0s autopkgtest [22:40:45]: starting date and time: 2026-02-09 22:40:45+0000 0s autopkgtest [22:40:45]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [22:40:45]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6nile7fj/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lattice --apt-upgrade r-bioc-shortread --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lattice/0.22-9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-ppc64el-18.secgroup --name adt-resolute-ppc64el-r-bioc-shortread-20260209-224045-juju-7f2275-prod-proposed-migration-environment-2-dc482982-5ade-47d0-bce1-9174418f9400 --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-ppc64el-r-bioc-shortread-20260209-224045-juju-7f2275-prod-proposed-migration-environment-2-dc482982-5ade-47d0-bce1-9174418f9400 from image adt/ubuntu-resolute-ppc64el-server-20260209.img (UUID f7f31435-4cd1-4090-aa55-59cfefa097ca)... 128s autopkgtest [22:42:53]: testbed dpkg architecture: ppc64el 129s autopkgtest [22:42:54]: testbed apt version: 3.1.15 129s autopkgtest [22:42:54]: @@@@@@@@@@@@@@@@@@@@ test bed setup 129s autopkgtest [22:42:54]: testbed release detected to be: None 130s autopkgtest [22:42:55]: updating testbed package index (apt update) 130s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 130s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 130s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 130s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 130s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 130s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 133s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 133s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [246 kB] 133s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1534 kB] 135s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [19.4 kB] 136s Fetched 3774 kB in 6s (655 kB/s) 136s Reading package lists... 137s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 137s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 137s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 137s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 138s Reading package lists... 138s Reading package lists... 138s Building dependency tree... 138s Reading state information... 138s Calculating upgrade... 138s The following packages will be upgraded: 138s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 138s libip6tc2 libxtables12 wget 139s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 139s Need to get 3125 kB of archives. 139s After this operation, 78.8 kB of additional disk space will be used. 139s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el iptables ppc64el 1.8.11-2ubuntu3 [464 kB] 139s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip4tc2 ppc64el 1.8.11-2ubuntu3 [27.8 kB] 139s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip6tc2 ppc64el 1.8.11-2ubuntu3 [28.2 kB] 139s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxtables12 ppc64el 1.8.11-2ubuntu3 [41.2 kB] 139s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el iproute2 ppc64el 6.18.0-1ubuntu1 [1458 kB] 142s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcryptsetup12 ppc64el 2:2.8.0-1ubuntu3 [404 kB] 143s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el wget ppc64el 1.25.0-2ubuntu4 [401 kB] 143s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cryptsetup-bin ppc64el 2:2.8.0-1ubuntu3 [250 kB] 143s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el dracut-install ppc64el 109-11ubuntu1 [51.3 kB] 143s dpkg-preconfigure: unable to re-open stdin: No such file or directory 143s Fetched 3125 kB in 5s (668 kB/s) 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122003 files and directories currently installed.) 144s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_ppc64el.deb ... 144s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 144s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_ppc64el.deb ... 144s Unpacking libip4tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 144s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_ppc64el.deb ... 144s Unpacking libip6tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 144s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_ppc64el.deb ... 144s Unpacking libxtables12:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 144s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_ppc64el.deb ... 144s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 145s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 145s Unpacking libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 145s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_ppc64el.deb ... 145s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 145s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 145s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 145s Preparing to unpack .../8-dracut-install_109-11ubuntu1_ppc64el.deb ... 145s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 145s Setting up libip4tc2:ppc64el (1.8.11-2ubuntu3) ... 145s Setting up wget (1.25.0-2ubuntu4) ... 146s Setting up libip6tc2:ppc64el (1.8.11-2ubuntu3) ... 146s Setting up libxtables12:ppc64el (1.8.11-2ubuntu3) ... 146s Setting up dracut-install (109-11ubuntu1) ... 146s Setting up libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) ... 146s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 146s Setting up iptables (1.8.11-2ubuntu3) ... 146s Setting up iproute2 (6.18.0-1ubuntu1) ... 146s Processing triggers for man-db (2.13.1-1build1) ... 148s Processing triggers for install-info (7.2-5) ... 148s Processing triggers for libc-bin (2.42-2ubuntu4) ... 149s autopkgtest [22:43:14]: upgrading testbed (apt dist-upgrade and autopurge) 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Calculating upgrade... 149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Solving dependencies... 149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 152s autopkgtest [22:43:17]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:13:51 UTC 2026 152s autopkgtest [22:43:17]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-shortread 163s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-shortread 1.64.0-3 (dsc) [2409 B] 163s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-shortread 1.64.0-3 (tar) [5321 kB] 163s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-shortread 1.64.0-3 (diff) [6160 B] 163s gpgv: Signature made Mon Jan 27 12:34:30 2025 UTC 163s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 163s gpgv: issuer "crusoe@debian.org" 163s gpgv: Can't check signature: No public key 163s dpkg-source: warning: cannot verify inline signature for ./r-bioc-shortread_1.64.0-3.dsc: no acceptable signature found 164s autopkgtest [22:43:29]: testing package r-bioc-shortread version 1.64.0-3 164s autopkgtest [22:43:29]: build not needed 166s autopkgtest [22:43:31]: test pkg-r-autopkgtest: preparing testbed 166s Reading package lists... 166s Building dependency tree... 166s Reading state information... 166s Solving dependencies... 167s The following NEW packages will be installed: 167s build-essential cpp cpp-15 cpp-15-powerpc64le-linux-gnu 167s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 167s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 167s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-15 167s g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-15 167s gcc-15-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-15 167s gfortran-15-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 167s icu-devtools javascript-common libasan8 libbibtex-parser-perl libblas-dev 167s libblas3 libboost-dev libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev 167s libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 167s libfontconfig1 libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 167s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 167s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 167s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 167s libjs-highlight.js libjs-jquery libjs-jquery-datatables 167s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 167s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 167s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 167s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 167s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev 167s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 167s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 167s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libquadmath0 167s libreadline-dev libsharpyuv0 libsm6 libstdc++-15-dev libsynctex2 libtcl8.6 167s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 167s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 167s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzstd-dev 167s libzzip-0-13t64 linux-libc-dev node-bootstrap-sass node-html5shiv 167s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 167s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 167s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 167s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 167s r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata 167s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 167s r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics r-bioc-pwalign 167s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 167s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 167s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 167s r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager 167s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown 167s r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark 167s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr 167s r-cran-deldir r-cran-digest r-cran-dplyr r-cran-evaluate r-cran-fansi 167s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 167s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 167s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 167s r-cran-httr2 r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib 167s r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice 167s r-cran-latticeextra r-cran-lifecycle r-cran-littler r-cran-magrittr 167s r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 167s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 167s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 167s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen 167s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 167s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-snow 167s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble 167s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs 167s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 167s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 167s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 167s zlib1g-dev 167s 0 upgraded, 286 newly installed, 0 to remove and 0 not upgraded. 167s Need to get 454 MB of archives. 167s After this operation, 1507 MB of additional disk space will be used. 167s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc-dev-bin ppc64el 2.42-2ubuntu4 [23.9 kB] 167s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el linux-libc-dev ppc64el 6.19.0-3.3 [1832 kB] 170s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcrypt-dev ppc64el 1:4.5.1-1 [162 kB] 170s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el rpcsvc-proto ppc64el 1.4.3-1build1 [84.2 kB] 170s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc6-dev ppc64el 2.42-2ubuntu4 [2080 kB] 173s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libisl23 ppc64el 0.27-1build1 [893 kB] 174s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmpc3 ppc64el 1.3.1-2 [62.5 kB] 174s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [11.4 MB] 192s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15 ppc64el 15.2.0-12ubuntu1 [1038 B] 192s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [5746 B] 192s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp ppc64el 4:15.2.0-4ubuntu1 [22.4 kB] 192s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcc1-0 ppc64el 15.2.0-12ubuntu1 [49.0 kB] 192s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-12ubuntu1 [169 kB] 193s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el libitm1 ppc64el 15.2.0-12ubuntu1 [32.2 kB] 193s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el libasan8 ppc64el 15.2.0-12ubuntu1 [3006 kB] 197s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblsan0 ppc64el 15.2.0-12ubuntu1 [1374 kB] 200s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtsan2 ppc64el 15.2.0-12ubuntu1 [2729 kB] 204s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el libubsan1 ppc64el 15.2.0-12ubuntu1 [1231 kB] 206s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el libquadmath0 ppc64el 15.2.0-12ubuntu1 [160 kB] 206s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgcc-15-dev ppc64el 15.2.0-12ubuntu1 [1670 kB] 209s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [22.4 MB] 242s Get:22 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15 ppc64el 15.2.0-12ubuntu1 [530 kB] 243s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1220 B] 243s Get:24 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc ppc64el 4:15.2.0-4ubuntu1 [5032 B] 243s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el libstdc++-15-dev ppc64el 15.2.0-12ubuntu1 [2747 kB] 249s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [13.0 MB] 270s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15 ppc64el 15.2.0-12ubuntu1 [25.3 kB] 270s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [970 B] 270s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++ ppc64el 4:15.2.0-4ubuntu1 [1092 B] 270s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el build-essential ppc64el 12.12ubuntu2 [5256 B] 270s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el dctrl-tools ppc64el 2.24-3build4 [108 kB] 270s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-mono all 2.37-8build1 [502 kB] 270s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-core all 2.37-8build1 [834 kB] 271s Get:34 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig-config ppc64el 2.17.1-3ubuntu1 [38.5 kB] 271s Get:35 http://ftpmaster.internal/ubuntu resolute/main ppc64el libfontconfig1 ppc64el 2.17.1-3ubuntu1 [193 kB] 271s Get:36 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig ppc64el 2.17.1-3ubuntu1 [182 kB] 271s Get:37 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 272s Get:38 http://ftpmaster.internal/ubuntu resolute/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 272s Get:39 http://ftpmaster.internal/ubuntu resolute/universe ppc64el fonts-lmodern all 2.005-1build1 [4788 kB] 279s Get:40 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 283s Get:41 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran5 ppc64el 15.2.0-12ubuntu1 [620 kB] 284s Get:42 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran-15-dev ppc64el 15.2.0-12ubuntu1 [651 kB] 285s Get:43 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [12.3 MB] 305s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-15 ppc64el 15.2.0-12ubuntu1 [18.1 kB] 305s Get:45 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1020 B] 305s Get:46 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran ppc64el 4:15.2.0-4ubuntu1 [1166 B] 305s Get:47 http://ftpmaster.internal/ubuntu resolute/main ppc64el icu-devtools ppc64el 78.2-1ubuntu1 [246 kB] 305s Get:48 http://ftpmaster.internal/ubuntu resolute/main ppc64el javascript-common all 12+nmu1build1 [4864 B] 305s Get:49 http://ftpmaster.internal/ubuntu resolute/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 305s Get:50 http://ftpmaster.internal/ubuntu resolute/universe ppc64el liblatex-tounicode-perl all 1.93-1 [29.2 kB] 305s Get:51 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libbibtex-parser-perl all 1.93+dfsg-1 [17.4 kB] 305s Get:52 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas3 ppc64el 3.12.1-7ubuntu1 [291 kB] 305s Get:53 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas-dev ppc64el 3.12.1-7ubuntu1 [306 kB] 305s Get:54 http://ftpmaster.internal/ubuntu resolute/main ppc64el libboost1.90-dev ppc64el 1.90.0-2ubuntu1 [11.5 MB] 326s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el libboost-dev ppc64el 1.90.0.0ubuntu3 [4766 B] 326s Get:56 http://ftpmaster.internal/ubuntu resolute/main ppc64el libbz2-dev ppc64el 1.0.8-6build2 [50.0 kB] 326s Get:57 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpixman-1-0 ppc64el 0.46.4-1 [347 kB] 326s Get:58 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-render0 ppc64el 1.17.0-2ubuntu1 [17.4 kB] 326s Get:59 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-shm0 ppc64el 1.17.0-2ubuntu1 [6072 B] 326s Get:60 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxrender1 ppc64el 1:0.9.12-1 [23.0 kB] 326s Get:61 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcairo2 ppc64el 1.18.4-3 [759 kB] 328s Get:62 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdatrie1 ppc64el 0.2.14-1 [22.7 kB] 328s Get:63 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate0 ppc64el 1.23-2build1 [64.1 kB] 328s Get:64 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate-dev ppc64el 1.23-2build1 [71.8 kB] 328s Get:65 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgraphite2-3 ppc64el 1.3.14-11ubuntu1 [85.3 kB] 328s Get:66 http://ftpmaster.internal/ubuntu resolute/main ppc64el libharfbuzz0b ppc64el 12.3.2-1 [663 kB] 329s Get:67 http://ftpmaster.internal/ubuntu resolute/main ppc64el x11-common all 1:7.7+24ubuntu1 [22.4 kB] 329s Get:68 http://ftpmaster.internal/ubuntu resolute/main ppc64el libice6 ppc64el 2:1.1.1-1build1 [51.9 kB] 329s Get:69 http://ftpmaster.internal/ubuntu resolute/main ppc64el libicu-dev ppc64el 78.2-1ubuntu1 [13.3 MB] 350s Get:70 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-4ubuntu3 [214 kB] 350s Get:71 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-4ubuntu3 [358 kB] 350s Get:72 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 350s Get:73 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 350s Get:74 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 350s Get:75 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 350s Get:76 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 350s Get:77 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 352s Get:78 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-d3 all 3.5.17-4build1 [136 kB] 352s Get:79 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 352s Get:80 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 352s Get:81 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 352s Get:82 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 352s Get:83 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 352s Get:84 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 352s Get:85 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 352s Get:86 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 352s Get:87 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 352s Get:88 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 352s Get:89 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 352s Get:90 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libkpathsea6 ppc64el 2025.20250727.75242+ds-5build1 [74.7 kB] 352s Get:91 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack3 ppc64el 3.12.1-7ubuntu1 [2960 kB] 362s Get:92 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack-dev ppc64el 3.12.1-7ubuntu1 [6357 kB] 371s Get:93 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu2 [315 kB] 371s Get:94 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblua5.4-0 ppc64el 5.4.8-1 [213 kB] 371s Get:95 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libmpfi0 ppc64el 1.5.4+ds-4build1 [39.6 kB] 371s Get:96 http://ftpmaster.internal/ubuntu resolute/main ppc64el libncurses-dev ppc64el 6.6+20251231-1 [505 kB] 371s Get:97 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai-data all 0.1.30-1 [155 kB] 371s Get:98 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai0 ppc64el 0.1.30-1 [22.5 kB] 371s Get:99 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpango-1.0-0 ppc64el 1.57.0-1 [283 kB] 371s Get:100 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangoft2-1.0-0 ppc64el 1.57.0-1 [61.2 kB] 371s Get:101 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangocairo-1.0-0 ppc64el 1.57.0-1 [31.0 kB] 371s Get:102 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper2 ppc64el 2.2.5-0.3build1 [18.1 kB] 371s Get:103 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper-utils ppc64el 2.2.5-0.3build1 [15.7 kB] 372s Get:104 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-16-0 ppc64el 10.46-1 [292 kB] 372s Get:105 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-32-0 ppc64el 10.46-1 [275 kB] 372s Get:106 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-posix3 ppc64el 10.46-1 [7334 B] 372s Get:107 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-dev ppc64el 10.46-1 [937 kB] 373s Get:108 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpkgconf3 ppc64el 1.8.1-4build1 [37.9 kB] 373s Get:109 http://ftpmaster.internal/ubuntu resolute/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [903 kB] 374s Get:110 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpng-dev ppc64el 1.6.54-1 [326 kB] 374s Get:111 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libpotrace0 ppc64el 1.16-2build2 [23.8 kB] 374s Get:112 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libptexenc1 ppc64el 2025.20250727.75242+ds-5build1 [49.5 kB] 374s Get:113 http://ftpmaster.internal/ubuntu resolute/main ppc64el libreadline-dev ppc64el 8.3-3 [252 kB] 374s Get:114 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1build1 [24.7 kB] 374s Get:115 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsm6 ppc64el 2:1.2.6-1build1 [18.6 kB] 374s Get:116 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsynctex2 ppc64el 2025.20250727.75242+ds-5build1 [70.5 kB] 374s Get:117 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtcl8.6 ppc64el 8.6.17+dfsg-1build1 [1239 kB] 377s Get:118 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libteckit0 ppc64el 2.5.13+ds-1 [407 kB] 377s Get:119 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libtexlua53-5 ppc64el 2025.20250727.75242+ds-5build1 [166 kB] 377s Get:120 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu3 [37.1 kB] 377s Get:121 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebp7 ppc64el 1.5.0-0.1build1 [330 kB] 377s Get:122 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu3 [307 kB] 377s Get:123 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxft2 ppc64el 2.3.6-1build2 [61.6 kB] 377s Get:124 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxss1 ppc64el 1:1.2.3-1build4 [7470 B] 377s Get:125 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtk8.6 ppc64el 8.6.17-1 [968 kB] 379s Get:126 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.3 [203 kB] 379s Get:127 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxmu6 ppc64el 2:1.1.3-4 [56.9 kB] 379s Get:128 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxpm4 ppc64el 1:3.5.17-1build3 [50.5 kB] 379s Get:129 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxaw7 ppc64el 2:1.0.16-1build1 [234 kB] 379s Get:130 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxi6 ppc64el 2:1.8.2-2 [37.0 kB] 379s Get:131 http://ftpmaster.internal/ubuntu resolute/main ppc64el libzstd-dev ppc64el 1.5.7+dfsg-3 [528 kB] 380s Get:132 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libzzip-0-13t64 ppc64el 0.13.78+dfsg.1-0.2 [33.7 kB] 380s Get:133 http://ftpmaster.internal/ubuntu resolute/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 380s Get:134 http://ftpmaster.internal/ubuntu resolute/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 380s Get:135 http://ftpmaster.internal/ubuntu resolute/universe ppc64el node-normalize.css all 8.0.1-5.1 [10.4 kB] 380s Get:136 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pandoc-data all 3.1.11.1-3build1 [78.8 kB] 380s Get:137 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pandoc ppc64el 3.1.11.1+ds-4 [30.9 MB] 434s Get:138 http://ftpmaster.internal/ubuntu resolute/main ppc64el zip ppc64el 3.0-15ubuntu3 [198 kB] 434s Get:139 http://ftpmaster.internal/ubuntu resolute/main ppc64el unzip ppc64el 6.0-29ubuntu1 [200 kB] 434s Get:140 http://ftpmaster.internal/ubuntu resolute/main ppc64el xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 434s Get:141 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-core ppc64el 4.5.2-1ubuntu2 [29.3 MB] 483s Get:142 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblzma-dev ppc64el 5.8.2-2 [210 kB] 483s Get:143 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf-bin ppc64el 1.8.1-4build1 [22.7 kB] 483s Get:144 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf ppc64el 1.8.1-4build1 [16.8 kB] 483s Get:145 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtirpc-dev ppc64el 1.3.6+ds-1 [223 kB] 483s Get:146 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-dev all 4.5.2-1ubuntu2 [1880 B] 483s Get:147 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pkg-r-autopkgtest all 20250812 [6158 B] 483s Get:148 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biocgenerics all 0.52.0-2 [624 kB] 484s Get:149 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biobase ppc64el 2.66.0-2 [2341 kB] 490s Get:150 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-s4vectors ppc64el 0.44.0+dfsg-2 [2078 kB] 494s Get:151 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-iranges ppc64el 2.40.1-3 [2309 kB] 498s Get:152 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dbi all 1.2.3-1build1 [855 kB] 499s Get:153 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bit ppc64el 4.6.0+dfsg-1 [475 kB] 499s Get:154 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bit64 ppc64el 4.6.0-1-4 [507 kB] 499s Get:155 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rlang ppc64el 1.1.5-3 [1738 kB] 502s Get:156 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cli ppc64el 3.6.4-1 [1411 kB] 505s Get:157 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-glue ppc64el 1.8.0-1 [165 kB] 505s Get:158 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 505s Get:159 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 508s Get:160 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-blob all 1.3.0-1 [54.1 kB] 508s Get:161 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fastmap ppc64el 1.2.0-1 [75.0 kB] 508s Get:162 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cachem ppc64el 1.1.0-1 [74.1 kB] 508s Get:163 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-memoise all 2.0.1-1build1 [54.5 kB] 508s Get:164 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 508s Get:165 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-plogr all 0.2.0-3build2 [15.8 kB] 508s Get:166 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cpp11 all 0.5.3-1 [242 kB] 508s Get:167 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rsqlite ppc64el 2.3.9-1 [1572 kB] 510s Get:168 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-curl ppc64el 7.0.0+dfsg-1 [205 kB] 510s Get:169 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-jsonlite ppc64el 1.9.1+dfsg-1 [452 kB] 510s Get:170 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mime ppc64el 0.12-2 [35.9 kB] 510s Get:171 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sys ppc64el 3.4.3-1 [45.5 kB] 510s Get:172 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-askpass ppc64el 1.2.1-1 [24.9 kB] 510s Get:173 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-openssl ppc64el 2.3.2+dfsg-1 [409 kB] 510s Get:174 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-r6 all 2.6.1-1 [101 kB] 510s Get:175 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 510s Get:176 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-png ppc64el 0.1-8-1build2 [44.3 kB] 510s Get:177 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 510s Get:178 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-xvector ppc64el 0.46.0-2 [629 kB] 511s Get:179 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 511s Get:180 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 536s Get:181 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 542s Get:182 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-crayon all 1.5.3-1 [165 kB] 542s Get:183 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biostrings ppc64el 2.74.1+dfsg-2 [13.3 MB] 565s Get:184 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 565s Get:185 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 574s Get:186 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-generics all 0.1.4-1 [84.0 kB] 574s Get:187 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 574s Get:188 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 574s Get:189 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 574s Get:190 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fansi ppc64el 1.0.6-2 [637 kB] 575s Get:191 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-3 [420 kB] 575s Get:192 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-withr all 3.0.2+dfsg-1 [214 kB] 575s Get:193 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tidyselect ppc64el 1.2.1+dfsg-1 [222 kB] 575s Get:194 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dplyr ppc64el 1.1.4-4 [1542 kB] 578s Get:195 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-purrr ppc64el 1.0.4-1 [555 kB] 579s Get:196 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-stringi ppc64el 1.8.4-1build2 [947 kB] 581s Get:197 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 581s Get:198 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 582s Get:199 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dbplyr all 2.5.1+dfsg-1 [1237 kB] 584s Get:200 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 584s Get:201 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 584s Get:202 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 584s Get:203 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-formatr all 1.14-2 [152 kB] 584s Get:204 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lambda.r all 1.2.4-2build2 [118 kB] 584s Get:205 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-futile.options all 1.0.1-3build2 [20.5 kB] 584s Get:206 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-futile.logger all 1.4.3-4build2 [98.4 kB] 584s Get:207 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-snow all 1:0.4.4-2build1 [98.7 kB] 584s Get:208 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-codetools all 0.2-20-1build1 [91.1 kB] 584s Get:209 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 585s Get:210 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biocparallel ppc64el 1.40.0-2 [1346 kB] 587s Get:211 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3build1 [29.3 kB] 587s Get:212 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-digest ppc64el 0.6.39-1 [238 kB] 587s Get:213 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-htmltools ppc64el 0.5.8.1-1 [373 kB] 587s Get:214 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-evaluate all 1.0.5-1 [117 kB] 587s Get:215 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xfun ppc64el 0.55+dfsg-1 [589 kB] 588s Get:216 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-highr all 0.11+dfsg-1 [38.5 kB] 588s Get:217 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-yaml ppc64el 2.3.10-1 [123 kB] 588s Get:218 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 600s Get:219 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-knitr all 1.51+dfsg-1 [847 kB] 601s Get:220 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 601s Get:221 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fs ppc64el 1.6.5+dfsg-1 [248 kB] 601s Get:222 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1build1 [49.4 kB] 601s Get:223 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sass ppc64el 0.4.9+dfsg-1 [1034 kB] 603s Get:224 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 612s Get:225 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fontawesome all 0.5.3-1 [1331 kB] 614s Get:226 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-tinytex all 0.58-1 [148 kB] 614s Get:227 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-modernizr all 3.13.0-0.1build1 [100 kB] 614s Get:228 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-littler ppc64el 0.3.22-1 [85.5 kB] 614s Get:229 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 614s Get:230 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcpp ppc64el 1.1.0-1 [2037 kB] 617s Get:231 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-later ppc64el 1.4.1+dfsg-1 [153 kB] 617s Get:232 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-promises ppc64el 1.3.2+dfsg-1 [297 kB] 617s Get:233 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-httpuv ppc64el 1.6.15+dfsg-1 [521 kB] 617s Get:234 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xtable all 1:1.8-4-2build1 [691 kB] 618s Get:235 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 618s Get:236 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-commonmark ppc64el 1.9.5-1 [142 kB] 618s Get:237 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 618s Get:238 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 624s Get:239 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 626s Get:240 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 629s Get:241 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 629s Get:242 http://ftpmaster.internal/ubuntu resolute/universe ppc64el tex-common all 6.20 [30.0 kB] 629s Get:243 http://ftpmaster.internal/ubuntu resolute/main ppc64el t1utils ppc64el 1.41-4build4 [76.9 kB] 629s Get:244 http://ftpmaster.internal/ubuntu resolute/universe ppc64el texlive-binaries ppc64el 2025.20250727.75242+ds-5build1 [12.6 MB] 653s Get:245 http://ftpmaster.internal/ubuntu resolute/universe ppc64el texlive-base all 2025.20260124-1 [22.8 MB] 705s Get:246 http://ftpmaster.internal/ubuntu resolute/universe ppc64el texlive-latex-base all 2025.20260124-1 [1321 kB] 707s Get:247 http://ftpmaster.internal/ubuntu resolute/universe ppc64el texlive-bibtex-extra all 2025.20260124-1 [80.6 MB] 863s Get:248 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biocversion all 3.20.0-2 [11.1 kB] 863s Get:249 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 863s Get:250 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-hms all 1.1.4-1 [102 kB] 863s Get:251 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 863s Get:252 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 863s Get:253 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-httr2 all 1.1.1-2 [752 kB] 864s Get:254 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xml2 ppc64el 1.4.1-1 [333 kB] 864s Get:255 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 864s Get:256 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el r-cran-lattice ppc64el 0.22-9-1 [1399 kB] 867s Get:257 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-matrix ppc64el 1.7-4-1 [4584 kB] 874s Get:258 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-matrixstats ppc64el 1.5.0-1 [578 kB] 875s Get:259 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 875s Get:260 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-abind all 1.4-8-1build1 [67.0 kB] 875s Get:261 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-s4arrays ppc64el 1.6.0+dfsg-2 [701 kB] 876s Get:262 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-sparsearray ppc64el 1.6.2+dfsg-2 [1418 kB] 878s Get:263 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-delayedarray ppc64el 0.32.0+dfsg-2 [2068 kB] 881s Get:264 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genomicranges ppc64el 1.58.0+dfsg-2 [2088 kB] 884s Get:265 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 885s Get:266 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bitops ppc64el 1.0-9-1 [30.4 kB] 886s Get:267 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-rhtslib ppc64el 3.2.0+dfsg-2 [1620 kB] 888s Get:268 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-rsamtools ppc64el 2.22.0+dfsg-2 [3855 kB] 893s Get:269 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genomicalignments ppc64el 1.42.0-2 [2158 kB] 897s Get:270 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xml ppc64el 3.99-0.20-1 [1761 kB] 899s Get:271 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcurl ppc64el 1.98-1.16+dfsg-1 [810 kB] 900s Get:272 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rjson ppc64el 0.2.23-1 [106 kB] 900s Get:273 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 900s Get:274 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-rtracklayer ppc64el 1.66.0-3 [5257 kB] 909s Get:275 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 911s Get:276 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-pwalign ppc64el 1.2.0-3 [762 kB] 912s Get:277 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-hwriter all 1.3.2.1-1 [106 kB] 912s Get:278 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-jpeg ppc64el 0.1-10-1 [37.0 kB] 912s Get:279 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 912s Get:280 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-deldir ppc64el 2.0-4-1build1 [273 kB] 912s Get:281 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcppeigen ppc64el 0.3.4.0.2-1 [1477 kB] 914s Get:282 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-interp ppc64el 1.1-6-1 [1492 kB] 917s Get:283 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mass ppc64el 7.3-65-1 [1116 kB] 918s Get:284 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-latticeextra all 0.6-31-1 [2177 kB] 921s Get:285 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-shortread ppc64el 1.64.0-3 [5292 kB] 929s Get:286 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-runit all 0.4.33.1-1 [250 kB] 930s Preconfiguring packages ... 930s Fetched 454 MB in 12min 43s (596 kB/s) 930s Selecting previously unselected package libc-dev-bin. 930s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122006 files and directories currently installed.) 930s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_ppc64el.deb ... 930s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 930s Selecting previously unselected package linux-libc-dev:ppc64el. 930s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_ppc64el.deb ... 930s Unpacking linux-libc-dev:ppc64el (6.19.0-3.3) ... 930s Selecting previously unselected package libcrypt-dev:ppc64el. 930s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_ppc64el.deb ... 930s Unpacking libcrypt-dev:ppc64el (1:4.5.1-1) ... 930s Selecting previously unselected package rpcsvc-proto. 930s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_ppc64el.deb ... 930s Unpacking rpcsvc-proto (1.4.3-1build1) ... 930s Selecting previously unselected package libc6-dev:ppc64el. 930s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_ppc64el.deb ... 930s Unpacking libc6-dev:ppc64el (2.42-2ubuntu4) ... 930s Selecting previously unselected package libisl23:ppc64el. 930s Preparing to unpack .../005-libisl23_0.27-1build1_ppc64el.deb ... 930s Unpacking libisl23:ppc64el (0.27-1build1) ... 930s Selecting previously unselected package libmpc3:ppc64el. 930s Preparing to unpack .../006-libmpc3_1.3.1-2_ppc64el.deb ... 930s Unpacking libmpc3:ppc64el (1.3.1-2) ... 930s Selecting previously unselected package cpp-15-powerpc64le-linux-gnu. 930s Preparing to unpack .../007-cpp-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 930s Unpacking cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 930s Selecting previously unselected package cpp-15. 930s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_ppc64el.deb ... 930s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 930s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 930s Preparing to unpack .../009-cpp-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 930s Unpacking cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 930s Selecting previously unselected package cpp. 930s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 930s Unpacking cpp (4:15.2.0-4ubuntu1) ... 930s Selecting previously unselected package libcc1-0:ppc64el. 930s Preparing to unpack .../011-libcc1-0_15.2.0-12ubuntu1_ppc64el.deb ... 930s Unpacking libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 930s Selecting previously unselected package libgomp1:ppc64el. 930s Preparing to unpack .../012-libgomp1_15.2.0-12ubuntu1_ppc64el.deb ... 930s Unpacking libgomp1:ppc64el (15.2.0-12ubuntu1) ... 930s Selecting previously unselected package libitm1:ppc64el. 930s Preparing to unpack .../013-libitm1_15.2.0-12ubuntu1_ppc64el.deb ... 930s Unpacking libitm1:ppc64el (15.2.0-12ubuntu1) ... 930s Selecting previously unselected package libasan8:ppc64el. 930s Preparing to unpack .../014-libasan8_15.2.0-12ubuntu1_ppc64el.deb ... 930s Unpacking libasan8:ppc64el (15.2.0-12ubuntu1) ... 930s Selecting previously unselected package liblsan0:ppc64el. 930s Preparing to unpack .../015-liblsan0_15.2.0-12ubuntu1_ppc64el.deb ... 930s Unpacking liblsan0:ppc64el (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package libtsan2:ppc64el. 931s Preparing to unpack .../016-libtsan2_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking libtsan2:ppc64el (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package libubsan1:ppc64el. 931s Preparing to unpack .../017-libubsan1_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking libubsan1:ppc64el (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package libquadmath0:ppc64el. 931s Preparing to unpack .../018-libquadmath0_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package libgcc-15-dev:ppc64el. 931s Preparing to unpack .../019-libgcc-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package gcc-15-powerpc64le-linux-gnu. 931s Preparing to unpack .../020-gcc-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package gcc-15. 931s Preparing to unpack .../021-gcc-15_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 931s Preparing to unpack .../022-gcc-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 931s Unpacking gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 931s Selecting previously unselected package gcc. 931s Preparing to unpack .../023-gcc_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 931s Unpacking gcc (4:15.2.0-4ubuntu1) ... 931s Selecting previously unselected package libstdc++-15-dev:ppc64el. 931s Preparing to unpack .../024-libstdc++-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package g++-15-powerpc64le-linux-gnu. 931s Preparing to unpack .../025-g++-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package g++-15. 931s Preparing to unpack .../026-g++-15_15.2.0-12ubuntu1_ppc64el.deb ... 931s Unpacking g++-15 (15.2.0-12ubuntu1) ... 931s Selecting previously unselected package g++-powerpc64le-linux-gnu. 931s Preparing to unpack .../027-g++-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 931s Unpacking g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 931s Selecting previously unselected package g++. 931s Preparing to unpack .../028-g++_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 931s Unpacking g++ (4:15.2.0-4ubuntu1) ... 931s Selecting previously unselected package build-essential. 931s Preparing to unpack .../029-build-essential_12.12ubuntu2_ppc64el.deb ... 931s Unpacking build-essential (12.12ubuntu2) ... 932s Selecting previously unselected package dctrl-tools. 932s Preparing to unpack .../030-dctrl-tools_2.24-3build4_ppc64el.deb ... 932s Unpacking dctrl-tools (2.24-3build4) ... 932s Selecting previously unselected package fonts-dejavu-mono. 932s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8build1_all.deb ... 932s Unpacking fonts-dejavu-mono (2.37-8build1) ... 932s Selecting previously unselected package fonts-dejavu-core. 932s Preparing to unpack .../032-fonts-dejavu-core_2.37-8build1_all.deb ... 932s Unpacking fonts-dejavu-core (2.37-8build1) ... 932s Selecting previously unselected package fontconfig-config. 932s Preparing to unpack .../033-fontconfig-config_2.17.1-3ubuntu1_ppc64el.deb ... 932s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 932s Selecting previously unselected package libfontconfig1:ppc64el. 932s Preparing to unpack .../034-libfontconfig1_2.17.1-3ubuntu1_ppc64el.deb ... 932s Unpacking libfontconfig1:ppc64el (2.17.1-3ubuntu1) ... 932s Selecting previously unselected package fontconfig. 932s Preparing to unpack .../035-fontconfig_2.17.1-3ubuntu1_ppc64el.deb ... 932s Unpacking fontconfig (2.17.1-3ubuntu1) ... 932s Selecting previously unselected package fonts-font-awesome. 932s Preparing to unpack .../036-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 932s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 932s Selecting previously unselected package fonts-glyphicons-halflings. 932s Preparing to unpack .../037-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 932s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 932s Selecting previously unselected package fonts-lmodern. 932s Preparing to unpack .../038-fonts-lmodern_2.005-1build1_all.deb ... 932s Unpacking fonts-lmodern (2.005-1build1) ... 932s Selecting previously unselected package fonts-mathjax. 932s Preparing to unpack .../039-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 932s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 932s Selecting previously unselected package libgfortran5:ppc64el. 932s Preparing to unpack .../040-libgfortran5_15.2.0-12ubuntu1_ppc64el.deb ... 932s Unpacking libgfortran5:ppc64el (15.2.0-12ubuntu1) ... 932s Selecting previously unselected package libgfortran-15-dev:ppc64el. 932s Preparing to unpack .../041-libgfortran-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 932s Unpacking libgfortran-15-dev:ppc64el (15.2.0-12ubuntu1) ... 932s Selecting previously unselected package gfortran-15-powerpc64le-linux-gnu. 932s Preparing to unpack .../042-gfortran-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 932s Unpacking gfortran-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 932s Selecting previously unselected package gfortran-15. 932s Preparing to unpack .../043-gfortran-15_15.2.0-12ubuntu1_ppc64el.deb ... 932s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 932s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 932s Preparing to unpack .../044-gfortran-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 932s Unpacking gfortran-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 932s Selecting previously unselected package gfortran. 932s Preparing to unpack .../045-gfortran_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 932s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 932s Selecting previously unselected package icu-devtools. 932s Preparing to unpack .../046-icu-devtools_78.2-1ubuntu1_ppc64el.deb ... 932s Unpacking icu-devtools (78.2-1ubuntu1) ... 932s Selecting previously unselected package javascript-common. 932s Preparing to unpack .../047-javascript-common_12+nmu1build1_all.deb ... 932s Unpacking javascript-common (12+nmu1build1) ... 932s Selecting previously unselected package libio-string-perl. 932s Preparing to unpack .../048-libio-string-perl_1.08-4_all.deb ... 932s Unpacking libio-string-perl (1.08-4) ... 932s Selecting previously unselected package liblatex-tounicode-perl. 932s Preparing to unpack .../049-liblatex-tounicode-perl_1.93-1_all.deb ... 932s Unpacking liblatex-tounicode-perl (1.93-1) ... 932s Selecting previously unselected package libbibtex-parser-perl. 932s Preparing to unpack .../050-libbibtex-parser-perl_1.93+dfsg-1_all.deb ... 932s Unpacking libbibtex-parser-perl (1.93+dfsg-1) ... 932s Selecting previously unselected package libblas3:ppc64el. 932s Preparing to unpack .../051-libblas3_3.12.1-7ubuntu1_ppc64el.deb ... 932s Unpacking libblas3:ppc64el (3.12.1-7ubuntu1) ... 932s Selecting previously unselected package libblas-dev:ppc64el. 932s Preparing to unpack .../052-libblas-dev_3.12.1-7ubuntu1_ppc64el.deb ... 932s Unpacking libblas-dev:ppc64el (3.12.1-7ubuntu1) ... 932s Selecting previously unselected package libboost1.90-dev:ppc64el. 932s Preparing to unpack .../053-libboost1.90-dev_1.90.0-2ubuntu1_ppc64el.deb ... 932s Unpacking libboost1.90-dev:ppc64el (1.90.0-2ubuntu1) ... 935s Selecting previously unselected package libboost-dev:ppc64el. 935s Preparing to unpack .../054-libboost-dev_1.90.0.0ubuntu3_ppc64el.deb ... 935s Unpacking libboost-dev:ppc64el (1.90.0.0ubuntu3) ... 935s Selecting previously unselected package libbz2-dev:ppc64el. 935s Preparing to unpack .../055-libbz2-dev_1.0.8-6build2_ppc64el.deb ... 935s Unpacking libbz2-dev:ppc64el (1.0.8-6build2) ... 935s Selecting previously unselected package libpixman-1-0:ppc64el. 935s Preparing to unpack .../056-libpixman-1-0_0.46.4-1_ppc64el.deb ... 935s Unpacking libpixman-1-0:ppc64el (0.46.4-1) ... 935s Selecting previously unselected package libxcb-render0:ppc64el. 935s Preparing to unpack .../057-libxcb-render0_1.17.0-2ubuntu1_ppc64el.deb ... 935s Unpacking libxcb-render0:ppc64el (1.17.0-2ubuntu1) ... 935s Selecting previously unselected package libxcb-shm0:ppc64el. 935s Preparing to unpack .../058-libxcb-shm0_1.17.0-2ubuntu1_ppc64el.deb ... 935s Unpacking libxcb-shm0:ppc64el (1.17.0-2ubuntu1) ... 935s Selecting previously unselected package libxrender1:ppc64el. 935s Preparing to unpack .../059-libxrender1_1%3a0.9.12-1_ppc64el.deb ... 935s Unpacking libxrender1:ppc64el (1:0.9.12-1) ... 935s Selecting previously unselected package libcairo2:ppc64el. 935s Preparing to unpack .../060-libcairo2_1.18.4-3_ppc64el.deb ... 935s Unpacking libcairo2:ppc64el (1.18.4-3) ... 935s Selecting previously unselected package libdatrie1:ppc64el. 935s Preparing to unpack .../061-libdatrie1_0.2.14-1_ppc64el.deb ... 935s Unpacking libdatrie1:ppc64el (0.2.14-1) ... 935s Selecting previously unselected package libdeflate0:ppc64el. 935s Preparing to unpack .../062-libdeflate0_1.23-2build1_ppc64el.deb ... 935s Unpacking libdeflate0:ppc64el (1.23-2build1) ... 935s Selecting previously unselected package libdeflate-dev:ppc64el. 935s Preparing to unpack .../063-libdeflate-dev_1.23-2build1_ppc64el.deb ... 935s Unpacking libdeflate-dev:ppc64el (1.23-2build1) ... 935s Selecting previously unselected package libgraphite2-3:ppc64el. 935s Preparing to unpack .../064-libgraphite2-3_1.3.14-11ubuntu1_ppc64el.deb ... 935s Unpacking libgraphite2-3:ppc64el (1.3.14-11ubuntu1) ... 935s Selecting previously unselected package libharfbuzz0b:ppc64el. 935s Preparing to unpack .../065-libharfbuzz0b_12.3.2-1_ppc64el.deb ... 935s Unpacking libharfbuzz0b:ppc64el (12.3.2-1) ... 935s Selecting previously unselected package x11-common. 935s Preparing to unpack .../066-x11-common_1%3a7.7+24ubuntu1_all.deb ... 935s Unpacking x11-common (1:7.7+24ubuntu1) ... 935s Selecting previously unselected package libice6:ppc64el. 935s Preparing to unpack .../067-libice6_2%3a1.1.1-1build1_ppc64el.deb ... 935s Unpacking libice6:ppc64el (2:1.1.1-1build1) ... 935s Selecting previously unselected package libicu-dev:ppc64el. 935s Preparing to unpack .../068-libicu-dev_78.2-1ubuntu1_ppc64el.deb ... 935s Unpacking libicu-dev:ppc64el (78.2-1ubuntu1) ... 935s Selecting previously unselected package libjpeg-turbo8:ppc64el. 935s Preparing to unpack .../069-libjpeg-turbo8_2.1.5-4ubuntu3_ppc64el.deb ... 935s Unpacking libjpeg-turbo8:ppc64el (2.1.5-4ubuntu3) ... 935s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 935s Preparing to unpack .../070-libjpeg-turbo8-dev_2.1.5-4ubuntu3_ppc64el.deb ... 935s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-4ubuntu3) ... 935s Selecting previously unselected package libjpeg8:ppc64el. 935s Preparing to unpack .../071-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 935s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 935s Selecting previously unselected package libjpeg8-dev:ppc64el. 935s Preparing to unpack .../072-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 935s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 935s Selecting previously unselected package libjpeg-dev:ppc64el. 935s Preparing to unpack .../073-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 935s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 935s Selecting previously unselected package libjs-bootstrap. 935s Preparing to unpack .../074-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 935s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 935s Selecting previously unselected package libjs-popper.js. 935s Preparing to unpack .../075-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 935s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 935s Selecting previously unselected package libjs-bootstrap4. 935s Preparing to unpack .../076-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 935s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 935s Selecting previously unselected package libjs-d3. 935s Preparing to unpack .../077-libjs-d3_3.5.17-4build1_all.deb ... 935s Unpacking libjs-d3 (3.5.17-4build1) ... 935s Selecting previously unselected package libjs-es5-shim. 935s Preparing to unpack .../078-libjs-es5-shim_4.6.7-2_all.deb ... 935s Unpacking libjs-es5-shim (4.6.7-2) ... 935s Selecting previously unselected package libjs-highlight.js. 935s Preparing to unpack .../079-libjs-highlight.js_10.7.3+dfsg-2_all.deb ... 935s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ... 936s Selecting previously unselected package libjs-jquery. 936s Preparing to unpack .../080-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 936s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 936s Selecting previously unselected package libjs-jquery-datatables. 936s Preparing to unpack .../081-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 936s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 936s Selecting previously unselected package libjs-sifter.js. 936s Preparing to unpack .../082-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 936s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 936s Selecting previously unselected package libjs-microplugin.js. 936s Preparing to unpack .../083-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ... 936s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ... 936s Selecting previously unselected package libjs-jquery-selectize.js. 936s Preparing to unpack .../084-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 936s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 936s Selecting previously unselected package libjs-jquery-ui. 936s Preparing to unpack .../085-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 936s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 936s Selecting previously unselected package libjs-json. 936s Preparing to unpack .../086-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 936s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 936s Selecting previously unselected package libjs-lunr. 936s Preparing to unpack .../087-libjs-lunr_2.3.9~dfsg-2_all.deb ... 936s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 936s Selecting previously unselected package libjs-prettify. 936s Preparing to unpack .../088-libjs-prettify_2015.12.04+dfsg-3_all.deb ... 936s Unpacking libjs-prettify (2015.12.04+dfsg-3) ... 936s Selecting previously unselected package libkpathsea6:ppc64el. 936s Preparing to unpack .../089-libkpathsea6_2025.20250727.75242+ds-5build1_ppc64el.deb ... 936s Unpacking libkpathsea6:ppc64el (2025.20250727.75242+ds-5build1) ... 936s Selecting previously unselected package liblapack3:ppc64el. 936s Preparing to unpack .../090-liblapack3_3.12.1-7ubuntu1_ppc64el.deb ... 936s Unpacking liblapack3:ppc64el (3.12.1-7ubuntu1) ... 936s Selecting previously unselected package liblapack-dev:ppc64el. 936s Preparing to unpack .../091-liblapack-dev_3.12.1-7ubuntu1_ppc64el.deb ... 936s Unpacking liblapack-dev:ppc64el (3.12.1-7ubuntu1) ... 936s Selecting previously unselected package liblerc4:ppc64el. 936s Preparing to unpack .../092-liblerc4_4.0.0+ds-5ubuntu2_ppc64el.deb ... 936s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu2) ... 936s Selecting previously unselected package liblua5.4-0:ppc64el. 936s Preparing to unpack .../093-liblua5.4-0_5.4.8-1_ppc64el.deb ... 936s Unpacking liblua5.4-0:ppc64el (5.4.8-1) ... 936s Selecting previously unselected package libmpfi0:ppc64el. 936s Preparing to unpack .../094-libmpfi0_1.5.4+ds-4build1_ppc64el.deb ... 936s Unpacking libmpfi0:ppc64el (1.5.4+ds-4build1) ... 936s Selecting previously unselected package libncurses-dev:ppc64el. 936s Preparing to unpack .../095-libncurses-dev_6.6+20251231-1_ppc64el.deb ... 936s Unpacking libncurses-dev:ppc64el (6.6+20251231-1) ... 936s Selecting previously unselected package libthai-data. 936s Preparing to unpack .../096-libthai-data_0.1.30-1_all.deb ... 936s Unpacking libthai-data (0.1.30-1) ... 936s Selecting previously unselected package libthai0:ppc64el. 936s Preparing to unpack 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.../107-libpkgconf3_1.8.1-4build1_ppc64el.deb ... 936s Unpacking libpkgconf3:ppc64el (1.8.1-4build1) ... 936s Selecting previously unselected package zlib1g-dev:ppc64el. 936s Preparing to unpack .../108-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_ppc64el.deb ... 936s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 936s Selecting previously unselected package libpng-dev:ppc64el. 936s Preparing to unpack .../109-libpng-dev_1.6.54-1_ppc64el.deb ... 936s Unpacking libpng-dev:ppc64el (1.6.54-1) ... 936s Selecting previously unselected package libpotrace0:ppc64el. 936s Preparing to unpack .../110-libpotrace0_1.16-2build2_ppc64el.deb ... 936s Unpacking libpotrace0:ppc64el (1.16-2build2) ... 936s Selecting previously unselected package libptexenc1:ppc64el. 936s Preparing to unpack .../111-libptexenc1_2025.20250727.75242+ds-5build1_ppc64el.deb ... 936s Unpacking libptexenc1:ppc64el (2025.20250727.75242+ds-5build1) ... 936s Selecting previously unselected package libreadline-dev:ppc64el. 936s Preparing to unpack .../112-libreadline-dev_8.3-3_ppc64el.deb ... 936s Unpacking libreadline-dev:ppc64el (8.3-3) ... 936s Selecting previously unselected package libsharpyuv0:ppc64el. 936s Preparing to unpack .../113-libsharpyuv0_1.5.0-0.1build1_ppc64el.deb ... 936s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1build1) ... 936s Selecting previously unselected package libsm6:ppc64el. 936s Preparing to unpack .../114-libsm6_2%3a1.2.6-1build1_ppc64el.deb ... 936s Unpacking libsm6:ppc64el (2:1.2.6-1build1) ... 936s Selecting previously unselected package libsynctex2:ppc64el. 936s Preparing to unpack .../115-libsynctex2_2025.20250727.75242+ds-5build1_ppc64el.deb ... 936s Unpacking libsynctex2:ppc64el (2025.20250727.75242+ds-5build1) ... 936s Selecting previously unselected package libtcl8.6:ppc64el. 936s Preparing to unpack .../116-libtcl8.6_8.6.17+dfsg-1build1_ppc64el.deb ... 936s Unpacking libtcl8.6:ppc64el (8.6.17+dfsg-1build1) ... 936s Selecting previously unselected package libteckit0:ppc64el. 936s Preparing to unpack .../117-libteckit0_2.5.13+ds-1_ppc64el.deb ... 936s Unpacking libteckit0:ppc64el (2.5.13+ds-1) ... 937s Selecting previously unselected package libtexlua53-5:ppc64el. 937s Preparing to unpack .../118-libtexlua53-5_2025.20250727.75242+ds-5build1_ppc64el.deb ... 937s Unpacking libtexlua53-5:ppc64el (2025.20250727.75242+ds-5build1) ... 937s Selecting previously unselected package libjbig0:ppc64el. 937s Preparing to unpack .../119-libjbig0_2.1-6.1ubuntu3_ppc64el.deb ... 937s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu3) ... 937s Selecting previously unselected package libwebp7:ppc64el. 937s Preparing to unpack .../120-libwebp7_1.5.0-0.1build1_ppc64el.deb ... 937s Unpacking libwebp7:ppc64el (1.5.0-0.1build1) ... 937s Selecting previously unselected package libtiff6:ppc64el. 937s Preparing to unpack .../121-libtiff6_4.7.0-3ubuntu3_ppc64el.deb ... 937s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu3) ... 937s Selecting previously unselected package libxft2:ppc64el. 937s Preparing to unpack .../122-libxft2_2.3.6-1build2_ppc64el.deb ... 937s Unpacking libxft2:ppc64el (2.3.6-1build2) ... 937s Selecting previously unselected package libxss1:ppc64el. 937s Preparing to unpack .../123-libxss1_1%3a1.2.3-1build4_ppc64el.deb ... 937s Unpacking libxss1:ppc64el (1:1.2.3-1build4) ... 937s Selecting previously unselected package libtk8.6:ppc64el. 937s Preparing to unpack .../124-libtk8.6_8.6.17-1_ppc64el.deb ... 937s Unpacking libtk8.6:ppc64el (8.6.17-1) ... 937s Selecting previously unselected package libxt6t64:ppc64el. 937s Preparing to unpack .../125-libxt6t64_1%3a1.2.1-1.3_ppc64el.deb ... 937s Unpacking libxt6t64:ppc64el (1:1.2.1-1.3) ... 937s Selecting previously unselected package libxmu6:ppc64el. 937s Preparing to unpack .../126-libxmu6_2%3a1.1.3-4_ppc64el.deb ... 937s Unpacking libxmu6:ppc64el (2:1.1.3-4) ... 937s Selecting previously unselected package libxpm4:ppc64el. 937s Preparing to unpack .../127-libxpm4_1%3a3.5.17-1build3_ppc64el.deb ... 937s Unpacking libxpm4:ppc64el (1:3.5.17-1build3) ... 937s Selecting previously unselected package libxaw7:ppc64el. 937s Preparing to unpack .../128-libxaw7_2%3a1.0.16-1build1_ppc64el.deb ... 937s Unpacking libxaw7:ppc64el (2:1.0.16-1build1) ... 937s Selecting previously unselected package libxi6:ppc64el. 937s Preparing to unpack .../129-libxi6_2%3a1.8.2-2_ppc64el.deb ... 937s Unpacking libxi6:ppc64el (2:1.8.2-2) ... 937s Selecting previously unselected package libzstd-dev:ppc64el. 937s Preparing to unpack .../130-libzstd-dev_1.5.7+dfsg-3_ppc64el.deb ... 937s Unpacking libzstd-dev:ppc64el (1.5.7+dfsg-3) ... 937s Selecting previously unselected package libzzip-0-13t64:ppc64el. 937s Preparing to unpack .../131-libzzip-0-13t64_0.13.78+dfsg.1-0.2_ppc64el.deb ... 937s Unpacking libzzip-0-13t64:ppc64el (0.13.78+dfsg.1-0.2) ... 937s Selecting previously unselected package node-bootstrap-sass. 937s Preparing to unpack .../132-node-bootstrap-sass_3.4.3-2_all.deb ... 937s Unpacking node-bootstrap-sass (3.4.3-2) ... 937s Selecting previously unselected package node-html5shiv. 937s Preparing to unpack .../133-node-html5shiv_3.7.3+dfsg-5_all.deb ... 937s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 937s Selecting previously unselected package node-normalize.css. 937s Preparing to unpack .../134-node-normalize.css_8.0.1-5.1_all.deb ... 937s Unpacking node-normalize.css (8.0.1-5.1) ... 937s Selecting previously unselected package pandoc-data. 937s Preparing to unpack .../135-pandoc-data_3.1.11.1-3build1_all.deb ... 937s Unpacking pandoc-data (3.1.11.1-3build1) ... 937s Selecting previously unselected package pandoc. 937s Preparing to unpack .../136-pandoc_3.1.11.1+ds-4_ppc64el.deb ... 937s Unpacking pandoc (3.1.11.1+ds-4) ... 938s Selecting previously unselected package zip. 938s Preparing to unpack .../137-zip_3.0-15ubuntu3_ppc64el.deb ... 938s Unpacking zip (3.0-15ubuntu3) ... 938s Selecting previously unselected package unzip. 938s Preparing to unpack .../138-unzip_6.0-29ubuntu1_ppc64el.deb ... 938s Unpacking unzip (6.0-29ubuntu1) ... 938s Selecting previously unselected package xdg-utils. 938s Preparing to unpack .../139-xdg-utils_1.2.1-2ubuntu2_all.deb ... 938s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 938s Selecting previously unselected package r-base-core. 938s Preparing to unpack .../140-r-base-core_4.5.2-1ubuntu2_ppc64el.deb ... 938s Unpacking r-base-core (4.5.2-1ubuntu2) ... 939s Selecting previously unselected package liblzma-dev:ppc64el. 939s Preparing to unpack .../141-liblzma-dev_5.8.2-2_ppc64el.deb ... 939s Unpacking liblzma-dev:ppc64el (5.8.2-2) ... 939s Selecting previously unselected package pkgconf-bin. 939s Preparing to unpack .../142-pkgconf-bin_1.8.1-4build1_ppc64el.deb ... 939s Unpacking pkgconf-bin (1.8.1-4build1) ... 939s Selecting previously unselected package pkgconf:ppc64el. 939s Preparing to unpack .../143-pkgconf_1.8.1-4build1_ppc64el.deb ... 939s Unpacking pkgconf:ppc64el (1.8.1-4build1) ... 939s Selecting previously unselected package libtirpc-dev:ppc64el. 939s Preparing to unpack .../144-libtirpc-dev_1.3.6+ds-1_ppc64el.deb ... 939s Unpacking libtirpc-dev:ppc64el (1.3.6+ds-1) ... 939s Selecting previously unselected package r-base-dev. 939s Preparing to unpack .../145-r-base-dev_4.5.2-1ubuntu2_all.deb ... 939s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 939s Selecting previously unselected package pkg-r-autopkgtest. 939s Preparing to unpack .../146-pkg-r-autopkgtest_20250812_all.deb ... 939s Unpacking pkg-r-autopkgtest (20250812) ... 939s Selecting previously unselected package r-bioc-biocgenerics. 939s Preparing to unpack .../147-r-bioc-biocgenerics_0.52.0-2_all.deb ... 939s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 939s Selecting previously unselected package r-bioc-biobase. 939s Preparing to unpack .../148-r-bioc-biobase_2.66.0-2_ppc64el.deb ... 939s Unpacking r-bioc-biobase (2.66.0-2) ... 939s Selecting previously unselected package r-bioc-s4vectors. 939s Preparing to unpack .../149-r-bioc-s4vectors_0.44.0+dfsg-2_ppc64el.deb ... 939s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 939s Selecting previously unselected package r-bioc-iranges. 939s Preparing to unpack .../150-r-bioc-iranges_2.40.1-3_ppc64el.deb ... 939s Unpacking r-bioc-iranges (2.40.1-3) ... 939s Selecting previously unselected package r-cran-dbi. 939s Preparing to unpack .../151-r-cran-dbi_1.2.3-1build1_all.deb ... 939s Unpacking r-cran-dbi (1.2.3-1build1) ... 939s Selecting previously unselected package r-cran-bit. 939s Preparing to unpack .../152-r-cran-bit_4.6.0+dfsg-1_ppc64el.deb ... 939s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 939s Selecting previously unselected package r-cran-bit64. 939s Preparing to unpack .../153-r-cran-bit64_4.6.0-1-4_ppc64el.deb ... 939s Unpacking r-cran-bit64 (4.6.0-1-4) ... 939s Selecting previously unselected package r-cran-rlang. 939s Preparing to unpack .../154-r-cran-rlang_1.1.5-3_ppc64el.deb ... 939s Unpacking r-cran-rlang (1.1.5-3) ... 939s Selecting previously unselected package r-cran-cli. 939s Preparing to unpack .../155-r-cran-cli_3.6.4-1_ppc64el.deb ... 939s Unpacking r-cran-cli (3.6.4-1) ... 939s Selecting previously unselected package r-cran-glue. 939s Preparing to unpack .../156-r-cran-glue_1.8.0-1_ppc64el.deb ... 939s Unpacking r-cran-glue (1.8.0-1) ... 939s Selecting previously unselected package r-cran-lifecycle. 939s Preparing to unpack .../157-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 939s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 939s Selecting previously unselected package r-cran-vctrs. 939s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 939s Unpacking r-cran-vctrs (0.6.5-1) ... 939s Selecting previously unselected package r-cran-blob. 939s Preparing to unpack .../159-r-cran-blob_1.3.0-1_all.deb ... 939s Unpacking r-cran-blob (1.3.0-1) ... 939s Selecting previously unselected package r-cran-fastmap. 939s Preparing to unpack .../160-r-cran-fastmap_1.2.0-1_ppc64el.deb ... 939s Unpacking r-cran-fastmap (1.2.0-1) ... 939s Selecting previously unselected package r-cran-cachem. 939s Preparing to unpack .../161-r-cran-cachem_1.1.0-1_ppc64el.deb ... 939s Unpacking r-cran-cachem (1.1.0-1) ... 939s Selecting previously unselected package r-cran-memoise. 939s Preparing to unpack .../162-r-cran-memoise_2.0.1-1build1_all.deb ... 939s Unpacking r-cran-memoise (2.0.1-1build1) ... 939s Selecting previously unselected package r-cran-pkgconfig. 939s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 939s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 939s Selecting previously unselected package r-cran-plogr. 939s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build2_all.deb ... 939s Unpacking r-cran-plogr (0.2.0-3build2) ... 939s Selecting previously unselected package r-cran-cpp11. 939s Preparing to unpack .../165-r-cran-cpp11_0.5.3-1_all.deb ... 939s Unpacking r-cran-cpp11 (0.5.3-1) ... 939s Selecting previously unselected package r-cran-rsqlite. 939s Preparing to unpack .../166-r-cran-rsqlite_2.3.9-1_ppc64el.deb ... 939s Unpacking r-cran-rsqlite (2.3.9-1) ... 939s Selecting previously unselected package r-cran-curl. 939s Preparing to unpack .../167-r-cran-curl_7.0.0+dfsg-1_ppc64el.deb ... 939s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 940s Selecting previously unselected package r-cran-jsonlite. 940s Preparing to unpack .../168-r-cran-jsonlite_1.9.1+dfsg-1_ppc64el.deb ... 940s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 940s Selecting previously unselected package r-cran-mime. 940s Preparing to unpack .../169-r-cran-mime_0.12-2_ppc64el.deb ... 940s Unpacking r-cran-mime (0.12-2) ... 940s Selecting previously unselected package r-cran-sys. 940s Preparing to unpack .../170-r-cran-sys_3.4.3-1_ppc64el.deb ... 940s Unpacking r-cran-sys (3.4.3-1) ... 940s Selecting previously unselected package r-cran-askpass. 940s Preparing to unpack .../171-r-cran-askpass_1.2.1-1_ppc64el.deb ... 940s Unpacking r-cran-askpass (1.2.1-1) ... 940s Selecting previously unselected package r-cran-openssl. 940s Preparing to unpack .../172-r-cran-openssl_2.3.2+dfsg-1_ppc64el.deb ... 940s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 940s Selecting previously unselected package r-cran-r6. 940s Preparing to unpack .../173-r-cran-r6_2.6.1-1_all.deb ... 940s Unpacking r-cran-r6 (2.6.1-1) ... 940s Selecting previously unselected package r-cran-httr. 940s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 940s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 940s Selecting previously unselected package r-cran-png. 940s Preparing to unpack .../175-r-cran-png_0.1-8-1build2_ppc64el.deb ... 940s Unpacking r-cran-png (0.1-8-1build2) ... 940s Selecting previously unselected package r-bioc-zlibbioc. 940s Preparing to unpack .../176-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 940s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 940s Selecting previously unselected package r-bioc-xvector. 940s Preparing to unpack .../177-r-bioc-xvector_0.46.0-2_ppc64el.deb ... 940s Unpacking r-bioc-xvector (0.46.0-2) ... 940s Selecting previously unselected package r-bioc-ucsc.utils. 940s Preparing to unpack .../178-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 940s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 940s Selecting previously unselected package r-bioc-genomeinfodbdata. 940s Preparing to unpack .../179-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 940s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 940s Selecting previously unselected package r-bioc-genomeinfodb. 940s Preparing to unpack .../180-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 940s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 940s Selecting previously unselected package r-cran-crayon. 940s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ... 940s Unpacking r-cran-crayon (1.5.3-1) ... 940s Selecting previously unselected package r-bioc-biostrings. 940s Preparing to unpack .../182-r-bioc-biostrings_2.74.1+dfsg-2_ppc64el.deb ... 940s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 940s Selecting previously unselected package r-bioc-keggrest. 940s Preparing to unpack .../183-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 940s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 940s Selecting previously unselected package r-bioc-annotationdbi. 940s Preparing to unpack .../184-r-bioc-annotationdbi_1.68.0-2_all.deb ... 940s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 940s Selecting previously unselected package r-cran-generics. 940s Preparing to unpack .../185-r-cran-generics_0.1.4-1_all.deb ... 940s Unpacking r-cran-generics (0.1.4-1) ... 940s Selecting previously unselected package r-cran-magrittr. 940s Preparing to unpack .../186-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 940s Unpacking r-cran-magrittr (2.0.3-1) ... 940s Selecting previously unselected package r-cran-utf8. 940s Preparing to unpack .../187-r-cran-utf8_1.2.4-1_ppc64el.deb ... 940s Unpacking r-cran-utf8 (1.2.4-1) ... 940s Selecting previously unselected package r-cran-pillar. 940s Preparing to unpack .../188-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 940s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 940s Selecting previously unselected package r-cran-fansi. 940s Preparing to unpack .../189-r-cran-fansi_1.0.6-2_ppc64el.deb ... 940s Unpacking r-cran-fansi (1.0.6-2) ... 940s Selecting previously unselected package r-cran-tibble. 940s Preparing to unpack .../190-r-cran-tibble_3.2.1+dfsg-3_ppc64el.deb ... 940s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 940s Selecting previously unselected package r-cran-withr. 940s Preparing to unpack .../191-r-cran-withr_3.0.2+dfsg-1_all.deb ... 940s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 940s Selecting previously unselected package r-cran-tidyselect. 940s Preparing to unpack .../192-r-cran-tidyselect_1.2.1+dfsg-1_ppc64el.deb ... 940s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 940s Selecting previously unselected package r-cran-dplyr. 940s Preparing to unpack .../193-r-cran-dplyr_1.1.4-4_ppc64el.deb ... 940s Unpacking r-cran-dplyr (1.1.4-4) ... 941s Selecting previously unselected package r-cran-purrr. 941s Preparing to unpack .../194-r-cran-purrr_1.0.4-1_ppc64el.deb ... 941s Unpacking r-cran-purrr (1.0.4-1) ... 941s Selecting previously unselected package r-cran-stringi. 941s Preparing to unpack .../195-r-cran-stringi_1.8.4-1build2_ppc64el.deb ... 941s Unpacking r-cran-stringi (1.8.4-1build2) ... 941s Selecting previously unselected package r-cran-stringr. 941s Preparing to unpack .../196-r-cran-stringr_1.5.1-1_all.deb ... 941s Unpacking r-cran-stringr (1.5.1-1) ... 941s Selecting previously unselected package r-cran-tidyr. 941s Preparing to unpack .../197-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 941s Unpacking r-cran-tidyr (1.3.1-1) ... 941s Selecting previously unselected package r-cran-dbplyr. 941s Preparing to unpack .../198-r-cran-dbplyr_2.5.1+dfsg-1_all.deb ... 941s Unpacking r-cran-dbplyr (2.5.1+dfsg-1) ... 941s Selecting previously unselected package r-cran-filelock. 941s Preparing to unpack .../199-r-cran-filelock_1.0.3-1_ppc64el.deb ... 941s Unpacking r-cran-filelock (1.0.3-1) ... 941s Selecting previously unselected package r-bioc-biocfilecache. 941s Preparing to unpack .../200-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 941s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 941s Selecting previously unselected package r-bioc-biocio. 941s Preparing to unpack .../201-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 941s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 941s Selecting previously unselected package r-cran-formatr. 941s Preparing to unpack .../202-r-cran-formatr_1.14-2_all.deb ... 941s Unpacking r-cran-formatr (1.14-2) ... 941s Selecting previously unselected package r-cran-lambda.r. 941s Preparing to unpack .../203-r-cran-lambda.r_1.2.4-2build2_all.deb ... 941s Unpacking r-cran-lambda.r (1.2.4-2build2) ... 941s Selecting previously unselected package r-cran-futile.options. 941s Preparing to unpack .../204-r-cran-futile.options_1.0.1-3build2_all.deb ... 941s Unpacking r-cran-futile.options (1.0.1-3build2) ... 941s Selecting previously unselected package r-cran-futile.logger. 941s Preparing to unpack .../205-r-cran-futile.logger_1.4.3-4build2_all.deb ... 941s Unpacking r-cran-futile.logger (1.4.3-4build2) ... 941s Selecting previously unselected package r-cran-snow. 941s Preparing to unpack .../206-r-cran-snow_1%3a0.4.4-2build1_all.deb ... 941s Unpacking r-cran-snow (1:0.4.4-2build1) ... 941s Selecting previously unselected package r-cran-codetools. 941s Preparing to unpack .../207-r-cran-codetools_0.2-20-1build1_all.deb ... 941s Unpacking r-cran-codetools (0.2-20-1build1) ... 941s Selecting previously unselected package r-cran-bh. 941s Preparing to unpack .../208-r-cran-bh_1.84.0-1_all.deb ... 941s Unpacking r-cran-bh (1.84.0-1) ... 941s Selecting previously unselected package r-bioc-biocparallel. 941s Preparing to unpack .../209-r-bioc-biocparallel_1.40.0-2_ppc64el.deb ... 941s Unpacking r-bioc-biocparallel (1.40.0-2) ... 941s Selecting previously unselected package r-cran-base64enc. 941s Preparing to unpack .../210-r-cran-base64enc_0.1-3-3build1_ppc64el.deb ... 941s Unpacking r-cran-base64enc (0.1-3-3build1) ... 941s Selecting previously unselected package r-cran-digest. 941s Preparing to unpack .../211-r-cran-digest_0.6.39-1_ppc64el.deb ... 941s Unpacking r-cran-digest (0.6.39-1) ... 941s Selecting previously unselected package r-cran-htmltools. 941s Preparing to unpack .../212-r-cran-htmltools_0.5.8.1-1_ppc64el.deb ... 941s Unpacking r-cran-htmltools (0.5.8.1-1) ... 941s Selecting previously unselected package r-cran-evaluate. 941s Preparing to unpack .../213-r-cran-evaluate_1.0.5-1_all.deb ... 941s Unpacking r-cran-evaluate (1.0.5-1) ... 941s Selecting previously unselected package r-cran-xfun. 941s Preparing to unpack .../214-r-cran-xfun_0.55+dfsg-1_ppc64el.deb ... 941s Unpacking r-cran-xfun (0.55+dfsg-1) ... 941s Selecting previously unselected package r-cran-highr. 941s Preparing to unpack .../215-r-cran-highr_0.11+dfsg-1_all.deb ... 941s Unpacking r-cran-highr (0.11+dfsg-1) ... 941s Selecting previously unselected package r-cran-yaml. 941s Preparing to unpack .../216-r-cran-yaml_2.3.10-1_ppc64el.deb ... 941s Unpacking r-cran-yaml (2.3.10-1) ... 941s Selecting previously unselected package libjs-mathjax. 941s Preparing to unpack .../217-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 941s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 941s Selecting previously unselected package r-cran-knitr. 941s Preparing to unpack .../218-r-cran-knitr_1.51+dfsg-1_all.deb ... 941s Unpacking r-cran-knitr (1.51+dfsg-1) ... 941s Selecting previously unselected package r-cran-jquerylib. 941s Preparing to unpack .../219-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 941s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 942s Selecting previously unselected package r-cran-fs. 942s Preparing to unpack .../220-r-cran-fs_1.6.5+dfsg-1_ppc64el.deb ... 942s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 942s Selecting previously unselected package r-cran-rappdirs. 942s Preparing to unpack .../221-r-cran-rappdirs_0.3.3-1build1_ppc64el.deb ... 942s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 942s Selecting previously unselected package r-cran-sass. 942s Preparing to unpack .../222-r-cran-sass_0.4.9+dfsg-1_ppc64el.deb ... 942s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 942s Selecting previously unselected package r-cran-bslib. 942s Preparing to unpack .../223-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 942s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 942s Selecting previously unselected package r-cran-fontawesome. 942s Preparing to unpack .../224-r-cran-fontawesome_0.5.3-1_all.deb ... 942s Unpacking r-cran-fontawesome (0.5.3-1) ... 942s Selecting previously unselected package r-cran-tinytex. 942s Preparing to unpack .../225-r-cran-tinytex_0.58-1_all.deb ... 942s Unpacking r-cran-tinytex (0.58-1) ... 942s Selecting previously unselected package libjs-modernizr. 942s Preparing to unpack .../226-libjs-modernizr_3.13.0-0.1build1_all.deb ... 942s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 942s Selecting previously unselected package r-cran-littler. 942s Preparing to unpack .../227-r-cran-littler_0.3.22-1_ppc64el.deb ... 942s Unpacking r-cran-littler (0.3.22-1) ... 942s Selecting previously unselected package r-cran-pkgkitten. 942s Preparing to unpack .../228-r-cran-pkgkitten_0.2.4-1_all.deb ... 942s Unpacking r-cran-pkgkitten (0.2.4-1) ... 942s Selecting previously unselected package r-cran-rcpp. 942s Preparing to unpack .../229-r-cran-rcpp_1.1.0-1_ppc64el.deb ... 942s Unpacking r-cran-rcpp (1.1.0-1) ... 942s Selecting previously unselected package r-cran-later. 942s Preparing to unpack .../230-r-cran-later_1.4.1+dfsg-1_ppc64el.deb ... 942s Unpacking r-cran-later (1.4.1+dfsg-1) ... 942s Selecting previously unselected package r-cran-promises. 942s Preparing to unpack .../231-r-cran-promises_1.3.2+dfsg-1_ppc64el.deb ... 942s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 942s Selecting previously unselected package r-cran-httpuv. 942s Preparing to unpack .../232-r-cran-httpuv_1.6.15+dfsg-1_ppc64el.deb ... 942s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 942s Selecting previously unselected package r-cran-xtable. 942s Preparing to unpack .../233-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 942s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 942s Selecting previously unselected package r-cran-sourcetools. 942s Preparing to unpack .../234-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 942s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 942s Selecting previously unselected package r-cran-commonmark. 942s Preparing to unpack .../235-r-cran-commonmark_1.9.5-1_ppc64el.deb ... 942s Unpacking r-cran-commonmark (1.9.5-1) ... 942s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 942s Preparing to unpack .../236-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 942s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 942s Selecting previously unselected package r-cran-shiny. 942s Preparing to unpack .../237-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 942s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 942s Selecting previously unselected package r-cran-rmarkdown. 942s Preparing to unpack .../238-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 942s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 942s Selecting previously unselected package r-cran-bookdown. 942s Preparing to unpack .../239-r-cran-bookdown_0.42+dfsg-1_all.deb ... 942s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 942s Selecting previously unselected package r-cran-biocmanager. 942s Preparing to unpack .../240-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 942s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 942s Selecting previously unselected package tex-common. 942s Preparing to unpack .../241-tex-common_6.20_all.deb ... 942s Unpacking tex-common (6.20) ... 943s Selecting previously unselected package t1utils. 943s Preparing to unpack .../242-t1utils_1.41-4build4_ppc64el.deb ... 943s Unpacking t1utils (1.41-4build4) ... 943s Selecting previously unselected package texlive-binaries. 943s Preparing to unpack .../243-texlive-binaries_2025.20250727.75242+ds-5build1_ppc64el.deb ... 943s Unpacking texlive-binaries (2025.20250727.75242+ds-5build1) ... 943s Selecting previously unselected package texlive-base. 943s Preparing to unpack .../244-texlive-base_2025.20260124-1_all.deb ... 943s Unpacking texlive-base (2025.20260124-1) ... 944s Selecting previously unselected package texlive-latex-base. 944s Preparing to unpack .../245-texlive-latex-base_2025.20260124-1_all.deb ... 944s Unpacking texlive-latex-base (2025.20260124-1) ... 944s Selecting previously unselected package texlive-bibtex-extra. 944s Preparing to unpack .../246-texlive-bibtex-extra_2025.20260124-1_all.deb ... 944s Unpacking texlive-bibtex-extra (2025.20260124-1) ... 948s Selecting previously unselected package r-bioc-biocversion. 948s Preparing to unpack .../247-r-bioc-biocversion_3.20.0-2_all.deb ... 948s Unpacking r-bioc-biocversion (3.20.0-2) ... 948s Selecting previously unselected package r-bioc-biocstyle. 948s Preparing to unpack .../248-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 948s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 948s Selecting previously unselected package r-cran-hms. 948s Preparing to unpack .../249-r-cran-hms_1.1.4-1_all.deb ... 948s Unpacking r-cran-hms (1.1.4-1) ... 948s Selecting previously unselected package r-cran-prettyunits. 948s Preparing to unpack .../250-r-cran-prettyunits_1.2.0-1_all.deb ... 948s Unpacking r-cran-prettyunits (1.2.0-1) ... 948s Selecting previously unselected package r-cran-progress. 948s Preparing to unpack .../251-r-cran-progress_1.2.3-1_all.deb ... 948s Unpacking r-cran-progress (1.2.3-1) ... 948s Selecting previously unselected package r-cran-httr2. 948s Preparing to unpack .../252-r-cran-httr2_1.1.1-2_all.deb ... 948s Unpacking r-cran-httr2 (1.1.1-2) ... 948s Selecting previously unselected package r-cran-xml2. 948s Preparing to unpack .../253-r-cran-xml2_1.4.1-1_ppc64el.deb ... 948s Unpacking r-cran-xml2 (1.4.1-1) ... 948s Selecting previously unselected package r-bioc-biomart. 948s Preparing to unpack .../254-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 948s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 948s Selecting previously unselected package r-cran-lattice. 948s Preparing to unpack .../255-r-cran-lattice_0.22-9-1_ppc64el.deb ... 948s Unpacking r-cran-lattice (0.22-9-1) ... 948s Selecting previously unselected package r-cran-matrix. 948s Preparing to unpack .../256-r-cran-matrix_1.7-4-1_ppc64el.deb ... 948s Unpacking r-cran-matrix (1.7-4-1) ... 948s Selecting previously unselected package r-cran-matrixstats. 948s Preparing to unpack .../257-r-cran-matrixstats_1.5.0-1_ppc64el.deb ... 948s Unpacking r-cran-matrixstats (1.5.0-1) ... 948s Selecting previously unselected package r-bioc-matrixgenerics. 948s Preparing to unpack .../258-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 948s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 948s Selecting previously unselected package r-cran-abind. 948s Preparing to unpack .../259-r-cran-abind_1.4-8-1build1_all.deb ... 948s Unpacking r-cran-abind (1.4-8-1build1) ... 948s Selecting previously unselected package r-bioc-s4arrays. 948s Preparing to unpack .../260-r-bioc-s4arrays_1.6.0+dfsg-2_ppc64el.deb ... 948s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 948s Selecting previously unselected package r-bioc-sparsearray. 948s Preparing to unpack .../261-r-bioc-sparsearray_1.6.2+dfsg-2_ppc64el.deb ... 948s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 948s Selecting previously unselected package r-bioc-delayedarray. 948s Preparing to unpack .../262-r-bioc-delayedarray_0.32.0+dfsg-2_ppc64el.deb ... 948s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 948s Selecting previously unselected package r-bioc-genomicranges. 948s Preparing to unpack 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955s Setting up r-cran-bh (1.84.0-1) ... 955s Setting up r-cran-fs (1.6.5+dfsg-1) ... 955s Setting up r-cran-rcpp (1.1.0-1) ... 955s Setting up r-cran-curl (7.0.0+dfsg-1) ... 955s Setting up r-cran-codetools (0.2-20-1build1) ... 955s Setting up r-bioc-biocgenerics (0.52.0-2) ... 955s Setting up r-cran-rlang (1.1.5-3) ... 955s Setting up r-cran-matrixstats (1.5.0-1) ... 955s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 955s Setting up r-cran-xfun (0.55+dfsg-1) ... 955s Setting up r-cran-sys (3.4.3-1) ... 955s Setting up r-cran-plogr (0.2.0-3build2) ... 955s Setting up r-cran-withr (3.0.2+dfsg-1) ... 955s Setting up r-cran-mime (0.12-2) ... 955s Setting up r-cran-generics (0.1.4-1) ... 955s Setting up r-cran-base64enc (0.1-3-3build1) ... 955s Setting up r-cran-abind (1.4-8-1build1) ... 955s Setting up r-cran-digest (0.6.39-1) ... 955s Setting up r-cran-yaml (2.3.10-1) ... 955s Setting up r-cran-lambda.r (1.2.4-2build2) ... 955s Setting up r-cran-evaluate (1.0.5-1) ... 955s Setting up 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group f77) doesn't exist 955s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ... 955s Setting up r-cran-bitops (1.0-9-1) ... 955s Setting up r-bioc-biocversion (3.20.0-2) ... 955s Setting up r-cran-bit64 (4.6.0-1-4) ... 955s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 955s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 955s Setting up r-cran-deldir (2.0-4-1build1) ... 955s Setting up r-cran-askpass (1.2.1-1) ... 955s Setting up r-cran-fastmap (1.2.0-1) ... 955s Setting up r-cran-png (0.1-8-1build2) ... 955s Setting up r-bioc-biobase (2.66.0-2) ... 955s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 955s Setting up r-cran-pkgconfig (2.0.3-2build2) ... 955s Setting up r-cran-utf8 (1.2.4-1) ... 955s Setting up r-cran-stringi (1.8.4-1build2) ... 955s Setting up texlive-latex-base (2025.20260124-1) ... 955s Setting up r-cran-hwriter (1.3.2.1-1) ... 955s Setting up r-cran-cpp11 (0.5.3-1) ... 955s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ... 955s Setting up r-bioc-s4vectors 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(4.5.2-1ubuntu2) ... 955s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 955s Setting up r-cran-stringr (1.5.1-1) ... 955s Setting up r-bioc-biocparallel (1.40.0-2) ... 955s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 955s Setting up r-cran-xml2 (1.4.1-1) ... 955s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 955s Setting up r-cran-fontawesome (0.5.3-1) ... 955s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 955s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ... 955s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 955s Setting up texlive-bibtex-extra (2025.20260124-1) ... 955s Setting up r-cran-interp (1.1-6-1) ... 955s Setting up r-cran-httr2 (1.1.1-2) ... 955s Setting up r-cran-httr (1.4.7+dfsg-1) ... 955s Setting up r-cran-hms (1.1.4-1) ... 955s Setting up r-cran-memoise (2.0.1-1build1) ... 955s Setting up r-cran-promises (1.3.2+dfsg-1) ... 955s Setting up r-cran-purrr (1.0.4-1) ... 955s Setting up r-cran-blob (1.3.0-1) ... 955s Setting up pkg-r-autopkgtest (20250812) ... 955s Setting up r-bioc-xvector (0.46.0-2) ... 955s Setting up r-cran-dplyr (1.1.4-4) ... 955s Setting up r-cran-rsqlite (2.3.9-1) ... 955s Setting up r-cran-progress (1.2.3-1) ... 955s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 955s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 955s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 955s Setting up r-cran-latticeextra (0.6-31-1) ... 955s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 955s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 955s Setting up r-cran-tidyr (1.3.1-1) ... 955s Setting up r-cran-dbplyr (2.5.1+dfsg-1) ... 955s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 955s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 955s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 955s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 955s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 955s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 955s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 955s Setting up r-cran-bookdown (0.42+dfsg-1) ... 955s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 955s Setting up r-bioc-pwalign (1.2.0-3) ... 955s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 955s Setting up r-bioc-annotationdbi (1.68.0-2) ... 955s Setting up r-bioc-biomart (2.62.1+dfsg-1) ... 955s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 955s Setting up r-bioc-genomicalignments (1.42.0-2) ... 955s Setting up r-bioc-rtracklayer (1.66.0-3) ... 955s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 955s Setting up r-bioc-shortread (1.64.0-3) ... 955s Processing triggers for libc-bin (2.42-2ubuntu4) ... 955s Processing triggers for man-db (2.13.1-1build1) ... 959s Processing triggers for install-info (7.2-5) ... 959s Processing triggers for tex-common (6.20) ... 960s Running updmap-sys. This may take some time... done. 960s Running mktexlsr /var/lib/texmf ... done. 960s Building format(s) --all. 995s This may take some time... done. 996s autopkgtest [22:57:21]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 996s autopkgtest [22:57:21]: test pkg-r-autopkgtest: [----------------------- 996s Test: Try to load the R library ShortRead 996s 996s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 996s Copyright (C) 2025 The R Foundation for Statistical Computing 996s Platform: powerpc64le-unknown-linux-gnu 996s 996s R is free software and comes with ABSOLUTELY NO WARRANTY. 996s You are welcome to redistribute it under certain conditions. 996s Type 'license()' or 'licence()' for distribution details. 996s 996s R is a collaborative project with many contributors. 996s Type 'contributors()' for more information and 996s 'citation()' on how to cite R or R packages in publications. 996s 996s Type 'demo()' for some demos, 'help()' for on-line help, or 996s 'help.start()' for an HTML browser interface to help. 996s Type 'q()' to quit R. 996s 996s > library('ShortRead') 996s Loading required package: BiocGenerics 996s 996s Attaching package: ‘BiocGenerics’ 996s 996s The following objects are masked from ‘package:stats’: 996s 996s IQR, mad, sd, var, xtabs 996s 996s The following objects are masked from ‘package:base’: 996s 996s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 996s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 996s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 996s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 996s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 996s table, tapply, union, unique, unsplit, which.max, which.min 996s 996s Loading required package: BiocParallel 996s Loading required package: Biostrings 996s Loading required package: S4Vectors 996s Loading required package: stats4 997s 997s Attaching package: ‘S4Vectors’ 997s 997s The following object is masked from ‘package:utils’: 997s 997s findMatches 997s 997s The following objects are masked from ‘package:base’: 997s 997s expand.grid, I, unname 997s 997s Loading required package: IRanges 998s Loading required package: XVector 998s Loading required package: GenomeInfoDb 998s 998s Attaching package: ‘Biostrings’ 998s 998s The following object is masked from ‘package:base’: 998s 998s strsplit 998s 998s Loading required package: Rsamtools 998s Loading required package: GenomicRanges 999s Loading required package: GenomicAlignments 999s Loading required package: SummarizedExperiment 999s Loading required package: MatrixGenerics 999s Loading required package: matrixStats 999s 999s Attaching package: ‘MatrixGenerics’ 999s 999s The following objects are masked from ‘package:matrixStats’: 999s 999s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 999s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 999s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 999s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 999s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 999s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 999s colWeightedMeans, colWeightedMedians, colWeightedSds, 999s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 999s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 999s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 999s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 999s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 999s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 999s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 999s rowWeightedSds, rowWeightedVars 999s 999s Loading required package: Biobase 999s Welcome to Bioconductor 999s 999s Vignettes contain introductory material; view with 999s 'browseVignettes()'. To cite Bioconductor, see 999s 'citation("Biobase")', and for packages 'citation("pkgname")'. 999s 999s 999s Attaching package: ‘Biobase’ 999s 999s The following object is masked from ‘package:MatrixGenerics’: 999s 999s rowMedians 999s 999s The following objects are masked from ‘package:matrixStats’: 999s 999s anyMissing, rowMedians 999s 1004s > 1004s Test: Run tests for ShortRead 1004s Start: ShortRead_unit_tests.R 1004s 1004s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 1004s Copyright (C) 2025 The R Foundation for Statistical Computing 1004s Platform: powerpc64le-unknown-linux-gnu 1004s 1004s R is free software and comes with ABSOLUTELY NO WARRANTY. 1004s You are welcome to redistribute it under certain conditions. 1004s Type 'license()' or 'licence()' for distribution details. 1004s 1004s R is a collaborative project with many contributors. 1004s Type 'contributors()' for more information and 1004s 'citation()' on how to cite R or R packages in publications. 1004s 1004s Type 'demo()' for some demos, 'help()' for on-line help, or 1004s 'help.start()' for an HTML browser interface to help. 1004s Type 'q()' to quit R. 1004s 1004s > BiocGenerics:::testPackage("ShortRead") 1004s 1004s Attaching package: ‘BiocGenerics’ 1004s 1004s The following objects are masked from ‘package:stats’: 1004s 1004s IQR, mad, sd, var, xtabs 1004s 1004s The following objects are masked from ‘package:base’: 1004s 1004s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 1004s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 1004s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 1004s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 1004s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 1004s table, tapply, union, unique, unsplit, which.max, which.min 1004s 1005s 1005s Attaching package: ‘S4Vectors’ 1005s 1005s The following object is masked from ‘package:utils’: 1005s 1005s findMatches 1005s 1005s The following objects are masked from ‘package:base’: 1005s 1005s expand.grid, I, unname 1005s 1007s 1007s Attaching package: ‘Biostrings’ 1007s 1007s The following object is masked from ‘package:base’: 1007s 1007s strsplit 1007s 1007s 1007s Attaching package: ‘MatrixGenerics’ 1007s 1007s The following objects are masked from ‘package:matrixStats’: 1007s 1007s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 1007s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 1007s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 1007s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 1007s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 1007s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 1007s colWeightedMeans, colWeightedMedians, colWeightedSds, 1007s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 1007s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 1007s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 1007s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 1007s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 1007s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 1007s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 1007s rowWeightedSds, rowWeightedVars 1007s 1007s Welcome to Bioconductor 1007s 1007s Vignettes contain introductory material; view with 1007s 'browseVignettes()'. To cite Bioconductor, see 1007s 'citation("Biobase")', and for packages 'citation("pkgname")'. 1007s 1007s 1007s Attaching package: ‘Biobase’ 1007s 1007s The following object is masked from ‘package:MatrixGenerics’: 1007s 1007s rowMedians 1007s 1007s The following objects are masked from ‘package:matrixStats’: 1007s 1007s anyMissing, rowMedians 1007s 1017s 1017s 1017s RUNIT TEST PROTOCOL -- Mon Feb 9 22:57:41 2026 1017s *********************************************** 1017s Number of test functions: 103 1017s Number of errors: 0 1017s Number of failures: 0 1017s 1017s 1017s 1 Test Suite : 1017s Warning message: 1017s In for (i in seq_len(n)) { : 1017s closing unused connection 3 (/tmp/RtmpN6NMtb/file1878413a4850) 1017s ShortRead RUnit Tests - 103 test functions, 0 errors, 0 failures 1017s Number of test functions: 103 1017s Number of errors: 0 1017s Number of failures: 0 1017s > 1017s autopkgtest [22:57:42]: test pkg-r-autopkgtest: -----------------------] 1017s autopkgtest [22:57:42]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1017s pkg-r-autopkgtest PASS 1018s autopkgtest [22:57:43]: @@@@@@@@@@@@@@@@@@@@ summary 1018s pkg-r-autopkgtest PASS