0s autopkgtest [01:38:28]: starting date and time: 2025-10-22 01:38:28+0000 0s autopkgtest [01:38:28]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [01:38:28]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.s5ikiqct/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:python-pluggy --apt-upgrade python-ase --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.4.2-1 python-pluggy/1.6.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-ppc64el-5.secgroup --name adt-resolute-ppc64el-python-ase-20251022-013828-juju-7f2275-prod-proposed-migration-environment-15-78c90dd9-465f-4c60-92e9-29b8d2f31d63 --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-ppc64el-python-ase-20251022-013828-juju-7f2275-prod-proposed-migration-environment-15-78c90dd9-465f-4c60-92e9-29b8d2f31d63 from image adt/ubuntu-resolute-ppc64el-server-20251021.img (UUID c177abc7-cbc1-4b1f-967f-196ea722a402)... 56s autopkgtest [01:39:24]: testbed dpkg architecture: ppc64el 56s autopkgtest [01:39:24]: testbed apt version: 3.1.8ubuntu1 57s autopkgtest [01:39:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 57s autopkgtest [01:39:25]: testbed release detected to be: None 58s autopkgtest [01:39:26]: updating testbed package index (apt update) 58s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 58s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 58s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 58s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 58s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [599 kB] 59s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [15.0 kB] 59s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [57.6 kB] 59s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 59s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [121 kB] 59s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted ppc64el Packages [940 B] 59s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [397 kB] 59s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [4596 B] 59s Fetched 1283 kB in 1s (1182 kB/s) 60s Reading package lists... 60s Failed to check for VM: Permission denied 61s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 61s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 61s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 61s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 62s Reading package lists... 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 62s Calculating upgrade... 62s The following packages will be upgraded: 62s dracut-install 62s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 62s Need to get 49.5 kB of archives. 62s After this operation, 1024 B of additional disk space will be used. 62s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el dracut-install ppc64el 108-8ubuntu1 [49.5 kB] 62s dpkg-preconfigure: unable to re-open stdin: No such file or directory 63s Fetched 49.5 kB in 0s (172 kB/s) 63s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76480 files and directories currently installed.) 63s Preparing to unpack .../dracut-install_108-8ubuntu1_ppc64el.deb ... 63s Unpacking dracut-install (108-8ubuntu1) over (108-3ubuntu3) ... 63s Setting up dracut-install (108-8ubuntu1) ... 63s autopkgtest [01:39:31]: upgrading testbed (apt dist-upgrade and autopurge) 63s Reading package lists... 63s Building dependency tree... 63s Reading state information... 63s Calculating upgrade... 63s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 64s Reading package lists... 64s Building dependency tree... 64s Reading state information... 64s Solving dependencies... 64s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 67s autopkgtest [01:39:35]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:02:41 UTC 2025 67s autopkgtest [01:39:35]: @@@@@@@@@@@@@@@@@@@@ apt-source python-ase 70s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-ase 3.24.0-1 (dsc) [2638 B] 70s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-ase 3.24.0-1 (tar) [2597 kB] 70s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-ase 3.24.0-1 (diff) [10.3 kB] 70s gpgv: Signature made Thu Mar 6 03:39:08 2025 UTC 70s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 70s gpgv: Can't check signature: No public key 70s dpkg-source: warning: cannot verify inline signature for ./python-ase_3.24.0-1.dsc: no acceptable signature found 70s autopkgtest [01:39:38]: testing package python-ase version 3.24.0-1 71s autopkgtest [01:39:39]: build not needed 72s autopkgtest [01:39:40]: test command1: preparing testbed 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 72s Solving dependencies... 72s The following NEW packages will be installed: 72s ase blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 72s fonts-font-awesome fonts-glyphicons-halflings fonts-lyx libaec0 libblas3 72s libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 72s libharfbuzz0b libhdf5-310 libhdf5-hl-310 libimagequant0 libjbig0 72s libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery libjs-jquery-ui 72s liblapack3 liblcms2-2 liblerc4 libnetcdf22 libopenjp2-7 libqhull-r8.0 72s libraqm0 libsharpyuv0 libsymspg2 libsz2 libtcl8.6 libtiff6 libtk8.6 libwebp7 72s libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 libzopfli1 72s python-matplotlib-data python3-all python3-ase python3-brotli python3-cftime 72s python3-contourpy python3-cycler python3-dateutil python3-decorator 72s python3-fonttools python3-fs python3-iniconfig python3-kiwisolver 72s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-netcdf4 72s python3-numpy python3-numpy-dev python3-packaging python3-pil 72s python3-pil.imagetk python3-platformdirs python3-pluggy python3-pycodcif 72s python3-pytest python3-pytest-mock python3-scipy python3-spglib 72s python3-sympy python3-tk python3-ufolib2 python3-zopfli python3.13-tk 72s tk8.6-blt2.5 unicode-data x11-common 72s 0 upgraded, 84 newly installed, 0 to remove and 0 not upgraded. 72s Need to get 83.6 MB of archives. 72s After this operation, 355 MB of additional disk space will be used. 72s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-numpy-dev ppc64el 1:2.2.4+ds-1ubuntu1 [153 kB] 73s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas3 ppc64el 3.12.1-6build1 [291 kB] 73s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran5 ppc64el 15.2.0-5ubuntu1 [620 kB] 73s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack3 ppc64el 3.12.1-6build1 [2960 kB] 73s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-numpy ppc64el 1:2.2.4+ds-1ubuntu1 [4887 kB] 73s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 73s Get:7 http://ftpmaster.internal/ubuntu resolute/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 73s Get:8 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 73s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 73s Get:10 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 73s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-decorator all 5.2.1-2 [28.1 kB] 73s Get:12 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-scipy ppc64el 1.15.3-1 [18.2 MB] 74s Get:13 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsymspg2 ppc64el 2.6.0-3 [267 kB] 74s Get:14 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-spglib ppc64el 2.6.0-3 [32.1 kB] 74s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 74s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 74s Get:17 http://ftpmaster.internal/ubuntu resolute/universe ppc64el fonts-lyx all 2.4.4-1 [171 kB] 74s Get:18 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python-matplotlib-data all 3.10.1+dfsg1-4 [2930 kB] 74s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-dateutil all 2.9.0-4 [80.3 kB] 74s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-5ubuntu1 [169 kB] 74s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el libimagequant0 ppc64el 2.18.0-1build1 [43.2 kB] 74s Get:22 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-4ubuntu2 [215 kB] 74s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 74s Get:24 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblcms2-2 ppc64el 2.16-2 [243 kB] 74s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el libopenjp2-7 ppc64el 2.5.3-2.1 [251 kB] 74s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgraphite2-3 ppc64el 1.3.14-2ubuntu1 [84.6 kB] 74s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el libharfbuzz0b ppc64el 12.1.0-1 [679 kB] 74s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el libraqm0 ppc64el 0.10.3-1 [19.6 kB] 74s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate0 ppc64el 1.23-2 [63.3 kB] 74s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB] 74s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu1 [298 kB] 74s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1 [22.3 kB] 74s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebp7 ppc64el 1.5.0-0.1 [315 kB] 74s Get:34 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu3 [307 kB] 74s Get:35 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebpdemux2 ppc64el 1.5.0-0.1 [14.6 kB] 74s Get:36 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebpmux3 ppc64el 1.5.0-0.1 [31.1 kB] 74s Get:37 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-pil ppc64el 11.3.0-1ubuntu2 [654 kB] 74s Get:38 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtcl8.6 ppc64el 8.6.17+dfsg-1 [1239 kB] 74s Get:39 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig-config ppc64el 2.15.0-2.3ubuntu1 [38.1 kB] 74s Get:40 http://ftpmaster.internal/ubuntu resolute/main ppc64el libfontconfig1 ppc64el 2.15.0-2.3ubuntu1 [188 kB] 74s Get:41 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxrender1 ppc64el 1:0.9.12-1 [23.0 kB] 74s Get:42 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB] 74s Get:43 http://ftpmaster.internal/ubuntu resolute/main ppc64el x11-common all 1:7.7+24ubuntu1 [22.4 kB] 74s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B] 74s Get:45 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtk8.6 ppc64el 8.6.17-1 [968 kB] 74s Get:46 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3.13-tk ppc64el 3.13.9-1 [108 kB] 74s Get:47 http://ftpmaster.internal/ubuntu resolute/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-8 [778 kB] 74s Get:48 http://ftpmaster.internal/ubuntu resolute/main ppc64el blt ppc64el 2.5.3+dfsg-8 [4830 B] 74s Get:49 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-tk ppc64el 3.13.5-1 [9916 B] 74s Get:50 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pil.imagetk ppc64el 11.3.0-1ubuntu2 [10.3 kB] 74s Get:51 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-contourpy ppc64el 1.3.1-1build1 [218 kB] 74s Get:52 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-cycler all 0.12.1-2 [9850 B] 74s Get:53 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-brotli ppc64el 1.1.0-2build6 [430 kB] 74s Get:54 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-platformdirs all 4.3.7-1 [16.9 kB] 74s Get:55 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-fs all 2.4.16-7 [90.8 kB] 74s Get:56 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxslt1.1 ppc64el 1.1.43-0.1 [189 kB] 74s Get:57 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-lxml ppc64el 6.0.1-1build1 [2449 kB] 75s Get:58 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-lz4 ppc64el 4.4.4+dfsg-3 [28.9 kB] 75s Get:59 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-mpmath all 1.3.0-1 [425 kB] 75s Get:60 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-sympy all 1.13.3-5 [4229 kB] 75s Get:61 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-ufolib2 all 0.17.1+dfsg1-1 [33.5 kB] 75s Get:62 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-all ppc64el 3.13.7-1 [884 B] 75s Get:63 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libzopfli1 ppc64el 1.0.3-3 [160 kB] 75s Get:64 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-zopfli ppc64el 0.2.3.post1-1 [10.9 kB] 75s Get:65 http://ftpmaster.internal/ubuntu resolute/universe ppc64el unicode-data all 16.0.0-1 [9513 kB] 75s Get:66 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-fonttools ppc64el 4.57.0-2build1 [1745 kB] 75s Get:67 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-kiwisolver ppc64el 1.4.7-3build2 [71.7 kB] 75s Get:68 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-packaging all 25.0-1 [52.8 kB] 75s Get:69 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6build1 [225 kB] 75s Get:70 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-matplotlib ppc64el 3.10.1+dfsg1-4 [18.1 MB] 75s Get:71 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-ase all 3.24.0-1 [1787 kB] 75s Get:72 http://ftpmaster.internal/ubuntu resolute/universe ppc64el ase all 3.24.0-1 [31.1 kB] 75s Get:73 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 75s Get:74 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 75s Get:75 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-310 ppc64el 1.14.5+repack-3build1 [1516 kB] 76s Get:76 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-hl-310 ppc64el 1.14.5+repack-3build1 [74.6 kB] 76s Get:77 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libnetcdf22 ppc64el 1:4.9.3-1build1 [690 kB] 76s Get:78 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-cftime ppc64el 1.6.4-2build1 [320 kB] 76s Get:79 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 76s Get:80 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-netcdf4 ppc64el 1.7.2-1build4 [640 kB] 76s Get:81 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pluggy all 1.6.0-1 [21.0 kB] 76s Get:82 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pycodcif ppc64el 3.11.0+dfsg-1 [76.4 kB] 76s Get:83 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el python3-pytest all 8.4.2-1 [268 kB] 76s Get:84 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pytest-mock all 3.14.0-3 [11.8 kB] 76s Fetched 83.6 MB in 3s (24.8 MB/s) 76s Selecting previously unselected package python3-numpy-dev:ppc64el. 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76480 files and directories currently installed.) 76s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_ppc64el.deb ... 76s Unpacking python3-numpy-dev:ppc64el (1:2.2.4+ds-1ubuntu1) ... 76s Selecting previously unselected package libblas3:ppc64el. 76s Preparing to unpack .../01-libblas3_3.12.1-6build1_ppc64el.deb ... 76s Unpacking libblas3:ppc64el (3.12.1-6build1) ... 76s Selecting previously unselected package libgfortran5:ppc64el. 76s Preparing to unpack .../02-libgfortran5_15.2.0-5ubuntu1_ppc64el.deb ... 76s Unpacking libgfortran5:ppc64el (15.2.0-5ubuntu1) ... 76s Selecting previously unselected package liblapack3:ppc64el. 76s Preparing to unpack .../03-liblapack3_3.12.1-6build1_ppc64el.deb ... 76s Unpacking liblapack3:ppc64el (3.12.1-6build1) ... 76s Selecting previously unselected package python3-numpy. 76s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_ppc64el.deb ... 76s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 76s Selecting previously unselected package fonts-font-awesome. 76s Preparing to unpack .../05-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 76s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 76s Selecting previously unselected package fonts-glyphicons-halflings. 76s Preparing to unpack .../06-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 76s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 76s Selecting previously unselected package libjs-bootstrap. 76s Preparing to unpack .../07-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 76s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 76s Selecting previously unselected package libjs-jquery. 76s Preparing to unpack .../08-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 76s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 76s Selecting previously unselected package libjs-jquery-ui. 76s Preparing to unpack .../09-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 76s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 76s Selecting previously unselected package python3-decorator. 76s Preparing to unpack .../10-python3-decorator_5.2.1-2_all.deb ... 76s Unpacking python3-decorator (5.2.1-2) ... 76s Selecting previously unselected package python3-scipy. 76s Preparing to unpack .../11-python3-scipy_1.15.3-1_ppc64el.deb ... 76s Unpacking python3-scipy (1.15.3-1) ... 77s Selecting previously unselected package libsymspg2:ppc64el. 77s Preparing to unpack .../12-libsymspg2_2.6.0-3_ppc64el.deb ... 77s Unpacking libsymspg2:ppc64el (2.6.0-3) ... 77s Selecting previously unselected package python3-spglib. 77s Preparing to unpack .../13-python3-spglib_2.6.0-3_ppc64el.deb ... 77s Unpacking python3-spglib (2.6.0-3) ... 77s Selecting previously unselected package fonts-dejavu-mono. 77s Preparing to unpack .../14-fonts-dejavu-mono_2.37-8_all.deb ... 77s Unpacking fonts-dejavu-mono (2.37-8) ... 77s Selecting previously unselected package fonts-dejavu-core. 77s Preparing to unpack .../15-fonts-dejavu-core_2.37-8_all.deb ... 77s Unpacking fonts-dejavu-core (2.37-8) ... 77s Selecting previously unselected package fonts-lyx. 77s Preparing to unpack .../16-fonts-lyx_2.4.4-1_all.deb ... 77s Unpacking fonts-lyx (2.4.4-1) ... 77s Selecting previously unselected package python-matplotlib-data. 77s Preparing to unpack .../17-python-matplotlib-data_3.10.1+dfsg1-4_all.deb ... 77s Unpacking python-matplotlib-data (3.10.1+dfsg1-4) ... 77s Selecting previously unselected package python3-dateutil. 77s Preparing to unpack .../18-python3-dateutil_2.9.0-4_all.deb ... 77s Unpacking python3-dateutil (2.9.0-4) ... 77s Selecting previously unselected package libgomp1:ppc64el. 77s Preparing to unpack .../19-libgomp1_15.2.0-5ubuntu1_ppc64el.deb ... 77s Unpacking libgomp1:ppc64el (15.2.0-5ubuntu1) ... 77s Selecting previously unselected package libimagequant0:ppc64el. 77s Preparing to unpack .../20-libimagequant0_2.18.0-1build1_ppc64el.deb ... 77s Unpacking libimagequant0:ppc64el (2.18.0-1build1) ... 77s Selecting previously unselected package libjpeg-turbo8:ppc64el. 77s Preparing to unpack .../21-libjpeg-turbo8_2.1.5-4ubuntu2_ppc64el.deb ... 77s Unpacking libjpeg-turbo8:ppc64el (2.1.5-4ubuntu2) ... 77s Selecting previously unselected package libjpeg8:ppc64el. 77s Preparing to unpack .../22-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 77s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 77s Selecting previously unselected package liblcms2-2:ppc64el. 77s Preparing to unpack .../23-liblcms2-2_2.16-2_ppc64el.deb ... 77s Unpacking liblcms2-2:ppc64el (2.16-2) ... 77s Selecting previously unselected package libopenjp2-7:ppc64el. 77s Preparing to unpack .../24-libopenjp2-7_2.5.3-2.1_ppc64el.deb ... 77s Unpacking libopenjp2-7:ppc64el (2.5.3-2.1) ... 77s Selecting previously unselected package libgraphite2-3:ppc64el. 77s Preparing to unpack .../25-libgraphite2-3_1.3.14-2ubuntu1_ppc64el.deb ... 77s Unpacking libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 77s Selecting previously unselected package libharfbuzz0b:ppc64el. 77s Preparing to unpack .../26-libharfbuzz0b_12.1.0-1_ppc64el.deb ... 77s Unpacking libharfbuzz0b:ppc64el (12.1.0-1) ... 77s Selecting previously unselected package libraqm0:ppc64el. 77s Preparing to unpack .../27-libraqm0_0.10.3-1_ppc64el.deb ... 77s Unpacking libraqm0:ppc64el (0.10.3-1) ... 77s Selecting previously unselected package libdeflate0:ppc64el. 77s Preparing to unpack .../28-libdeflate0_1.23-2_ppc64el.deb ... 77s Unpacking libdeflate0:ppc64el (1.23-2) ... 77s Selecting previously unselected package libjbig0:ppc64el. 77s Preparing to unpack .../29-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ... 77s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ... 77s Selecting previously unselected package liblerc4:ppc64el. 77s Preparing to unpack .../30-liblerc4_4.0.0+ds-5ubuntu1_ppc64el.deb ... 77s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ... 77s Selecting previously unselected package libsharpyuv0:ppc64el. 77s Preparing to unpack .../31-libsharpyuv0_1.5.0-0.1_ppc64el.deb ... 77s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1) ... 77s Selecting previously unselected package libwebp7:ppc64el. 77s Preparing to unpack .../32-libwebp7_1.5.0-0.1_ppc64el.deb ... 77s Unpacking libwebp7:ppc64el (1.5.0-0.1) ... 77s Selecting previously unselected package libtiff6:ppc64el. 77s Preparing to unpack .../33-libtiff6_4.7.0-3ubuntu3_ppc64el.deb ... 77s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu3) ... 77s Selecting previously unselected package libwebpdemux2:ppc64el. 77s Preparing to unpack .../34-libwebpdemux2_1.5.0-0.1_ppc64el.deb ... 77s Unpacking libwebpdemux2:ppc64el (1.5.0-0.1) ... 77s Selecting previously unselected package libwebpmux3:ppc64el. 77s Preparing to unpack .../35-libwebpmux3_1.5.0-0.1_ppc64el.deb ... 77s Unpacking libwebpmux3:ppc64el (1.5.0-0.1) ... 77s Selecting previously unselected package python3-pil:ppc64el. 77s Preparing to unpack .../36-python3-pil_11.3.0-1ubuntu2_ppc64el.deb ... 77s Unpacking python3-pil:ppc64el (11.3.0-1ubuntu2) ... 77s Selecting previously unselected package libtcl8.6:ppc64el. 77s Preparing to unpack .../37-libtcl8.6_8.6.17+dfsg-1_ppc64el.deb ... 77s Unpacking libtcl8.6:ppc64el (8.6.17+dfsg-1) ... 77s Selecting previously unselected package fontconfig-config. 77s Preparing to unpack .../38-fontconfig-config_2.15.0-2.3ubuntu1_ppc64el.deb ... 78s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 78s Selecting previously unselected package libfontconfig1:ppc64el. 78s Preparing to unpack .../39-libfontconfig1_2.15.0-2.3ubuntu1_ppc64el.deb ... 78s Unpacking libfontconfig1:ppc64el (2.15.0-2.3ubuntu1) ... 78s Selecting previously unselected package libxrender1:ppc64el. 78s Preparing to unpack .../40-libxrender1_1%3a0.9.12-1_ppc64el.deb ... 78s Unpacking libxrender1:ppc64el (1:0.9.12-1) ... 78s Selecting previously unselected package libxft2:ppc64el. 78s Preparing to unpack .../41-libxft2_2.3.6-1build1_ppc64el.deb ... 78s Unpacking libxft2:ppc64el (2.3.6-1build1) ... 78s Selecting previously unselected package x11-common. 78s Preparing to unpack .../42-x11-common_1%3a7.7+24ubuntu1_all.deb ... 78s Unpacking x11-common (1:7.7+24ubuntu1) ... 78s Selecting previously unselected package libxss1:ppc64el. 78s Preparing to unpack .../43-libxss1_1%3a1.2.3-1build3_ppc64el.deb ... 78s Unpacking libxss1:ppc64el (1:1.2.3-1build3) ... 78s Selecting previously unselected package libtk8.6:ppc64el. 78s Preparing to unpack .../44-libtk8.6_8.6.17-1_ppc64el.deb ... 78s Unpacking libtk8.6:ppc64el (8.6.17-1) ... 78s Selecting previously unselected package python3.13-tk. 78s Preparing to unpack .../45-python3.13-tk_3.13.9-1_ppc64el.deb ... 78s Unpacking python3.13-tk (3.13.9-1) ... 78s Selecting previously unselected package tk8.6-blt2.5. 78s Preparing to unpack .../46-tk8.6-blt2.5_2.5.3+dfsg-8_ppc64el.deb ... 78s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 78s Selecting previously unselected package blt. 78s Preparing to unpack .../47-blt_2.5.3+dfsg-8_ppc64el.deb ... 78s Unpacking blt (2.5.3+dfsg-8) ... 78s Selecting previously unselected package python3-tk:ppc64el. 78s Preparing to unpack .../48-python3-tk_3.13.5-1_ppc64el.deb ... 78s Unpacking python3-tk:ppc64el (3.13.5-1) ... 78s Selecting previously unselected package python3-pil.imagetk:ppc64el. 78s Preparing to unpack .../49-python3-pil.imagetk_11.3.0-1ubuntu2_ppc64el.deb ... 78s Unpacking python3-pil.imagetk:ppc64el (11.3.0-1ubuntu2) ... 78s Selecting previously unselected package python3-contourpy. 78s Preparing to unpack .../50-python3-contourpy_1.3.1-1build1_ppc64el.deb ... 78s Unpacking python3-contourpy (1.3.1-1build1) ... 78s Selecting previously unselected package python3-cycler. 78s Preparing to unpack .../51-python3-cycler_0.12.1-2_all.deb ... 78s Unpacking python3-cycler (0.12.1-2) ... 78s Selecting previously unselected package python3-brotli. 78s Preparing to unpack .../52-python3-brotli_1.1.0-2build6_ppc64el.deb ... 78s Unpacking python3-brotli (1.1.0-2build6) ... 78s Selecting previously unselected package python3-platformdirs. 78s Preparing to unpack .../53-python3-platformdirs_4.3.7-1_all.deb ... 78s Unpacking python3-platformdirs (4.3.7-1) ... 78s Selecting previously unselected package python3-fs. 78s Preparing to unpack .../54-python3-fs_2.4.16-7_all.deb ... 78s Unpacking python3-fs (2.4.16-7) ... 78s Selecting previously unselected package libxslt1.1:ppc64el. 78s Preparing to unpack .../55-libxslt1.1_1.1.43-0.1_ppc64el.deb ... 78s Unpacking libxslt1.1:ppc64el (1.1.43-0.1) ... 78s Selecting previously unselected package python3-lxml:ppc64el. 78s Preparing to unpack .../56-python3-lxml_6.0.1-1build1_ppc64el.deb ... 78s Unpacking python3-lxml:ppc64el (6.0.1-1build1) ... 78s Selecting previously unselected package python3-lz4. 78s Preparing to unpack .../57-python3-lz4_4.4.4+dfsg-3_ppc64el.deb ... 78s Unpacking python3-lz4 (4.4.4+dfsg-3) ... 78s Selecting previously unselected package python3-mpmath. 78s Preparing to unpack .../58-python3-mpmath_1.3.0-1_all.deb ... 78s Unpacking python3-mpmath (1.3.0-1) ... 78s Selecting previously unselected package python3-sympy. 78s Preparing to unpack .../59-python3-sympy_1.13.3-5_all.deb ... 78s Unpacking python3-sympy (1.13.3-5) ... 78s Selecting previously unselected package python3-ufolib2. 78s Preparing to unpack .../60-python3-ufolib2_0.17.1+dfsg1-1_all.deb ... 78s Unpacking python3-ufolib2 (0.17.1+dfsg1-1) ... 78s Selecting previously unselected package python3-all. 78s Preparing to unpack .../61-python3-all_3.13.7-1_ppc64el.deb ... 78s Unpacking python3-all (3.13.7-1) ... 78s Selecting previously unselected package libzopfli1. 78s Preparing to unpack .../62-libzopfli1_1.0.3-3_ppc64el.deb ... 78s Unpacking libzopfli1 (1.0.3-3) ... 78s Selecting previously unselected package python3-zopfli. 78s Preparing to unpack .../63-python3-zopfli_0.2.3.post1-1_ppc64el.deb ... 78s Unpacking python3-zopfli (0.2.3.post1-1) ... 78s Selecting previously unselected package unicode-data. 78s Preparing to unpack .../64-unicode-data_16.0.0-1_all.deb ... 78s Unpacking unicode-data (16.0.0-1) ... 79s Selecting previously unselected package python3-fonttools. 79s Preparing to unpack .../65-python3-fonttools_4.57.0-2build1_ppc64el.deb ... 79s Unpacking python3-fonttools (4.57.0-2build1) ... 79s Selecting previously unselected package python3-kiwisolver. 79s Preparing to unpack .../66-python3-kiwisolver_1.4.7-3build2_ppc64el.deb ... 79s Unpacking python3-kiwisolver (1.4.7-3build2) ... 79s Selecting previously unselected package python3-packaging. 79s Preparing to unpack .../67-python3-packaging_25.0-1_all.deb ... 79s Unpacking python3-packaging (25.0-1) ... 79s Selecting previously unselected package libqhull-r8.0:ppc64el. 79s Preparing to unpack .../68-libqhull-r8.0_2020.2-6build1_ppc64el.deb ... 79s Unpacking libqhull-r8.0:ppc64el (2020.2-6build1) ... 79s Selecting previously unselected package python3-matplotlib. 79s Preparing to unpack .../69-python3-matplotlib_3.10.1+dfsg1-4_ppc64el.deb ... 79s Unpacking python3-matplotlib (3.10.1+dfsg1-4) ... 79s Selecting previously unselected package python3-ase. 79s Preparing to unpack .../70-python3-ase_3.24.0-1_all.deb ... 79s Unpacking python3-ase (3.24.0-1) ... 79s Selecting previously unselected package ase. 79s Preparing to unpack .../71-ase_3.24.0-1_all.deb ... 79s Unpacking ase (3.24.0-1) ... 79s Selecting previously unselected package libaec0:ppc64el. 79s Preparing to unpack .../72-libaec0_1.1.3-1_ppc64el.deb ... 79s Unpacking libaec0:ppc64el (1.1.3-1) ... 79s Selecting previously unselected package libsz2:ppc64el. 79s Preparing to unpack .../73-libsz2_1.1.3-1_ppc64el.deb ... 79s Unpacking libsz2:ppc64el (1.1.3-1) ... 79s Selecting previously unselected package libhdf5-310:ppc64el. 79s Preparing to unpack .../74-libhdf5-310_1.14.5+repack-3build1_ppc64el.deb ... 79s Unpacking libhdf5-310:ppc64el (1.14.5+repack-3build1) ... 80s Selecting previously unselected package libhdf5-hl-310:ppc64el. 80s Preparing to unpack .../75-libhdf5-hl-310_1.14.5+repack-3build1_ppc64el.deb ... 80s Unpacking libhdf5-hl-310:ppc64el (1.14.5+repack-3build1) ... 80s Selecting previously unselected package libnetcdf22:ppc64el. 80s Preparing to unpack .../76-libnetcdf22_1%3a4.9.3-1build1_ppc64el.deb ... 80s Unpacking libnetcdf22:ppc64el (1:4.9.3-1build1) ... 80s Selecting previously unselected package python3-cftime. 80s Preparing to unpack .../77-python3-cftime_1.6.4-2build1_ppc64el.deb ... 80s Unpacking python3-cftime (1.6.4-2build1) ... 80s Selecting previously unselected package python3-iniconfig. 80s Preparing to unpack .../78-python3-iniconfig_1.1.1-2_all.deb ... 80s Unpacking python3-iniconfig (1.1.1-2) ... 80s Selecting previously unselected package python3-netcdf4. 80s Preparing to unpack .../79-python3-netcdf4_1.7.2-1build4_ppc64el.deb ... 80s Unpacking python3-netcdf4 (1.7.2-1build4) ... 80s Selecting previously unselected package python3-pluggy. 80s Preparing to unpack .../80-python3-pluggy_1.6.0-1_all.deb ... 80s Unpacking python3-pluggy (1.6.0-1) ... 80s Selecting previously unselected package python3-pycodcif. 80s Preparing to unpack .../81-python3-pycodcif_3.11.0+dfsg-1_ppc64el.deb ... 80s Unpacking python3-pycodcif (3.11.0+dfsg-1) ... 80s Selecting previously unselected package python3-pytest. 80s Preparing to unpack .../82-python3-pytest_8.4.2-1_all.deb ... 80s Unpacking python3-pytest (8.4.2-1) ... 80s Selecting previously unselected package python3-pytest-mock. 80s Preparing to unpack .../83-python3-pytest-mock_3.14.0-3_all.deb ... 80s Unpacking python3-pytest-mock (3.14.0-3) ... 80s Setting up libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 80s Setting up liblcms2-2:ppc64el (2.16-2) ... 80s Setting up python3-iniconfig (1.1.1-2) ... 80s Setting up libsharpyuv0:ppc64el (1.5.0-0.1) ... 80s Setting up liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ... 80s Setting up libxrender1:ppc64el (1:0.9.12-1) ... 80s Setting up python3-lz4 (4.4.4+dfsg-3) ... 80s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 80s Setting up fonts-lyx (2.4.4-1) ... 80s Setting up x11-common (1:7.7+24ubuntu1) ... 80s Setting up libdeflate0:ppc64el (1.23-2) ... 80s Setting up libqhull-r8.0:ppc64el (2020.2-6build1) ... 80s Setting up python3-all (3.13.7-1) ... 80s Setting up python3-pycodcif (3.11.0+dfsg-1) ... 80s Setting up libgomp1:ppc64el (15.2.0-5ubuntu1) ... 80s Setting up libjbig0:ppc64el (2.1-6.1ubuntu2) ... 80s Setting up libaec0:ppc64el (1.1.3-1) ... 80s Setting up python3-platformdirs (4.3.7-1) ... 81s Setting up python3-fs (2.4.16-7) ... 81s Setting up unicode-data (16.0.0-1) ... 81s Setting up libsymspg2:ppc64el (2.6.0-3) ... 81s Setting up python3-decorator (5.2.1-2) ... 81s Setting up libblas3:ppc64el (3.12.1-6build1) ... 81s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 81s Setting up python3-packaging (25.0-1) ... 81s Setting up libzopfli1 (1.0.3-3) ... 81s Setting up python3-brotli (1.1.0-2build6) ... 81s Setting up python3-cycler (0.12.1-2) ... 81s Setting up libimagequant0:ppc64el (2.18.0-1build1) ... 81s Setting up fonts-dejavu-mono (2.37-8) ... 81s Setting up python3-kiwisolver (1.4.7-3build2) ... 81s Setting up python3-numpy-dev:ppc64el (1:2.2.4+ds-1ubuntu1) ... 81s Setting up libtcl8.6:ppc64el (8.6.17+dfsg-1) ... 81s Setting up fonts-dejavu-core (2.37-8) ... 81s Setting up libjpeg-turbo8:ppc64el (2.1.5-4ubuntu2) ... 81s Setting up libgfortran5:ppc64el (15.2.0-5ubuntu1) ... 81s Setting up python3-pluggy (1.6.0-1) ... 81s Setting up libwebp7:ppc64el (1.5.0-0.1) ... 81s Setting up libxslt1.1:ppc64el (1.1.43-0.1) ... 81s Setting up libopenjp2-7:ppc64el (2.5.3-2.1) ... 81s Setting up libharfbuzz0b:ppc64el (12.1.0-1) ... 81s Setting up python3-dateutil (2.9.0-4) ... 81s Setting up libxss1:ppc64el (1:1.2.3-1build3) ... 81s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 81s Setting up python3-mpmath (1.3.0-1) ... 82s Setting up python-matplotlib-data (3.10.1+dfsg1-4) ... 82s Setting up libwebpmux3:ppc64el (1.5.0-0.1) ... 82s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 82s Setting up libsz2:ppc64el (1.1.3-1) ... 82s Setting up libjs-bootstrap (3.4.1+dfsg-6) ... 82s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 82s Setting up python3-sympy (1.13.3-5) ... 88s Setting up liblapack3:ppc64el (3.12.1-6build1) ... 88s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 88s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 88s Setting up python3-pytest (8.4.2-1) ... 88s Setting up libwebpdemux2:ppc64el (1.5.0-0.1) ... 88s Setting up python3-zopfli (0.2.3.post1-1) ... 89s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 89s Setting up libraqm0:ppc64el (0.10.3-1) ... 89s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 90s Setting up libhdf5-310:ppc64el (1.14.5+repack-3build1) ... 90s Setting up python3-pytest-mock (3.14.0-3) ... 90s Setting up python3-lxml:ppc64el (6.0.1-1build1) ... 91s Setting up libtiff6:ppc64el (4.7.0-3ubuntu3) ... 91s Setting up python3-contourpy (1.3.1-1build1) ... 91s Setting up libfontconfig1:ppc64el (2.15.0-2.3ubuntu1) ... 91s Setting up python3-spglib (2.6.0-3) ... 91s Setting up libhdf5-hl-310:ppc64el (1.14.5+repack-3build1) ... 91s Setting up libxft2:ppc64el (2.3.6-1build1) ... 91s Setting up python3-scipy (1.15.3-1) ... 95s Setting up libtk8.6:ppc64el (8.6.17-1) ... 95s Setting up libnetcdf22:ppc64el (1:4.9.3-1build1) ... 95s Setting up python3.13-tk (3.13.9-1) ... 95s Setting up python3-pil:ppc64el (11.3.0-1ubuntu2) ... 95s Setting up python3-cftime (1.6.4-2build1) ... 95s Setting up python3-netcdf4 (1.7.2-1build4) ... 95s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 95s Setting up blt (2.5.3+dfsg-8) ... 95s Setting up python3-tk:ppc64el (3.13.5-1) ... 95s Setting up python3-pil.imagetk:ppc64el (11.3.0-1ubuntu2) ... 95s Setting up python3-fonttools (4.57.0-2build1) ... 97s Setting up python3-ufolib2 (0.17.1+dfsg1-1) ... 97s Setting up python3-matplotlib (3.10.1+dfsg1-4) ... 98s Setting up python3-ase (3.24.0-1) ... 100s Setting up ase (3.24.0-1) ... 100s Processing triggers for libc-bin (2.42-0ubuntu3) ... 100s Processing triggers for man-db (2.13.1-1) ... 102s autopkgtest [01:40:10]: test command1: for py in $(py3versions -s); do cd "$AUTOPKGTEST_TMP"; $py -m ase test --pytest -p no:cacheprovider; done 102s autopkgtest [01:40:10]: test command1: [----------------------- 102s About to run pytest with these parameters: 102s -p 102s no:cacheprovider 109s ============================= test session starts ============================== 109s platform linux -- Python 3.13.9, pytest-8.4.2, pluggy-1.6.0 109s 109s Libraries 109s ========= 109s 109s ase-3.24.0 /usr/lib/python3/dist-packages/ase 109s numpy-2.2.4 /usr/lib/python3/dist-packages/numpy 109s scipy-1.15.3 /usr/lib/python3/dist-packages/scipy 109s matplotlib-3.10.1+dfsg1 /usr/lib/python3/dist-packages/matplotlib 109s spglib-2.6.0 /usr/lib/python3/dist-packages/spglib 109s ase_ext not installed 109s flask not installed 109s psycopg2 not installed 109s pyamg not installed 109s 109s 109s Calculators 109s =========== 109s Config: No configuration file specified 109s Datafiles: ase-datafiles package not installed 109s 109s [ ] abinit not installed: 'abinit' 109s [ ] ace cfg= 109s [ ] aims not installed: 'aims' 109s [ ] amber cfg= 109s [ ] asap not installed: asap3 109s [ ] castep not installed: 'castep' 109s [ ] cp2k not installed: 'cp2k' 109s [ ] crystal cfg= 109s [ ] demon cfg= 109s [ ] demonnano cfg= 109s [ ] dftb not installed: No 'dftb' section 109s [ ] dftd3 not installed: 'dftd3' 109s [ ] dmol cfg= 109s [ ] elk not installed: No 'elk' section 109s [ ] espresso not installed: 'espresso' 109s [ ] exciting not installed: 'exciting' 109s [ ] gamess_us cfg= 109s [ ] gaussian cfg= 109s [ ] gpaw not installed: gpaw 109s [ ] gromacs not installed: 'gromacs' 109s [ ] gulp cfg= 109s [ ] hotbit cfg= 109s [ ] lammpslib not installed: missing python wrappers: cannot import lammps 109s [ ] lammpsrun not installed: 'lammps' 109s [ ] mopac not installed: No 'mopac' section 109s [ ] nwchem not installed: No 'nwchem' section 109s [ ] octopus not installed: 'octopus' 109s [ ] onetep cfg= 109s [ ] openmx not installed: 'openmx' 109s [ ] orca not installed: 'orca' 109s [ ] plumed not installed: 109s [ ] psi4 not installed: psi4 109s [ ] qchem cfg= 109s [ ] siesta not installed: No 'siesta' section 109s [ ] turbomole cfg= 109s [ ] vasp not installed: 'vasp' 109s 109s * Use --calculators option to select calculators. 109s 109s * See "ase test --help-calculators" on how to configure calculators. 109s 109s * This listing only includes external calculators known by the test 109s system. Others are "configured" by setting an environment variable 109s like "ASE_xxx_COMMAND" in order to allow tests to run. Please see 109s the documentation of that individual calculator. 109s 109s 109s rootdir: /usr/lib/python3/dist-packages/ase/test 109s configfile: pytest.ini 109s plugins: mock-3.14.0, typeguard-4.4.2 109s collected 3522 items 109s 109s atoms/test_atom.py .. [ 0%] 109s atoms/test_atom_scaled_pos.py ... [ 0%] 109s atoms/test_atoms.py .............. [ 0%] 109s atoms/test_atoms_angle.py . [ 0%] 109s atoms/test_atoms_distance.py .. [ 0%] 109s atoms/test_atoms_formula.py . [ 0%] 109s atoms/test_atoms_get_duplicates.py . [ 0%] 109s atoms/test_atoms_get_positions.py ... [ 0%] 109s atoms/test_atoms_getitem.py ............. [ 1%] 109s atoms/test_atoms_indices.py . [ 1%] 109s atoms/test_atoms_info_copy.py . [ 1%] 109s atoms/test_atoms_instantiation.py .... [ 1%] 109s atoms/test_build.py . [ 1%] 109s atoms/test_center.py ........... [ 1%] 109s atoms/test_center_nonperiodic.py . [ 1%] 109s atoms/test_compare_atoms.py . [ 1%] 109s atoms/test_deprecated_get_set.py ... [ 1%] 109s atoms/test_get_angles.py . [ 1%] 109s atoms/test_h2.py . [ 1%] 109s atoms/test_mic.py . [ 1%] 109s atoms/test_momenta_velocities.py ... [ 1%] 109s atoms/test_permute_axes.py . [ 1%] 109s atoms/test_rotate.py . [ 2%] 109s atoms/test_rotate_euler.py . [ 2%] 109s atoms/test_scaled_positions.py . [ 2%] 109s atoms/test_set_get_angle.py . [ 2%] 109s bandstructure/test_bandpath.py ....... [ 2%] 109s bandstructure/test_bandstructure.py ... [ 2%] 109s bandstructure/test_bandstructure_json.py . [ 2%] 113s bandstructure/test_bandstructure_many.py ....................... [ 3%] 113s bandstructure/test_bandstructure_transform_mcl.py . [ 3%] 113s bandstructure/test_resolve_custom_kpoints.py ..... [ 3%] 113s bravais/test_2d_cell_pbc.py ..... [ 3%] 114s bravais/test_bravais_type_engine.py ................. [ 3%] 114s bravais/test_eps.py .. [ 3%] 114s bravais/test_hex.py . [ 3%] 114s bravais/test_lattices.py ............................................... [ 5%] 114s .. [ 5%] 114s bravais/test_line_lattice.py . [ 5%] 114s bravais/test_main.py ......................... [ 6%] 115s bravais/test_orcc_mcl.py . [ 6%] 115s bravais/test_reduce.py . [ 6%] 115s bravais/test_standard_form.py ....................... [ 6%] 115s build_/test_attach.py .... [ 6%] 115s build_/test_build_bulk.py .............................................. [ 8%] 115s ........................................................................ [ 10%] 116s ........................................................................ [ 12%] 116s .................................................. [ 13%] 116s build_/test_bulk.py .......... [ 13%] 116s build_/test_connected.py .... [ 14%] 116s build_/test_minimize_rotation_and_translation.py .. [ 14%] 117s build_/test_supercells.py .............................................. [ 15%] 120s .............. [ 15%] 120s build_/test_surface.py ... [ 15%] 120s build_/test_surface_stack.py . [ 15%] 120s build_/test_surface_terminations.py . [ 16%] 120s calculator/abinit/test_abinit_cmdline.py s [ 16%] 120s calculator/abinit/test_main.py sssssssss [ 16%] 120s calculator/ace/test_ace.py s [ 16%] 120s calculator/ace/test_ace_calculator.py . [ 16%] 120s calculator/aims/test_H2O_aims.py s [ 16%] 120s calculator/aims/test_aims_interface.py s [ 16%] 120s calculator/aims/test_version.py . [ 16%] 120s calculator/amber/test_amber.py s [ 16%] 120s calculator/castep/test_castep_interface.py ........ [ 16%] 120s calculator/cp2k/test_cp2k_H2_None.py s [ 16%] 120s calculator/cp2k/test_cp2k_dcd.py s [ 16%] 120s calculator/cp2k/test_cp2k_many.py ssssssssssss [ 17%] 120s calculator/cp2k/test_cp2k_restart.py . [ 17%] 120s calculator/cp2k/test_cp2k_stress.py s [ 17%] 120s calculator/crystal/test_bulk.py s [ 17%] 120s calculator/crystal/test_graphene.py s [ 17%] 120s calculator/crystal/test_molecule.py s [ 17%] 120s calculator/demon/test_h2o.py s [ 17%] 120s calculator/demon/test_h2o_xas_xes.py s [ 17%] 120s calculator/demonnano/test_h2o.py s [ 17%] 120s calculator/dftb/test_dftb_bandstructure.py s [ 17%] 120s calculator/dftb/test_dftb_relax_bulk.py .s [ 17%] 120s calculator/dftb/test_dftb_relax_dimer.py s [ 17%] 120s calculator/dftb/test_dftb_relax_surface.py s [ 17%] 120s calculator/dftb/test_dipole.py s [ 17%] 120s calculator/dftb/test_xtb_static.py s [ 17%] 120s calculator/dmol/test_Al_dmol.py s [ 17%] 120s calculator/dmol/test_water_dmol.py s [ 17%] 120s calculator/elk/test_elk.py ss [ 17%] 120s calculator/espresso/test_espresso.py ..ssss.. [ 17%] 120s calculator/exciting/test_exciting.py sssss [ 18%] 120s calculator/exciting/test_runner.py ssss. [ 18%] 120s calculator/gamess_us/test_basis_ecp.py s [ 18%] 120s calculator/gamess_us/test_gamess_us.py sssss [ 18%] 120s calculator/gaussian/test_h2of.py s [ 18%] 120s calculator/gaussian/test_optimizer_irc.py ss [ 18%] 120s calculator/gaussian/test_water.py s [ 18%] 120s calculator/gpaw_/test_no_spin_and_spin.py s [ 18%] 120s calculator/gpaw_/test_read_text_output.py . [ 18%] 123s calculator/gpaw_/test_wannier.py ...........................ssssssssssss [ 19%] 123s ssssssssssssssssssssssssssssssssssssssssssssssssssssssss....sss [ 21%] 123s calculator/gromacs/test_gromacs.py .ss [ 21%] 123s calculator/kim/test_cutoff_skin.py s [ 21%] 123s calculator/kim/test_energy_forces_stress.py s [ 21%] 123s calculator/kim/test_modify_parameters.py s [ 21%] 123s calculator/kim/test_multi_neighlist.py s [ 21%] 123s calculator/kim/test_relax.py s [ 21%] 123s calculator/kim/test_single_atom.py s [ 21%] 123s calculator/kim/test_update_coords.py s [ 21%] 123s calculator/kim/test_update_neighbor_parameters.py s [ 21%] 123s calculator/lammps/test_prism.py ........................................ [ 22%] 123s . [ 22%] 123s calculator/lammpslib/test_Pt_stress_cellopt.py s [ 22%] 123s calculator/lammpslib/test_lammpslib_change_cell_bcs.py s [ 22%] 123s calculator/lammpslib/test_lammpslib_neighlist_bug.py s [ 22%] 123s calculator/lammpslib/test_lammpslib_post_changebox_cmds.py s [ 22%] 123s calculator/lammpslib/test_lammpslib_simple.py sssss [ 23%] 123s calculator/lammpslib/test_lammpslib_small_nonperiodic.py s [ 23%] 123s calculator/lammpsrun/test_Ar_minimize.py ss [ 23%] 123s calculator/lammpsrun/test_NaCl_minimize.py s [ 23%] 123s calculator/lammpsrun/test_Pt_md_constraints_multistep.py s [ 23%] 123s calculator/lammpsrun/test_Pt_stress_cellopt.py s [ 23%] 123s calculator/lammpsrun/test_lammps_units.py s [ 23%] 123s calculator/lammpsrun/test_no_data_file_wrap.py s [ 23%] 123s calculator/nwchem/test_nwchem_bands.py s [ 23%] 123s calculator/nwchem/test_nwchem_broken_symmetry.py s [ 23%] 123s calculator/nwchem/test_nwchem_cmdline.py s [ 23%] 123s calculator/nwchem/test_nwchem_eigenvalues.py ss [ 23%] 123s calculator/nwchem/test_nwchem_h3o2m.py s [ 23%] 123s calculator/nwchem/test_nwchem_multitask.py sss [ 23%] 123s calculator/nwchem/test_nwchem_parser.py . [ 23%] 123s calculator/nwchem/test_nwchem_runmany.py ssssssssssssss [ 24%] 123s calculator/nwchem/test_nwchem_spin_symmetry.py s [ 24%] 123s calculator/nwchem/test_nwchem_stress.py s [ 24%] 123s calculator/nwchem/test_nwchem_version.py s [ 24%] 123s calculator/octopus/test_big.py ss [ 24%] 123s calculator/onetep/test_onetep.py s [ 24%] 123s calculator/openmx/test_md.py s [ 24%] 123s calculator/openmx/test_version.py . [ 24%] 123s calculator/plumed/test_plumed.py ssssss [ 24%] 123s calculator/psi4/test_psi4_HF_3_21G.py s [ 24%] 123s calculator/qchem/test_qchem_calculator.py s [ 24%] 123s calculator/siesta/lrtddft/test_siesta_lrtddft.py s [ 24%] 123s calculator/siesta/lrtddft/test_siesta_raman.py s [ 24%] 123s calculator/siesta/test_bandstructure.py s [ 24%] 123s calculator/siesta/test_dos.py s [ 24%] 123s calculator/siesta/test_fdf_io.py s [ 24%] 123s calculator/siesta/test_siesta_read_eigenvalues.py .s [ 24%] 123s calculator/siesta/test_siesta_version.py . [ 24%] 123s calculator/siesta/test_siesta_zmat.py sss [ 24%] 123s calculator/siesta/test_write_input.py sssss [ 24%] 123s calculator/socketio/test_h2_stiffness.py sssss [ 25%] 123s calculator/socketio/test_integration.py ss [ 25%] 123s calculator/socketio/test_ipi_protocol_bfgs.py ss [ 25%] 124s calculator/socketio/test_python_interface.py . [ 25%] 124s calculator/socketio/test_socket_io_mpi_line.py . [ 25%] 124s calculator/test_al.py s [ 25%] 124s calculator/test_bond_polarizability.py ... [ 25%] 124s calculator/test_calculator.py .. [ 25%] 124s calculator/test_ch4_energy.py sssssssssss [ 25%] 124s calculator/test_command.py ............................................. [ 27%] 124s .................. [ 27%] 124s calculator/test_dftd3.py sssssssssssssss [ 27%] 125s calculator/test_eam.py . [ 27%] 125s calculator/test_eam_run.py sssssssss [ 28%] 125s calculator/test_fd.py . [ 28%] 125s calculator/test_gulp.py s [ 28%] 125s calculator/test_gulp_opt.py s [ 28%] 125s calculator/test_h2.py sss [ 28%] 125s calculator/test_h2_bond_force.py sssssss [ 28%] 125s calculator/test_h2morse.py ..... [ 28%] 126s calculator/test_harmonic.py ...... [ 28%] 126s calculator/test_lj.py ....... [ 29%] 126s calculator/test_mopac.py ss [ 29%] 126s calculator/test_mopac_version.py ... [ 29%] 127s calculator/test_morse.py .... [ 29%] 127s calculator/test_orca.py .sssssss [ 29%] 127s calculator/test_orca_qmmm.py s [ 29%] 127s calculator/test_polarizability.py . [ 29%] 127s calculator/test_si_stress.py sssss [ 29%] 128s calculator/test_subprocess_calculator.py ..s. [ 29%] 128s calculator/test_traj.py sssss.sss [ 30%] 128s calculator/test_ts09.py .. [ 30%] 128s calculator/turbomole/test_turbomole_2h2o.py s [ 30%] 128s calculator/turbomole/test_turbomole_H2.py ss [ 30%] 128s calculator/turbomole/test_turbomole_au13.py s [ 30%] 128s calculator/turbomole/test_turbomole_calculator.py .... [ 30%] 128s calculator/turbomole/test_turbomole_h2o.py ss [ 30%] 128s calculator/turbomole/test_turbomole_h3o2m.py s [ 30%] 128s calculator/turbomole/test_turbomole_optimizer.py ss [ 30%] 128s calculator/turbomole/test_turbomole_parameters.py ............. [ 30%] 128s calculator/turbomole/test_turbomole_qmmm.py s [ 30%] 128s calculator/turbomole/test_turbomole_reader.py . [ 31%] 128s calculator/turbomole/test_turbomole_statpt.py s [ 31%] 128s calculator/vasp/test_chgcar.py . [ 31%] 128s calculator/vasp/test_vasp_Al_volrelax.py s [ 31%] 128s calculator/vasp/test_vasp_calculator.py ..................... [ 31%] 128s calculator/vasp/test_vasp_charge.py ssssss [ 31%] 128s calculator/vasp/test_vasp_check_state.py s [ 31%] 128s calculator/vasp/test_vasp_co.py s [ 31%] 128s calculator/vasp/test_vasp_converge.py . [ 31%] 128s calculator/vasp/test_vasp_errors.py . [ 31%] 128s calculator/vasp/test_vasp_freq.py s [ 31%] 128s calculator/vasp/test_vasp_get_dos.py s [ 32%] 128s calculator/vasp/test_vasp_incar.py .......... [ 32%] 129s calculator/vasp/test_vasp_input.py ...................... [ 32%] 129s calculator/vasp/test_vasp_kpoints.py ....ss... [ 33%] 129s calculator/vasp/test_vasp_potcar.py ss [ 33%] 129s calculator/vasp/test_vasp_setup.py sssssss [ 33%] 129s calculator/vasp/test_vasp_wdir.py s [ 33%] 129s calculator/vasp/test_vasp_xml.py s [ 33%] 129s calculator/vasp/test_version.py . [ 33%] 129s cell/test_cell.py ........... [ 33%] 129s cell/test_cell_completion.py . [ 33%] 129s cell/test_cell_conv.py . [ 33%] 129s cell/test_cell_uncompletion.py .. [ 33%] 129s cell/test_conventional_map.py ....................... [ 34%] 129s cell/test_minkowski_reduce.py ....................... [ 35%] 129s cell/test_niggli.py .................... [ 35%] 130s cell/test_niggli_ndim.py ............................ [ 36%] 130s cell/test_niggli_op.py . [ 36%] 130s cell/test_standard_form.py . [ 36%] 130s cell/test_supercell.py .... [ 36%] 130s cli/test_ag.py . [ 36%] 131s cli/test_bandstructure.py . [ 36%] 134s cli/test_bzplot.py ... [ 36%] 134s cli/test_complete.py . [ 36%] 134s cli/test_convert.py . [ 36%] 138s cli/test_diff.py ......... [ 37%] 139s cli/test_dimensionality.py .... [ 37%] 141s cli/test_exec.py ..... [ 37%] 141s cli/test_imports.py . [ 37%] 144s cli/test_info.py ..... [ 37%] 144s cli/test_run.py . [ 37%] 145s constraints/test_CO2linear_Au111.py .. [ 37%] 145s constraints/test_external_force.py . [ 37%] 145s constraints/test_fix_bond_length_mic.py .. [ 37%] 153s constraints/test_fix_symmetry.py ........... [ 38%] 153s constraints/test_fixatoms.py . [ 38%] 156s constraints/test_fixbondlength_CO2_Au111.py .. [ 38%] 156s constraints/test_fixbonds.py . [ 38%] 156s constraints/test_fixcartesian.py .. [ 38%] 156s constraints/test_fixcom.py ... [ 38%] 156s constraints/test_fixedline_fixedplane.py ............................... [ 39%] 156s ............. [ 39%] 156s constraints/test_fixedmode.py . [ 39%] 159s constraints/test_fixinternals.py ....... [ 39%] 159s constraints/test_fixscaled.py .. [ 39%] 159s constraints/test_fixsubsetcom.py ... [ 40%] 159s constraints/test_getindices.py . [ 40%] 159s constraints/test_hookean.py . [ 40%] 159s constraints/test_hookean_pbc.py . [ 40%] 160s constraints/test_mirror.py . [ 40%] 160s constraints/test_negativeindex.py . [ 40%] 160s constraints/test_parameteric_constr.py . [ 40%] 160s constraints/test_repeat_FixAtoms.py . [ 40%] 160s constraints/test_setpos.py . [ 40%] 163s db/test_cli.py ...... [ 40%] 173s db/test_db.py ..sss [ 40%] 173s db/test_db2.py ..xxx. [ 40%] 173s db/test_db_web.py ssss. [ 40%] 173s db/test_jsondb.py . [ 40%] 173s db/test_metadata.py .. [ 40%] 173s db/test_mysql.py ssssss [ 41%] 173s db/test_o2b2o.py . [ 41%] 173s db/test_row.py . [ 41%] 173s db/test_sql_db_ext_tables.py .xxx.xxx.xxx.xxx.xxx.xxx [ 41%] 174s db/test_sqlite.py .... [ 41%] 174s db/test_table.py . [ 42%] 174s db/test_update.py .. [ 42%] 174s dft/test_bandgap.py . [ 42%] 174s dft/test_bee.py ... [ 42%] 174s dft/test_bz.py . [ 42%] 174s dft/test_dos.py . [ 42%] 175s dft/test_hex.py . [ 42%] 175s dft/test_interpolate.py . [ 42%] 175s dft/test_kpt_density_monkhorst_pack.py . [ 42%] 175s dft/test_kpts_size_offsets.py ........ [ 42%] 178s dft/test_min_distance_monkhorst_pack.py ... [ 42%] 178s dft/test_monoclinic.py . [ 42%] 178s emt/test_emt.py . [ 42%] 178s emt/test_emt1.py . [ 42%] 178s emt/test_emt2.py . [ 42%] 178s emt/test_emt_h3o2m.py . [ 42%] 178s emt/test_emt_stress.py . [ 42%] 178s filter/test_cellfilter.py sssssssssssssssssss [ 43%] 178s filter/test_filter.py . [ 43%] 178s filter/test_strain.py ss [ 43%] 178s filter/test_strain_emt.py . [ 43%] 178s fio/aims/test_aims_out.py ......... [ 43%] 178s fio/aims/test_aims_out_chunks.py ....................................... [ 44%] 179s ............................................................... [ 46%] 179s fio/aims/test_geometry.py ........... [ 46%] 179s fio/aims/test_write_control.py ...x.......x [ 47%] 179s fio/castep/test_castep_reader.py ............... [ 47%] 179s fio/castep/test_read_bands.py . [ 47%] 179s fio/exciting/test_exciting.py ssssss [ 47%] 179s fio/octopus/test_input.py .... [ 48%] 179s fio/octopus/test_output.py ...... [ 48%] 179s fio/test_abinit.py ..... [ 48%] 179s fio/test_ace.py .. [ 48%] 179s fio/test_amber.py ... [ 48%] 179s fio/test_animate.py . [ 48%] 179s fio/test_atoms_bytes.py . [ 48%] 179s fio/test_bundletrajectory.py ...... [ 48%] 179s fio/test_castep.py ........... [ 49%] 179s fio/test_cfg.py . [ 49%] 180s fio/test_cif.py ..................... [ 49%] 180s fio/test_cifblock.py ........ [ 49%] 180s fio/test_cjson.py .. [ 49%] 180s fio/test_compression.py ...................... [ 50%] 180s fio/test_cube.py .... [ 50%] 180s fio/test_dftb.py ..... [ 50%] 180s fio/test_dlp.py ... [ 50%] 180s fio/test_dmol.py . [ 50%] 180s fio/test_elk.py ... [ 50%] 180s fio/test_eon_multi_image_read.py . [ 51%] 180s fio/test_eon_readwrite.py ...... [ 51%] 180s fio/test_espresso.py ................. [ 51%] 180s fio/test_espresso_ph.py ..... [ 51%] 180s fio/test_external_io_formats.py .... [ 51%] 180s fio/test_extxyz.py ................................. [ 52%] 180s fio/test_fileobj.py . [ 52%] 180s fio/test_formats.py ... [ 52%] 181s fio/test_gaussian.py .......... [ 53%] 181s fio/test_gaussian_gjf_input.py ........... [ 53%] 181s fio/test_gaussian_out.py .......... [ 53%] 181s fio/test_gen.py ......................... [ 54%] 181s fio/test_gpaw.py . [ 54%] 181s fio/test_gpumd.py .......... [ 54%] 181s fio/test_info.py . [ 54%] 181s fio/test_ioformats.py .sssssssssssssssssssssssssssssssssssssssssssssssss [ 56%] 181s sssssssssssssssssssssssssssssssssssssssssssssssss [ 57%] 181s fio/test_iread_path.py . [ 57%] 181s fio/test_json_arrays.py . [ 57%] 181s fio/test_jsonio.py .. [ 57%] 181s fio/test_jsonio_atoms.py ... [ 57%] 181s fio/test_lammpsdump.py .................. [ 58%] 181s fio/test_magmom.py . [ 58%] 181s fio/test_magres.py .. [ 58%] 181s fio/test_match_magic.py . [ 58%] 181s fio/test_mustem.py .. [ 58%] 182s fio/test_netcdftrajectory.py .... [ 58%] 182s fio/test_nomad.py . [ 58%] 182s fio/test_nwchem.py ..... [ 58%] 182s fio/test_oi.py ......................................................... [ 60%] 182s ......................... [ 61%] 182s fio/test_oldtraj.py . [ 61%] 183s fio/test_onetep.py .... [ 61%] 183s fio/test_openmx.py .. [ 61%] 183s fio/test_opls.py . [ 61%] 183s fio/test_orca.py ..... [ 61%] 183s fio/test_parallel.py . [ 61%] 183s fio/test_pdb_cell_io.py .... [ 61%] 183s fio/test_pdb_extra.py .. [ 61%] 184s fio/test_pickle_bundle_trajectory.py ..x.x.. [ 61%] 184s fio/test_povray.py ss.ss [ 62%] 184s fio/test_prismatic.py .. [ 62%] 184s fio/test_proteindatabank.py .......... [ 62%] 184s fio/test_py.py . [ 62%] 184s fio/test_pycodcif_read.py . [ 62%] 184s fio/test_qbox.py .. [ 62%] 184s fio/test_readwrite_errors.py ........ [ 62%] 184s fio/test_res.py . [ 62%] 184s fio/test_rmc6f.py ............ [ 63%] 184s fio/test_sdf.py .. [ 63%] 184s fio/test_siesta.py ... [ 63%] 184s fio/test_traj_bytesio.py . [ 63%] 184s fio/test_trajectory.py .... [ 63%] 184s fio/test_trajectory_heterogeneous.py . [ 63%] 184s fio/test_turbomole.py . [ 63%] 184s fio/test_ulm.py .... [ 63%] 184s fio/test_ulm_dummy.py . [ 63%] 184s fio/test_v_sim.py . [ 63%] 184s fio/test_vasp_structure.py ........ [ 63%] 184s fio/test_wout.py .. [ 63%] 184s fio/test_xsd_bond.py . [ 63%] 184s fio/test_xsf_spec.py . [ 64%] 184s fio/test_xyz.py ...... [ 64%] 184s fio/vasp/test_incar_writer.py ............. [ 64%] 184s fio/vasp/test_poscar.py . [ 64%] 184s fio/vasp/test_read_vasp_xml.py ....... [ 64%] 184s fio/vasp/test_vasp_out.py ....... [ 64%] 185s fio/vasp/test_vasp_outcar_parsers.py ............................ [ 65%] 185s fio/vasp/test_vasp_poscar.py ............ [ 66%] 185s forcefields/test_acn.py . [ 66%] 185s forcefields/test_aic.py . [ 66%] 185s forcefields/test_combine_mm.py . [ 66%] 193s forcefields/test_combine_mm2.py . [ 66%] 195s forcefields/test_counterions.py . [ 66%] 197s forcefields/test_forceqmmm.py .............. [ 66%] 198s forcefields/test_qmmm.py . [ 66%] 198s forcefields/test_qmmm_acn.py . [ 66%] 201s forcefields/test_rattle.py . [ 66%] 202s forcefields/test_rattle_linear.py . [ 66%] 202s forcefields/test_tip4p.py . [ 66%] 202s forcefields/test_tipnp.py . [ 66%] 202s forcefields/test_utils_ff_vdw.py . [ 66%] 202s ga/test_add_candidates.py . [ 66%] 204s ga/test_basic_example_main_run.py . [ 66%] 209s ga/test_bulk_operators.py . [ 66%] 209s ga/test_chain_operators.py . [ 66%] 209s ga/test_create_database.py . [ 67%] 209s ga/test_cutandsplicepairing.py . [ 67%] 210s ga/test_database_logic.py . [ 67%] 210s ga/test_element_operators.py . [ 67%] 211s ga/test_film_operators.py . [ 67%] 211s ga/test_mutations.py . [ 67%] 211s ga/test_particle_comparators.py . [ 67%] 211s ga/test_particle_mutations.py . [ 67%] 211s ga/test_particle_operators.py . [ 67%] 211s ga/test_slab_operators.py ..... [ 67%] 211s ga/test_standardcomparator.py . [ 67%] 211s geometry/test_analysis.py ... [ 67%] 212s geometry/test_dimensionality.py ......... [ 67%] 212s geometry/test_distance.py . [ 67%] 213s geometry/test_geometry.py . [ 67%] 213s geometry/test_geometry_derivatives.py .... [ 67%] 213s geometry/test_geometry_rdf.py .... [ 68%] 213s gui/test_run.py ssssssssssssssssssssssssssssssssssssssss [ 69%] 213s lammpsdata/test_lammpsdata_read.py . [ 69%] 213s lammpsdata/test_lammpsdata_write.py . [ 69%] 213s lammpsdata/test_read_connectivity.py ...... [ 69%] 213s lammpsdata/test_write_and_read.py .............................. [ 70%] 214s md/test_CO2linear_Au111_langevin.py . [ 70%] 216s md/test_bussi.py .... [ 70%] 217s md/test_ce_curvature.py .. [ 70%] 217s md/test_ce_logging.py . [ 70%] 218s md/test_ce_potentiostat.py .. [ 70%] 218s md/test_fixrotation.py s [ 70%] 218s md/test_idealgas.py . [ 70%] 218s md/test_langevin_asapcompat.py . [ 70%] 218s md/test_langevin_com.py . [ 70%] 222s md/test_langevin_switching.py . [ 70%] 225s md/test_maxwellboltzmann.py .. [ 70%] 225s md/test_md.py .. [ 70%] 227s md/test_md_logger.py .... [ 70%] 228s md/test_md_logger_interval.py ...... [ 71%] 229s md/test_nose_hoover_chain.py ..ss [ 71%] 229s md/test_nvt_npt.py sss [ 71%] 229s md/test_phonon_md_init.py s [ 71%] 229s md/test_rng.py .. [ 71%] 229s md/test_velocity_distribution.py ... [ 71%] 229s md/test_verlet_thermostats_asap.py s [ 71%] 229s neb/test_COCu111.py . [ 71%] 230s neb/test_COCu111_2.py . [ 71%] 230s neb/test_autoneb.py s. [ 71%] 242s neb/test_dynamic_neb.py . [ 71%] 243s neb/test_idpp.py . [ 71%] 243s neb/test_interpolate_images.py ..... [ 71%] 245s neb/test_neb_tr.py . [ 71%] 256s neb/test_precon_neb.py ............ [ 72%] 256s neb/test_shared_calculator_neb.py ....... [ 72%] 257s neighbor/test_neighbor.py ................................ [ 73%] 257s neighbor/test_neighbor_initialization.py . [ 73%] 260s neighbor/test_neighbor_kernel.py . [ 73%] 260s optimize/test_bad_restart.py . [ 73%] 261s optimize/test_cellawarebfgs.py ...... [ 73%] 262s optimize/test_climb_fix_internals.py ... [ 73%] 262s optimize/test_fire.py . [ 73%] 263s optimize/test_fire2.py . [ 73%] 263s optimize/test_maxstep.py . [ 73%] 263s optimize/test_minimahop.py s [ 73%] 263s optimize/test_nsteps.py ... [ 73%] 263s optimize/test_optimize_stepwise.py .. [ 73%] 265s optimize/test_optimizer_restart.py ..x [ 73%] 267s optimize/test_optimizers.py .......................................... [ 75%] 267s optimize/test_replay.py . [ 75%] 269s precon/test_amin.py . [ 75%] 283s precon/test_ff_and_precon_c60.py . [ 75%] 283s precon/test_lbfgs.py . [ 75%] 285s precon/test_precon_assembly.py .................................... [ 76%] 285s precon/test_smallcell.py .. [ 76%] 286s precon/test_unitcellfilter.py .. [ 76%] 290s spacegroup/test_minerals.py ................................ [ 77%] 291s spacegroup/test_space_group_data.py ......... [ 77%] 291s spacegroup/test_spacegroup.py .... [ 77%] 291s spacegroup/test_spacegroup_crystal.py .. [ 77%] 291s spacegroup/test_spacegroup_utils.py .................................... [ 78%] 291s ................ [ 79%] 291s spectrum/test_doscollection.py ......................................... [ 80%] 291s .. [ 80%] 292s spectrum/test_dosdata.py ............................................... [ 81%] 292s ..... [ 81%] 292s standardization/test_properties.py . [ 81%] 292s test_bader.py . [ 81%] 292s test_bandpath_kpts_axis.py . [ 81%] 295s test_basin.py . [ 81%] 295s test_calc_outputs_big.py ... [ 82%] 295s test_calc_properties.py .......................................... [ 83%] 295s test_calculator_equal.py ............................................... [ 84%] 295s ........................................................................ [ 86%] 295s ........................................................................ [ 88%] 295s ............................................. [ 89%] 295s test_calculator_label.py . [ 90%] 295s test_checkpoint.py .. [ 90%] 297s test_cluster.py ........................ [ 90%] 297s test_cutoffs.py . [ 90%] 297s test_dependency_list.py .. 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[ 94%] 303s test_mixingcalc.py . [ 94%] 303s test_mpi.py .s [ 94%] 303s test_noncollinear.py . [ 94%] 303s test_nwchem_writer.py ... [ 94%] 303s test_parsemath.py . [ 94%] 303s test_pathlib_support.py . [ 94%] 303s test_phasediagram.py ... [ 95%] 304s test_phonons.py ....... [ 95%] 304s test_potential_energies.py . [ 95%] 305s test_pourbaix.py ...... [ 95%] 305s test_properties.py . [ 95%] 305s test_ptable.py . [ 95%] 305s test_pubchem.py . [ 95%] 305s test_quaternions.py ......... [ 95%] 305s test_root_surf.py . [ 95%] 305s test_s22.py . [ 95%] 305s test_singlepoint_dft_calc.py . [ 95%] 305s test_singlepointcalc.py . [ 95%] 305s test_springcalc.py . [ 95%] 305s test_stm.py . [ 95%] 306s test_stress.py .. [ 95%] 310s test_structure_comparator.py .................... [ 96%] 310s test_symbols.py ........... [ 96%] 310s test_thermochemistry.py .........s..... [ 97%] 310s test_things.py . [ 97%] 310s test_timing.py . [ 97%] 310s test_units.py .. [ 97%] 310s test_util.py ......................... [ 98%] 310s test_versionnumber.py . [ 98%] 310s test_x3d.py s [ 98%] 311s test_xrdebye.py ... [ 98%] 311s test_xwopen.py ... [ 98%] 311s test_zmatrix.py .... [ 98%] 313s transport/test_transport_calculator.py . [ 98%] 314s vibrations/test_albrecht.py .... [ 98%] 314s vibrations/test_bond_polarizability_raman.py ... [ 98%] 314s vibrations/test_combine.py . [ 98%] 315s vibrations/test_folding.py . [ 98%] 315s vibrations/test_franck_condon.py ... [ 98%] 315s vibrations/test_pickle2json.py . [ 98%] 315s vibrations/test_placzek.py .... [ 98%] 315s vibrations/test_profeta_albrecht.py . [ 98%] 315s vibrations/test_vib.py ................................... [ 99%] 316s vibrations/test_vibrations_example.py . [100%] 316s 316s =============================== warnings summary =============================== 316s :488 316s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 16 from C header, got 96 from PyObject 316s 316s calculator/turbomole/test_turbomole_parameters.py::test_tm_parameters_update_wrong_type 316s /usr/lib/python3/dist-packages/ase/calculators/turbomole/parameters.py:449: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 316s if k in list(self.parameter_spec[p].keys()): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s constraints/test_fix_symmetry.py::test_fail_md 316s /usr/lib/python3/dist-packages/_pytest/python.py:157: ResourceWarning: unclosed file <_io.TextIOWrapper name='/dev/null' mode='a' encoding='utf-8'> 316s result = testfunction(**testargs) 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s db/test_sql_db_ext_tables.py::test_create_and_delete_ext_tab[postgresql] 316s /usr/lib/python3/dist-packages/_pytest/_code/code.py:197: ResourceWarning: unclosed database in 316s def __init__( 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s db/test_sql_db_ext_tables.py::test_create_and_delete_ext_tab[postgresql] 316s /usr/lib/python3/dist-packages/_pytest/_code/code.py:197: ResourceWarning: unclosed database in 316s def __init__( 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s fio/test_oi.py::test_ioformat[eps] 316s :785: ResourceWarning: unclosed database in 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s fio/test_oi.py::test_ioformat[eps] 316s :785: ResourceWarning: unclosed database in 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed database in 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed database in 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed database in 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed database in 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed database in 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed database in 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 316s /usr/lib/python3/dist-packages/ase/db/sqlite.py:522: ResourceWarning: unclosed database in 316s def _old2new(self, values): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s geometry/test_analysis.py::test_analysis 316s /usr/lib/python3/dist-packages/scipy/sparse/_coo.py:215: ResourceWarning: unclosed database in 316s self.coords = tuple(np.asarray(idx, dtype=idx_dtype) 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s md/test_bussi.py::test_bussi 316s /usr/lib/python3/dist-packages/ase/test/md/test_bussi.py:15: ResourceWarning: unclosed file <_io.TextIOWrapper name='/dev/null' mode='a' encoding='utf-8'> 316s with pytest.raises(ValueError): 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s neb/test_dynamic_neb.py::test_dynamic_neb 316s /usr/lib/python3/dist-packages/ase/neighborlist.py:1022: ResourceWarning: unclosed file <_io.TextIOWrapper name='/dev/null' mode='w' encoding='utf-8'> 316s disp = np.array(list(self.displacements[a]) + displacements2[a]) 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s spectrum/test_doscollection.py::TestDOSCollection::test_plot[None] 316s /usr/lib/python3/dist-packages/matplotlib/cbook.py:1791: ResourceWarning: unclosed file <_io.BufferedWriter name='fragile_BFGSLineSearch.traj'> 316s to_canonical = {alias: canonical 316s Enable tracemalloc to get traceback where the object was allocated. 316s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 316s 316s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 316s ==== 2964 passed, 532 skipped, 26 xfailed, 19 warnings in 212.40s (0:03:32) ==== 316s :0: DeprecationWarning: builtin type swigvarlink has no __module__ attribute 317s autopkgtest [01:43:45]: test command1: -----------------------] 317s command1 PASS 317s autopkgtest [01:43:45]: test command1: - - - - - - - - - - results - - - - - - - - - - 318s autopkgtest [01:43:46]: @@@@@@@@@@@@@@@@@@@@ summary 318s command1 PASS