0s autopkgtest [09:29:44]: starting date and time: 2026-02-05 09:29:44+0000 0s autopkgtest [09:29:44]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [09:29:44]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hzy0huba/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade prime-phylo --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.42-2ubuntu5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-ppc64el-21.secgroup --name adt-resolute-ppc64el-prime-phylo-20260205-092943-juju-7f2275-prod-proposed-migration-environment-20-1a195442-1394-49cc-9641-4c394dcb4fc0 --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-ppc64el-prime-phylo-20260205-092943-juju-7f2275-prod-proposed-migration-environment-20-1a195442-1394-49cc-9641-4c394dcb4fc0 from image adt/ubuntu-resolute-ppc64el-server-20260205.img (UUID f866c950-0b62-4023-bac6-0f13279e15ed)... 73s autopkgtest [09:30:57]: testbed dpkg architecture: ppc64el 73s autopkgtest [09:30:57]: testbed apt version: 3.1.14 75s autopkgtest [09:30:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 75s autopkgtest [09:30:59]: testbed release detected to be: None 77s autopkgtest [09:31:01]: updating testbed package index (apt update) 77s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 77s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 77s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 77s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 77s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [35.4 kB] 77s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5260 B] 77s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1719 kB] 77s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [228 kB] 78s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [261 kB] 78s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1514 kB] 78s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [21.9 kB] 78s Fetched 3910 kB in 1s (3756 kB/s) 79s Reading package lists... 80s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 80s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 80s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 80s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 81s Reading package lists... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s Calculating upgrade... 82s The following packages will be upgraded: 82s libc-bin libc-gconv-modules-extra libc6 locales pollinate 82s python3-referencing sed 82s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Need to get 8612 kB of archives. 82s After this operation, 0 B of additional disk space will be used. 82s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el sed ppc64el 4.9-2build3 [211 kB] 82s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-gconv-modules-extra ppc64el 2.42-2ubuntu5 [1448 kB] 82s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc6 ppc64el 2.42-2ubuntu5 [1913 kB] 83s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-bin ppc64el 2.42-2ubuntu5 [748 kB] 83s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el locales all 2.42-2ubuntu5 [4255 kB] 84s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el pollinate all 4.33-4ubuntu5 [14.0 kB] 84s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 84s dpkg-preconfigure: unable to re-open stdin: No such file or directory 84s Fetched 8612 kB in 2s (3851 kB/s) 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 85s Preparing to unpack .../sed_4.9-2build3_ppc64el.deb ... 85s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 85s Setting up sed (4.9-2build3) ... 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 85s Preparing to unpack .../libc-gconv-modules-extra_2.42-2ubuntu5_ppc64el.deb ... 85s Unpacking libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 86s Setting up libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 87s Preparing to unpack .../libc6_2.42-2ubuntu5_ppc64el.deb ... 87s Unpacking libc6:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 87s Setting up libc6:ppc64el (2.42-2ubuntu5) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 87s Preparing to unpack .../libc-bin_2.42-2ubuntu5_ppc64el.deb ... 87s Unpacking libc-bin (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 88s Setting up libc-bin (2.42-2ubuntu5) ... 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 88s Preparing to unpack .../locales_2.42-2ubuntu5_all.deb ... 88s Unpacking locales (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 88s Preparing to unpack .../pollinate_4.33-4ubuntu5_all.deb ... 88s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ... 88s Preparing to unpack .../python3-referencing_0.36.2-1ubuntu2_all.deb ... 89s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ... 89s Setting up locales (2.42-2ubuntu5) ... 89s Generating locales (this might take a while)... 90s en_US.UTF-8... done 90s Generation complete. 90s Setting up pollinate (4.33-4ubuntu5) ... 101s Setting up python3-referencing (0.36.2-1ubuntu2) ... 101s Processing triggers for man-db (2.13.1-1) ... 103s Processing triggers for install-info (7.2-5) ... 104s Processing triggers for systemd (259-1ubuntu3) ... 105s autopkgtest [09:31:29]: upgrading testbed (apt dist-upgrade and autopurge) 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 111s Calculating upgrade... 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 111s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s Solving dependencies... 112s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 112s autopkgtest [09:31:36]: rebooting testbed after setup commands that affected boot 198s autopkgtest [09:33:02]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:45:54 UTC 2026 214s autopkgtest [09:33:18]: @@@@@@@@@@@@@@@@@@@@ apt-source prime-phylo 216s Get:1 http://ftpmaster.internal/ubuntu resolute/universe prime-phylo 1.0.11-14 (dsc) [2366 B] 216s Get:2 http://ftpmaster.internal/ubuntu resolute/universe prime-phylo 1.0.11-14 (tar) [751 kB] 216s Get:3 http://ftpmaster.internal/ubuntu resolute/universe prime-phylo 1.0.11-14 (diff) [11.8 kB] 216s gpgv: Signature made Mon Sep 22 19:59:10 2025 UTC 216s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 216s gpgv: issuer "emollier@debian.org" 216s gpgv: Can't check signature: No public key 216s dpkg-source: warning: cannot verify inline signature for ./prime-phylo_1.0.11-14.dsc: no acceptable signature found 216s autopkgtest [09:33:20]: testing package prime-phylo version 1.0.11-14 216s autopkgtest [09:33:20]: build not needed 217s autopkgtest [09:33:21]: test run-unit-test: preparing testbed 217s Reading package lists... 217s Building dependency tree... 217s Reading state information... 217s Solving dependencies... 218s The following NEW packages will be installed: 218s libblas3 libboost-mpi1.88.0 libboost-serialization1.88.0 218s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 libhwloc-plugins 218s libhwloc15 libibmad5 libibumad3 liblapack3 libopenmpi40 libpciaccess0 218s librdmacm1t64 libucx0 libxnvctrl0 ocl-icd-libopencl1 prime-phylo 218s 0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded. 218s Need to get 11.3 MB of archives. 218s After this operation, 45.4 MB of additional disk space will be used. 218s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas3 ppc64el 3.12.1-7ubuntu1 [291 kB] 218s Get:2 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libboost-serialization1.88.0 ppc64el 1.88.0-1.4ubuntu3 [351 kB] 218s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libevent-pthreads-2.1-7t64 ppc64el 2.1.12-stable-10build1 [8140 B] 218s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el librdmacm1t64 ppc64el 61.0-2ubuntu1 [82.8 kB] 218s Get:5 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libfabric1 ppc64el 2.1.0-1.1 [786 kB] 218s Get:6 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhwloc15 ppc64el 2.12.2-1 [223 kB] 218s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-12ubuntu1 [169 kB] 218s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el libibumad3 ppc64el 61.0-2ubuntu1 [34.6 kB] 218s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el libibmad5 ppc64el 61.0-2ubuntu1 [47.2 kB] 218s Get:10 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libucx0 ppc64el 1.20.0+ds-4ubuntu1 [1009 kB] 218s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpciaccess0 ppc64el 0.18.1-1ubuntu2 [21.9 kB] 218s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxnvctrl0 ppc64el 510.47.03-0ubuntu7 [14.7 kB] 218s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el ocl-icd-libopencl1 ppc64el 2.3.4-1 [47.8 kB] 218s Get:14 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhwloc-plugins ppc64el 2.12.2-1 [17.7 kB] 218s Get:15 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libopenmpi40 ppc64el 5.0.8-8ubuntu1 [3435 kB] 219s Get:16 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libboost-mpi1.88.0 ppc64el 1.88.0-1.4ubuntu3 [274 kB] 219s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran5 ppc64el 15.2.0-12ubuntu1 [620 kB] 219s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack3 ppc64el 3.12.1-7ubuntu1 [2960 kB] 219s Get:19 http://ftpmaster.internal/ubuntu resolute/universe ppc64el prime-phylo ppc64el 1.0.11-14 [859 kB] 220s Fetched 11.3 MB in 2s (6088 kB/s) 220s Selecting previously unselected package libblas3:ppc64el. 220s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 220s Preparing to unpack .../00-libblas3_3.12.1-7ubuntu1_ppc64el.deb ... 220s Unpacking libblas3:ppc64el (3.12.1-7ubuntu1) ... 220s Selecting previously unselected package libboost-serialization1.88.0:ppc64el. 220s Preparing to unpack .../01-libboost-serialization1.88.0_1.88.0-1.4ubuntu3_ppc64el.deb ... 220s Unpacking libboost-serialization1.88.0:ppc64el (1.88.0-1.4ubuntu3) ... 220s Selecting previously unselected package libevent-pthreads-2.1-7t64:ppc64el. 220s Preparing to unpack .../02-libevent-pthreads-2.1-7t64_2.1.12-stable-10build1_ppc64el.deb ... 220s Unpacking libevent-pthreads-2.1-7t64:ppc64el (2.1.12-stable-10build1) ... 220s Selecting previously unselected package librdmacm1t64:ppc64el. 220s Preparing to unpack .../03-librdmacm1t64_61.0-2ubuntu1_ppc64el.deb ... 220s Unpacking librdmacm1t64:ppc64el (61.0-2ubuntu1) ... 220s Selecting previously unselected package libfabric1:ppc64el. 220s Preparing to unpack .../04-libfabric1_2.1.0-1.1_ppc64el.deb ... 220s Unpacking libfabric1:ppc64el (2.1.0-1.1) ... 220s Selecting previously unselected package libhwloc15:ppc64el. 220s Preparing to unpack .../05-libhwloc15_2.12.2-1_ppc64el.deb ... 220s Unpacking libhwloc15:ppc64el (2.12.2-1) ... 220s Selecting previously unselected package libgomp1:ppc64el. 220s Preparing to unpack .../06-libgomp1_15.2.0-12ubuntu1_ppc64el.deb ... 220s Unpacking libgomp1:ppc64el (15.2.0-12ubuntu1) ... 220s Selecting previously unselected package libibumad3:ppc64el. 220s Preparing to unpack .../07-libibumad3_61.0-2ubuntu1_ppc64el.deb ... 220s Unpacking libibumad3:ppc64el (61.0-2ubuntu1) ... 220s Selecting previously unselected package libibmad5:ppc64el. 220s Preparing to unpack .../08-libibmad5_61.0-2ubuntu1_ppc64el.deb ... 220s Unpacking libibmad5:ppc64el (61.0-2ubuntu1) ... 220s Selecting previously unselected package libucx0:ppc64el. 220s Preparing to unpack .../09-libucx0_1.20.0+ds-4ubuntu1_ppc64el.deb ... 220s Unpacking libucx0:ppc64el (1.20.0+ds-4ubuntu1) ... 220s Selecting previously unselected package libpciaccess0:ppc64el. 220s Preparing to unpack .../10-libpciaccess0_0.18.1-1ubuntu2_ppc64el.deb ... 220s Unpacking libpciaccess0:ppc64el (0.18.1-1ubuntu2) ... 220s Selecting previously unselected package libxnvctrl0:ppc64el. 220s Preparing to unpack .../11-libxnvctrl0_510.47.03-0ubuntu7_ppc64el.deb ... 220s Unpacking libxnvctrl0:ppc64el (510.47.03-0ubuntu7) ... 220s Selecting previously unselected package ocl-icd-libopencl1:ppc64el. 220s Preparing to unpack .../12-ocl-icd-libopencl1_2.3.4-1_ppc64el.deb ... 220s Unpacking ocl-icd-libopencl1:ppc64el (2.3.4-1) ... 220s Selecting previously unselected package libhwloc-plugins:ppc64el. 220s Preparing to unpack .../13-libhwloc-plugins_2.12.2-1_ppc64el.deb ... 220s Unpacking libhwloc-plugins:ppc64el (2.12.2-1) ... 220s Selecting previously unselected package libopenmpi40:ppc64el. 220s Preparing to unpack .../14-libopenmpi40_5.0.8-8ubuntu1_ppc64el.deb ... 220s Unpacking libopenmpi40:ppc64el (5.0.8-8ubuntu1) ... 220s Selecting previously unselected package libboost-mpi1.88.0. 220s Preparing to unpack .../15-libboost-mpi1.88.0_1.88.0-1.4ubuntu3_ppc64el.deb ... 220s Unpacking libboost-mpi1.88.0 (1.88.0-1.4ubuntu3) ... 220s Selecting previously unselected package libgfortran5:ppc64el. 220s Preparing to unpack .../16-libgfortran5_15.2.0-12ubuntu1_ppc64el.deb ... 220s Unpacking libgfortran5:ppc64el (15.2.0-12ubuntu1) ... 220s Selecting previously unselected package liblapack3:ppc64el. 220s Preparing to unpack .../17-liblapack3_3.12.1-7ubuntu1_ppc64el.deb ... 220s Unpacking liblapack3:ppc64el (3.12.1-7ubuntu1) ... 220s Selecting previously unselected package prime-phylo. 220s Preparing to unpack .../18-prime-phylo_1.0.11-14_ppc64el.deb ... 220s Unpacking prime-phylo (1.0.11-14) ... 220s Setting up libpciaccess0:ppc64el (0.18.1-1ubuntu2) ... 220s Setting up libevent-pthreads-2.1-7t64:ppc64el (2.1.12-stable-10build1) ... 220s Setting up libibumad3:ppc64el (61.0-2ubuntu1) ... 220s Setting up libibmad5:ppc64el (61.0-2ubuntu1) ... 220s Setting up libgomp1:ppc64el (15.2.0-12ubuntu1) ... 220s Setting up libboost-serialization1.88.0:ppc64el (1.88.0-1.4ubuntu3) ... 220s Setting up libxnvctrl0:ppc64el (510.47.03-0ubuntu7) ... 220s Setting up libblas3:ppc64el (3.12.1-7ubuntu1) ... 220s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 220s Setting up libhwloc15:ppc64el (2.12.2-1) ... 220s Setting up libgfortran5:ppc64el (15.2.0-12ubuntu1) ... 220s Setting up ocl-icd-libopencl1:ppc64el (2.3.4-1) ... 220s Setting up librdmacm1t64:ppc64el (61.0-2ubuntu1) ... 220s Setting up libfabric1:ppc64el (2.1.0-1.1) ... 220s Setting up libucx0:ppc64el (1.20.0+ds-4ubuntu1) ... 220s Setting up liblapack3:ppc64el (3.12.1-7ubuntu1) ... 220s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 220s Setting up libhwloc-plugins:ppc64el (2.12.2-1) ... 220s Setting up libopenmpi40:ppc64el (5.0.8-8ubuntu1) ... 220s Setting up libboost-mpi1.88.0 (1.88.0-1.4ubuntu3) ... 220s Setting up prime-phylo (1.0.11-14) ... 220s Processing triggers for man-db (2.13.1-1) ... 221s Processing triggers for libc-bin (2.42-2ubuntu5) ... 222s autopkgtest [09:33:26]: test run-unit-test: [----------------------- 222s PASS Test 1 315s L N alpha time 326s -3785.26 0 1 326s PASS Test 2 326s 326s autopkgtest [09:35:10]: test run-unit-test: -----------------------] 337s run-unit-test PASS 337s autopkgtest [09:35:21]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 381s autopkgtest [09:36:05]: @@@@@@@@@@@@@@@@@@@@ summary 381s run-unit-test PASS