0s autopkgtest [22:40:45]: starting date and time: 2026-02-09 22:40:45+0000 0s autopkgtest [22:40:45]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [22:40:45]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yjtn2vso/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lattice --apt-upgrade r-bioc-deseq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lattice/0.22-9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-ppc64el-25.secgroup --name adt-resolute-ppc64el-r-bioc-deseq-20260209-224045-juju-7f2275-prod-proposed-migration-environment-20-1299490c-7b45-4097-8ea5-3052d0c180ff --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-ppc64el-r-bioc-deseq-20260209-224045-juju-7f2275-prod-proposed-migration-environment-20-1299490c-7b45-4097-8ea5-3052d0c180ff from image adt/ubuntu-resolute-ppc64el-server-20260209.img (UUID f7f31435-4cd1-4090-aa55-59cfefa097ca)... 126s autopkgtest [22:42:51]: testbed dpkg architecture: ppc64el 126s autopkgtest [22:42:51]: testbed apt version: 3.1.15 126s autopkgtest [22:42:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup 126s autopkgtest [22:42:51]: testbed release detected to be: None 127s autopkgtest [22:42:52]: updating testbed package index (apt update) 127s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 127s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 127s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 127s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 127s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 127s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 128s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 132s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [246 kB] 132s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1534 kB] 135s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [19.4 kB] 135s Fetched 3774 kB in 8s (470 kB/s) 136s Reading package lists... 137s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 137s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 137s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 137s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 138s Reading package lists... 138s Reading package lists... 138s Building dependency tree... 138s Reading state information... 138s Calculating upgrade... 138s The following packages will be upgraded: 138s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 138s libip6tc2 libxtables12 wget 138s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 138s Need to get 3125 kB of archives. 138s After this operation, 78.8 kB of additional disk space will be used. 138s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el iptables ppc64el 1.8.11-2ubuntu3 [464 kB] 138s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip4tc2 ppc64el 1.8.11-2ubuntu3 [27.8 kB] 138s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libip6tc2 ppc64el 1.8.11-2ubuntu3 [28.2 kB] 138s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxtables12 ppc64el 1.8.11-2ubuntu3 [41.2 kB] 138s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el iproute2 ppc64el 6.18.0-1ubuntu1 [1458 kB] 140s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcryptsetup12 ppc64el 2:2.8.0-1ubuntu3 [404 kB] 140s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el wget ppc64el 1.25.0-2ubuntu4 [401 kB] 140s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cryptsetup-bin ppc64el 2:2.8.0-1ubuntu3 [250 kB] 140s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el dracut-install ppc64el 109-11ubuntu1 [51.3 kB] 141s dpkg-preconfigure: unable to re-open stdin: No such file or directory 141s Fetched 3125 kB in 2s (1381 kB/s) 141s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122003 files and directories currently installed.) 141s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_ppc64el.deb ... 141s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 142s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_ppc64el.deb ... 142s Unpacking libip4tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 143s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_ppc64el.deb ... 143s Unpacking libip6tc2:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 143s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_ppc64el.deb ... 144s Unpacking libxtables12:ppc64el (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 144s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_ppc64el.deb ... 145s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 146s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 146s Unpacking libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 146s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_ppc64el.deb ... 146s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 146s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_ppc64el.deb ... 147s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 147s Preparing to unpack .../8-dracut-install_109-11ubuntu1_ppc64el.deb ... 147s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 147s Setting up libip4tc2:ppc64el (1.8.11-2ubuntu3) ... 147s Setting up wget (1.25.0-2ubuntu4) ... 147s Setting up libip6tc2:ppc64el (1.8.11-2ubuntu3) ... 147s Setting up libxtables12:ppc64el (1.8.11-2ubuntu3) ... 147s Setting up dracut-install (109-11ubuntu1) ... 147s Setting up libcryptsetup12:ppc64el (2:2.8.0-1ubuntu3) ... 148s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 148s Setting up iptables (1.8.11-2ubuntu3) ... 148s Setting up iproute2 (6.18.0-1ubuntu1) ... 148s Processing triggers for man-db (2.13.1-1build1) ... 150s Processing triggers for install-info (7.2-5) ... 150s Processing triggers for libc-bin (2.42-2ubuntu4) ... 151s autopkgtest [22:43:16]: upgrading testbed (apt dist-upgrade and autopurge) 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Calculating upgrade... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Solving dependencies... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 154s autopkgtest [22:43:19]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:13:51 UTC 2026 154s autopkgtest [22:43:19]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-deseq 158s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-deseq 1.39.0-17 (dsc) [2207 B] 158s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-deseq 1.39.0-17 (tar) [1692 kB] 158s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-deseq 1.39.0-17 (diff) [3244 B] 158s gpgv: Signature made Mon Jan 13 20:08:14 2025 UTC 158s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 158s gpgv: issuer "crusoe@debian.org" 158s gpgv: Can't check signature: No public key 158s dpkg-source: warning: cannot verify inline signature for ./r-bioc-deseq_1.39.0-17.dsc: no acceptable signature found 158s autopkgtest [22:43:23]: testing package r-bioc-deseq version 1.39.0-17 159s autopkgtest [22:43:24]: build not needed 161s autopkgtest [22:43:26]: test pkg-r-autopkgtest: preparing testbed 161s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s Solving dependencies... 161s The following NEW packages will be installed: 161s build-essential cpp cpp-15 cpp-15-powerpc64le-linux-gnu 161s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 161s fonts-dejavu-core fonts-dejavu-mono g++ g++-15 g++-15-powerpc64le-linux-gnu 161s g++-powerpc64le-linux-gnu gcc gcc-15 gcc-15-powerpc64le-linux-gnu 161s gcc-powerpc64le-linux-gnu gfortran gfortran-15 161s gfortran-15-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 161s icu-devtools libasan8 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev 161s libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 161s libfontconfig1 libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 161s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libisl23 libitm1 libjbig0 161s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 161s liblapack-dev liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 161s libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 161s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 161s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 161s libreadline-dev libsharpyuv0 libsm6 libstdc++-15-dev libtcl8.6 libthai-data 161s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 161s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 libzstd-dev 161s linux-libc-dev pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 161s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics 161s r-bioc-biostrings r-bioc-deseq r-bioc-genefilter r-bioc-geneplotter 161s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-iranges r-bioc-keggrest 161s r-bioc-matrixgenerics r-bioc-s4vectors r-bioc-ucsc.utils r-bioc-xvector 161s r-bioc-zlibbioc r-cran-askpass r-cran-bit r-cran-bit64 r-cran-bitops 161s r-cran-blob r-cran-cachem r-cran-catools r-cran-cli r-cran-cpp11 161s r-cran-crayon r-cran-curl r-cran-dbi r-cran-fastmap r-cran-gdata r-cran-glue 161s r-cran-gplots r-cran-gtools r-cran-httr r-cran-jsonlite r-cran-kernsmooth 161s r-cran-lattice r-cran-lifecycle r-cran-locfit r-cran-mass r-cran-matrix 161s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl 161s r-cran-pkgconfig r-cran-plogr r-cran-png r-cran-r6 r-cran-rcolorbrewer 161s r-cran-rlang r-cran-rsqlite r-cran-survival r-cran-sys r-cran-vctrs 161s r-cran-xml r-cran-xtable rpcsvc-proto unzip x11-common xdg-utils zip 161s zlib1g-dev 161s 0 upgraded, 162 newly installed, 0 to remove and 0 not upgraded. 161s Need to get 231 MB of archives. 161s After this operation, 606 MB of additional disk space will be used. 161s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc-dev-bin ppc64el 2.42-2ubuntu4 [23.9 kB] 161s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el linux-libc-dev ppc64el 6.19.0-3.3 [1832 kB] 164s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcrypt-dev ppc64el 1:4.5.1-1 [162 kB] 164s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el rpcsvc-proto ppc64el 1.4.3-1build1 [84.2 kB] 164s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el libc6-dev ppc64el 2.42-2ubuntu4 [2080 kB] 169s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libisl23 ppc64el 0.27-1build1 [893 kB] 169s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmpc3 ppc64el 1.3.1-2 [62.5 kB] 169s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [11.4 MB] 187s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15 ppc64el 15.2.0-12ubuntu1 [1038 B] 187s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [5746 B] 187s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp ppc64el 4:15.2.0-4ubuntu1 [22.4 kB] 187s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcc1-0 ppc64el 15.2.0-12ubuntu1 [49.0 kB] 187s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-12ubuntu1 [169 kB] 187s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el libitm1 ppc64el 15.2.0-12ubuntu1 [32.2 kB] 187s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el libasan8 ppc64el 15.2.0-12ubuntu1 [3006 kB] 192s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblsan0 ppc64el 15.2.0-12ubuntu1 [1374 kB] 194s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtsan2 ppc64el 15.2.0-12ubuntu1 [2729 kB] 199s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el libubsan1 ppc64el 15.2.0-12ubuntu1 [1231 kB] 200s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el libquadmath0 ppc64el 15.2.0-12ubuntu1 [160 kB] 200s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgcc-15-dev ppc64el 15.2.0-12ubuntu1 [1670 kB] 203s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [22.4 MB] 237s Get:22 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15 ppc64el 15.2.0-12ubuntu1 [530 kB] 238s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1220 B] 238s Get:24 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc ppc64el 4:15.2.0-4ubuntu1 [5032 B] 238s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el libstdc++-15-dev ppc64el 15.2.0-12ubuntu1 [2747 kB] 242s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [13.0 MB] 272s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15 ppc64el 15.2.0-12ubuntu1 [25.3 kB] 272s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [970 B] 272s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++ ppc64el 4:15.2.0-4ubuntu1 [1092 B] 272s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el build-essential ppc64el 12.12ubuntu2 [5256 B] 272s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el dctrl-tools ppc64el 2.24-3build4 [108 kB] 272s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-mono all 2.37-8build1 [502 kB] 272s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-core all 2.37-8build1 [834 kB] 273s Get:34 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig-config ppc64el 2.17.1-3ubuntu1 [38.5 kB] 273s Get:35 http://ftpmaster.internal/ubuntu resolute/main ppc64el libfontconfig1 ppc64el 2.17.1-3ubuntu1 [193 kB] 273s Get:36 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig ppc64el 2.17.1-3ubuntu1 [182 kB] 273s Get:37 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran5 ppc64el 15.2.0-12ubuntu1 [620 kB] 274s Get:38 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran-15-dev ppc64el 15.2.0-12ubuntu1 [651 kB] 275s Get:39 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [12.3 MB] 296s Get:40 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-15 ppc64el 15.2.0-12ubuntu1 [18.1 kB] 296s Get:41 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1020 B] 296s Get:42 http://ftpmaster.internal/ubuntu resolute/main ppc64el gfortran ppc64el 4:15.2.0-4ubuntu1 [1166 B] 296s Get:43 http://ftpmaster.internal/ubuntu resolute/main ppc64el icu-devtools ppc64el 78.2-1ubuntu1 [246 kB] 296s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas3 ppc64el 3.12.1-7ubuntu1 [291 kB] 296s Get:45 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas-dev ppc64el 3.12.1-7ubuntu1 [306 kB] 296s Get:46 http://ftpmaster.internal/ubuntu resolute/main ppc64el libbz2-dev ppc64el 1.0.8-6build2 [50.0 kB] 296s Get:47 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpixman-1-0 ppc64el 0.46.4-1 [347 kB] 296s Get:48 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-render0 ppc64el 1.17.0-2ubuntu1 [17.4 kB] 296s Get:49 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-shm0 ppc64el 1.17.0-2ubuntu1 [6072 B] 296s Get:50 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxrender1 ppc64el 1:0.9.12-1 [23.0 kB] 296s Get:51 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcairo2 ppc64el 1.18.4-3 [759 kB] 297s Get:52 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdatrie1 ppc64el 0.2.14-1 [22.7 kB] 297s Get:53 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate0 ppc64el 1.23-2build1 [64.1 kB] 298s Get:54 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate-dev ppc64el 1.23-2build1 [71.8 kB] 298s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgraphite2-3 ppc64el 1.3.14-11ubuntu1 [85.3 kB] 298s Get:56 http://ftpmaster.internal/ubuntu resolute/main ppc64el libharfbuzz0b ppc64el 12.3.2-1 [663 kB] 299s Get:57 http://ftpmaster.internal/ubuntu resolute/main ppc64el x11-common all 1:7.7+24ubuntu1 [22.4 kB] 299s Get:58 http://ftpmaster.internal/ubuntu resolute/main ppc64el libice6 ppc64el 2:1.1.1-1build1 [51.9 kB] 299s Get:59 http://ftpmaster.internal/ubuntu resolute/main ppc64el libicu-dev ppc64el 78.2-1ubuntu1 [13.3 MB] 319s Get:60 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-4ubuntu3 [214 kB] 319s Get:61 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-4ubuntu3 [358 kB] 319s Get:62 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 319s Get:63 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 319s Get:64 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 319s Get:65 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack3 ppc64el 3.12.1-7ubuntu1 [2960 kB] 325s Get:66 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack-dev ppc64el 3.12.1-7ubuntu1 [6357 kB] 335s Get:67 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu2 [315 kB] 335s Get:68 http://ftpmaster.internal/ubuntu resolute/main ppc64el libncurses-dev ppc64el 6.6+20251231-1 [505 kB] 335s Get:69 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai-data all 0.1.30-1 [155 kB] 335s Get:70 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai0 ppc64el 0.1.30-1 [22.5 kB] 335s Get:71 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpango-1.0-0 ppc64el 1.57.0-1 [283 kB] 335s Get:72 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangoft2-1.0-0 ppc64el 1.57.0-1 [61.2 kB] 335s Get:73 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangocairo-1.0-0 ppc64el 1.57.0-1 [31.0 kB] 335s Get:74 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper2 ppc64el 2.2.5-0.3build1 [18.1 kB] 335s Get:75 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpaper-utils ppc64el 2.2.5-0.3build1 [15.7 kB] 335s Get:76 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-16-0 ppc64el 10.46-1 [292 kB] 335s Get:77 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-32-0 ppc64el 10.46-1 [275 kB] 335s Get:78 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-posix3 ppc64el 10.46-1 [7334 B] 336s Get:79 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcre2-dev ppc64el 10.46-1 [937 kB] 338s Get:80 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpkgconf3 ppc64el 1.8.1-4build1 [37.9 kB] 338s Get:81 http://ftpmaster.internal/ubuntu resolute/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [903 kB] 340s Get:82 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpng-dev ppc64el 1.6.54-1 [326 kB] 340s Get:83 http://ftpmaster.internal/ubuntu resolute/main ppc64el libreadline-dev ppc64el 8.3-3 [252 kB] 340s Get:84 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1build1 [24.7 kB] 340s Get:85 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsm6 ppc64el 2:1.2.6-1build1 [18.6 kB] 340s Get:86 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtcl8.6 ppc64el 8.6.17+dfsg-1build1 [1239 kB] 343s Get:87 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu3 [37.1 kB] 343s Get:88 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebp7 ppc64el 1.5.0-0.1build1 [330 kB] 343s Get:89 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu3 [307 kB] 343s Get:90 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxft2 ppc64el 2.3.6-1build2 [61.6 kB] 343s Get:91 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxss1 ppc64el 1:1.2.3-1build4 [7470 B] 343s Get:92 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtk8.6 ppc64el 8.6.17-1 [968 kB] 345s Get:93 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.3 [203 kB] 345s Get:94 http://ftpmaster.internal/ubuntu resolute/main ppc64el libzstd-dev ppc64el 1.5.7+dfsg-3 [528 kB] 346s Get:95 http://ftpmaster.internal/ubuntu resolute/main ppc64el zip ppc64el 3.0-15ubuntu3 [198 kB] 346s Get:96 http://ftpmaster.internal/ubuntu resolute/main ppc64el unzip ppc64el 6.0-29ubuntu1 [200 kB] 346s Get:97 http://ftpmaster.internal/ubuntu resolute/main ppc64el xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 346s Get:98 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-core ppc64el 4.5.2-1ubuntu2 [29.3 MB] 410s Get:99 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblzma-dev ppc64el 5.8.2-2 [210 kB] 410s Get:100 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf-bin ppc64el 1.8.1-4build1 [22.7 kB] 410s Get:101 http://ftpmaster.internal/ubuntu resolute/main ppc64el pkgconf ppc64el 1.8.1-4build1 [16.8 kB] 410s Get:102 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtirpc-dev ppc64el 1.3.6+ds-1 [223 kB] 410s Get:103 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-base-dev all 4.5.2-1ubuntu2 [1880 B] 410s Get:104 http://ftpmaster.internal/ubuntu resolute/universe ppc64el pkg-r-autopkgtest all 20250812 [6158 B] 410s Get:105 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biocgenerics all 0.52.0-2 [624 kB] 412s Get:106 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biobase ppc64el 2.66.0-2 [2341 kB] 417s Get:107 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-s4vectors ppc64el 0.44.0+dfsg-2 [2078 kB] 422s Get:108 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-iranges ppc64el 2.40.1-3 [2309 kB] 426s Get:109 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-dbi all 1.2.3-1build1 [855 kB] 428s Get:110 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bit ppc64el 4.6.0+dfsg-1 [475 kB] 428s Get:111 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bit64 ppc64el 4.6.0-1-4 [507 kB] 428s Get:112 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rlang ppc64el 1.1.5-3 [1738 kB] 431s Get:113 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cli ppc64el 3.6.4-1 [1411 kB] 433s Get:114 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-glue ppc64el 1.8.0-1 [165 kB] 433s Get:115 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 433s Get:116 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 435s Get:117 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-blob all 1.3.0-1 [54.1 kB] 435s Get:118 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-fastmap ppc64el 1.2.0-1 [75.0 kB] 435s Get:119 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cachem ppc64el 1.1.0-1 [74.1 kB] 435s Get:120 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-memoise all 2.0.1-1build1 [54.5 kB] 435s Get:121 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 435s Get:122 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-plogr all 0.2.0-3build2 [15.8 kB] 435s Get:123 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-cpp11 all 0.5.3-1 [242 kB] 435s Get:124 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rsqlite ppc64el 2.3.9-1 [1572 kB] 438s Get:125 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-curl ppc64el 7.0.0+dfsg-1 [205 kB] 438s Get:126 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-jsonlite ppc64el 1.9.1+dfsg-1 [452 kB] 438s Get:127 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mime ppc64el 0.12-2 [35.9 kB] 438s Get:128 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-sys ppc64el 3.4.3-1 [45.5 kB] 438s Get:129 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-askpass ppc64el 1.2.1-1 [24.9 kB] 438s Get:130 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-openssl ppc64el 2.3.2+dfsg-1 [409 kB] 438s Get:131 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-r6 all 2.6.1-1 [101 kB] 438s Get:132 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 438s Get:133 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-png ppc64el 0.1-8-1build2 [44.3 kB] 438s Get:134 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 438s Get:135 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-xvector ppc64el 0.46.0-2 [629 kB] 439s Get:136 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 439s Get:137 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 460s Get:138 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 466s Get:139 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-crayon all 1.5.3-1 [165 kB] 466s Get:140 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-biostrings ppc64el 2.74.1+dfsg-2 [13.3 MB] 491s Get:141 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 492s Get:142 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 500s Get:143 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xml ppc64el 3.99-0.20-1 [1761 kB] 503s Get:144 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-xtable all 1:1.8-4-2build1 [691 kB] 504s Get:145 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-annotate all 1.84.0+dfsg-2 [1870 kB] 508s Get:146 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el r-cran-lattice ppc64el 0.22-9-1 [1399 kB] 510s Get:147 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-locfit ppc64el 1.5-9.12-1 [583 kB] 511s Get:148 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-matrixstats ppc64el 1.5.0-1 [578 kB] 512s Get:149 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 512s Get:150 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-matrix ppc64el 1.7-4-1 [4584 kB] 521s Get:151 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-survival ppc64el 3.8-6-1 [8312 kB] 536s Get:152 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-genefilter ppc64el 1.88.0-2 [1243 kB] 538s Get:153 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 538s Get:154 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-geneplotter all 1.84.0+dfsg-2 [1508 kB] 541s Get:155 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-mass ppc64el 7.3-65-1 [1116 kB] 542s Get:156 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-bioc-deseq ppc64el 1.39.0-17 [1987 kB] 545s Get:157 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-bitops ppc64el 1.0-9-1 [30.4 kB] 545s Get:158 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-catools ppc64el 1.18.3-1 [211 kB] 546s Get:159 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-gtools ppc64el 3.9.5-1build1 [345 kB] 546s Get:160 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-gdata all 3.0.1-1build1 [491 kB] 546s Get:161 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-kernsmooth ppc64el 2.23-26-1build1 [96.8 kB] 546s Get:162 http://ftpmaster.internal/ubuntu resolute/universe ppc64el r-cran-gplots all 3.3.0-1 [3825 kB] 553s Preconfiguring packages ... 553s Fetched 231 MB in 6min 31s (590 kB/s) 553s Selecting previously unselected package libc-dev-bin. 553s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 122006 files and directories currently installed.) 553s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_ppc64el.deb ... 553s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 553s Selecting previously unselected package linux-libc-dev:ppc64el. 553s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_ppc64el.deb ... 553s Unpacking linux-libc-dev:ppc64el (6.19.0-3.3) ... 553s Selecting previously unselected package libcrypt-dev:ppc64el. 553s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_ppc64el.deb ... 553s Unpacking libcrypt-dev:ppc64el (1:4.5.1-1) ... 553s Selecting previously unselected package rpcsvc-proto. 553s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_ppc64el.deb ... 553s Unpacking rpcsvc-proto (1.4.3-1build1) ... 553s Selecting previously unselected package libc6-dev:ppc64el. 553s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_ppc64el.deb ... 553s Unpacking libc6-dev:ppc64el (2.42-2ubuntu4) ... 553s Selecting previously unselected package libisl23:ppc64el. 553s Preparing to unpack .../005-libisl23_0.27-1build1_ppc64el.deb ... 553s Unpacking libisl23:ppc64el (0.27-1build1) ... 553s Selecting previously unselected package libmpc3:ppc64el. 553s Preparing to unpack .../006-libmpc3_1.3.1-2_ppc64el.deb ... 553s Unpacking libmpc3:ppc64el (1.3.1-2) ... 553s Selecting previously unselected package cpp-15-powerpc64le-linux-gnu. 553s Preparing to unpack .../007-cpp-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 553s Unpacking cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 553s Selecting previously unselected package cpp-15. 553s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_ppc64el.deb ... 553s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 553s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 553s Preparing to unpack .../009-cpp-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 553s Unpacking cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 553s Selecting previously unselected package cpp. 553s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 553s Unpacking cpp (4:15.2.0-4ubuntu1) ... 553s Selecting previously unselected package libcc1-0:ppc64el. 553s Preparing to unpack .../011-libcc1-0_15.2.0-12ubuntu1_ppc64el.deb ... 553s Unpacking libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 553s Selecting previously unselected package libgomp1:ppc64el. 553s Preparing to unpack .../012-libgomp1_15.2.0-12ubuntu1_ppc64el.deb ... 553s Unpacking libgomp1:ppc64el (15.2.0-12ubuntu1) ... 553s Selecting previously unselected package libitm1:ppc64el. 553s Preparing to unpack .../013-libitm1_15.2.0-12ubuntu1_ppc64el.deb ... 553s Unpacking libitm1:ppc64el (15.2.0-12ubuntu1) ... 553s Selecting previously unselected package libasan8:ppc64el. 554s Preparing to unpack .../014-libasan8_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking libasan8:ppc64el (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package liblsan0:ppc64el. 554s Preparing to unpack .../015-liblsan0_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking liblsan0:ppc64el (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package libtsan2:ppc64el. 554s Preparing to unpack .../016-libtsan2_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking libtsan2:ppc64el (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package libubsan1:ppc64el. 554s Preparing to unpack .../017-libubsan1_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking libubsan1:ppc64el (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package libquadmath0:ppc64el. 554s Preparing to unpack .../018-libquadmath0_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package libgcc-15-dev:ppc64el. 554s Preparing to unpack .../019-libgcc-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package gcc-15-powerpc64le-linux-gnu. 554s Preparing to unpack .../020-gcc-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package gcc-15. 554s Preparing to unpack .../021-gcc-15_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 554s Preparing to unpack .../022-gcc-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 554s Unpacking gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 554s Selecting previously unselected package gcc. 554s Preparing to unpack .../023-gcc_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 554s Unpacking gcc (4:15.2.0-4ubuntu1) ... 554s Selecting previously unselected package libstdc++-15-dev:ppc64el. 554s Preparing to unpack .../024-libstdc++-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package g++-15-powerpc64le-linux-gnu. 554s Preparing to unpack .../025-g++-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package g++-15. 554s Preparing to unpack .../026-g++-15_15.2.0-12ubuntu1_ppc64el.deb ... 554s Unpacking g++-15 (15.2.0-12ubuntu1) ... 554s Selecting previously unselected package g++-powerpc64le-linux-gnu. 554s Preparing to unpack .../027-g++-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 554s Unpacking g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 554s Selecting previously unselected package g++. 554s Preparing to unpack .../028-g++_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 554s Unpacking g++ (4:15.2.0-4ubuntu1) ... 555s Selecting previously unselected package build-essential. 555s Preparing to unpack .../029-build-essential_12.12ubuntu2_ppc64el.deb ... 555s Unpacking build-essential (12.12ubuntu2) ... 555s Selecting previously unselected package dctrl-tools. 555s Preparing to unpack .../030-dctrl-tools_2.24-3build4_ppc64el.deb ... 555s Unpacking dctrl-tools (2.24-3build4) ... 555s Selecting previously unselected package fonts-dejavu-mono. 555s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8build1_all.deb ... 555s Unpacking fonts-dejavu-mono (2.37-8build1) ... 555s Selecting previously unselected package fonts-dejavu-core. 555s Preparing to unpack .../032-fonts-dejavu-core_2.37-8build1_all.deb ... 555s Unpacking fonts-dejavu-core (2.37-8build1) ... 555s Selecting previously unselected package fontconfig-config. 555s Preparing to unpack .../033-fontconfig-config_2.17.1-3ubuntu1_ppc64el.deb ... 555s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 555s Selecting previously unselected package libfontconfig1:ppc64el. 555s Preparing to unpack .../034-libfontconfig1_2.17.1-3ubuntu1_ppc64el.deb ... 555s Unpacking libfontconfig1:ppc64el (2.17.1-3ubuntu1) ... 555s Selecting previously unselected package fontconfig. 555s Preparing to unpack .../035-fontconfig_2.17.1-3ubuntu1_ppc64el.deb ... 555s Unpacking fontconfig (2.17.1-3ubuntu1) ... 555s Selecting previously unselected package libgfortran5:ppc64el. 555s Preparing to unpack .../036-libgfortran5_15.2.0-12ubuntu1_ppc64el.deb ... 555s Unpacking libgfortran5:ppc64el (15.2.0-12ubuntu1) ... 555s Selecting previously unselected package libgfortran-15-dev:ppc64el. 555s Preparing to unpack .../037-libgfortran-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 555s Unpacking libgfortran-15-dev:ppc64el (15.2.0-12ubuntu1) ... 555s Selecting previously unselected package gfortran-15-powerpc64le-linux-gnu. 555s Preparing to unpack .../038-gfortran-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 555s Unpacking gfortran-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 555s Selecting previously unselected package gfortran-15. 555s Preparing to unpack .../039-gfortran-15_15.2.0-12ubuntu1_ppc64el.deb ... 555s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 555s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 555s Preparing to unpack .../040-gfortran-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 555s Unpacking gfortran-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 555s Selecting previously unselected package gfortran. 555s Preparing to unpack .../041-gfortran_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 555s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 555s Selecting previously unselected package icu-devtools. 555s Preparing to unpack .../042-icu-devtools_78.2-1ubuntu1_ppc64el.deb ... 555s Unpacking icu-devtools (78.2-1ubuntu1) ... 555s Selecting previously unselected package libblas3:ppc64el. 555s Preparing to unpack .../043-libblas3_3.12.1-7ubuntu1_ppc64el.deb ... 555s Unpacking libblas3:ppc64el (3.12.1-7ubuntu1) ... 555s Selecting previously unselected package libblas-dev:ppc64el. 555s Preparing to unpack .../044-libblas-dev_3.12.1-7ubuntu1_ppc64el.deb ... 555s Unpacking libblas-dev:ppc64el (3.12.1-7ubuntu1) ... 555s Selecting previously unselected package libbz2-dev:ppc64el. 555s Preparing to unpack .../045-libbz2-dev_1.0.8-6build2_ppc64el.deb ... 555s Unpacking libbz2-dev:ppc64el (1.0.8-6build2) ... 555s Selecting previously unselected package libpixman-1-0:ppc64el. 555s Preparing to unpack .../046-libpixman-1-0_0.46.4-1_ppc64el.deb ... 555s Unpacking libpixman-1-0:ppc64el (0.46.4-1) ... 555s Selecting previously unselected package libxcb-render0:ppc64el. 555s Preparing to unpack .../047-libxcb-render0_1.17.0-2ubuntu1_ppc64el.deb ... 555s Unpacking libxcb-render0:ppc64el (1.17.0-2ubuntu1) ... 555s Selecting previously unselected package libxcb-shm0:ppc64el. 555s Preparing to unpack .../048-libxcb-shm0_1.17.0-2ubuntu1_ppc64el.deb ... 555s Unpacking libxcb-shm0:ppc64el (1.17.0-2ubuntu1) ... 555s Selecting previously unselected package libxrender1:ppc64el. 555s Preparing to unpack .../049-libxrender1_1%3a0.9.12-1_ppc64el.deb ... 555s Unpacking libxrender1:ppc64el (1:0.9.12-1) ... 555s Selecting previously unselected package libcairo2:ppc64el. 555s Preparing to unpack .../050-libcairo2_1.18.4-3_ppc64el.deb ... 555s Unpacking libcairo2:ppc64el (1.18.4-3) ... 555s Selecting previously unselected package libdatrie1:ppc64el. 555s Preparing to unpack .../051-libdatrie1_0.2.14-1_ppc64el.deb ... 555s Unpacking libdatrie1:ppc64el (0.2.14-1) ... 555s Selecting previously unselected package libdeflate0:ppc64el. 555s Preparing to unpack .../052-libdeflate0_1.23-2build1_ppc64el.deb ... 555s Unpacking libdeflate0:ppc64el (1.23-2build1) ... 555s Selecting previously unselected package libdeflate-dev:ppc64el. 555s Preparing to unpack .../053-libdeflate-dev_1.23-2build1_ppc64el.deb ... 555s Unpacking libdeflate-dev:ppc64el (1.23-2build1) ... 555s Selecting previously unselected package libgraphite2-3:ppc64el. 555s Preparing to unpack .../054-libgraphite2-3_1.3.14-11ubuntu1_ppc64el.deb ... 555s Unpacking libgraphite2-3:ppc64el (1.3.14-11ubuntu1) ... 556s Selecting previously unselected package libharfbuzz0b:ppc64el. 556s Preparing to unpack .../055-libharfbuzz0b_12.3.2-1_ppc64el.deb ... 556s Unpacking libharfbuzz0b:ppc64el (12.3.2-1) ... 556s Selecting previously unselected package x11-common. 556s Preparing to unpack .../056-x11-common_1%3a7.7+24ubuntu1_all.deb ... 556s Unpacking x11-common (1:7.7+24ubuntu1) ... 556s Selecting previously unselected package libice6:ppc64el. 556s Preparing to unpack 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.../067-libncurses-dev_6.6+20251231-1_ppc64el.deb ... 557s Unpacking libncurses-dev:ppc64el (6.6+20251231-1) ... 557s Selecting previously unselected package libthai-data. 557s Preparing to unpack .../068-libthai-data_0.1.30-1_all.deb ... 557s Unpacking libthai-data (0.1.30-1) ... 557s Selecting previously unselected package libthai0:ppc64el. 557s Preparing to unpack .../069-libthai0_0.1.30-1_ppc64el.deb ... 557s Unpacking libthai0:ppc64el (0.1.30-1) ... 557s Selecting previously unselected package libpango-1.0-0:ppc64el. 557s Preparing to unpack .../070-libpango-1.0-0_1.57.0-1_ppc64el.deb ... 557s Unpacking libpango-1.0-0:ppc64el (1.57.0-1) ... 557s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 557s Preparing to unpack .../071-libpangoft2-1.0-0_1.57.0-1_ppc64el.deb ... 557s Unpacking libpangoft2-1.0-0:ppc64el (1.57.0-1) ... 557s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 557s Preparing to unpack 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.../082-libreadline-dev_8.3-3_ppc64el.deb ... 557s Unpacking libreadline-dev:ppc64el (8.3-3) ... 557s Selecting previously unselected package libsharpyuv0:ppc64el. 557s Preparing to unpack .../083-libsharpyuv0_1.5.0-0.1build1_ppc64el.deb ... 557s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1build1) ... 557s Selecting previously unselected package libsm6:ppc64el. 557s Preparing to unpack .../084-libsm6_2%3a1.2.6-1build1_ppc64el.deb ... 557s Unpacking libsm6:ppc64el (2:1.2.6-1build1) ... 557s Selecting previously unselected package libtcl8.6:ppc64el. 557s Preparing to unpack .../085-libtcl8.6_8.6.17+dfsg-1build1_ppc64el.deb ... 557s Unpacking libtcl8.6:ppc64el (8.6.17+dfsg-1build1) ... 557s Selecting previously unselected package libjbig0:ppc64el. 557s Preparing to unpack .../086-libjbig0_2.1-6.1ubuntu3_ppc64el.deb ... 557s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu3) ... 557s Selecting previously unselected package libwebp7:ppc64el. 557s Preparing to unpack .../087-libwebp7_1.5.0-0.1build1_ppc64el.deb ... 557s Unpacking libwebp7:ppc64el (1.5.0-0.1build1) ... 557s Selecting previously unselected package libtiff6:ppc64el. 557s Preparing to unpack .../088-libtiff6_4.7.0-3ubuntu3_ppc64el.deb ... 557s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu3) ... 557s Selecting previously unselected package libxft2:ppc64el. 557s Preparing to unpack .../089-libxft2_2.3.6-1build2_ppc64el.deb ... 557s Unpacking libxft2:ppc64el (2.3.6-1build2) ... 557s Selecting previously unselected package libxss1:ppc64el. 557s Preparing to unpack .../090-libxss1_1%3a1.2.3-1build4_ppc64el.deb ... 557s Unpacking libxss1:ppc64el (1:1.2.3-1build4) ... 557s Selecting previously unselected package libtk8.6:ppc64el. 557s Preparing to unpack .../091-libtk8.6_8.6.17-1_ppc64el.deb ... 557s Unpacking libtk8.6:ppc64el (8.6.17-1) ... 557s Selecting previously unselected package libxt6t64:ppc64el. 557s Preparing to unpack .../092-libxt6t64_1%3a1.2.1-1.3_ppc64el.deb ... 557s Unpacking libxt6t64:ppc64el (1:1.2.1-1.3) ... 557s Selecting previously unselected package libzstd-dev:ppc64el. 557s Preparing to unpack .../093-libzstd-dev_1.5.7+dfsg-3_ppc64el.deb ... 557s Unpacking libzstd-dev:ppc64el (1.5.7+dfsg-3) ... 557s Selecting previously unselected package zip. 557s Preparing to unpack .../094-zip_3.0-15ubuntu3_ppc64el.deb ... 557s Unpacking zip (3.0-15ubuntu3) ... 557s Selecting previously unselected package unzip. 557s Preparing to unpack .../095-unzip_6.0-29ubuntu1_ppc64el.deb ... 557s Unpacking unzip (6.0-29ubuntu1) ... 557s Selecting previously unselected package xdg-utils. 557s Preparing to unpack .../096-xdg-utils_1.2.1-2ubuntu2_all.deb ... 557s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 557s Selecting previously unselected package r-base-core. 557s Preparing to unpack .../097-r-base-core_4.5.2-1ubuntu2_ppc64el.deb ... 557s Unpacking r-base-core (4.5.2-1ubuntu2) ... 558s Selecting previously unselected package liblzma-dev:ppc64el. 558s Preparing to unpack .../098-liblzma-dev_5.8.2-2_ppc64el.deb ... 558s Unpacking liblzma-dev:ppc64el (5.8.2-2) ... 558s Selecting previously unselected package pkgconf-bin. 558s Preparing to unpack .../099-pkgconf-bin_1.8.1-4build1_ppc64el.deb ... 558s Unpacking pkgconf-bin (1.8.1-4build1) ... 558s Selecting previously unselected package pkgconf:ppc64el. 558s Preparing to unpack .../100-pkgconf_1.8.1-4build1_ppc64el.deb ... 558s Unpacking pkgconf:ppc64el (1.8.1-4build1) ... 558s Selecting previously unselected package libtirpc-dev:ppc64el. 558s Preparing to unpack .../101-libtirpc-dev_1.3.6+ds-1_ppc64el.deb ... 558s Unpacking libtirpc-dev:ppc64el (1.3.6+ds-1) ... 558s Selecting previously unselected package r-base-dev. 558s Preparing to unpack .../102-r-base-dev_4.5.2-1ubuntu2_all.deb ... 558s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 558s Selecting previously unselected package pkg-r-autopkgtest. 558s Preparing to unpack .../103-pkg-r-autopkgtest_20250812_all.deb ... 558s Unpacking pkg-r-autopkgtest (20250812) ... 558s Selecting previously unselected package r-bioc-biocgenerics. 558s Preparing to unpack .../104-r-bioc-biocgenerics_0.52.0-2_all.deb ... 558s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 558s Selecting previously unselected package r-bioc-biobase. 558s Preparing to unpack .../105-r-bioc-biobase_2.66.0-2_ppc64el.deb ... 558s Unpacking r-bioc-biobase (2.66.0-2) ... 558s Selecting previously unselected package r-bioc-s4vectors. 558s Preparing to unpack .../106-r-bioc-s4vectors_0.44.0+dfsg-2_ppc64el.deb ... 558s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 558s Selecting previously unselected package r-bioc-iranges. 558s Preparing to unpack .../107-r-bioc-iranges_2.40.1-3_ppc64el.deb ... 558s Unpacking r-bioc-iranges (2.40.1-3) ... 558s Selecting previously unselected package r-cran-dbi. 558s Preparing to unpack .../108-r-cran-dbi_1.2.3-1build1_all.deb ... 558s Unpacking r-cran-dbi (1.2.3-1build1) ... 558s Selecting previously unselected package r-cran-bit. 558s Preparing to unpack .../109-r-cran-bit_4.6.0+dfsg-1_ppc64el.deb ... 558s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 558s Selecting previously unselected package r-cran-bit64. 558s Preparing to unpack .../110-r-cran-bit64_4.6.0-1-4_ppc64el.deb ... 558s Unpacking r-cran-bit64 (4.6.0-1-4) ... 558s Selecting previously unselected package r-cran-rlang. 558s Preparing to unpack .../111-r-cran-rlang_1.1.5-3_ppc64el.deb ... 558s Unpacking r-cran-rlang (1.1.5-3) ... 558s Selecting previously unselected package r-cran-cli. 558s Preparing to unpack .../112-r-cran-cli_3.6.4-1_ppc64el.deb ... 558s Unpacking r-cran-cli (3.6.4-1) ... 558s Selecting previously unselected package r-cran-glue. 558s Preparing to unpack .../113-r-cran-glue_1.8.0-1_ppc64el.deb ... 558s Unpacking r-cran-glue (1.8.0-1) ... 558s Selecting previously unselected package r-cran-lifecycle. 558s Preparing to unpack .../114-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 558s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 558s Selecting previously unselected package r-cran-vctrs. 558s Preparing to unpack .../115-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 558s Unpacking r-cran-vctrs (0.6.5-1) ... 558s Selecting previously unselected package r-cran-blob. 558s Preparing to unpack .../116-r-cran-blob_1.3.0-1_all.deb ... 558s Unpacking r-cran-blob (1.3.0-1) ... 558s Selecting previously unselected package r-cran-fastmap. 558s Preparing to unpack .../117-r-cran-fastmap_1.2.0-1_ppc64el.deb ... 558s Unpacking r-cran-fastmap (1.2.0-1) ... 558s Selecting previously unselected package r-cran-cachem. 558s Preparing to unpack .../118-r-cran-cachem_1.1.0-1_ppc64el.deb ... 558s Unpacking r-cran-cachem (1.1.0-1) ... 558s Selecting previously unselected package r-cran-memoise. 558s Preparing to unpack .../119-r-cran-memoise_2.0.1-1build1_all.deb ... 558s Unpacking r-cran-memoise (2.0.1-1build1) ... 558s Selecting previously unselected package r-cran-pkgconfig. 558s Preparing to unpack .../120-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 558s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 559s Selecting previously unselected package r-cran-plogr. 559s Preparing to unpack .../121-r-cran-plogr_0.2.0-3build2_all.deb ... 559s Unpacking r-cran-plogr (0.2.0-3build2) ... 559s Selecting previously unselected package r-cran-cpp11. 559s Preparing to unpack .../122-r-cran-cpp11_0.5.3-1_all.deb ... 559s Unpacking r-cran-cpp11 (0.5.3-1) ... 559s Selecting previously unselected package r-cran-rsqlite. 559s Preparing to unpack .../123-r-cran-rsqlite_2.3.9-1_ppc64el.deb ... 559s Unpacking r-cran-rsqlite (2.3.9-1) ... 559s Selecting previously unselected package r-cran-curl. 559s Preparing to unpack .../124-r-cran-curl_7.0.0+dfsg-1_ppc64el.deb ... 559s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 559s Selecting previously unselected package r-cran-jsonlite. 559s Preparing to unpack .../125-r-cran-jsonlite_1.9.1+dfsg-1_ppc64el.deb ... 559s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 559s Selecting previously unselected package r-cran-mime. 559s Preparing to unpack .../126-r-cran-mime_0.12-2_ppc64el.deb ... 559s Unpacking r-cran-mime (0.12-2) ... 559s Selecting previously unselected package r-cran-sys. 559s Preparing to unpack .../127-r-cran-sys_3.4.3-1_ppc64el.deb ... 559s Unpacking r-cran-sys (3.4.3-1) ... 559s Selecting previously unselected package r-cran-askpass. 559s Preparing to unpack .../128-r-cran-askpass_1.2.1-1_ppc64el.deb ... 559s Unpacking r-cran-askpass (1.2.1-1) ... 559s Selecting previously unselected package r-cran-openssl. 559s Preparing to unpack .../129-r-cran-openssl_2.3.2+dfsg-1_ppc64el.deb ... 559s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 559s Selecting previously unselected package r-cran-r6. 559s Preparing to unpack .../130-r-cran-r6_2.6.1-1_all.deb ... 559s Unpacking r-cran-r6 (2.6.1-1) ... 559s Selecting previously unselected package r-cran-httr. 559s Preparing to unpack .../131-r-cran-httr_1.4.7+dfsg-1_all.deb ... 559s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 559s Selecting previously unselected package r-cran-png. 559s Preparing to unpack .../132-r-cran-png_0.1-8-1build2_ppc64el.deb ... 559s Unpacking r-cran-png (0.1-8-1build2) ... 559s Selecting previously unselected package r-bioc-zlibbioc. 559s Preparing to unpack .../133-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 559s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 559s Selecting previously unselected package r-bioc-xvector. 559s Preparing to unpack .../134-r-bioc-xvector_0.46.0-2_ppc64el.deb ... 559s Unpacking r-bioc-xvector (0.46.0-2) ... 559s Selecting previously unselected package r-bioc-ucsc.utils. 559s Preparing to unpack .../135-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 559s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 559s Selecting previously unselected package r-bioc-genomeinfodbdata. 559s Preparing to unpack .../136-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 559s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 559s Selecting previously unselected package r-bioc-genomeinfodb. 559s Preparing to unpack .../137-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 559s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 559s Selecting previously unselected package r-cran-crayon. 559s Preparing to unpack .../138-r-cran-crayon_1.5.3-1_all.deb ... 559s Unpacking r-cran-crayon (1.5.3-1) ... 559s Selecting previously unselected package r-bioc-biostrings. 559s Preparing to unpack .../139-r-bioc-biostrings_2.74.1+dfsg-2_ppc64el.deb ... 559s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 559s Selecting previously unselected package r-bioc-keggrest. 559s Preparing to unpack .../140-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 559s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 559s Selecting previously unselected package r-bioc-annotationdbi. 559s Preparing to unpack .../141-r-bioc-annotationdbi_1.68.0-2_all.deb ... 559s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 559s Selecting previously unselected package r-cran-xml. 559s Preparing to unpack .../142-r-cran-xml_3.99-0.20-1_ppc64el.deb ... 559s Unpacking r-cran-xml (3.99-0.20-1) ... 559s Selecting previously unselected package r-cran-xtable. 559s Preparing to unpack .../143-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 559s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 559s Selecting previously unselected package r-bioc-annotate. 559s Preparing to unpack .../144-r-bioc-annotate_1.84.0+dfsg-2_all.deb ... 559s Unpacking r-bioc-annotate (1.84.0+dfsg-2) ... 559s Selecting previously unselected package r-cran-lattice. 559s Preparing to unpack .../145-r-cran-lattice_0.22-9-1_ppc64el.deb ... 559s Unpacking r-cran-lattice (0.22-9-1) ... 559s Selecting previously unselected package r-cran-locfit. 559s Preparing to unpack .../146-r-cran-locfit_1.5-9.12-1_ppc64el.deb ... 559s Unpacking r-cran-locfit (1.5-9.12-1) ... 559s Selecting previously unselected package r-cran-matrixstats. 559s Preparing to unpack .../147-r-cran-matrixstats_1.5.0-1_ppc64el.deb ... 559s Unpacking r-cran-matrixstats (1.5.0-1) ... 559s Selecting previously unselected package r-bioc-matrixgenerics. 559s Preparing to unpack .../148-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 559s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 559s Selecting previously unselected package r-cran-matrix. 560s Preparing to unpack .../149-r-cran-matrix_1.7-4-1_ppc64el.deb ... 560s Unpacking r-cran-matrix (1.7-4-1) ... 560s Selecting previously unselected package r-cran-survival. 560s Preparing to unpack .../150-r-cran-survival_3.8-6-1_ppc64el.deb ... 560s Unpacking r-cran-survival (3.8-6-1) ... 560s Selecting previously unselected package r-bioc-genefilter. 560s Preparing to unpack .../151-r-bioc-genefilter_1.88.0-2_ppc64el.deb ... 560s Unpacking r-bioc-genefilter (1.88.0-2) ... 560s Selecting previously unselected package r-cran-rcolorbrewer. 560s Preparing to unpack .../152-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 560s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 560s Selecting previously unselected package r-bioc-geneplotter. 560s Preparing to unpack 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Selecting previously unselected package r-cran-gdata. 560s Preparing to unpack .../159-r-cran-gdata_3.0.1-1build1_all.deb ... 560s Unpacking r-cran-gdata (3.0.1-1build1) ... 560s Selecting previously unselected package r-cran-kernsmooth. 560s Preparing to unpack .../160-r-cran-kernsmooth_2.23-26-1build1_ppc64el.deb ... 560s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 560s Selecting previously unselected package r-cran-gplots. 560s Preparing to unpack .../161-r-cran-gplots_3.3.0-1_all.deb ... 560s Unpacking r-cran-gplots (3.3.0-1) ... 560s Setting up libgraphite2-3:ppc64el (1.3.14-11ubuntu1) ... 560s Setting up libpixman-1-0:ppc64el (0.46.4-1) ... 560s Setting up libsharpyuv0:ppc64el (1.5.0-0.1build1) ... 560s Setting up liblerc4:ppc64el (4.0.0+ds-5ubuntu2) ... 560s Setting up libzstd-dev:ppc64el (1.5.7+dfsg-3) ... 560s Setting up libxrender1:ppc64el (1:0.9.12-1) ... 560s Setting up libdatrie1:ppc64el (0.2.14-1) ... 560s Setting up libxcb-render0:ppc64el (1.17.0-2ubuntu1) ... 560s Setting up unzip (6.0-29ubuntu1) ... 560s Setting up x11-common (1:7.7+24ubuntu1) ... 560s Setting up libdeflate0:ppc64el (1.23-2build1) ... 560s Setting up linux-libc-dev:ppc64el (6.19.0-3.3) ... 560s Setting up libxcb-shm0:ppc64el (1.17.0-2ubuntu1) ... 560s Setting up libgomp1:ppc64el (15.2.0-12ubuntu1) ... 560s Setting up libjbig0:ppc64el (2.1-6.1ubuntu3) ... 560s Setting up libpcre2-16-0:ppc64el (10.46-1) ... 560s Setting up zip (3.0-15ubuntu3) ... 560s Setting up libpcre2-32-0:ppc64el (10.46-1) ... 560s Setting up libblas3:ppc64el (3.12.1-7ubuntu1) ... 560s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 560s Setting up libtirpc-dev:ppc64el (1.3.6+ds-1) ... 560s Setting up libpkgconf3:ppc64el (1.8.1-4build1) ... 560s Setting up rpcsvc-proto (1.4.3-1build1) ... 560s Setting up libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 560s Setting up fonts-dejavu-mono (2.37-8build1) ... 560s Setting up libmpc3:ppc64el (1.3.1-2) ... 560s Setting up libtcl8.6:ppc64el (8.6.17+dfsg-1build1) ... 560s Setting up icu-devtools (78.2-1ubuntu1) ... 560s Setting up fonts-dejavu-core (2.37-8build1) ... 560s Setting up pkgconf-bin (1.8.1-4build1) ... 560s Setting up libjpeg-turbo8:ppc64el (2.1.5-4ubuntu3) ... 560s Setting up libgfortran5:ppc64el (15.2.0-12ubuntu1) ... 560s Setting up libwebp7:ppc64el (1.5.0-0.1build1) ... 560s Setting up liblzma-dev:ppc64el (5.8.2-2) ... 560s Setting up libubsan1:ppc64el (15.2.0-12ubuntu1) ... 560s Setting up libpcre2-posix3:ppc64el (10.46-1) ... 560s Setting up libcrypt-dev:ppc64el (1:4.5.1-1) ... 560s Setting up libasan8:ppc64el (15.2.0-12ubuntu1) ... 560s Setting up libharfbuzz0b:ppc64el (12.3.2-1) ... 560s Setting up libthai-data (0.1.30-1) ... 560s Setting up libxss1:ppc64el (1:1.2.3-1build4) ... 560s Setting up libpaper2:ppc64el (2.2.5-0.3build1) ... 561s Setting up libtsan2:ppc64el (15.2.0-12ubuntu1) ... 561s Setting up libisl23:ppc64el (0.27-1build1) ... 561s Setting up libc-dev-bin (2.42-2ubuntu4) ... 561s Setting up libdeflate-dev:ppc64el (1.23-2build1) ... 561s Setting up xdg-utils (1.2.1-2ubuntu2) ... 561s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 561s Setting up libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 561s Setting up liblsan0:ppc64el (15.2.0-12ubuntu1) ... 561s Setting up libblas-dev:ppc64el (3.12.1-7ubuntu1) ... 561s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode 561s Setting up dctrl-tools (2.24-3build4) ... 561s Setting up libitm1:ppc64el (15.2.0-12ubuntu1) ... 561s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 561s Setting up libice6:ppc64el (2:1.1.1-1build1) ... 561s Setting up liblapack3:ppc64el (3.12.1-7ubuntu1) ... 561s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 561s Setting up libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 561s Setting up fontconfig-config (2.17.1-3ubuntu1) ... 561s Setting up libpaper-utils (2.2.5-0.3build1) ... 561s Setting up libgfortran-15-dev:ppc64el (15.2.0-12ubuntu1) ... 561s Setting up pkgconf:ppc64el (1.8.1-4build1) ... 561s Setting up libthai0:ppc64el (0.1.30-1) ... 561s Setting up cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 561s Setting up liblapack-dev:ppc64el (3.12.1-7ubuntu1) ... 561s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode 561s Setting up cpp-15 (15.2.0-12ubuntu1) ... 561s Setting up libtiff6:ppc64el (4.7.0-3ubuntu3) ... 561s Setting up libc6-dev:ppc64el (2.42-2ubuntu4) ... 561s Setting up libfontconfig1:ppc64el (2.17.1-3ubuntu1) ... 561s Setting up libsm6:ppc64el (2:1.2.6-1build1) ... 561s Setting up libicu-dev:ppc64el (78.2-1ubuntu1) ... 561s Setting up cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 561s Setting up libbz2-dev:ppc64el (1.0.8-6build2) ... 561s Setting up fontconfig (2.17.1-3ubuntu1) ... 564s Regenerating fonts cache... done. 564s Setting up libjpeg-turbo8-dev:ppc64el (2.1.5-4ubuntu3) ... 564s Setting up libxft2:ppc64el (2.3.6-1build2) ... 564s Setting up libncurses-dev:ppc64el (6.6+20251231-1) ... 564s Setting up libpcre2-dev:ppc64el (10.46-1) ... 564s Setting up gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 564s Setting up libtk8.6:ppc64el (8.6.17-1) ... 564s Setting up libpango-1.0-0:ppc64el (1.57.0-1) ... 564s Setting up libreadline-dev:ppc64el (8.3-3) ... 564s Setting up libcairo2:ppc64el (1.18.4-3) ... 564s Setting up gcc-15 (15.2.0-12ubuntu1) ... 564s Setting up libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 564s Setting up gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 564s Setting up libxt6t64:ppc64el (1:1.2.1-1.3) ... 564s Setting up gfortran-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 564s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 564s Setting up cpp (4:15.2.0-4ubuntu1) ... 564s Setting up libpangoft2-1.0-0:ppc64el (1.57.0-1) ... 564s Setting up libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 564s Setting up gfortran-15 (15.2.0-12ubuntu1) ... 564s Setting up libpangocairo-1.0-0:ppc64el (1.57.0-1) ... 564s Setting up g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 564s Setting up libpng-dev:ppc64el (1.6.54-1) ... 564s Setting up libjpeg-dev:ppc64el (8c-2ubuntu11) ... 564s Setting up gcc (4:15.2.0-4ubuntu1) ... 564s Setting up gfortran-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 564s Setting up r-base-core (4.5.2-1ubuntu2) ... 564s Creating config file /etc/R/Renviron with new version 564s Setting up r-cran-crayon (1.5.3-1) ... 564s Setting up r-cran-lattice (0.22-9-1) ... 564s Setting up r-cran-xml (3.99-0.20-1) ... 564s Setting up r-cran-locfit (1.5-9.12-1) ... 564s Setting up r-cran-r6 (2.6.1-1) ... 564s Setting up g++-15 (15.2.0-12ubuntu1) ... 564s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 564s Setting up g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 564s Setting up r-cran-curl (7.0.0+dfsg-1) ... 564s Setting up r-bioc-biocgenerics (0.52.0-2) ... 564s Setting up r-cran-rlang (1.1.5-3) ... 564s Setting up r-cran-matrixstats (1.5.0-1) ... 564s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 564s Setting up r-cran-sys (3.4.3-1) ... 564s Setting up r-cran-plogr (0.2.0-3build2) ... 564s Setting up r-cran-mime (0.12-2) ... 564s Setting up r-cran-dbi (1.2.3-1build1) ... 564s Setting up r-cran-mass (7.3-65-1) ... 564s Setting up r-cran-gtools (3.9.5-1build1) ... 564s Setting up r-cran-glue (1.8.0-1) ... 564s Setting up r-cran-bit (4.6.0+dfsg-1) ... 564s Setting up r-cran-xtable (1:1.8-4-2build1) ... 564s Setting up r-cran-cli (3.6.4-1) ... 564s Setting up gfortran (4:15.2.0-4ubuntu1) ... 564s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 564s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 564s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 564s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 564s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ... 564s Setting up r-cran-bitops (1.0-9-1) ... 564s Setting up r-cran-bit64 (4.6.0-1-4) ... 564s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 564s Setting up r-cran-askpass (1.2.1-1) ... 564s Setting up r-cran-fastmap (1.2.0-1) ... 564s Setting up r-cran-png (0.1-8-1build2) ... 564s Setting up r-bioc-biobase (2.66.0-2) ... 564s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 564s Setting up r-cran-pkgconfig (2.0.3-2build2) ... 564s Setting up r-cran-cpp11 (0.5.3-1) ... 564s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ... 564s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 564s Setting up r-cran-matrix (1.7-4-1) ... 564s Setting up r-cran-kernsmooth (2.23-26-1build1) ... 564s Setting up g++ (4:15.2.0-4ubuntu1) ... 564s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 564s Setting up r-cran-cachem (1.1.0-1) ... 564s Setting up build-essential (12.12ubuntu2) ... 564s Setting up r-cran-catools (1.18.3-1) ... 564s Setting up r-bioc-iranges (2.40.1-3) ... 564s Setting up r-cran-gdata (3.0.1-1build1) ... 564s Setting up r-cran-vctrs (0.6.5-1) ... 564s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 564s Setting up r-base-dev (4.5.2-1ubuntu2) ... 564s Setting up r-cran-survival (3.8-6-1) ... 564s Setting up r-cran-httr (1.4.7+dfsg-1) ... 564s Setting up r-cran-memoise (2.0.1-1build1) ... 564s Setting up r-cran-blob (1.3.0-1) ... 564s Setting up pkg-r-autopkgtest (20250812) ... 564s Setting up r-bioc-xvector (0.46.0-2) ... 564s Setting up r-cran-gplots (3.3.0-1) ... 564s Setting up r-cran-rsqlite (2.3.9-1) ... 564s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 564s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 564s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 564s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 564s Setting up r-bioc-annotationdbi (1.68.0-2) ... 564s Setting up r-bioc-annotate (1.84.0+dfsg-2) ... 564s Setting up r-bioc-genefilter (1.88.0-2) ... 564s Setting up r-bioc-geneplotter (1.84.0+dfsg-2) ... 564s Setting up r-bioc-deseq (1.39.0-17) ... 564s Processing triggers for man-db (2.13.1-1build1) ... 564s Processing triggers for install-info (7.2-5) ... 564s Processing triggers for libc-bin (2.42-2ubuntu4) ... 565s autopkgtest [22:50:10]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 565s autopkgtest [22:50:10]: test pkg-r-autopkgtest: [----------------------- 565s Test: Try to load the R library DESeq 566s 566s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 566s Copyright (C) 2025 The R Foundation for Statistical Computing 566s Platform: powerpc64le-unknown-linux-gnu 566s 566s R is free software and comes with ABSOLUTELY NO WARRANTY. 566s You are welcome to redistribute it under certain conditions. 566s Type 'license()' or 'licence()' for distribution details. 566s 566s R is a collaborative project with many contributors. 566s Type 'contributors()' for more information and 566s 'citation()' on how to cite R or R packages in publications. 566s 566s Type 'demo()' for some demos, 'help()' for on-line help, or 566s 'help.start()' for an HTML browser interface to help. 566s Type 'q()' to quit R. 566s 566s > library('DESeq') 566s Loading required package: BiocGenerics 566s 566s Attaching package: ‘BiocGenerics’ 566s 566s The following objects are masked from ‘package:stats’: 566s 566s IQR, mad, sd, var, xtabs 566s 566s The following objects are masked from ‘package:base’: 566s 566s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 566s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 566s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 566s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 566s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 566s table, tapply, union, unique, unsplit, which.max, which.min 566s 566s Loading required package: Biobase 566s Welcome to Bioconductor 566s 566s Vignettes contain introductory material; view with 566s 'browseVignettes()'. To cite Bioconductor, see 566s 'citation("Biobase")', and for packages 'citation("pkgname")'. 566s 566s Loading required package: locfit 566s locfit 1.5-9.12 2025-03-05 566s Loading required package: lattice 570s Welcome to 'DESeq'. For improved performance, usability and 570s functionality, please consider migrating to 'DESeq2'. 570s > 570s find: ‘tests’: No such file or directory 570s autopkgtest [22:50:15]: test pkg-r-autopkgtest: -----------------------] 571s autopkgtest [22:50:16]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 571s pkg-r-autopkgtest PASS 571s autopkgtest [22:50:16]: @@@@@@@@@@@@@@@@@@@@ summary 571s pkg-r-autopkgtest PASS