", fill = 1:5)}) 688s > g8 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(SpObject = sp, col = "black", border = "blue")}) 688s > g9 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(SpObject = sp, col = "black", border = "blue")}) 688s > #g10 <- s.label(cbind(-80, 35), Sp = nc) 688s > #g11 <- s.label(cbind(-80, 35), Sp = sp) 688s > 688s > 688s > ## ex5 688s > data(jv73, package = "ade4") 688s > g12 <- s.label(jv73$xy, Sp = jv73$Spatial) 689s > g13 <- s.label(jv73$xy, Sp = jv73$Spatial, pSp.col = "red") 689s > 689s > spoints <- SpatialPoints(jv73$xy) 689s > g14 <- s.label(jv73$xy, Sp = spoints, plab.cex = 0, ppoin.cex = 0, pSp.col = 1) 689s > 689s > sgrid <- SpatialGrid(GridTopology(c(0, 0), c(1, 1), c(3, 5))) 689s > xyplot(0:5 ~ 0:3, panel = function(...) sp.grid(sgrid, col = 1:2)) 689s > 689s > nc <- SpatialGridDataFrame(getGridTopology(sgrid), data = data.frame(matrix(1:15, ncol = 1))) 689s > xyplot(0:5 ~ 0:3, panel = function(...) sp.grid(nc, col = 1, at = pretty(rnorm(15), 2), col.region = 2:3)) 689s > xyplot(0:5 ~ 0:3, panel = function(...) adeg.panel.Spatial(nc, col = 1:3)) 689s > xyplot(0:5 ~ 0:3, panel = function(...) adeg.panel.Spatial(nc, col = 1:2)) 689s > 689s > 689s > ## ex6 689s > mysp <- SpatialPointsDataFrame(matrix(rnorm(20), 10), data.frame(matrix(rnorm(20), 10))) 689s > s.Spatial(mysp) 689s > s.Spatial(mysp, col = c("red", "blue")) 689s > s.Spatial(mysp, ppoints.cex = 2) 689s > s.Spatial(mysp, ppoints.alpha = 0.5) 689s > s.Spatial(mysp, symbol = "circle") 689s > s.Spatial(mysp, method = "color", ppalette.quanti = colorRampPalette(c("red", "white", "blue"))) 689s > 689s 689s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 689s Copyright (C) 2025 The R Foundation for Statistical Computing 689s Platform: powerpc64le-unknown-linux-gnu 689s 689s R is free software and comes with ABSOLUTELY NO WARRANTY. 689s You are welcome to redistribute it under certain conditions. 689s Type 'license()' or 'licence()' for distribution details. 689s 689s R is a collaborative project with many contributors. 689s Type 'contributors()' for more information and 689s 'citation()' on how to cite R or R packages in publications. 689s 689s Type 'demo()' for some demos, 'help()' for on-line help, or 689s 'help.start()' for an HTML browser interface to help. 689s Type 'q()' to quit R. 689s 690s > library(ade4) 690s > library(adegraphics) 690s Registered S3 methods overwritten by 'adegraphics': 690s method from 690s biplot.dudi ade4 690s kplot.foucart ade4 690s kplot.mcoa ade4 690s kplot.mfa ade4 690s kplot.pta ade4 690s kplot.sepan ade4 690s kplot.statis ade4 690s scatter.coa ade4 690s scatter.dudi ade4 690s scatter.nipals ade4 690s scatter.pco ade4 690s score.acm ade4 690s score.mix ade4 690s score.pca ade4 690s screeplot.dudi ade4 690s 690s Attaching package: 'adegraphics' 690s 690s > pdf("parameter.pdf") 690s The following objects are masked from 'package:ade4': 690s 690s kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image, 690s s.label, s.logo, s.match, s.traject, s.value, table.value, 690s triangle.class 690s 690s > 690s > adegparold <- adegpar() 690s > b1 <- length(adegraphics:::separation(plines = list(col = "blue"), plab.bo.dra = FALSE, plab = list(orien = F))$rest) == 0 690s > b2 <- length(adegraphics:::separation(plines = list(col = "blue", lwd = c(1:5)), parr.end = NA, plab.boxes.dr = FALSE)$rest) == 0 690s > b3 <- length(adegraphics:::separation(plot.li = list(col = "blue", lwd = c(1:5)), par.end = NA, pl.boxes.draw = FALSE, pattern = 1)$rest) == 2 690s > b4 <- length(adegraphics:::separation(plot.li = list(col = "blue", lwd = c(1:5)), par.end = NA, pl.boxes.draw = FALSE, pattern = 0)$rest) == 2 690s > b5 <- length(adegraphics:::separation()) == 2 690s > b6 <- length(adegraphics:::separation(par.sub.text = list("lineheight" = 5), pattern = 1)$rest) == 0 690s > b7 <- names(adegraphics:::separation(toto = "rienavoir!")$rest) == "toto" 690s > b8 <- names(adegraphics:::separation(toto = "rienavoir!", pattern = 1)$rest) == "toto" 690s > 690s > l1 <- list(parrow = list(col = "blue", lwd = c(1:5), end = NA), plboxes.draw = FALSE, pattern = 1) 690s > sep1 <- adegraphics:::separation(l1) ## no recognition of "pattern" in a list 690s > 690s > l2 <- list("parrow.lwd", "plboxes.draw") 690s > sep2 <- adegraphics:::separation(l2) 690s > 690s > sep3 <- adegraphics:::separation("plboxes" = list("draw" = FALSE, "col")) 690s > sep4 <- adegraphics:::separation("plboxes" = list("draw" = FALSE, "col" = 2)) 690s > sep5 <- adegraphics:::separation(pla.box = list(col = 1:5)) 690s > sep6 <- adegraphics:::separation(pla.box.col = c(1:5)) 690s > sep7 <- adegraphics:::separation(pla = list(box.col = 1:5)) ## don't match 690s > 690s > 690s > ## adegpar test 690s > ad1 <- adegpar() 690s > ad2 <- adegpar("paxes.draw") 690s > ad3 <- adegpar("paxes.draw", "psub.cex") 690s > 690s > ad4 <- adegpar("psub.cex" = 5) 690s > ad5 <- adegpar("psub.cex" = 5, paxes.draw = FALSE) 690s > ad6 <- adegpar("psub") 690s > ad7 <- adegpar("psub.cex", "plabe.boxes") 690s > 690s > ad8 <- adegpar(ppoints = list(col = "yellow"), pgrid.space = 4, plines = list(lwd = c(1:5))) 690s > ad9 <- adegpar(ppoints = list(col = "red"), pgrid = list(nint = 12), plines = list(lwd = c(1:5))) 690s > ad10 <- adegpar("ppoints.col", "pgrid.nint", "plines") 690s > 690s > ad11 <- adegpar(paxes = list("x"), pgrid = list("nint", "col")) 690s > ad12 <- adegpar(list(pellip = list(col = "red"), grid.nint = 8, plines = list(lwd = c(1:5)))) 690s > ad13 <- adegpar(paxes = list("x"), pgrid = list("nint", "col"), "plines", "pellipse") 690s > 690s > ad14 <- adegpar(plegend.drawKey = FALSE) 690s > ad15 <- adegpar(list(paxes = list(col = "white"), pgrid.nint = 6, plines = list(lwd = c(1:5)))) 690s > ad16 <- adegpar(paxes = list(x = list(draw = TRUE))) 690s > 690s > adegpar(adegparold) 690s > 690s > ## merging list 690s > l3 <- list(plabels = list(boxes = list(col = "white", alpha = 1)), plabels = list(cex = 2), plabels = list(col = "red")) 690s > adegraphics:::.mergingList(l3) 690s $plabels 690s $plabels$boxes 690s $plabels$boxes$col 690s [1] "white" 690s 690s $plabels$boxes$alpha 690s [1] 1 690s 690s 690s $plabels$cex 690s [1] 2 690s 690s $plabels$col 690s [1] "red" 690s 690s 690s > adegraphics:::.mergingList(list(plabels = list(cex = 3))) 690s $plabels 690s $plabels$cex 690s [1] 3 690s 690s 690s > 690s > 690s > ## update parameters in graphics 690s > cha <- rep(LETTERS, length.out = 100) 690s > xy <- cbind.data.frame(runif(length(cha)), runif(length(cha))) 690s > g1 <- s.label(xy, labels = cha, paxes.draw = TRUE, plabels.cex = runif(length(cha), 0.5, 1.5)) 690s > update(g1, paxes = list(aspect = "fill", draw = TRUE, x = list(draw = FALSE)), 690s + pgrid = list(col = "black", lwd = 2, lty = 5), 690s + plabels = list(col = 1:4, alpha = 0.5, cex = 2, boxes = list(border = "blue", col = "antiquewhite", alpha = 0.2, lwd = 2.5, lty = 5))) 690s > 690s > g2 <- s.label(xy, labels = cha) 691s > update(g2, paxes.draw = FALSE, pgrid = list(col = "blue", lwd = 2, lty = 5, text = list(pos = "bottomright", cex = 2, col = "green"))) 691s > update(g2, porigin = list(alpha = 0.5, col = "red", lty = 5 , lwd = 2, origin = c(0.6, 0.1)), pgrid.lwd = 0.5) 691s > update(g2, psub = list(text = "parameters", cex = 2, col = "red", position = "topright")) 691s > update(g2, plabels.cex = 0, ppoints = list(alpha = 0.4, cex = 2, col = "red", fill = "blue", pch = 21)) 691s > 691s > 691s > ## from tdr641 691s > data(doubs, package = "ade4") 691s > dudi1 <- ade4::dudi.pca(doubs$env, scale = T, scannf = F, nf = 3) 691s > dudi2 <- ade4::dudi.pca(doubs$fish, scale = T, scannf = F, nf = 2) 691s > coin1 <- ade4::coinertia(dudi1, dudi2, scannf = F, nf = 2) 691s > g3 <- s.arrow(coin1$l1, plabels.cex = .87) 691s > update(g3, plines = list(col = "blue", lwd = 2, lty = 3), parr.end = "both", parr = list(angle = 25, length = 0.5)) 691s > 691s > ## with spatial object 691s > data(elec88, package = "ade4") 691s > g4 <- s.label(elec88$xy, label = as.character(1:nrow(elec88$xy)), porigin.include = FALSE, Sp = elec88$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(5), pgrid.draw = TRUE) 692s > update(g4, pSp = list(col = "yellow", border = "blue", lwd = 2, lty = 5, alpha = 0.01)) ## don't match : to solve 692s > 692s > ## plabels parameter 692s > data(tortues, package = "ade4") 692s > pturtles <- tortues 692s > names(pturtles) <- c("length", "width", "height", "sex") 692s > sex <- pturtles$sex 692s > sexcol <- ifelse(sex == "M", "blue", "red") 692s > measures <- pturtles[, 1:3] 692s > pca1 <- ade4::dudi.pca(measures, scann = FALSE, nf = 3) 692s > g5 <- scatter(pca1, row.plabel.cex = 0, col.plabel.cex = c(1, 2, 3), posieig = "none", col.plabel.col = c("red", "blue", "green")) 692s > 692s 692s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 692s Copyright (C) 2025 The R Foundation for Statistical Computing 692s Platform: powerpc64le-unknown-linux-gnu 692s 692s R is free software and comes with ABSOLUTELY NO WARRANTY. 692s You are welcome to redistribute it under certain conditions. 692s Type 'license()' or 'licence()' for distribution details. 692s 692s R is a collaborative project with many contributors. 692s Type 'contributors()' for more information and 692s 'citation()' on how to cite R or R packages in publications. 692s 692s Type 'demo()' for some demos, 'help()' for on-line help, or 692s 'help.start()' for an HTML browser interface to help. 692s Type 'q()' to quit R. 692s 692s > library(adegraphics) 693s Registered S3 methods overwritten by 'adegraphics': 693s method from 693s biplot.dudi ade4 693s kplot.foucart ade4 693s kplot.mcoa ade4 693s kplot.mfa ade4 693s kplot.pta ade4 693s kplot.sepan ade4 693s kplot.statis ade4 693s scatter.coa ade4 693s scatter.dudi ade4 693s scatter.nipals ade4 693s scatter.pco ade4 693s score.acm ade4 693s score.mix ade4 693s score.pca ade4 693s screeplot.dudi ade4 693s > pdf("s.arrow.pdf") 693s > 693s > ## ex1 : from tdr641 693s > data(doubs, package = "ade4") 693s > dudi1 <- ade4::dudi.pca(doubs$env, scale = T, scan = F, nf = 3) 693s > dudi2 <- ade4::dudi.pca(doubs$fish, scale = T, scan = F, nf = 2) 693s > coin1 <- ade4::coinertia(dudi1, dudi2, scan = F, nf = 2) 693s > g1 <- s.arrow(coin1$l1, plabels.cex = 0.87) 693s > g2 <- s.arrow(coin1$c1, plabels.cex = 1) 693s > 693s > ## ex2 : from bs81 693s > data(granulo, package = "ade4") 693s > w <- data.frame(t(apply(granulo$tab, 1, function(x) x / sum(x)))) 693s > g3 <- s.arrow(ade4::dudi.pca(data.frame(w), scan = F, nf = 2)$co) 693s > 693s > wtr <- data.frame(t(w)) 693s > wmoy <- data.frame(matrix(apply(wtr, 1, mean), 1)) 693s > dudi3 <- ade4::dudi.pca(w, scal = FALSE, scan = FALSE) 693s > wmoy <- ade4::suprow(dudi3, wmoy)$lisup 693s > 693s > g4 <- s.arrow(dudi3$c1, plabels.cex = 1.5) 693s > g4 <- s.distri(dudi3$c1, wtr, starSize = 0.33, ellipseSize = 0, add = TRUE, plabels.cex = 1) 693s > g4 <- s.label(wmoy, ppoint.cex = 5, plabels.cex = 0, add = TRUE) 694s > 694s > ## ex3 694s > data(deug, package = "ade4") 694s > pca1 <- ade4::dudi.pca(deug$tab, scal = FALSE, center = deug$cent, scan = FALSE) 694s > g5 <- s.arrow(40 * pca1$c1) 694s > 694s > ## ex4 694s > xy <- cbind(rnorm(50), rnorm(50)) 694s > g6 <- s.arrow(xy, plabels.cex = 0.9, parrows = list(angle = 20)) 694s > 694s 694s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 694s Copyright (C) 2025 The R Foundation for Statistical Computing 694s Platform: powerpc64le-unknown-linux-gnu 694s 694s R is free software and comes with ABSOLUTELY NO WARRANTY. 694s You are welcome to redistribute it under certain conditions. 694s Type 'license()' or 'licence()' for distribution details. 694s 694s R is a collaborative project with many contributors. 694s Type 'contributors()' for more information and 694s 'citation()' on how to cite R or R packages in publications. 694s 694s Type 'demo()' for some demos, 'help()' for on-line help, or 694s 'help.start()' for an HTML browser interface to help. 694s Type 'q()' to quit R. 694s 694s > library(adegraphics) 694s Registered S3 methods overwritten by 'adegraphics': 694s method from 694s biplot.dudi ade4 694s kplot.foucart ade4 694s kplot.mcoa ade4 694s kplot.mfa ade4 694s kplot.pta ade4 694s kplot.sepan ade4 694s kplot.statis ade4 694s scatter.coa ade4 694s scatter.dudi ade4 694s scatter.nipals ade4 694s scatter.pco ade4 694s score.acm ade4 694s score.mix ade4 694s score.pca ade4 694s screeplot.dudi ade4 694s > pdf("s.class.pdf") 694s > 694s > xy0 <- cbind.data.frame(x = runif(20, -1, 1), y = runif(20, -1, 6)) 694s > basic <- s.class(xy0, fac = factor(rep(c("A", "B"), le = 20)), chull = 0, star = 0) 694s > 694s > xy1 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -1, 6)) 694s > fac1 <- factor(xy1$x > 0) : factor(xy1$y > 0) 694s > g1 <- s.class(xy1, fac = fac1, storeData = F, col = 1:4, pbackground.box = T, pbackground.col = grey(0.85), paxes.draw = T, ell = 0) 695s > 695s > ## multiaxis 695s > xy2 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -2, 2), y2 = runif(200, -0.5, .5)) 695s > fac2 <- factor(xy2$x > 0) 695s > g2 <- s.class(xy2, fac = fac2, xax = 1, yax = 2:3, storeData = F, plot = F) 695s > print(g2) 695s > 695s > ## insertion 695s > print(ADEgS(list(g1, g2), posi = rbind(c(0, 0, 1, 1), c(0.7, 0.5, 1, 0.9)))) 695s > 695s > ## color test 695s > g3 <- s.class(xy1, fac = fac2, psub.text = "Graphic 3", "ppoints.col" = 1:5, plabels.boxes = list(col = "white", alpha = 0.8), pellipses.col = 1:5, col = 1:5) 695s > 695s > ## test convex hull and parameters 695s > xy4 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -1, 1)) 695s > fac4 <- factor(xy4$x > 0) : factor(xy4$y > 0) 695s > col <- c("black", "red", "green", "blue") 695s > g4 <- s.class(xy4, fac4, ppoints.cex = 1.5, chull = T, ellipseSize = 0, starSize = 0, ppolygon = list(border = 4:1, col = 1:4, lty = 1:4, lwd = 2, alpha = 0.4)) 695s > 695s > 695s 695s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 695s Copyright (C) 2025 The R Foundation for Statistical Computing 695s Platform: powerpc64le-unknown-linux-gnu 695s 695s R is free software and comes with ABSOLUTELY NO WARRANTY. 695s You are welcome to redistribute it under certain conditions. 695s Type 'license()' or 'licence()' for distribution details. 695s 695s R is a collaborative project with many contributors. 695s Type 'contributors()' for more information and 695s 'citation()' on how to cite R or R packages in publications. 695s 695s Type 'demo()' for some demos, 'help()' for on-line help, or 695s 'help.start()' for an HTML browser interface to help. 695s Type 'q()' to quit R. 695s 695s > library(adegraphics) 696s Registered S3 methods overwritten by 'adegraphics': 696s method from 696s biplot.dudi ade4 696s kplot.foucart ade4 696s kplot.mcoa ade4 696s kplot.mfa ade4 696s kplot.pta ade4 696s kplot.sepan ade4 696s kplot.statis ade4 696s scatter.coa ade4 696s scatter.dudi ade4 696s scatter.nipals ade4 696s scatter.pco ade4 696s score.acm ade4 696s score.mix ade4 696s score.pca ade4 696s screeplot.dudi ade4 696s > pdf("s.corcircle.pdf") 696s > data(olympic, package = "ade4") 696s > 696s > dudi1 <- ade4::dudi.pca(olympic$tab, scan = FALSE) # a normed PCA 696s > g1 <- s.corcircle(dudi1$co, lab = names(olympic$tab)) 696s > 696s > g2 <- s.corcircle(dudi1$co, lab = names(olympic$tab), fullcircle = T) 696s > g3 <- s.corcircle(dudi1$co, lab = names(olympic$tab), fullcircle = FALSE) 696s > g4 <- s.corcircle(dudi1$co, lab = names(olympic$tab), pback.col = "red", pbackground.box = FALSE) 696s > 696s 696s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 696s Copyright (C) 2025 The R Foundation for Statistical Computing 696s Platform: powerpc64le-unknown-linux-gnu 696s 696s R is free software and comes with ABSOLUTELY NO WARRANTY. 696s You are welcome to redistribute it under certain conditions. 696s Type 'license()' or 'licence()' for distribution details. 696s 696s R is a collaborative project with many contributors. 696s Type 'contributors()' for more information and 696s 'citation()' on how to cite R or R packages in publications. 696s 696s Type 'demo()' for some demos, 'help()' for on-line help, or 696s 'help.start()' for an HTML browser interface to help. 696s Type 'q()' to quit R. 696s 696s > library(adegraphics) 696s Registered S3 methods overwritten by 'adegraphics': 696s method from 696s biplot.dudi ade4 696s kplot.foucart ade4 697s kplot.mcoa ade4 697s kplot.mfa ade4 697s kplot.pta ade4 697s kplot.sepan ade4 697s kplot.statis ade4 697s scatter.coa ade4 697s scatter.dudi ade4 697s scatter.nipals ade4 697s scatter.pco ade4 697s score.acm ade4 697s score.mix ade4 697s score.pca ade4 697s screeplot.dudi ade4 697s > pdf("s.density.pdf") 697s > 697s > xx1 <- rnorm(1000, 1, 2) 697s > yy1 <- rnorm(1000, 1, 2) 697s > 697s > g1 <- s.density(cbind(xx1, yy1), paxes.draw = T, gridsize = c(40, 40)) 697s > g2 <- s.density(cbind(xx1, yy1), paxes.draw = T, gridsize = c(80, 80), col = colorRampPalette(c("red", "blue"))(58), storeData = FALSE, region = TRUE) 697s > g3 <- s.density(cbind(yy1 + 3, xx1 + 3), gridsize = c(400, 400)) 697s > g4 <- s.density(cbind(xx1, yy1), paxes.draw = T, gridsize = c(200, 200), add = TRUE) 697s > g5 <- s.density(cbind(c(rnorm(50000, 1, 1), rnorm(50000, -1, 1)), c(rnorm(50000, -1, 0.5), rnorm(50000, 1, 0.5))), paxes.draw = T, gridsize = c(200, 200), region = TRUE, contour = TRUE, plabels.cex = 1, plabels.srt = "vertial") 698s > g6 <- s.density(cbind(rnorm(300, 3, 0.3), rnorm(300, -2, 0.5)), gridsize = c(500, 500), thres = 0.01, nr = 10, regions = list(alpha = 0.5), col = colorRampPalette(c("red", "blue"))(108)) 698s > g7 <- s.density(cbind(c(rnorm(50000, 1, 1), rnorm(50000, -1, 1)), c(rnorm(50000, -1, 0.5), rnorm(50000, 1, 0.5))), paxes.draw = T, gridsize = c(100, 100), region = TRUE, contour = TRUE, plabels.cex = 1, nclass = 5) 699s > 699s 699s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 699s Copyright (C) 2025 The R Foundation for Statistical Computing 699s Platform: powerpc64le-unknown-linux-gnu 699s 699s R is free software and comes with ABSOLUTELY NO WARRANTY. 699s You are welcome to redistribute it under certain conditions. 699s Type 'license()' or 'licence()' for distribution details. 699s 699s R is a collaborative project with many contributors. 699s Type 'contributors()' for more information and 699s 'citation()' on how to cite R or R packages in publications. 699s 699s Type 'demo()' for some demos, 'help()' for on-line help, or 699s 'help.start()' for an HTML browser interface to help. 699s Type 'q()' to quit R. 699s 699s > library(adegraphics) 699s Registered S3 methods overwritten by 'adegraphics': 699s method from 699s biplot.dudi ade4 699s kplot.foucart ade4 699s kplot.mcoa ade4 699s kplot.mfa ade4 699s kplot.pta ade4 699s kplot.sepan ade4 699s kplot.statis ade4 699s scatter.coa ade4 699s scatter.dudi ade4 699s scatter.nipals ade4 699s scatter.pco ade4 699s score.acm ade4 699s score.mix ade4 699s score.pca ade4 699s screeplot.dudi ade4 699s > pdf("s.distri.pdf") 699s > 699s > xy5 <- cbind.data.frame(x = runif(200, -1, 1), y = runif(200, -1, 1)) 699s > w1 <- as.numeric((xy5$x > 0) & (xy5$y > 0)) 699s > w2 <- ((xy5$x > 0) & (xy5$y < 0)) * (1 - xy5$y) * xy5$x 699s > w3 <- ((xy5$x < 0) & (xy5$y > 0)) * (1 - xy5$x) * xy5$y 699s > w4 <- ((xy5$x < 0) & (xy5$y < 0)) * xy5$y * xy5$x 699s > distri <- data.frame(a = w1 / sum(w1), b = w2 / sum(w2), c = w3 / sum(w3), d = w4 / sum(w4)) 699s > g5 <- s.distri(xy5, distri, plabels.boxes = list(col = "white", alpha = 1), plabels.cex = 2, plabels.col = 1:5) 700s > 700s > data(rpjdl, package = "ade4") 700s > xy6 <- ade4::dudi.coa(rpjdl$fau, scan = FALSE)$li + 3 700s > g6 <- s.distri(xy6, rpjdl$fau[, 5], ellipseSize = 1.5, psub = list(text = rpjdl$frlab[5], cex = 2, pos = c(0.2, 0.1))) 700s > g7 <- s.distri(xy6, rpjdl$fau[, 5], ellipseSize = 1.5, psub = list(text = rpjdl$frlab[5], cex = 2, pos = c(0.2, 0.1)), porigin = list(include = FALSE), pellipses.axes.col = "blue") 700s > 700s > ## test add 700s > g8 <- s.distri(xy6, rpjdl$fau[, 5], ellipseSize = 1.5, psub = list(text = rpjdl$frlab[5], cex = 2, pos = c(0.2, 0.1)), porigin.include = FALSE, pellipses = list(col = "blue")) 700s > g9 <- s.distri(xy6, rpjdl$fau[, 12], ellipseSize = 1.5, psub = list(text = rpjdl$frlab[5], cex = 2, pos = c(0.2, 0.1)), porigin.include = FALSE, pellipses = list(col = "red"), add = TRUE) 700s > show(g9) ## g8 is a superposition, an ADEgS object 700s > 700s > ## add 700s > index <- c(1, 5, 8, 20, 21, 23, 26, 33, 36, 44, 47, 49) 700s > col <- colorRampPalette(c("blue", "red", "orange"))(49) 700s > s.distri(xy6, rpjdl$fau[, 1], ellipseSize = 1, starSize = 0, porigin.include = FALSE, pellipses = list(col = col[1], alpha = 0.3)) 700s > for(i in index[-1]) 700s + s.distri(xy6, rpjdl$fau[, i], ellipseSize = 1, starSize = 0, porigin.include = FALSE, pellipses = list(col = col[i], alpha = 0.3), add = TRUE) 700s > 700s > current <- get("currentadeg", env = adegraphics:::.ADEgEnv) 700s > print(current[[6]]) 700s > length(current) == length(index) 700s [1] TRUE 700s > 700s 700s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 700s Copyright (C) 2025 The R Foundation for Statistical Computing 700s Platform: powerpc64le-unknown-linux-gnu 700s 700s R is free software and comes with ABSOLUTELY NO WARRANTY. 700s You are welcome to redistribute it under certain conditions. 700s Type 'license()' or 'licence()' for distribution details. 700s 700s R is a collaborative project with many contributors. 700s Type 'contributors()' for more information and 700s 'citation()' on how to cite R or R packages in publications. 700s 700s Type 'demo()' for some demos, 'help()' for on-line help, or 700s 'help.start()' for an HTML browser interface to help. 700s Type 'q()' to quit R. 700s 701s > library(adegraphics) 701s Registered S3 methods overwritten by 'adegraphics': 701s method from 701s biplot.dudi ade4 701s kplot.foucart ade4 701s kplot.mcoa ade4 701s kplot.mfa ade4 701s kplot.pta ade4 701s kplot.sepan ade4 701s kplot.statis ade4 701s scatter.coa ade4 701s scatter.dudi ade4 701s scatter.nipals ade4 701s scatter.pco ade4 701s score.acm ade4 701s score.mix ade4 701s score.pca ade4 701s screeplot.dudi ade4 701s > library(sp) 701s > pdf("s.image.pdf") 701s > 701s > ## ex1 701s > xy <- data.frame(expand.grid(-3:3, -3:3)) 701s > names(xy) <- c("x", "y") 701s > z <- (1 / sqrt(2)) * exp(-(xy$x ^ 2 + xy$y ^ 2) / 2) 701s > s.image(xy, z) 701s > s.image(xy, z, grid = 20) 701s > s.image(xy, z, grid = 500) 702s > 702s > ## ex2 702s > Sr1 <- Polygon(cbind(c(0, 1, 2, 1, 2, 0 , -2, -1, -2, -1, 0), c(2.5, 1.5, 2, 0, -2, -1, -2, 0, 2, 1.5, 2.5))) 702s > Srs1 <- Polygons(list(Sr1), ID = "stars") 702s > SPp1 <- SpatialPolygons(list(Srs1)) 702s > xy1 <- cbind(rnorm(100, 0, 1), rnorm(100, 0, 1.5)) 702s > g1 <- s.image(xy1, runif(100), outsideLimits = SPp1) 702s > 702s > ## ex3 702s > Sr2 <- Polygon(cbind(c(-0.5, 0.5, 0.5, -0.5, -0.5), c(0, 0, 1 ,1, 0)), hole = TRUE) 702s > Srs2 <- Polygons(list(Sr1, Sr2), ID = "hole") 702s > SPp2 <- SpatialPolygons(list(Srs2)) 702s > xy2 <- cbind(c(rnorm(2000, 1, 0.25), rnorm(3000, -1, 1.5)), c(rnorm(2000, 1, 0.5), rnorm(3000, -1, 3))) 702s > z <- c(rnorm(2000, 12, 1), rnorm(3000, 1, 2)) 702s > g2 <- s.image(xy2, z, outsideLimits = SPp2, grid = 500, xlim = c(-2.5, 2.5), ylim = c(-2, 3)) 703s > 704s 704s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 704s Copyright (C) 2025 The R Foundation for Statistical Computing 704s Platform: powerpc64le-unknown-linux-gnu 704s 704s R is free software and comes with ABSOLUTELY NO WARRANTY. 704s You are welcome to redistribute it under certain conditions. 704s Type 'license()' or 'licence()' for distribution details. 704s 704s R is a collaborative project with many contributors. 704s Type 'contributors()' for more information and 704s 'citation()' on how to cite R or R packages in publications. 704s 704s Type 'demo()' for some demos, 'help()' for on-line help, or 704s 'help.start()' for an HTML browser interface to help. 704s Type 'q()' to quit R. 704s 704s > library(adegraphics) 704s Registered S3 methods overwritten by 'adegraphics': 704s method from 704s biplot.dudi ade4 704s kplot.foucart ade4 704s kplot.mcoa ade4 704s kplot.mfa ade4 704s kplot.pta ade4 704s kplot.sepan ade4 704s kplot.statis ade4 704s scatter.coa ade4 704s scatter.dudi ade4 704s scatter.nipals ade4 704s scatter.pco ade4 704s score.acm ade4 704s score.mix ade4 704s score.pca ade4 704s screeplot.dudi ade4 704s > library(grid) 704s > pdf("s.label.pdf") 704s > 704s > x0 <- runif(50, -2, 2) 704s > y0 <- runif(50, -2, 2) 704s > z <- x0 ^ 2 + y0 ^ 2 704s > dfxy1 <- data.frame(x0, y0) 704s > g1 <- s.label(dfxy1, label = as.character(z < 1), paxes.draw = TRUE, axis.text = list(col = "grey")) 704s > g2 <- s.label(dfxy1[1, ]) 704s > g3 <- s.label(dfxy1[1, ], pori.incl = FALSE) 704s > g4 <- s.label(dfxy1, labels = c("", "MM", "", NA, "ooo"), plabels.optim = TRUE) 704s > g5 <- s.label(dfxy1, labels = as.character(z < 1), psub = list(text = "Subtitle", col = "blue", position = "topleft"), plabels.col = 1:5, pgrid.text.pos = c(unit(0.95, "npc"), unit(0.94, "npc"))) 705s > 705s > dfxy2 <- cbind(dfxy1, runif(50, -5, 5)) 705s > g6 <- s.label(dfxy2, xax = 1, yax = 2:3, paxes.draw = TRUE, paxes.aspectratio = 1.5, plabels.cex = 0.8) 705s > 705s > l <- ls() 705s > x1 <- runif(length(l)) 705s > x2 <- runif(100) 705s > y1 <- runif(length(l)) 705s > y2 <- runif(100) 705s > g7 <- s.label(cbind(x2, y2), labels = as.character((x2 * x2 + y2 * y2) < 1)) 705s > g8 <- s.label(cbind(x1, y1), labels = l, add = TRUE, plabels.col = "blue") 705s > 705s 705s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 705s Copyright (C) 2025 The R Foundation for Statistical Computing 705s Platform: powerpc64le-unknown-linux-gnu 705s 705s R is free software and comes with ABSOLUTELY NO WARRANTY. 705s You are welcome to redistribute it under certain conditions. 705s Type 'license()' or 'licence()' for distribution details. 705s 705s R is a collaborative project with many contributors. 705s Type 'contributors()' for more information and 705s 'citation()' on how to cite R or R packages in publications. 705s 705s Type 'demo()' for some demos, 'help()' for on-line help, or 705s 'help.start()' for an HTML browser interface to help. 705s Type 'q()' to quit R. 705s 705s > library(adegraphics) 705s Registered S3 methods overwritten by 'adegraphics': 705s method from 705s biplot.dudi ade4 705s kplot.foucart ade4 705s kplot.mcoa ade4 705s kplot.mfa ade4 705s kplot.pta ade4 705s kplot.sepan ade4 705s kplot.statis ade4 705s scatter.coa ade4 705s scatter.dudi ade4 705s scatter.nipals ade4 705s scatter.pco ade4 705s score.acm ade4 705s score.mix ade4 705s score.pca ade4 705s screeplot.dudi ade4 706s > pdf("s.logo.pdf") 706s > 706s > ## ex1 706s > data(ggtortoises, package = "ade4") 706s > ico <- ggtortoises$ico[as.character(ggtortoises$pop$carap)] 706s > g1 <- s.logo(ggtortoises$pop, ico, pori.incl = FALSE) 706s Loading required namespace: pixmap 706s > g2 <- s.label(ggtortoises$pop, add = TRUE, plabels = list(boxes = list(alpha = 0.4, border = "transparent"))) 706s > 706s > ## ex2 706s > data(capitales, package = "ade4") 706s > index <- unlist(lapply(1:15, function(i) which(names(capitales$logo) == tolower(rownames(capitales$xy)[i]))), use.names = FALSE) 706s > g3 <- s.logo(capitales$xy, capitales$logo[index]) 706s > 706s > x <- c(0, max(capitales$area$x)) 706s > y <- c(0, max(capitales$area$y)) 706s > #g4 <- s.image(cbind(x, y), z = c(1, 2), outsideLimits = capitales$area, grid = 500, regions = list(col = "yellow", alpha = 0.9)) 706s > #s.logo(capitales$xy, capitales$logo[index], add = TRUE) 706s > 706s 706s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 706s Copyright (C) 2025 The R Foundation for Statistical Computing 706s Platform: powerpc64le-unknown-linux-gnu 706s 706s R is free software and comes with ABSOLUTELY NO WARRANTY. 706s You are welcome to redistribute it under certain conditions. 706s Type 'license()' or 'licence()' for distribution details. 706s 706s R is a collaborative project with many contributors. 706s Type 'contributors()' for more information and 706s 'citation()' on how to cite R or R packages in publications. 706s 706s Type 'demo()' for some demos, 'help()' for on-line help, or 706s 'help.start()' for an HTML browser interface to help. 706s Type 'q()' to quit R. 706s 706s > library(adegraphics) 706s Registered S3 methods overwritten by 'adegraphics': 706s method from 706s biplot.dudi ade4 706s kplot.foucart ade4 706s kplot.mcoa ade4 706s kplot.mfa ade4 706s kplot.pta ade4 706s kplot.sepan ade4 706s kplot.statis ade4 706s scatter.coa ade4 706s scatter.dudi ade4 706s scatter.nipals ade4 706s scatter.pco ade4 706s score.acm ade4 706s score.mix ade4 706s score.pca ade4 706s screeplot.dudi ade4 706s > pdf("s.match.pdf") 707s > 707s > X <- data.frame(x = runif(50, -1, 2), y = runif(50, -1, 2)) 707s > Y <- X + rnorm(100, sd = 0.3) 707s > 707s > g1 <- s.match(X, Y, ppoints.cex = 0, col = c("blue", "red")) 707s > g2 <- s.match(X, Y, arr = FALSE, ppoints.cex = 2, ppoints.col = c("blue", "green")) 707s > g3 <- s.match(X, Y, arr = FALSE) 707s > g4 <- s.match(X, Y, arrows = TRUE, plabels = list(alpha = 1, col = "black", cex = 1), plines = list(col = "red"), panel.background = list(col = "antiquewhite")) 707s > 707s 707s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 707s Copyright (C) 2025 The R Foundation for Statistical Computing 707s Platform: powerpc64le-unknown-linux-gnu 707s 707s R is free software and comes with ABSOLUTELY NO WARRANTY. 707s You are welcome to redistribute it under certain conditions. 707s Type 'license()' or 'licence()' for distribution details. 707s 707s R is a collaborative project with many contributors. 707s Type 'contributors()' for more information and 707s 'citation()' on how to cite R or R packages in publications. 707s 707s Type 'demo()' for some demos, 'help()' for on-line help, or 707s 'help.start()' for an HTML browser interface to help. 707s Type 'q()' to quit R. 707s 707s > library(adegraphics) 707s Registered S3 methods overwritten by 'adegraphics': 707s method from 707s biplot.dudi ade4 707s kplot.foucart ade4 707s kplot.mcoa ade4 707s kplot.mfa ade4 707s kplot.pta ade4 707s kplot.sepan ade4 707s kplot.statis ade4 707s scatter.coa ade4 707s scatter.dudi ade4 707s scatter.nipals ade4 707s scatter.pco ade4 707s score.acm ade4 707s score.mix ade4 707s score.pca ade4 707s screeplot.dudi ade4 708s > pdf("s.traject.pdf") 708s > 708s > rw <- function(a){ 708s + x <- 0 708s + for(i in 1:49) 708s + x <- c(x, x[length(x)] + runif(1, -1, 1)) 708s + x 708s + } 708s > 708s > x <- unlist(lapply(1:5, rw), use.names = FALSE) 708s > y <- unlist(lapply(1:5, rw), use.names = FALSE) 708s > z <- gl(5, 50) 708s > g1 <- s.traject(data.frame(x, y), z, ppoints.pch = 19:23, plines.col = rainbow(5)) 708s > 708s > x <- unlist(lapply(1:2, rw), use.names = FALSE) 708s > y <- unlist(lapply(1:2, rw), use.names = FALSE) 708s > z <- gl(2, 50) 708s > g2 <- s.traject(data.frame(x, y), z, ppoints.pch = 21:20, plines.col = 1:2) 708s > 708s 708s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 708s Copyright (C) 2025 The R Foundation for Statistical Computing 708s Platform: powerpc64le-unknown-linux-gnu 708s 708s R is free software and comes with ABSOLUTELY NO WARRANTY. 708s You are welcome to redistribute it under certain conditions. 708s Type 'license()' or 'licence()' for distribution details. 708s 708s R is a collaborative project with many contributors. 708s Type 'contributors()' for more information and 708s 'citation()' on how to cite R or R packages in publications. 708s 708s Type 'demo()' for some demos, 'help()' for on-line help, or 708s 'help.start()' for an HTML browser interface to help. 708s Type 'q()' to quit R. 708s 708s > library(adegraphics) 709s Registered S3 methods overwritten by 'adegraphics': 709s method from 709s biplot.dudi ade4 709s kplot.foucart ade4 709s kplot.mcoa ade4 709s kplot.mfa ade4 709s kplot.pta ade4 709s kplot.sepan ade4 709s kplot.statis ade4 709s scatter.coa ade4 709s scatter.dudi ade4 709s scatter.nipals ade4 709s scatter.pco ade4 709s score.acm ade4 709s score.mix ade4 709s score.pca ade4 709s screeplot.dudi ade4 709s > pdf("s.value.pdf") 709s > 709s > ## ex1 709s > xy <- cbind.data.frame(x = runif(50, -1, 1), y = runif(50, 0, 2)) 709s > z <- rnorm(50) 709s > z <- sapply(z, function(X) max(X, -3)) 709s > z <- sapply(z, function(X) min(X, 3)) 709s > val1 <- s.value(xy, z, method = "size", symbol = "square", plot = F) 709s > val2 <- s.value(xy, z, method = "color", symbol = "square", plot = F) 709s > val3 <- s.value(xy, z, method = "size", symbol = "circle", plot = F) 709s > val4 <- s.value(xy, z, method = "color", symbol = "circle", plot = F) 709s > g1 <- ADEgS(c(val1, val2, val3, val4), positions = layout2position(matrix(c(1, 2, 3, 4), 2, 2)), add = matrix(0, ncol = 4, nrow = 4)) 709s > g2 <- s.value(xy, z, method = "color", symbol = "square", breaks = c(-3, -1, -0.5, 0, 0.5, 1, 3)) 709s > g3 <- s.value(xy, z, method = "color", col = colorRampPalette(c("yellow", "blue"))(6)) 709s > g4 <- s.value(xy, z, method = "size", symbol = "circle", paxes.draw = FALSE) 709s > 709s > ## ex2 709s > xx <- runif(100) * 100 709s > yy <- 1:100 709s > zz <- 1:100 709s > breaks <- c(0, 25, 50, 75, 100) 709s > g5 <- s.value(data.frame(xx, yy), zz, breaks = breaks, method = "color", paxes.draw = TRUE, porigin.include = FALSE) 709s > g6 <- s.value(data.frame(xx, yy), cbind(zz, rev(zz)), breaks = breaks, method = "color", col = c("blue", "red", "green", "yellow"), paxes.draw = TRUE) 709s > g7 <- s.value(data.frame(xx, yy), cbind(zz, rev(zz)), nclass = c(2, 6), method = "color", col = c("blue", "red", "pink", "green", "yellow"), paxes.draw = TRUE) 709s > 709s > ## ex3 709s > data(rpjdl, package = "ade4") 710s > fau.coa <- ade4::dudi.coa(rpjdl$fau, scan = FALSE, nf = 3) 710s > val5 <- s.value(fau.coa$li, fau.coa$li[,3], plot = FALSE) 710s > val6 <- s.value(fau.coa$li, fau.coa$li[, 3], center = 0, method = "size", symbol = "circle", col = c("yellow", "red"), plot = FALSE) 710s > g8 <- ADEgS(c(val5, val6), positions = layout2position(matrix(c(1, 2), 1, 2)), add = matrix(0, ncol = 2, nrow = 2)) 710s > 710s > ## ex3 710s > data(doubs, package = "ade4") 710s > g9 <- s.value(doubs$xy, doubs$env[, 1:2]) 710s > g10 <- s.value(doubs$xy, doubs$env) 710s > 710s 710s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 710s Copyright (C) 2025 The R Foundation for Statistical Computing 710s Platform: powerpc64le-unknown-linux-gnu 710s 710s R is free software and comes with ABSOLUTELY NO WARRANTY. 710s You are welcome to redistribute it under certain conditions. 710s Type 'license()' or 'licence()' for distribution details. 710s 710s R is a collaborative project with many contributors. 710s Type 'contributors()' for more information and 710s 'citation()' on how to cite R or R packages in publications. 710s 710s Type 'demo()' for some demos, 'help()' for on-line help, or 710s 'help.start()' for an HTML browser interface to help. 710s Type 'q()' to quit R. 710s 711s > library(ade4) 711s > library(adegraphics) 711s Registered S3 methods overwritten by 'adegraphics': 711s method from 711s biplot.dudi ade4 711s kplot.foucart ade4 711s kplot.mcoa ade4 711s kplot.mfa ade4 711s kplot.pta ade4 711s kplot.sepan ade4 711s kplot.statis ade4 711s scatter.coa ade4 711s scatter.dudi ade4 711s scatter.nipals ade4 711s scatter.pco ade4 711s score.acm ade4 711s score.mix ade4 711s score.pca ade4 711s screeplot.dudi ade4 711s 711s Attaching package: 'adegraphics' 711s 711s > pdf("s1d.barchart.pdf") 711s The following objects are masked from 'package:ade4': 711s 711s kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image, 711s s.label, s.logo, s.match, s.traject, s.value, table.value, 711s triangle.class 711s 711s > 711s > ## 1 : reverse and horizontal 711s > set.seed(40) 711s > x1 <- rnorm(10) 711s > g11 <- s1d.barchart(x1) 711s > g12 <- s1d.barchart(x1, ppoly.col = "blue") 711s > 711s > g21 <- s1d.barchart(x1, p1d.hori = FALSE, p1d.rev = TRUE) 711s > g23 <- s1d.barchart(x1, p1d.hori = FALSE, p1d.rev = FALSE) 711s > g24 <- s1d.barchart(x1, p1d.hori = TRUE, p1d.rev = TRUE) 711s > g24 <- s1d.barchart(x1, p1d.hori = TRUE, p1d.rev = FALSE) 711s > 711s > ## 2 : at and sort 711s > data(rpjdl, package = "ade4") 711s > rpjdl.coa <- ade4::dudi.coa(rpjdl$fau, scannf = FALSE, nf = 4) 711s > nam <- rownames(rpjdl.coa$co) 711s > gg1 <- s1d.barchart(rpjdl.coa$co[, 1]) 711s > gg2 <- s1d.barchart(rpjdl.coa$co[, 1], labels = nam, at = 51:1) 711s > gg3 <- s1d.barchart(rpjdl.coa$co[, 1], labels = nam, sort = TRUE) 711s > gg4 <- s1d.barchart(rpjdl.coa$co[, 1], labels = nam, sort = TRUE, at = 51:1) # 'at' is ignored 711s > gg5 <- s1d.barchart(rpjdl.coa$co, labels = nam, sort = TRUE) 712s > gg6 <- s1d.barchart(rpjdl.coa$co, labels = nam, sort = FALSE) 712s > stopifnot(gg6[[1]]@data$labels == gg6[[2]]@data$labels) 712s > 712s 712s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 712s Copyright (C) 2025 The R Foundation for Statistical Computing 712s Platform: powerpc64le-unknown-linux-gnu 712s 712s R is free software and comes with ABSOLUTELY NO WARRANTY. 712s You are welcome to redistribute it under certain conditions. 712s Type 'license()' or 'licence()' for distribution details. 712s 712s R is a collaborative project with many contributors. 712s Type 'contributors()' for more information and 712s 'citation()' on how to cite R or R packages in publications. 712s 712s Type 'demo()' for some demos, 'help()' for on-line help, or 712s 'help.start()' for an HTML browser interface to help. 712s Type 'q()' to quit R. 712s 712s > library(adegraphics) 712s Registered S3 methods overwritten by 'adegraphics': 712s method from 712s biplot.dudi ade4 712s kplot.foucart ade4 712s kplot.mcoa ade4 712s kplot.mfa ade4 712s kplot.pta ade4 712s kplot.sepan ade4 712s kplot.statis ade4 712s scatter.coa ade4 712s scatter.dudi ade4 712s scatter.nipals ade4 712s scatter.pco ade4 712s score.acm ade4 712s score.mix ade4 712s score.pca ade4 712s screeplot.dudi ade4 712s > pdf("s1d.boxplot.pdf") 713s > 713s > ## ex1 713s > x <- c(rnorm(10), rnorm(10)) 713s > fact <- factor(rep(c("A", "B"), 10)) 713s > g11 <- s1d.boxplot(x, fact) 713s > g12 <- s1d.boxplot(x, fact, col = TRUE) 713s > g12 <- s1d.boxplot(x, fact, col = 2:3) 713s > g12 <- s1d.boxplot(x, fact, col = TRUE, plines.col = "black") 713s > 713s > g2 <- s1d.boxplot(x, fact, ppolygon.border = c("red", "blue"), box.rectangle = list(alpha = 1, fill = "green")) 713s > 713s > ## ex2 713s > w1 <- rnorm(100, -1) 713s > w2 <- rnorm(100) 713s > w3 <- rnorm(100, 1) 713s > f1 <- gl(3, 100) 713s > f2 <- gl(30, 10) 713s > g3 <- s1d.boxplot(c(w1, w2, w3), f1) 713s > g4 <- s1d.boxplot(c(w1, w2, w3), f2) 713s > g5 <- s1d.boxplot(c(w1, w2, w3), f2, p1d.rug.draw = FALSE) 713s > 713s > mat <- matrix(0, ncol = 1, nrow = 8) 713s > mat[c(2), ] <- 1 713s > mat[c(3:8), ] <- 2 713s > mat[1, ] <- 3 713s > g6 <- ADEgS(c(g3, g4, s1d.label(c(w1, w2, w3), p1d = list(rug = list(tck = 0.8), rev = TRUE), ppoints.cex = 0, plabels.cex = 0, plot = F, pgrid.draw = F)), 713s + layout = matrix((rev(mat)), ncol = 1)) 713s > g7 <- s1d.boxplot(c(w1, w2, w3), data.frame(f1, f2)) 713s > 713s > ## ex3 713s > data(banque, package = "ade4") 713s > banque.acm <- ade4::dudi.acm(banque, scan = FALSE, nf = 4) 713s > s1d.boxplot(banque.acm$l1[, 1], banque[, 1:7], plabels.cex = 1.8) 714s > 714s > 714s 714s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 714s Copyright (C) 2025 The R Foundation for Statistical Computing 714s Platform: powerpc64le-unknown-linux-gnu 714s 714s R is free software and comes with ABSOLUTELY NO WARRANTY. 714s You are welcome to redistribute it under certain conditions. 714s Type 'license()' or 'licence()' for distribution details. 714s 714s R is a collaborative project with many contributors. 714s Type 'contributors()' for more information and 714s 'citation()' on how to cite R or R packages in publications. 714s 714s Type 'demo()' for some demos, 'help()' for on-line help, or 714s 'help.start()' for an HTML browser interface to help. 714s Type 'q()' to quit R. 714s 714s > library(adegraphics) 714s Registered S3 methods overwritten by 'adegraphics': 714s method from 714s biplot.dudi ade4 714s kplot.foucart ade4 714s kplot.mcoa ade4 714s kplot.mfa ade4 714s kplot.pta ade4 714s kplot.sepan ade4 714s kplot.statis ade4 714s scatter.coa ade4 714s scatter.dudi ade4 714s scatter.nipals ade4 714s scatter.pco ade4 714s score.acm ade4 714s score.mix ade4 714s score.pca ade4 714s screeplot.dudi ade4 714s > pdf("s1d.class.pdf") 714s > data(meau, package = "ade4") 714s > 714s > ## ex1 714s > envpca <- ade4::dudi.pca(meau$env, scannf = FALSE) 714s > g1 <- s1d.class(envpca$li[, 1], poslab = "value", meau$design$season, col = 1:6) 715s > update(g1, p1d.horizontal = FALSE) 715s > update(g1, p1d.reverse = TRUE) 715s > g2 <- s1d.class(envpca$li[, 1], meau$design$season, col = 1:6, p1d.reverse = TRUE) 715s > g3 <- s1d.class(envpca$li[, 1], meau$design$season, col = 1:6, p1d.hori = F) 715s > 715s > ## ex2 715s > set.seed(0) 715s > score1 <- c(rnorm(3, mean = 0, sd = 0.5), rnorm(3, mean = 1, sd = 0.5), rnorm(5, mean = 2, sd = 0.5)) 715s > factor1 <- factor(rep(LETTERS[1:3], times = c(3, 3, 5))) 715s > g41 <- s1d.class(score1, factor1) 715s > g42 <- s1d.class(score1, factor1, col = 1:3) 715s > g43 <- s1d.class(score1, factor1, col = TRUE) 715s > g44 <- s1d.class(score1, factor1, col = FALSE) 715s > g45 <- s1d.class(score1, factor1, plines.col = "grey") 715s > g46 <- s1d.class(score1, factor1, plines.col = "grey", col = TRUE) 715s > 715s > ## ex3 715s > score2 <- c(rnorm(10, mean = 0, sd = 0.5), rnorm(15, mean = -1, sd = 0.2), rnorm(10, mean = 2, sd = 0.5)) 715s > factor2 <- factor(rep(c(1, 3, 2), times = c(10, 15, 10))) 715s > levels(factor2) <- c("mean0", "mean2", "mean-1") 715s > g5 <- s1d.class(score2, factor2, col = 1:3) 715s > update(g5, posla = "value") 715s > 715s > indx <- rank(rnorm(35)) 715s > factor2 <- factor2[rank(indx)] 715s > s1d.class(score2[indx], factor2[indx], col = 1:3, posla = "regular") 715s > 715s > 715s 715s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 715s Copyright (C) 2025 The R Foundation for Statistical Computing 715s Platform: powerpc64le-unknown-linux-gnu 715s 715s R is free software and comes with ABSOLUTELY NO WARRANTY. 715s You are welcome to redistribute it under certain conditions. 715s Type 'license()' or 'licence()' for distribution details. 715s 715s R is a collaborative project with many contributors. 715s Type 'contributors()' for more information and 715s 'citation()' on how to cite R or R packages in publications. 715s 715s Type 'demo()' for some demos, 'help()' for on-line help, or 715s 'help.start()' for an HTML browser interface to help. 715s Type 'q()' to quit R. 715s 715s > library(adegraphics) 716s Registered S3 methods overwritten by 'adegraphics': 716s method from 716s biplot.dudi ade4 716s kplot.foucart ade4 716s kplot.mcoa ade4 716s kplot.mfa ade4 716s kplot.pta ade4 716s kplot.sepan ade4 716s kplot.statis ade4 716s scatter.coa ade4 716s scatter.dudi ade4 716s scatter.nipals ade4 716s scatter.pco ade4 716s score.acm ade4 716s score.mix ade4 716s score.pca ade4 716s screeplot.dudi ade4 716s > pdf("s1d.density.pdf") 716s > 716s > set.seed(40) 716s > x1 <- rnorm(1000) 716s > g11 <- s1d.density(x1) 716s > g12 <- s1d.density(x1, col = FALSE, ppoly.col = "blue", p1d.rev = TRUE) 716s > g13 <- s1d.density(x1, col = TRUE, ppoly.col = "blue", p1d.hori = FALSE) 716s > g14 <- s1d.density(x1, col = TRUE, p1d.hori = FALSE, p1d.rev = TRUE) 716s > 716s > update(g11, ppolygons.border = "red") 716s > update(g11, col = FALSE, ppolygons.col = "black") 716s > update(g11, ppolygons.lwd = 3, ppolygons.lty = 3, ppolygons.alpha = 1) 716s > update(g11, ylim = c(-0.04, 0.5)) 716s > 716s > set.seed(50) 716s > x2 <- c(rnorm(1000, mean = -0.5, sd = 0.5), rnorm(1000, mean = 1)) 716s > fact <- rep(c("A", "B"), each = 1000) 716s > g21 <- s1d.density(x2, fact, col = c("red", "blue")) 716s > g22 <- s1d.density(x2, fact, col = FALSE, ppoly.col = 2:3) 716s > g23 <- s1d.density(x2, fact, col = FALSE, ppoly.col = 2:3, p1d.rev = TRUE) 716s > g24 <- s1d.density(x2, fact, col = FALSE, ppoly.col = 2:3, p1d.horizontal = FALSE) 716s > g25 <- s1d.density(x2, fact, col = FALSE, ppoly.col = 2:3, p1d.horizontal = FALSE, p1d.rev = TRUE) 716s > 716s > set.seed(60) 716s > x3 <- rnorm(1000) 716s > g31 <- s1d.density(x3) 716s > g32 <- s1d.density(x3, p1d.rug.draw = FALSE) 716s > g33 <- s1d.density(x3, p1d.rug.draw = FALSE, p1d.rev = TRUE) 716s > g34 <- s1d.density(x3, p1d.rug.draw = FALSE, p1d.hori = FALSE) 716s > g35 <- s1d.density(x3, p1d.rug.draw = FALSE, p1d.hori = FALSE, p1d.rev = TRUE) 717s > 717s > update(g31, p1d.rev = TRUE) 717s > update(g32, p1d.rev = TRUE) 717s > update(g33, p1d.rev = FALSE) 717s > update(g34, p1d.rev = TRUE) 717s > update(g35, p1d.rev = FALSE) 717s > 717s > 717s 717s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 717s Copyright (C) 2025 The R Foundation for Statistical Computing 717s Platform: powerpc64le-unknown-linux-gnu 717s 717s R is free software and comes with ABSOLUTELY NO WARRANTY. 717s You are welcome to redistribute it under certain conditions. 717s Type 'license()' or 'licence()' for distribution details. 717s 717s R is a collaborative project with many contributors. 717s Type 'contributors()' for more information and 717s 'citation()' on how to cite R or R packages in publications. 717s 717s Type 'demo()' for some demos, 'help()' for on-line help, or 717s 'help.start()' for an HTML browser interface to help. 717s Type 'q()' to quit R. 717s 717s > library(adegraphics) 717s Registered S3 methods overwritten by 'adegraphics': 717s method from 717s biplot.dudi ade4 717s kplot.foucart ade4 717s kplot.mcoa ade4 717s kplot.mfa ade4 717s kplot.pta ade4 717s kplot.sepan ade4 717s kplot.statis ade4 717s scatter.coa ade4 717s scatter.dudi ade4 717s scatter.nipals ade4 717s scatter.pco ade4 717s score.acm ade4 717s score.mix ade4 717s score.pca ade4 717s screeplot.dudi ade4 717s > pdf("s1d.distri.pdf") 717s > 717s > ## ex1 717s > score <- rnorm(10) 717s > df <- data.frame(matrix(rep(c(1, 2), 10), ncol = 2)) 717s > g1 <- s1d.distri(score, df) 717s > 717s > ## ex2 717s > set.seed(1) 717s > w <- seq(-1, 1, le = 200) 717s > distri <- data.frame(lapply(1:50, function(x) sample(200:1) * ((w >= (- x / 50)) & (w <= x / 50)))) 717s > names(distri) <- paste("w", 1:50, sep = "") 717s > g2 <- s1d.distri(w, distri) 718s > g3 <- s1d.distri(w, distri, yrank = TRUE, sdS = 1.5) 718s > 718s > g4 <- s1d.distri(w, distri, p1d.rug.draw = FALSE) 718s > g5 <- s1d.distri(w, distri, p1d.reverse = TRUE) 718s > g6 <- s1d.distri(w, distri, p1d.hori = FALSE) 718s > g7 <- s1d.distri(w, distri, p1d.hori = FALSE, p1d.reverse = TRUE) 718s > 718s > update(g2, p1d.rug.draw = FALSE) 718s > update(g5, p1d.rug.draw = FALSE) 718s > 718s 718s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 718s Copyright (C) 2025 The R Foundation for Statistical Computing 718s Platform: powerpc64le-unknown-linux-gnu 718s 718s R is free software and comes with ABSOLUTELY NO WARRANTY. 718s You are welcome to redistribute it under certain conditions. 718s Type 'license()' or 'licence()' for distribution details. 718s 718s R is a collaborative project with many contributors. 718s Type 'contributors()' for more information and 718s 'citation()' on how to cite R or R packages in publications. 718s 718s Type 'demo()' for some demos, 'help()' for on-line help, or 718s 'help.start()' for an HTML browser interface to help. 718s Type 'q()' to quit R. 718s 718s > library(adegraphics) 719s Registered S3 methods overwritten by 'adegraphics': 719s method from 719s biplot.dudi ade4 719s kplot.foucart ade4 719s kplot.mcoa ade4 719s kplot.mfa ade4 719s kplot.pta ade4 719s kplot.sepan ade4 719s kplot.statis ade4 719s scatter.coa ade4 719s scatter.dudi ade4 719s scatter.nipals ade4 719s scatter.pco ade4 719s score.acm ade4 719s score.mix ade4 719s score.pca ade4 719s screeplot.dudi ade4 719s > pdf("s1d.gauss.pdf") 719s > 719s > data(meau, package= "ade4") 719s > envpca <- ade4::dudi.pca(meau$env, scannf = FALSE) 719s > dffac <- cbind.data.frame(meau$design$season, meau$design$site) 719s > g11 <- s1d.gauss(envpca$li[, 1], dffac[, 1]) 719s > g12 <- s1d.gauss(envpca$li[, 1], dffac[, 1], p1d.rev = TRUE) 719s > g13 <- s1d.gauss(envpca$li[, 1], dffac[, 1], p1d.hori = FALSE) 719s > g14 <- s1d.gauss(envpca$li[, 1], dffac[, 1], p1d.hori = FALSE, p1d.rev = TRUE) 719s > 719s > g2 <- s1d.gauss(envpca$li[, 1], dffac[, 1], ppoly.col = 1:4, fill = TRUE, plines.col = 1:4, col = FALSE) 719s > 719s > g31 <- s1d.gauss(envpca$li[, 1], dffac[, 2], ppoly.col = 1:4, paxes.draw = TRUE, ylim = c(0, 2), fill = TRUE, p1d.hori = FALSE) 719s > g32 <- s1d.gauss(envpca$li[, 1], dffac[, 2], ppoly.col = 1:4, paxes.draw = TRUE, fill = TRUE, p1d.hori = FALSE) 719s > 719s > g4 <- s1d.gauss(envpca$li[, 1], fac = dffac, fill = TRUE, col = 1:5) 719s > g5 <- s1d.gauss(envpca$li[, 1], fac = dffac, fill = TRUE, col = FALSE, ppoly.col = 1:6) 720s > g6 <- s1d.gauss(envpca$li[, 1], fac = dffac[, 1], fill = TRUE, col = 1:6, ppoly.col = 1:6) 720s > 720s > g7 <- s1d.gauss(envpca$li[, 1], fac = dffac, fill = TRUE, col = 1:6, ppoly.col = 1:6, steps = 10) 720s > g8 <- s1d.gauss(envpca$li[, 1], dffac[, 2]) 720s > 720s > update(g11, p1d.reverse = TRUE) 720s > update(g12, p1d.reverse = FALSE) 720s > update(g13, p1d.reverse = TRUE) 720s > update(g14, p1d.reverse = FALSE) 720s > 720s 720s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 720s Copyright (C) 2025 The R Foundation for Statistical Computing 720s Platform: powerpc64le-unknown-linux-gnu 720s 720s R is free software and comes with ABSOLUTELY NO WARRANTY. 720s You are welcome to redistribute it under certain conditions. 720s Type 'license()' or 'licence()' for distribution details. 720s 720s R is a collaborative project with many contributors. 720s Type 'contributors()' for more information and 720s 'citation()' on how to cite R or R packages in publications. 720s 720s Type 'demo()' for some demos, 'help()' for on-line help, or 720s 'help.start()' for an HTML browser interface to help. 720s Type 'q()' to quit R. 720s 720s > library(ade4) 720s > library(adegraphics) 720s Registered S3 methods overwritten by 'adegraphics': 720s method from 720s biplot.dudi ade4 720s kplot.foucart ade4 720s kplot.mcoa ade4 720s kplot.mfa ade4 720s kplot.pta ade4 720s kplot.sepan ade4 720s kplot.statis ade4 720s scatter.coa ade4 720s scatter.dudi ade4 720s scatter.nipals ade4 720s scatter.pco ade4 720s score.acm ade4 720s score.mix ade4 720s score.pca ade4 720s screeplot.dudi ade4 721s > pdf("s1d.hist.pdf") 721s 721s Attaching package: 'adegraphics' 721s 721s The following objects are masked from 'package:ade4': 721s 721s kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image, 721s s.label, s.logo, s.match, s.traject, s.value, table.value, 721s triangle.class 721s 721s > 721s > set.seed(40) 721s > x1 <- rnorm(1000) 721s > g11 <- s1d.hist(x1) 721s > g12 <- s1d.hist(x1, col = 1:10) 721s > g13 <- s1d.hist(x1, col = FALSE, ppoly.col = 1:10) 721s > g14 <- s1d.hist(x1, col = TRUE, ppoly.col = "blue") 721s > 721s > set.seed(50) 721s > x1 <- rnorm(1000) 721s > g21 <- s1d.hist(x1) # p1d.hori = TRUE and p1d.reverse = FALSE by default 721s > # g22 <- s1d.hist(x1, p1d.hori = TRUE, p1d.rev = TRUE) 721s > g23 <- s1d.hist(x1, p1d.hori = FALSE, p1d.rev = FALSE) 721s > # g24 <- s1d.hist(x1, p1d.hori = FALSE, p1d.rev = TRUE) 721s > 721s > 721s > # randtest.pcaiv 721s > data(rpjdl, package = "ade4") 721s > millog <- log(rpjdl$mil + 1) 721s > coa1 <- dudi.coa(rpjdl$fau, scann = FALSE) 721s > caiv1 <- pcaiv(coa1, millog, scan = FALSE) 721s > set.seed(50) 721s > rd11 <- randtest(caiv1) 721s > plot(rd11) 721s > set.seed(50) 721s > rd12 <- randtest(caiv1, output = "full") 721s > plot(rd12, nclass = 15) # must be the same output as rd11 721s > set.seed(50) 721s > rd13 <- randtest(caiv1, output = "full") 722s > plot(rd13, nclass = 8) 722s > plot(rd13, nclass = 8, plines.col = "red") 722s > plot(rd13, nclass = 8, obs.plines.col = "red") 722s > plot(rd13, nclass = 8, sim.plines.col = "red") 722s > 722s > # randtest.dpcoa 722s > data(humDNAm, package = "ade4") 722s > dpcoahum <- dpcoa(data.frame(t(humDNAm$samples)), sqrt(humDNAm$distances), scan = FALSE, nf = 2) 722s > set.seed(50) 722s > rd21 <- randtest(dpcoahum) 722s > plot(rd21) 722s > rd22 <- randtest(dpcoahum, output = "full") 723s > plot(rd22) 723s > 723s > # randtest.amova (plot.krandtest) 723s > amovahum <- amova(humDNAm$samples, sqrt(humDNAm$distances), humDNAm$structures) 723s > set.seed(50) 723s > rd31 <- randtest(amovahum, 49) 723s > plot(rd31) 723s > plot(rd31, plines.col = "red") 723s > plot(rd31, g1.plines.col = "red") 723s > set.seed(50) 723s > rd32 <- randtest(amovahum, 49, output = "full") 723s > plot(rd32) 724s > plot(rd32, plines.col = "red") 724s > plot(rd32, g1.plines.col = "red") 724s > plot(rd32, nclass = 30, g2.pback.col = "lightblue") 724s > 724s > # randtest.coinertia 724s > data(doubs, package = "ade4") 724s > dudi1 <- dudi.pca(doubs$env, scale = TRUE, scan = FALSE, nf = 3) 724s > dudi2 <- dudi.pca(doubs$fish, scale = FALSE, scan = FALSE, nf = 2) 724s > coin1 <- coinertia(dudi1,dudi2, scan = FALSE, nf = 2) 724s > set.seed(50) 724s > rd4 <- randtest(coin1) 724s > plot(rd4) 725s > 725s > # randtest.pcaivortho 725s > data(rpjdl, package = "ade4") 725s > millog <- log(rpjdl$mil + 1) 725s > coa1 <- dudi.coa(rpjdl$fau, scann = FALSE) 725s > caiv1 <- pcaiv(coa1, millog, scan = FALSE) 725s > set.seed(50) 725s > rd5 <- randtest(caiv1) 725s > plot(rd5) 725s > 725s > # randtest.rlq (plot.krandtest) 725s > data(aviurba, package = "ade4") 725s > coa1 <- dudi.coa(aviurba$fau, scannf = FALSE, nf = 2) 725s > dudimil <- dudi.hillsmith(aviurba$mil, scannf = FALSE, nf = 2, row.w = coa1$lw) 725s > duditrait <- dudi.hillsmith(aviurba$traits, scannf = FALSE, nf = 2, row.w = coa1$cw) 725s > rlq1 <- rlq(dudimil, coa1, duditrait, scannf = FALSE, nf = 2) 725s > set.seed(50) 725s > rd6 <- randtest(rlq1) 725s > plot(rd6) 726s > 726s > # randtest.between 726s > data(meaudret, package = "ade4") 726s > pca1 <- dudi.pca(meaudret$env, scan = FALSE, nf = 3) 726s > set.seed(50) 726s > rd7 <- randtest(bca(pca1, meaudret$design$season, scan = FALSE), 99) 726s > plot(rd7, main = "Monte-Carlo test") 726s > 726s > # randtest.discrimin 726s > set.seed(50) 726s > rd8 <- randtest(discrimin(pca1, meaudret$design$season, scan = FALSE), 99) 726s > plot(rd8, main = "Monte-Carlo test") 726s > 726s 726s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 726s Copyright (C) 2025 The R Foundation for Statistical Computing 726s Platform: powerpc64le-unknown-linux-gnu 726s 726s R is free software and comes with ABSOLUTELY NO WARRANTY. 726s You are welcome to redistribute it under certain conditions. 726s Type 'license()' or 'licence()' for distribution details. 726s 726s R is a collaborative project with many contributors. 726s Type 'contributors()' for more information and 726s 'citation()' on how to cite R or R packages in publications. 726s 726s Type 'demo()' for some demos, 'help()' for on-line help, or 726s 'help.start()' for an HTML browser interface to help. 726s Type 'q()' to quit R. 726s 726s > library(adegraphics) 726s Registered S3 methods overwritten by 'adegraphics': 726s method from 726s biplot.dudi ade4 726s kplot.foucart ade4 726s kplot.mcoa ade4 726s kplot.mfa ade4 726s kplot.pta ade4 726s kplot.sepan ade4 726s kplot.statis ade4 726s scatter.coa ade4 726s scatter.dudi ade4 726s scatter.nipals ade4 726s scatter.pco ade4 726s score.acm ade4 726s score.mix ade4 726s score.pca ade4 726s screeplot.dudi ade4 726s > pdf("s1d.label.pdf") 726s > data(meau, package= "ade4") 726s > 726s > envpca <- ade4::dudi.pca(meau$env, scannf = FALSE) 726s > 726s > g1 <- s1d.label(envpca$l1[, 1], row.names(envpca$l1)) 727s > g2 <- s1d.label(envpca$l1[, 1], row.names(envpca$l1), p1d.hori = F) 727s > g3 <- s1d.label(envpca$l1[, 1], row.names(envpca$l1), plabels.boxes.draw = FALSE, plab.srt = 45, plabel.boxes = list(draw = FALSE)) 727s > g4 <- s1d.label(envpca$co[, 1], row.names(envpca$co), p1d.reverse = TRUE, poslabel = "value") 727s > g5 <- s1d.label(envpca$l1[, 1], row.names(envpca$l1), at = 0, plabel.cex = 0) 727s > 727s 727s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 727s Copyright (C) 2025 The R Foundation for Statistical Computing 727s Platform: powerpc64le-unknown-linux-gnu 727s 727s R is free software and comes with ABSOLUTELY NO WARRANTY. 727s You are welcome to redistribute it under certain conditions. 727s Type 'license()' or 'licence()' for distribution details. 727s 727s R is a collaborative project with many contributors. 727s Type 'contributors()' for more information and 727s 'citation()' on how to cite R or R packages in publications. 727s 727s Type 'demo()' for some demos, 'help()' for on-line help, or 727s 'help.start()' for an HTML browser interface to help. 727s Type 'q()' to quit R. 727s 727s > library(adegraphics) 727s Registered S3 methods overwritten by 'adegraphics': 727s method from 727s biplot.dudi ade4 727s kplot.foucart ade4 727s kplot.mcoa ade4 727s kplot.mfa ade4 727s kplot.pta ade4 727s kplot.sepan ade4 727s kplot.statis ade4 727s scatter.coa ade4 727s scatter.dudi ade4 727s scatter.nipals ade4 727s scatter.pco ade4 727s score.acm ade4 727s score.mix ade4 727s score.pca ade4 727s screeplot.dudi ade4 727s > pdf("s1d.match.pdf") 727s > 727s > g1 <- s1d.match(-5:5, 2 * (-5:5)) 728s > g2 <- s1d.match(rnorm(10), runif(10), p1d.hor = FALSE) 728s > g3 <- s1d.match(1:5, 7:11, p1d.hor = F, p1d.rev = T) 728s > 728s 728s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 728s Copyright (C) 2025 The R Foundation for Statistical Computing 728s Platform: powerpc64le-unknown-linux-gnu 728s 728s R is free software and comes with ABSOLUTELY NO WARRANTY. 728s You are welcome to redistribute it under certain conditions. 728s Type 'license()' or 'licence()' for distribution details. 728s 728s R is a collaborative project with many contributors. 728s Type 'contributors()' for more information and 728s 'citation()' on how to cite R or R packages in publications. 728s 728s Type 'demo()' for some demos, 'help()' for on-line help, or 728s 'help.start()' for an HTML browser interface to help. 728s Type 'q()' to quit R. 728s 728s > library(adegraphics) 728s Registered S3 methods overwritten by 'adegraphics': 728s method from 728s biplot.dudi ade4 728s kplot.foucart ade4 728s kplot.mcoa ade4 728s kplot.mfa ade4 728s kplot.pta ade4 728s kplot.sepan ade4 728s kplot.statis ade4 728s scatter.coa ade4 728s scatter.dudi ade4 728s scatter.nipals ade4 728s scatter.pco ade4 728s score.acm ade4 728s score.mix ade4 728s score.pca ade4 728s screeplot.dudi ade4 728s > pdf("table.image.pdf") 728s > 728s > ## ex1 728s > x <- 1:4 728s > y <- 1:4 728s > df <- data.frame(as.matrix(cbind(x, y))) 728s > g1 <- table.image(df, col = 2:4) 728s > update(g1, plegend.drawColorKey = TRUE) 729s > 729s > ## ex2 729s > df <- matrix(0, 10, 10) 729s > df[1:3, 1:3] <- 5 729s > g2 <- table.image(df) 729s > g3 <- table.image(df, breaks = c(5, 2, 0)) 729s > 729s > ## ex3 729s > data(rpjdl, package = "ade4") 729s > X <- data.frame(t(rpjdl$fau)) 729s > Y <- data.frame(t(rpjdl$mil)) 729s > coa1 <- ade4::dudi.coa(X, scan = FALSE) 729s > x <- rank(coa1$co[, 1]) 729s > y <- rank(coa1$li[, 1]) 729s > g4 <- table.image(Y, coordsx = x, coordsy = 1:8, axis.text = list(alpha = 0), pgrid.col = "black", pgrid.lwd = 0.8, col = c("white", "black"), plegend.drawKey = FALSE) 729s > g5 <- table.image(X, coordsx = x, coordsy = y, ptable = list(x = list(tck = 0), y = list(tck = 4)), pleg.drawKey = FALSE, labelsy = paste(" ", row.names(X), sep = "")) 729s > g6 <- ADEgS(list(g4, g5), positions = rbind(c(0, 0, 1, 0.3), c(0, 0.4, 1, 1))) 729s > 729s 729s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 729s Copyright (C) 2025 The R Foundation for Statistical Computing 729s Platform: powerpc64le-unknown-linux-gnu 729s 729s R is free software and comes with ABSOLUTELY NO WARRANTY. 729s You are welcome to redistribute it under certain conditions. 729s Type 'license()' or 'licence()' for distribution details. 729s 729s R is a collaborative project with many contributors. 729s Type 'contributors()' for more information and 729s 'citation()' on how to cite R or R packages in publications. 729s 729s Type 'demo()' for some demos, 'help()' for on-line help, or 729s 'help.start()' for an HTML browser interface to help. 729s Type 'q()' to quit R. 729s 729s > library(adegraphics) 729s Registered S3 methods overwritten by 'adegraphics': 729s method from 729s biplot.dudi ade4 729s kplot.foucart ade4 729s kplot.mcoa ade4 729s kplot.mfa ade4 729s kplot.pta ade4 729s kplot.sepan ade4 729s kplot.statis ade4 729s scatter.coa ade4 729s scatter.dudi ade4 729s scatter.nipals ade4 729s scatter.pco ade4 729s score.acm ade4 729s score.mix ade4 729s score.pca ade4 729s screeplot.dudi ade4 730s > pdf("table.value.pdf") 730s > 730s > 730s > ## ex1 730s > data(olympic, package = "ade4") 730s > tab1 <- data.frame(scale(olympic$tab)) 730s > pca <- ade4::dudi.pca(tab1, scann = FALSE) 730s > g1 <- table.value(tab1, axis.line = list(col = "blue"), axis.text = list(col = "grey")) 730s > g2 <- table.value(tab1, coordsx = c(1:5, 10:6)) 730s > g3 <- table.value(tab1, coordsx = c(1:5, 10:8)) 730s > g4 <- table.value(tab1, coordsy = rank(pca$li[, 1]), coordsx = rank(pca$co[, 1]), method = "color") 730s > g5 <- table.value(tab1, coordsy = pca$li[, 1], coordsx = pca$co[, 1], ptable = list(x = list(srt = 90))) 730s > 730s > ## ex2 730s > data(eurodist) 730s > g61 <- table.value(eurodist) 730s > g62 <- table.value(eurodist, store = TRUE, symbol = "circle") 730s > g63 <- table.value(eurodist, store = FALSE, psub.text = "eurodist", psub.position = c(0, -0.04)) 730s > g64 <- table.value(eurodist, ptable.margin = list(b = 17, t = 17, l = 17, r = 17)) 730s > g65 <- table.value(eurodist, ptable.x = list(pos = "bottom"), 730s + ptable.margin = list(b = 17, t = 17, l = 17, r = 17)) 730s > 730s > ## ex3 730s > data("doubs", package = "ade4") 730s > tab2 <- as.table(as.matrix(doubs$fish)) 730s > g8 <- table.value(tab2) 730s > 730s > ## ex4 730s > data(chats, package = "ade4") 730s > tab3 <- as.table(as.matrix(data.frame(t(chats)))) 730s > coa1 <- ade4::dudi.coa(data.frame(t(chats)), scann = FALSE) 730s > adegparold <- adegpar() 730s > adegpar(ptable = list(x = list(pos = "bottom", srt = 0), y = list(pos = "left")), plegend.drawKey = FALSE) 730s > g9 <- table.value(tab3, meanX = TRUE, ablineX = TRUE) 730s > g10 <- table.value(tab3, meanY = TRUE, ablineY = TRUE) 730s > g11 <- table.value(tab3, coordsx = coa1$c1[, 1], coordsy = coa1$l1[, 1], meanX = TRUE, ablineX = TRUE) 730s > g12 <- table.value(tab3, coordsx = coa1$c1[, 1], coordsy = coa1$l1[, 1], meanY = TRUE, ablineY = TRUE) 730s > g13 <- ADEgS(list(g9, g10, g11, g12), pos = rbind(c(0, 0.5, 0.5, 1), c(0.5, 0.5, 1, 1), c(0, 0, 0.5, 0.5), c(0.5, 0, 1, 0.5))) 731s > adegpar(adegparold) 731s > 731s > ## ex5 731s > data(rpjdl, package = "ade4") 731s > tab4 <- data.frame(t(rpjdl$fau)) 731s > coa2 <- ade4::dudi.coa(tab4, scann = FALSE) 731s > g14 <- table.value(tab4, coordsx = coa2$c1[, 1], coordsy = rank(coa2$l1[, 1]), axis.text = list(cex = 0), labelsy = rpjdl$lalab, plot = F) 731s > 731s > ## ex6 731s > tab5 <- as.table(matrix(rep(0, 100), 10)) 731s > tab5[1:5, 1:5] <- 10 731s > ade4::table.cont(tab5, abmean.x = T, y = 10:1) 731s > g15 <- table.value(tab5, coordsy = 10:1, meanX = T) 731s > g16 <- table.value(tab5, coordsy = 10:1, meanX = T, meanY = TRUE, ablineX = TRUE, ablineY = TRUE) 731s > 731s > ## ex7 731s > tab6 <- matrix(rep(0, 100), 10) 731s > tab6[1:5, 1:5] <- 20 731s > colnames(tab6) <- LETTERS[1:10] 731s > rownames(tab6) <- LETTERS[1:10] 731s > ade4::table.value(tab6, x = 1:10, y = 10:1) 731s > g17 <- table.value(tab6, coordsx = 1:10, coordsy = 10:1) 731s > g18 <- table.value(tab6, coordsx = 1:10, coordsy = c(1, 2, 5, 6, 8, 9, 10, 3, 4, 7)) 731s > 731s > 731s > ## ex8 731s > d <- as.dist(matrix(rep(1:5, 5), 5), upper = TRUE) 731s > attr(d, "Labels") <- c ("A", "B", "C", "D", "E") 731s > g4 <- table.value(d) 731s > 731s > ## ex9 731s > data(irishdata, package = "ade4") 731s > d.geo <- dist(irishdata$xy.utm) 731s > g5 <- table.value(d.geo) 731s > 731s 731s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 731s Copyright (C) 2025 The R Foundation for Statistical Computing 731s Platform: powerpc64le-unknown-linux-gnu 731s 731s R is free software and comes with ABSOLUTELY NO WARRANTY. 731s You are welcome to redistribute it under certain conditions. 731s Type 'license()' or 'licence()' for distribution details. 731s 731s R is a collaborative project with many contributors. 731s Type 'contributors()' for more information and 731s 'citation()' on how to cite R or R packages in publications. 731s 731s Type 'demo()' for some demos, 'help()' for on-line help, or 731s 'help.start()' for an HTML browser interface to help. 731s Type 'q()' to quit R. 731s 731s > library(adegraphics) 731s Registered S3 methods overwritten by 'adegraphics': 731s method from 731s biplot.dudi ade4 731s kplot.foucart ade4 731s kplot.mcoa ade4 731s kplot.mfa ade4 731s kplot.pta ade4 731s kplot.sepan ade4 731s kplot.statis ade4 731s scatter.coa ade4 731s scatter.dudi ade4 731s scatter.nipals ade4 731s scatter.pco ade4 731s score.acm ade4 731s score.mix ade4 731s score.pca ade4 731s screeplot.dudi ade4 732s > pdf("triangle.pdf") 732s > 732s > ## ex1 732s > data(euro123, package = "ade4") 732s > 732s > dfxyz1 <- rbind.data.frame(euro123$in78, euro123$in86, euro123$in97) 732s > row.names(dfxyz1) <- paste(row.names(euro123$in78), rep(c(1, 2, 3), rep(12, 3)), sep = "") 732s > g1 <- triangle.label(dfxyz1, label = row.names(dfxyz1)) 732s > g2 <- triangle.label(euro123$in86, label = row.names(euro123$in78), plab.cex = 0.8) 732s > g3 <- triangle.match(euro123$in78, euro123$in86) 732s > g4 <- triangle.label(rbind.data.frame(euro123$in78, euro123$in86), plab.cex = 1, addaxes = TRUE, psub = list(text = "Principal axis", cex = 2, pos = "topright")) 732s > g5 <- triangle.label(euro123[[1]], min3 = c(0, 0.2, 0.3), max3 = c(0.5, 0.7, 0.8), plabels.cex = 1, label = row.names(euro123[[1]]), addax = TRUE) 732s > g6 <- triangle.label(euro123[[2]], min3 = c(0, 0.2, 0.3), max3 = c(0.5, 0.7, 0.8), label = row.names(euro123[[1]]), addax = TRUE) 732s > g7 <- triangle.label(euro123[[3]], min3 = c(0, 0.2, 0.3), max3 = c(0.5, 0.7, 0.8), label = row.names(euro123[[1]]), addax = TRUE) 732s > g8 <- triangle.label(rbind.data.frame(euro123[[1]], euro123[[2]], euro123[[3]])) 732s > 732s > ## ex2 732s > dfxyz2 <- cbind.data.frame(a = runif(100), b = runif(100), c = runif(100, 4, 5)) 732s > g9 <- triangle.label(dfxyz2) 733s > 733s > ## ex3 733s > g10 <- triangle.label(dfxyz1) 733s > g11 <- triangle.class(dfxyz1, as.factor(rep("G", 36)), star = 0.5, ellips = 1) 733s > g12 <- triangle.class(dfxyz1, euro123$plan$an) 733s > g13 <- triangle.class(dfxyz1, euro123$plan$pays) 733s > g14 <- triangle.class(dfxyz1, euro123$plan$an, elli = 1, pell.axe.draw = TRUE) 733s > g15 <- triangle.class(dfxyz1, euro123$plan$an, elli = 0, sta = 0, col = c("red", "green", "blue"), pell.axe.draw = TRUE, plab.cex = 2, ppoi.cex = 2, pell.axe.draw = TRUE) 733s > g16 <- triangle.class(dfxyz1, euro123$plan$an, ell = 2, sta = 0.5, pell.axe.draw = TRUE, plab.cex = 1.5) 733s > g17 <- triangle.class(dfxyz1, euro123$plan$an, ell = 0, sta = 1, adjust = FALSE) 733s > g18 <- triangle.class(dfxyz1, euro123$plan$an, ell = 0, sta = 1, chull =c(0.2, 0.25, 0.5, 0.75, 1), adjust = TRUE, showposi = TRUE, col = 10:13, pgrid.draw = FALSE) 733s > 734s autopkgtest [22:52:59]: test run-unit-test: -----------------------] 734s run-unit-test PASS 734s autopkgtest [22:52:59]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 734s autopkgtest [22:52:59]: test pkg-r-autopkgtest: preparing testbed 735s Reading package lists... 735s Building dependency tree... 735s Reading state information... 735s Solving dependencies... 735s The following NEW packages will be installed: 735s build-essential cpp cpp-15 cpp-15-powerpc64le-linux-gnu 735s cpp-powerpc64le-linux-gnu dctrl-tools g++ g++-15 735s g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-15 735s gcc-15-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-15 735s gfortran-15-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 735s icu-devtools libasan8 libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 735s libcrypt-dev libdeflate-dev libgcc-15-dev libgfortran-15-dev libicu-dev 735s libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev 735s liblsan0 liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 735s libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libquadmath0 735s libreadline-dev libstdc++-15-dev libtirpc-dev libtsan2 libubsan1 libzstd-dev 735s linux-libc-dev pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto 735s zlib1g-dev 735s 0 upgraded, 60 newly installed, 0 to remove and 0 not upgraded. 735s Need to get 104 MB of archives. 735s After this operation, 388 MB of additional disk space will be used. 735s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc-dev-bin ppc64el 2.42-2ubuntu4 [23.9 kB] 735s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el linux-libc-dev ppc64el 6.19.0-3.3 [1832 kB] 738s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcrypt-dev ppc64el 1:4.5.1-1 [162 kB] 738s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el rpcsvc-proto ppc64el 1.4.3-1build1 [84.2 kB] 738s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc6-dev ppc64el 2.42-2ubuntu4 [2080 kB] 742s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libisl23 ppc64el 0.27-1build1 [893 kB] 743s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmpc3 ppc64el 1.3.1-2 [62.5 kB] 743s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [11.4 MB] 761s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15 ppc64el 15.2.0-12ubuntu1 [1038 B] 761s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [5746 B] 761s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp ppc64el 4:15.2.0-4ubuntu1 [22.4 kB] 761s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcc1-0 ppc64el 15.2.0-12ubuntu1 [49.0 kB] 761s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el libitm1 ppc64el 15.2.0-12ubuntu1 [32.2 kB] 761s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el libasan8 ppc64el 15.2.0-12ubuntu1 [3006 kB] 766s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblsan0 ppc64el 15.2.0-12ubuntu1 [1374 kB] 768s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtsan2 ppc64el 15.2.0-12ubuntu1 [2729 kB] 772s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libubsan1 ppc64el 15.2.0-12ubuntu1 [1231 kB] 774s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el libquadmath0 ppc64el 15.2.0-12ubuntu1 [160 kB] 774s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgcc-15-dev ppc64el 15.2.0-12ubuntu1 [1670 kB] 776s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [22.4 MB] 812s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15 ppc64el 15.2.0-12ubuntu1 [530 kB] 812s Get:22 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1220 B] 812s Get:23 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http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-dev ppc64el 10.46-1 [937 kB] 894s Get:50 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpkgconf3 ppc64el 1.8.1-4build1 [37.9 kB] 894s Get:51 http://ftpmaster.internal/ubuntu resolute/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [903 kB] 897s Get:52 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpng-dev ppc64el 1.6.54-1 [326 kB] 897s Get:53 http://ftpmaster.internal/ubuntu resolute/main ppc64el libreadline-dev ppc64el 8.3-3 [252 kB] 897s Get:54 http://ftpmaster.internal/ubuntu resolute/main ppc64el libzstd-dev ppc64el 1.5.7+dfsg-3 [528 kB] 899s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblzma-dev ppc64el 5.8.2-2 [210 kB] 899s Get:56 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf-bin ppc64el 1.8.1-4build1 [22.7 kB] 899s Get:57 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf ppc64el 1.8.1-4build1 [16.8 kB] 899s Get:58 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtirpc-dev ppc64el 1.3.6+ds-1 [223 kB] 899s Get:59 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-dev all 4.5.2-1ubuntu2 [1880 B] 899s Get:60 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pkg-r-autopkgtest all 20250812 [6158 B] 899s Fetched 104 MB in 2min 44s (634 kB/s) 899s Selecting previously unselected package libc-dev-bin. 899s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 147767 files and directories currently installed.) 899s Preparing to unpack .../00-libc-dev-bin_2.42-2ubuntu4_ppc64el.deb ... 899s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 899s Selecting previously unselected package linux-libc-dev:ppc64el. 899s Preparing to unpack .../01-linux-libc-dev_6.19.0-3.3_ppc64el.deb ... 899s Unpacking linux-libc-dev:ppc64el (6.19.0-3.3) ... 899s Selecting previously unselected package libcrypt-dev:ppc64el. 899s Preparing to unpack .../02-libcrypt-dev_1%3a4.5.1-1_ppc64el.deb ... 899s Unpacking libcrypt-dev:ppc64el (1:4.5.1-1) ... 899s Selecting previously unselected package rpcsvc-proto. 899s Preparing to unpack .../03-rpcsvc-proto_1.4.3-1build1_ppc64el.deb ... 899s Unpacking rpcsvc-proto (1.4.3-1build1) ... 899s Selecting previously unselected package libc6-dev:ppc64el. 899s Preparing to unpack .../04-libc6-dev_2.42-2ubuntu4_ppc64el.deb ... 899s Unpacking libc6-dev:ppc64el (2.42-2ubuntu4) ... 899s Selecting previously unselected package libisl23:ppc64el. 899s Preparing to unpack .../05-libisl23_0.27-1build1_ppc64el.deb ... 899s Unpacking libisl23:ppc64el (0.27-1build1) ... 899s Selecting previously unselected package libmpc3:ppc64el. 899s Preparing to unpack .../06-libmpc3_1.3.1-2_ppc64el.deb ... 899s Unpacking libmpc3:ppc64el (1.3.1-2) ... 899s Selecting previously unselected package cpp-15-powerpc64le-linux-gnu. 899s Preparing to unpack .../07-cpp-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 899s Unpacking cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 899s Selecting previously unselected package cpp-15. 899s Preparing to unpack .../08-cpp-15_15.2.0-12ubuntu1_ppc64el.deb ... 899s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 900s Preparing to unpack .../09-cpp-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 900s Unpacking cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 900s Selecting previously unselected package cpp. 900s Preparing to unpack .../10-cpp_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 900s Unpacking cpp (4:15.2.0-4ubuntu1) ... 900s Selecting previously unselected package libcc1-0:ppc64el. 900s Preparing to unpack .../11-libcc1-0_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package libitm1:ppc64el. 900s Preparing to unpack .../12-libitm1_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libitm1:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package libasan8:ppc64el. 900s Preparing to unpack .../13-libasan8_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libasan8:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package liblsan0:ppc64el. 900s Preparing to unpack .../14-liblsan0_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking liblsan0:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package libtsan2:ppc64el. 900s Preparing to unpack .../15-libtsan2_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libtsan2:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package libubsan1:ppc64el. 900s Preparing to unpack .../16-libubsan1_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libubsan1:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package libquadmath0:ppc64el. 900s Preparing to unpack .../17-libquadmath0_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package libgcc-15-dev:ppc64el. 900s Preparing to unpack .../18-libgcc-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package gcc-15-powerpc64le-linux-gnu. 900s Preparing to unpack .../19-gcc-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package gcc-15. 900s Preparing to unpack .../20-gcc-15_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 900s Preparing to unpack .../21-gcc-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 900s Unpacking gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 900s Selecting previously unselected package gcc. 900s Preparing to unpack .../22-gcc_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 900s Unpacking gcc (4:15.2.0-4ubuntu1) ... 900s Selecting previously unselected package libstdc++-15-dev:ppc64el. 900s Preparing to unpack .../23-libstdc++-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 900s Selecting previously unselected package g++-15-powerpc64le-linux-gnu. 900s Preparing to unpack .../24-g++-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 900s Unpacking g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 901s Selecting previously unselected package g++-15. 901s Preparing to unpack .../25-g++-15_15.2.0-12ubuntu1_ppc64el.deb ... 901s Unpacking g++-15 (15.2.0-12ubuntu1) ... 901s Selecting previously unselected package g++-powerpc64le-linux-gnu. 901s Preparing to unpack .../26-g++-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 901s Unpacking g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 901s Selecting previously unselected package g++. 901s Preparing to unpack .../27-g++_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 901s Unpacking g++ (4:15.2.0-4ubuntu1) ... 901s Selecting previously unselected package build-essential. 901s Preparing to unpack .../28-build-essential_12.12ubuntu2_ppc64el.deb ... 901s Unpacking build-essential (12.12ubuntu2) ... 901s Selecting previously unselected package dctrl-tools. 901s Preparing to unpack .../29-dctrl-tools_2.24-3build4_ppc64el.deb ... 901s Unpacking dctrl-tools (2.24-3build4) ... 901s Selecting previously unselected package libgfortran-15-dev:ppc64el. 901s Preparing to unpack .../30-libgfortran-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 901s Unpacking libgfortran-15-dev:ppc64el (15.2.0-12ubuntu1) ... 901s Selecting previously unselected package gfortran-15-powerpc64le-linux-gnu. 901s Preparing to unpack .../31-gfortran-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 901s Unpacking gfortran-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 901s Selecting previously unselected package gfortran-15. 901s Preparing to unpack .../32-gfortran-15_15.2.0-12ubuntu1_ppc64el.deb ... 901s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 901s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 901s Preparing to unpack .../33-gfortran-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 901s Unpacking gfortran-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 901s Selecting previously unselected package gfortran. 901s Preparing to unpack .../34-gfortran_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 901s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 901s Selecting previously unselected package icu-devtools. 901s Preparing to unpack .../35-icu-devtools_78.2-1ubuntu1_ppc64el.deb ... 901s Unpacking icu-devtools (78.2-1ubuntu1) ... 901s Selecting previously unselected package libblas-dev:ppc64el. 901s Preparing to unpack .../36-libblas-dev_3.12.1-7ubuntu1_ppc64el.deb ... 901s Unpacking libblas-dev:ppc64el (3.12.1-7ubuntu1) ... 901s Selecting previously unselected package libbz2-dev:ppc64el. 901s Preparing to unpack .../37-libbz2-dev_1.0.8-6build2_ppc64el.deb ... 901s Unpacking libbz2-dev:ppc64el (1.0.8-6build2) ... 901s Selecting previously unselected package libdeflate-dev:ppc64el. 901s Preparing to unpack .../38-libdeflate-dev_1.23-2build1_ppc64el.deb ... 901s Unpacking libdeflate-dev:ppc64el (1.23-2build1) ... 901s Selecting previously unselected package libicu-dev:ppc64el. 901s Preparing to unpack .../39-libicu-dev_78.2-1ubuntu1_ppc64el.deb ... 901s Unpacking libicu-dev:ppc64el (78.2-1ubuntu1) ... 901s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 901s Preparing to unpack .../40-libjpeg-turbo8-dev_2.1.5-4ubuntu3_ppc64el.deb ... 901s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-4ubuntu3) ... 901s Selecting previously unselected package libjpeg8-dev:ppc64el. 901s Preparing to unpack .../41-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 901s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 901s Selecting previously unselected package libjpeg-dev:ppc64el. 901s Preparing to unpack .../42-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 901s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 901s Selecting previously unselected package liblapack-dev:ppc64el. 901s Preparing to unpack .../43-liblapack-dev_3.12.1-7ubuntu1_ppc64el.deb ... 901s Unpacking liblapack-dev:ppc64el (3.12.1-7ubuntu1) ... 902s Selecting previously unselected package libncurses-dev:ppc64el. 902s Preparing to unpack .../44-libncurses-dev_6.6+20251231-1_ppc64el.deb ... 902s Unpacking libncurses-dev:ppc64el (6.6+20251231-1) ... 902s Selecting previously unselected package libpcre2-16-0:ppc64el. 902s Preparing to unpack .../45-libpcre2-16-0_10.46-1_ppc64el.deb ... 902s Unpacking libpcre2-16-0:ppc64el (10.46-1) ... 902s Selecting previously unselected package libpcre2-32-0:ppc64el. 902s Preparing to unpack .../46-libpcre2-32-0_10.46-1_ppc64el.deb ... 902s Unpacking libpcre2-32-0:ppc64el (10.46-1) ... 902s Selecting previously unselected package libpcre2-posix3:ppc64el. 902s Preparing to unpack .../47-libpcre2-posix3_10.46-1_ppc64el.deb ... 902s Unpacking libpcre2-posix3:ppc64el (10.46-1) ... 902s Selecting previously unselected package libpcre2-dev:ppc64el. 902s Preparing to unpack .../48-libpcre2-dev_10.46-1_ppc64el.deb ... 902s Unpacking libpcre2-dev:ppc64el (10.46-1) ... 902s Selecting previously unselected package libpkgconf3:ppc64el. 902s Preparing to unpack .../49-libpkgconf3_1.8.1-4build1_ppc64el.deb ... 902s Unpacking libpkgconf3:ppc64el (1.8.1-4build1) ... 902s Selecting previously unselected package zlib1g-dev:ppc64el. 902s Preparing to unpack .../50-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_ppc64el.deb ... 902s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 902s Selecting previously unselected package libpng-dev:ppc64el. 902s Preparing to unpack .../51-libpng-dev_1.6.54-1_ppc64el.deb ... 902s Unpacking libpng-dev:ppc64el (1.6.54-1) ... 902s Selecting previously unselected package libreadline-dev:ppc64el. 902s Preparing to unpack .../52-libreadline-dev_8.3-3_ppc64el.deb ... 902s Unpacking libreadline-dev:ppc64el (8.3-3) ... 902s Selecting previously unselected package libzstd-dev:ppc64el. 902s Preparing to unpack .../53-libzstd-dev_1.5.7+dfsg-3_ppc64el.deb ... 902s Unpacking libzstd-dev:ppc64el (1.5.7+dfsg-3) ... 902s Selecting previously unselected package liblzma-dev:ppc64el. 902s Preparing to unpack .../54-liblzma-dev_5.8.2-2_ppc64el.deb ... 902s Unpacking liblzma-dev:ppc64el (5.8.2-2) ... 902s Selecting previously unselected package pkgconf-bin. 902s Preparing to unpack .../55-pkgconf-bin_1.8.1-4build1_ppc64el.deb ... 902s Unpacking pkgconf-bin (1.8.1-4build1) ... 902s Selecting previously unselected package pkgconf:ppc64el. 902s Preparing to unpack .../56-pkgconf_1.8.1-4build1_ppc64el.deb ... 902s Unpacking pkgconf:ppc64el (1.8.1-4build1) ... 902s Selecting previously unselected package libtirpc-dev:ppc64el. 902s Preparing to unpack .../57-libtirpc-dev_1.3.6+ds-1_ppc64el.deb ... 902s Unpacking libtirpc-dev:ppc64el (1.3.6+ds-1) ... 902s Selecting previously unselected package r-base-dev. 902s Preparing to unpack .../58-r-base-dev_4.5.2-1ubuntu2_all.deb ... 902s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 902s Selecting previously unselected package pkg-r-autopkgtest. 902s Preparing to unpack .../59-pkg-r-autopkgtest_20250812_all.deb ... 902s Unpacking pkg-r-autopkgtest (20250812) ... 902s Setting up libzstd-dev:ppc64el (1.5.7+dfsg-3) ... 902s Setting up linux-libc-dev:ppc64el (6.19.0-3.3) ... 902s Setting up libpcre2-16-0:ppc64el (10.46-1) ... 902s Setting up libpcre2-32-0:ppc64el (10.46-1) ... 902s Setting up libtirpc-dev:ppc64el (1.3.6+ds-1) ... 902s Setting up libpkgconf3:ppc64el (1.8.1-4build1) ... 902s Setting up rpcsvc-proto (1.4.3-1build1) ... 902s Setting up libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up libmpc3:ppc64el (1.3.1-2) ... 902s Setting up icu-devtools (78.2-1ubuntu1) ... 902s Setting up pkgconf-bin (1.8.1-4build1) ... 902s Setting up liblzma-dev:ppc64el (5.8.2-2) ... 902s Setting up libubsan1:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up libpcre2-posix3:ppc64el (10.46-1) ... 902s Setting up libcrypt-dev:ppc64el (1:4.5.1-1) ... 902s Setting up libasan8:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up libtsan2:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up libisl23:ppc64el (0.27-1build1) ... 902s Setting up libc-dev-bin (2.42-2ubuntu4) ... 902s Setting up libdeflate-dev:ppc64el (1.23-2build1) ... 902s Setting up libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up liblsan0:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up libblas-dev:ppc64el (3.12.1-7ubuntu1) ... 902s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode 902s Setting up dctrl-tools (2.24-3build4) ... 902s Setting up libitm1:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up libgfortran-15-dev:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up pkgconf:ppc64el (1.8.1-4build1) ... 902s Setting up cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 902s Setting up liblapack-dev:ppc64el (3.12.1-7ubuntu1) ... 902s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode 902s Setting up cpp-15 (15.2.0-12ubuntu1) ... 902s Setting up libc6-dev:ppc64el (2.42-2ubuntu4) ... 902s Setting up libicu-dev:ppc64el (78.2-1ubuntu1) ... 902s Setting up cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 902s Setting up libbz2-dev:ppc64el (1.0.8-6build2) ... 902s Setting up libjpeg-turbo8-dev:ppc64el (2.1.5-4ubuntu3) ... 902s Setting up libncurses-dev:ppc64el (6.6+20251231-1) ... 902s Setting up libpcre2-dev:ppc64el (10.46-1) ... 902s Setting up gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 902s Setting up libreadline-dev:ppc64el (8.3-3) ... 902s Setting up gcc-15 (15.2.0-12ubuntu1) ... 902s Setting up libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 902s Setting up gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 902s Setting up gfortran-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 902s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 902s Setting up cpp (4:15.2.0-4ubuntu1) ... 902s Setting up libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 902s Setting up gfortran-15 (15.2.0-12ubuntu1) ... 902s Setting up g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 902s Setting up libpng-dev:ppc64el (1.6.54-1) ... 902s Setting up libjpeg-dev:ppc64el (8c-2ubuntu11) ... 902s Setting up gcc (4:15.2.0-4ubuntu1) ... 902s Setting up gfortran-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 902s Setting up g++-15 (15.2.0-12ubuntu1) ... 902s Setting up g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 902s Setting up gfortran (4:15.2.0-4ubuntu1) ... 902s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 902s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 902s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 902s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 902s Setting up g++ (4:15.2.0-4ubuntu1) ... 902s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 902s Setting up build-essential (12.12ubuntu2) ... 902s Setting up r-base-dev (4.5.2-1ubuntu2) ... 902s Setting up pkg-r-autopkgtest (20250812) ... 902s Processing triggers for libc-bin (2.42-2ubuntu4) ... 902s Processing triggers for man-db (2.13.1-1build1) ... 904s Processing triggers for install-info (7.2-5) ... 905s autopkgtest [22:55:50]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 905s autopkgtest [22:55:50]: test pkg-r-autopkgtest: [----------------------- 906s Test: Try to load the R library adegraphics 906s 906s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 906s Copyright (C) 2025 The R Foundation for Statistical Computing 906s Platform: powerpc64le-unknown-linux-gnu 906s 906s R is free software and comes with ABSOLUTELY NO WARRANTY. 906s You are welcome to redistribute it under certain conditions. 906s Type 'license()' or 'licence()' for distribution details. 906s 906s R is a collaborative project with many contributors. 906s Type 'contributors()' for more information and 906s 'citation()' on how to cite R or R packages in publications. 906s 906s Type 'demo()' for some demos, 'help()' for on-line help, or 906s 'help.start()' for an HTML browser interface to help. 906s Type 'q()' to quit R. 906s 906s > library('adegraphics') 906s Registered S3 methods overwritten by 'adegraphics': 906s method from 906s biplot.dudi ade4 906s kplot.foucart ade4 906s kplot.mcoa ade4 906s kplot.mfa ade4 906s kplot.pta ade4 906s kplot.sepan ade4 906s kplot.statis ade4 906s scatter.coa ade4 906s scatter.dudi ade4 906s scatter.nipals ade4 906s scatter.pco ade4 906s score.acm ade4 906s score.mix ade4 906s score.pca ade4 906s screeplot.dudi ade4 906s > 907s autopkgtest [22:55:52]: test pkg-r-autopkgtest: -----------------------] 907s pkg-r-autopkgtest PASS 907s autopkgtest [22:55:52]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 907s autopkgtest [22:55:52]: @@@@@@@@@@@@@@@@@@@@ summary 907s run-unit-test PASS 907s pkg-r-autopkgtest PASS