0s autopkgtest [19:06:15]: starting date and time: 2026-01-22 19:06:15+0000 0s autopkgtest [19:06:15]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [19:06:15]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9bfzwwln/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade nipype --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.14.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-ppc64el-20.secgroup --name adt-resolute-ppc64el-nipype-20260122-190615-juju-7f2275-prod-proposed-migration-environment-2-e5604956-b25b-4f79-9f28-1d44754f9b2a --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-ppc64el-nipype-20260122-190615-juju-7f2275-prod-proposed-migration-environment-2-e5604956-b25b-4f79-9f28-1d44754f9b2a from image adt/ubuntu-resolute-ppc64el-server-20260122.img (UUID 987e5803-394f-43eb-a969-151b6b75a57a)... 57s autopkgtest [19:07:12]: testbed dpkg architecture: ppc64el 57s autopkgtest [19:07:12]: testbed apt version: 3.1.12 57s autopkgtest [19:07:12]: @@@@@@@@@@@@@@@@@@@@ test bed setup 57s autopkgtest [19:07:12]: testbed release detected to be: None 58s autopkgtest [19:07:13]: updating testbed package index (apt update) 58s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 58s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 58s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 58s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 58s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [19.2 kB] 58s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [815 kB] 59s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [80.9 kB] 59s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2820 B] 59s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [103 kB] 59s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [618 kB] 59s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [4644 B] 59s Fetched 1768 kB in 1s (2624 kB/s) 60s Reading package lists... 60s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 60s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 60s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 60s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 61s Reading package lists... 61s Reading package lists... 61s Building dependency tree... 61s Reading state information... 62s Calculating upgrade... 62s The following packages were automatically installed and are no longer required: 62s python3.13 python3.13-minimal 62s Use 'sudo apt autoremove' to remove them. 62s The following NEW packages will be installed: 62s libpython3.14-minimal libpython3.14-stdlib python3.14 python3.14-minimal 62s The following packages will be upgraded: 62s libpython3-stdlib python3 python3-gdbm python3-minimal 62s 4 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 62s Need to get 6966 kB of archives. 62s After this operation, 27.7 MB of additional disk space will be used. 62s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpython3.14-minimal ppc64el 3.14.2-1 [921 kB] 62s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3.14-minimal ppc64el 3.14.2-1 [2712 kB] 62s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el python3-gdbm ppc64el 3.14.2-1 [11.1 kB] 62s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el python3-minimal ppc64el 3.14.2-1 [28.2 kB] 62s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el python3 ppc64el 3.14.2-1 [22.9 kB] 62s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpython3.14-stdlib ppc64el 3.14.2-1 [2444 kB] 62s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3.14 ppc64el 3.14.2-1 [816 kB] 62s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libpython3-stdlib ppc64el 3.14.2-1 [10.9 kB] 62s dpkg-preconfigure: unable to re-open stdin: No such file or directory 62s Fetched 6966 kB in 0s (31.4 MB/s) 62s Selecting previously unselected package libpython3.14-minimal:ppc64el. 63s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 120824 files and directories currently installed.) 63s Preparing to unpack .../libpython3.14-minimal_3.14.2-1_ppc64el.deb ... 63s Unpacking libpython3.14-minimal:ppc64el (3.14.2-1) ... 63s Selecting previously unselected package python3.14-minimal. 63s Preparing to unpack .../python3.14-minimal_3.14.2-1_ppc64el.deb ... 63s Unpacking python3.14-minimal (3.14.2-1) ... 64s Preparing to unpack .../python3-gdbm_3.14.2-1_ppc64el.deb ... 64s Unpacking python3-gdbm (3.14.2-1) over (3.13.9-1) ... 64s Setting up libpython3.14-minimal:ppc64el (3.14.2-1) ... 64s Setting up python3.14-minimal (3.14.2-1) ... 65s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 121166 files and directories currently installed.) 65s Preparing to unpack .../python3-minimal_3.14.2-1_ppc64el.deb ... 65s Unpacking python3-minimal (3.14.2-1) over (3.13.7-1) ... 66s Setting up python3-minimal (3.14.2-1) ... 66s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 121166 files and directories currently installed.) 66s Preparing to unpack .../python3_3.14.2-1_ppc64el.deb ... 66s running python pre-rtupdate hooks for python3.14... 66s Unpacking python3 (3.14.2-1) over (3.13.7-1) ... 66s Selecting previously unselected package libpython3.14-stdlib:ppc64el. 66s Preparing to unpack .../libpython3.14-stdlib_3.14.2-1_ppc64el.deb ... 66s Unpacking libpython3.14-stdlib:ppc64el (3.14.2-1) ... 66s Selecting previously unselected package python3.14. 66s Preparing to unpack .../python3.14_3.14.2-1_ppc64el.deb ... 66s Unpacking python3.14 (3.14.2-1) ... 66s Preparing to unpack .../libpython3-stdlib_3.14.2-1_ppc64el.deb ... 66s Unpacking libpython3-stdlib:ppc64el (3.14.2-1) over (3.13.7-1) ... 67s Setting up libpython3.14-stdlib:ppc64el (3.14.2-1) ... 67s Setting up python3.14 (3.14.2-1) ... 68s Setting up libpython3-stdlib:ppc64el (3.14.2-1) ... 68s Setting up python3-gdbm (3.14.2-1) ... 68s Setting up python3 (3.14.2-1) ... 68s running python rtupdate hooks for python3.14... 68s running python post-rtupdate hooks for python3.14... 68s Processing triggers for man-db (2.13.1-1) ... 69s Processing triggers for systemd (259-1ubuntu2) ... 70s autopkgtest [19:07:25]: upgrading testbed (apt dist-upgrade and autopurge) 70s Reading package lists... 70s Building dependency tree... 70s Reading state information... 70s Calculating upgrade... 70s The following packages were automatically installed and are no longer required: 70s python3.13 python3.13-minimal 70s Use 'sudo apt autoremove' to remove them. 70s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 70s Reading package lists... 70s Building dependency tree... 70s Reading state information... 70s Solving dependencies... 71s The following packages will be REMOVED: 71s python3.13* python3.13-minimal* 71s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 71s After this operation, 9077 kB disk space will be freed. 71s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 121596 files and directories currently installed.) 71s Removing python3.13 (3.13.11-1) ... 71s Removing python3.13-minimal (3.13.11-1) ... 72s Processing triggers for man-db (2.13.1-1) ... 72s Processing triggers for systemd (259-1ubuntu2) ... 73s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 121569 files and directories currently installed.) 73s Purging configuration files for python3.13-minimal (3.13.11-1) ... 75s autopkgtest [19:07:30]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:45:54 UTC 2026 75s autopkgtest [19:07:30]: @@@@@@@@@@@@@@@@@@@@ apt-source nipype 77s Get:1 http://ftpmaster.internal/ubuntu resolute/universe nipype 1.10.0-1 (dsc) [2988 B] 77s Get:2 http://ftpmaster.internal/ubuntu resolute/universe nipype 1.10.0-1 (tar) [2925 kB] 77s Get:3 http://ftpmaster.internal/ubuntu resolute/universe nipype 1.10.0-1 (diff) [17.5 kB] 77s gpgv: Signature made Sat Dec 20 11:29:54 2025 UTC 77s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 77s gpgv: issuer "emollier@debian.org" 77s gpgv: Can't check signature: No public key 77s dpkg-source: warning: cannot verify inline signature for ./nipype_1.10.0-1.dsc: no acceptable signature found 77s autopkgtest [19:07:32]: testing package nipype version 1.10.0-1 78s autopkgtest [19:07:33]: build not needed 79s autopkgtest [19:07:34]: test run-unit-test: preparing testbed 79s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Solving dependencies... 80s The following NEW packages will be installed: 80s diffstat docutils-common fontconfig fontconfig-config fonts-dejavu-core 80s fonts-dejavu-mono gettext graphviz libaec0 libaom3 libblas3 libcairo2 80s libcdt6 libcgraph8 libdatrie1 libde265-0 libdeflate0 libfontconfig1 libgd3 80s libgfortran5 libgomp1 libgraphite2-3 libgvc7 libgvplugin-gd8 80s libgvplugin-pango8 libgvpr2 libharfbuzz0b libhdf5-310 libhdf5-hl-310 80s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libimagequant0 80s libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-underscore libjson-perl 80s liblapack3 liblerc4 libltdl7 liblzf1 libpango-1.0-0 libpangocairo-1.0-0 80s libpangoft2-1.0-0 libpathplan4 libpixman-1-0 libqhull-r8.0 libsharpyuv0 80s libsz2 libthai-data libthai0 libtiff6 libwebp7 libxcb-render0 libxcb-shm0 80s libxdot4 libxpm4 libxrender1 libxslt1.1 python-nipype-doc python3-acres 80s python3-alabaster python3-all python3-ci-info python3-click 80s python3-decorator python3-deepdiff python3-defusedxml python3-dipy 80s python3-dipy-lib python3-docutils python3-etelemetry python3-execnet 80s python3-filelock python3-h5py python3-h5py-serial python3-imagesize 80s python3-iniconfig python3-jsonpickle python3-looseversion python3-lxml 80s python3-networkx python3-nibabel python3-nipype python3-numpy 80s python3-numpy-dev python3-orderly-set python3-pandas python3-pandas-lib 80s python3-pluggy python3-prov python3-psutil python3-puremagic python3-pydot 80s python3-pytest python3-pytest-xdist python3-pytz python3-rdflib 80s python3-roman-numerals python3-scipy python3-setuptools-scm 80s python3-simplejson python3-snowballstemmer python3-sphinx python3-tqdm 80s python3-traits python3-trx-python python3.13 python3.13-minimal quilt 80s sgml-base sphinx-common xml-core 80s 0 upgraded, 115 newly installed, 0 to remove and 0 not upgraded. 80s Need to get 96.2 MB of archives. 80s After this operation, 537 MB of additional disk space will be used. 80s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3.13-minimal ppc64el 3.13.11-1 [2571 kB] 80s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-numpy-dev ppc64el 1:2.3.5+ds-3 [153 kB] 80s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libblas3 ppc64el 3.12.1-7ubuntu1 [291 kB] 80s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgfortran5 ppc64el 15.2.0-11ubuntu1 [620 kB] 80s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblapack3 ppc64el 3.12.1-7ubuntu1 [2960 kB] 81s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-numpy ppc64el 1:2.3.5+ds-3 [5722 kB] 81s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3.13 ppc64el 3.13.11-1 [758 kB] 81s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el diffstat ppc64el 1.68-1 [34.9 kB] 81s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el sgml-base all 1.31+nmu1 [11.0 kB] 81s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el xml-core all 0.19build1 [20.3 kB] 81s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el docutils-common all 0.22.4+dfsg-1 [130 kB] 81s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-mono all 2.37-8build1 [502 kB] 82s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el fonts-dejavu-core all 2.37-8build1 [834 kB] 82s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig-config ppc64el 2.15.0-2.4ubuntu1 [38.2 kB] 82s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el libfontconfig1 ppc64el 2.15.0-2.4ubuntu1 [190 kB] 82s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el fontconfig ppc64el 2.15.0-2.4ubuntu1 [192 kB] 82s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-11ubuntu1 [169 kB] 82s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el gettext ppc64el 0.23.2-1 [1177 kB] 82s Get:19 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libcdt6 ppc64el 14.1.1-2ubuntu2 [24.2 kB] 82s Get:20 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libcgraph8 ppc64el 14.1.1-2ubuntu2 [66.6 kB] 82s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el libltdl7 ppc64el 2.5.4-9 [51.5 kB] 82s Get:22 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libpathplan4 ppc64el 14.1.1-2ubuntu2 [32.4 kB] 82s Get:23 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libxdot4 ppc64el 14.1.1-2ubuntu2 [31.3 kB] 82s Get:24 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgvc7 ppc64el 14.1.1-2ubuntu2 [486 kB] 82s Get:25 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgvpr2 ppc64el 14.1.1-2ubuntu2 [150 kB] 82s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpixman-1-0 ppc64el 0.46.4-1 [347 kB] 82s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-render0 ppc64el 1.17.0-2build1 [17.2 kB] 82s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxcb-shm0 ppc64el 1.17.0-2build1 [6078 B] 82s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxrender1 ppc64el 1:0.9.12-1 [23.0 kB] 82s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcairo2 ppc64el 1.18.4-3 [759 kB] 82s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1build1 [24.7 kB] 82s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el libaom3 ppc64el 3.13.1-2 [2908 kB] 82s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif-plugin-aomdec ppc64el 1.21.2-1 [14.4 kB] 82s Get:34 http://ftpmaster.internal/ubuntu resolute/main ppc64el libde265-0 ppc64el 1.0.16-1build1 [300 kB] 82s Get:35 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif-plugin-libde265 ppc64el 1.21.2-1 [10.2 kB] 82s Get:36 http://ftpmaster.internal/ubuntu resolute/main ppc64el libheif1 ppc64el 1.21.2-1 [657 kB] 82s Get:37 http://ftpmaster.internal/ubuntu resolute/main ppc64el libimagequant0 ppc64el 2.18.0-1build1 [43.2 kB] 82s Get:38 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-4ubuntu2 [215 kB] 82s Get:39 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 82s Get:40 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdeflate0 ppc64el 1.23-2 [63.3 kB] 82s Get:41 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu3 [37.1 kB] 82s Get:42 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu2 [315 kB] 82s Get:43 http://ftpmaster.internal/ubuntu resolute/main ppc64el libwebp7 ppc64el 1.5.0-0.1build1 [330 kB] 82s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu3 [307 kB] 82s Get:45 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxpm4 ppc64el 1:3.5.17-1build3 [50.5 kB] 82s Get:46 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgd3 ppc64el 2.3.3-13ubuntu1 [165 kB] 82s Get:47 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgvplugin-gd8 ppc64el 14.1.1-2ubuntu2 [31.3 kB] 82s Get:48 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgraphite2-3 ppc64el 1.3.14-11ubuntu1 [85.3 kB] 82s Get:49 http://ftpmaster.internal/ubuntu resolute/main ppc64el libharfbuzz0b ppc64el 12.3.0-4 [674 kB] 82s Get:50 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai-data all 0.1.30-1 [155 kB] 82s Get:51 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdatrie1 ppc64el 0.2.14-1 [22.7 kB] 82s Get:52 http://ftpmaster.internal/ubuntu resolute/main ppc64el libthai0 ppc64el 0.1.30-1 [22.5 kB] 82s Get:53 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpango-1.0-0 ppc64el 1.56.4-1 [282 kB] 82s Get:54 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangoft2-1.0-0 ppc64el 1.56.4-1 [61.1 kB] 82s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpangocairo-1.0-0 ppc64el 1.56.4-1 [30.9 kB] 82s Get:56 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libgvplugin-pango8 ppc64el 14.1.1-2ubuntu2 [29.7 kB] 82s Get:57 http://ftpmaster.internal/ubuntu resolute/universe ppc64el graphviz ppc64el 14.1.1-2ubuntu2 [58.6 kB] 82s Get:58 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libaec0 ppc64el 1.1.4-2 [30.3 kB] 82s Get:59 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libsz2 ppc64el 1.1.4-2 [5646 B] 82s Get:60 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-310 ppc64el 1.14.5+repack-4 [1543 kB] 82s Get:61 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libhdf5-hl-310 ppc64el 1.14.5+repack-4 [76.2 kB] 82s Get:62 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 82s Get:63 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjs-underscore all 1.13.7~dfsg+~1.13.0-1 [86.4 kB] 82s Get:64 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjson-perl all 4.10000-1 [81.9 kB] 82s Get:65 http://ftpmaster.internal/ubuntu resolute/universe ppc64el liblzf1 ppc64el 3.6-4build1 [8064 B] 82s Get:66 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libqhull-r8.0 ppc64el 2020.2-8 [227 kB] 83s Get:67 http://ftpmaster.internal/ubuntu resolute/main ppc64el libxslt1.1 ppc64el 1.1.43-0.3 [190 kB] 83s Get:68 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python-nipype-doc all 1.10.0-1 [1243 kB] 83s Get:69 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-acres all 0.5.0-2 [8256 B] 83s Get:70 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el python3-all ppc64el 3.14.2-1 [890 B] 83s Get:71 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-ci-info all 0.3.0-1build1 [7556 B] 83s Get:72 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-click all 8.2.0+0.really.8.1.8-1build1 [80.2 kB] 83s Get:73 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-decorator all 5.2.1-2 [28.1 kB] 83s Get:74 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-jsonpickle all 4.0.2+dfsg-2 [40.1 kB] 83s Get:75 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-orderly-set all 5.5.0-2 [15.3 kB] 83s Get:76 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-deepdiff all 8.6.1-1 [75.5 kB] 83s Get:77 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-defusedxml all 0.7.1-3build1 [42.4 kB] 83s Get:78 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-h5py-serial ppc64el 3.15.1-4 [1668 kB] 83s Get:79 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-h5py all 3.15.1-4 [11.3 kB] 83s Get:80 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-scipy ppc64el 1.16.3-3 [20.6 MB] 85s Get:81 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-nibabel all 5.3.3-1 [2699 kB] 85s Get:82 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-tqdm all 4.67.1-7 [93.3 kB] 85s Get:83 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-setuptools-scm all 8.2.1-4 [32.8 kB] 85s Get:84 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-trx-python all 0.3-2 [41.0 kB] 85s Get:85 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-dipy-lib ppc64el 1.11.0-3 [4200 kB] 86s Get:86 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-dipy all 1.11.0-3 [3623 kB] 86s Get:87 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-roman-numerals all 4.1.0-1 [8660 B] 86s Get:88 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-docutils all 0.22.4+dfsg-1 [439 kB] 86s Get:89 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-etelemetry all 0.3.1-1build1 [7550 B] 86s Get:90 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-execnet all 2.1.1-1build1 [33.5 kB] 86s Get:91 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-filelock all 3.20.3-1 [13.5 kB] 86s Get:92 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-imagesize all 1.4.1-1build1 [6900 B] 86s Get:93 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-iniconfig all 2.1.0-2 [6962 B] 86s Get:94 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-looseversion all 1.3.0-3build1 [8498 B] 86s Get:95 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-lxml ppc64el 6.0.2-1 [2452 kB] 86s Get:96 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-networkx all 3.2.1-4ubuntu2 [11.8 MB] 87s Get:97 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-rdflib all 7.1.1-3 [427 kB] 87s Get:98 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pydot all 4.0.1-1 [35.8 kB] 87s Get:99 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-prov all 2.1.1-1 [101 kB] 87s Get:100 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-puremagic all 1.30-1 [39.5 kB] 87s Get:101 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-simplejson ppc64el 3.20.1-1build1 [69.2 kB] 87s Get:102 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-traits ppc64el 6.4.3-2build3 [4100 kB] 88s Get:103 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-psutil ppc64el 7.1.0-1ubuntu1 [192 kB] 88s Get:104 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-nipype all 1.10.0-1 [1961 kB] 88s Get:105 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pytz all 2025.2-5 [32.4 kB] 88s Get:106 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pandas-lib ppc64el 2.3.3+dfsg-3 [7213 kB] 88s Get:107 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pandas all 2.3.3+dfsg-3 [2948 kB] 89s Get:108 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pluggy all 1.6.0-2 [21.1 kB] 89s Get:109 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pytest all 9.0.2-2 [277 kB] 89s Get:110 http://ftpmaster.internal/ubuntu resolute/universe ppc64el python3-pytest-xdist all 3.8.0-4 [34.7 kB] 89s Get:111 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-snowballstemmer all 3.0.1-1 [65.9 kB] 89s Get:112 http://ftpmaster.internal/ubuntu resolute/main ppc64el sphinx-common all 8.2.3-12 [657 kB] 89s Get:113 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-alabaster all 0.7.16-0.1build1 [18.6 kB] 89s Get:114 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-sphinx all 8.2.3-12 [483 kB] 89s Get:115 http://ftpmaster.internal/ubuntu resolute/universe ppc64el quilt all 0.68-1 [439 kB] 89s Fetched 96.2 MB in 9s (10.8 MB/s) 89s Selecting previously unselected package python3.13-minimal. 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 121571 files and directories currently installed.) 89s Preparing to unpack .../000-python3.13-minimal_3.13.11-1_ppc64el.deb ... 89s Unpacking python3.13-minimal (3.13.11-1) ... 89s Selecting previously unselected package python3-numpy-dev:ppc64el. 89s Preparing to unpack .../001-python3-numpy-dev_1%3a2.3.5+ds-3_ppc64el.deb ... 89s Unpacking python3-numpy-dev:ppc64el (1:2.3.5+ds-3) ... 89s Selecting previously unselected package libblas3:ppc64el. 89s Preparing to unpack .../002-libblas3_3.12.1-7ubuntu1_ppc64el.deb ... 89s Unpacking libblas3:ppc64el (3.12.1-7ubuntu1) ... 89s Selecting previously unselected package libgfortran5:ppc64el. 89s Preparing to unpack .../003-libgfortran5_15.2.0-11ubuntu1_ppc64el.deb ... 89s Unpacking libgfortran5:ppc64el (15.2.0-11ubuntu1) ... 89s Selecting previously unselected package liblapack3:ppc64el. 89s Preparing to unpack .../004-liblapack3_3.12.1-7ubuntu1_ppc64el.deb ... 89s Unpacking liblapack3:ppc64el (3.12.1-7ubuntu1) ... 89s Selecting previously unselected package python3-numpy. 89s Preparing to unpack .../005-python3-numpy_1%3a2.3.5+ds-3_ppc64el.deb ... 89s Unpacking python3-numpy (1:2.3.5+ds-3) ... 90s Selecting previously unselected package python3.13. 90s Preparing to unpack .../006-python3.13_3.13.11-1_ppc64el.deb ... 90s Unpacking python3.13 (3.13.11-1) ... 90s Selecting previously unselected package diffstat. 90s Preparing to unpack .../007-diffstat_1.68-1_ppc64el.deb ... 90s Unpacking diffstat (1.68-1) ... 90s Selecting previously unselected package sgml-base. 90s Preparing to unpack .../008-sgml-base_1.31+nmu1_all.deb ... 90s Unpacking sgml-base (1.31+nmu1) ... 90s Selecting previously unselected package xml-core. 90s Preparing to unpack .../009-xml-core_0.19build1_all.deb ... 90s Unpacking xml-core (0.19build1) ... 90s Selecting previously unselected package docutils-common. 90s Preparing to unpack .../010-docutils-common_0.22.4+dfsg-1_all.deb ... 90s Unpacking docutils-common (0.22.4+dfsg-1) ... 90s Selecting previously unselected package fonts-dejavu-mono. 90s Preparing to unpack .../011-fonts-dejavu-mono_2.37-8build1_all.deb ... 90s Unpacking fonts-dejavu-mono (2.37-8build1) ... 90s Selecting previously unselected package fonts-dejavu-core. 90s Preparing to unpack .../012-fonts-dejavu-core_2.37-8build1_all.deb ... 90s Unpacking fonts-dejavu-core (2.37-8build1) ... 90s Selecting previously unselected package fontconfig-config. 90s Preparing to unpack .../013-fontconfig-config_2.15.0-2.4ubuntu1_ppc64el.deb ... 90s Unpacking fontconfig-config (2.15.0-2.4ubuntu1) ... 90s Selecting previously unselected package libfontconfig1:ppc64el. 90s Preparing to unpack .../014-libfontconfig1_2.15.0-2.4ubuntu1_ppc64el.deb ... 90s Unpacking libfontconfig1:ppc64el (2.15.0-2.4ubuntu1) ... 90s Selecting previously unselected package fontconfig. 90s Preparing to unpack .../015-fontconfig_2.15.0-2.4ubuntu1_ppc64el.deb ... 90s Unpacking fontconfig (2.15.0-2.4ubuntu1) ... 90s Selecting previously unselected package libgomp1:ppc64el. 90s Preparing to unpack .../016-libgomp1_15.2.0-11ubuntu1_ppc64el.deb ... 90s Unpacking libgomp1:ppc64el (15.2.0-11ubuntu1) ... 90s Selecting previously unselected package gettext. 90s Preparing to unpack .../017-gettext_0.23.2-1_ppc64el.deb ... 90s Unpacking gettext (0.23.2-1) ... 90s Selecting previously unselected package libcdt6:ppc64el. 90s Preparing to unpack .../018-libcdt6_14.1.1-2ubuntu2_ppc64el.deb ... 90s Unpacking libcdt6:ppc64el (14.1.1-2ubuntu2) ... 90s Selecting previously unselected package libcgraph8:ppc64el. 90s Preparing to unpack .../019-libcgraph8_14.1.1-2ubuntu2_ppc64el.deb ... 90s Unpacking libcgraph8:ppc64el (14.1.1-2ubuntu2) ... 90s Selecting previously unselected package libltdl7:ppc64el. 90s Preparing to unpack .../020-libltdl7_2.5.4-9_ppc64el.deb ... 90s Unpacking libltdl7:ppc64el (2.5.4-9) ... 90s Selecting previously unselected package libpathplan4:ppc64el. 90s Preparing to unpack .../021-libpathplan4_14.1.1-2ubuntu2_ppc64el.deb ... 90s Unpacking libpathplan4:ppc64el (14.1.1-2ubuntu2) ... 90s Selecting previously unselected package libxdot4:ppc64el. 90s Preparing to unpack .../022-libxdot4_14.1.1-2ubuntu2_ppc64el.deb ... 90s Unpacking libxdot4:ppc64el (14.1.1-2ubuntu2) ... 90s Selecting previously unselected package libgvc7:ppc64el. 90s Preparing to unpack .../023-libgvc7_14.1.1-2ubuntu2_ppc64el.deb ... 90s Unpacking libgvc7:ppc64el (14.1.1-2ubuntu2) ... 90s Selecting previously unselected package libgvpr2:ppc64el. 90s Preparing to unpack .../024-libgvpr2_14.1.1-2ubuntu2_ppc64el.deb ... 90s Unpacking libgvpr2:ppc64el (14.1.1-2ubuntu2) ... 90s Selecting previously unselected package libpixman-1-0:ppc64el. 90s Preparing to unpack .../025-libpixman-1-0_0.46.4-1_ppc64el.deb ... 90s Unpacking libpixman-1-0:ppc64el (0.46.4-1) ... 90s Selecting previously unselected package libxcb-render0:ppc64el. 90s Preparing to unpack .../026-libxcb-render0_1.17.0-2build1_ppc64el.deb ... 90s Unpacking libxcb-render0:ppc64el (1.17.0-2build1) ... 90s Selecting previously unselected package libxcb-shm0:ppc64el. 90s Preparing to unpack .../027-libxcb-shm0_1.17.0-2build1_ppc64el.deb ... 90s Unpacking libxcb-shm0:ppc64el (1.17.0-2build1) ... 90s Selecting previously unselected package libxrender1:ppc64el. 90s Preparing to unpack .../028-libxrender1_1%3a0.9.12-1_ppc64el.deb ... 90s Unpacking libxrender1:ppc64el (1:0.9.12-1) ... 90s Selecting previously unselected package libcairo2:ppc64el. 90s Preparing to unpack .../029-libcairo2_1.18.4-3_ppc64el.deb ... 90s Unpacking libcairo2:ppc64el (1.18.4-3) ... 90s Selecting previously unselected package libsharpyuv0:ppc64el. 90s Preparing to unpack .../030-libsharpyuv0_1.5.0-0.1build1_ppc64el.deb ... 90s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1build1) ... 90s Selecting previously unselected package libaom3:ppc64el. 90s Preparing to unpack .../031-libaom3_3.13.1-2_ppc64el.deb ... 90s Unpacking libaom3:ppc64el (3.13.1-2) ... 91s Selecting previously unselected package libheif-plugin-aomdec:ppc64el. 91s Preparing to unpack .../032-libheif-plugin-aomdec_1.21.2-1_ppc64el.deb ... 91s Unpacking libheif-plugin-aomdec:ppc64el (1.21.2-1) ... 91s Selecting previously unselected package libde265-0:ppc64el. 91s Preparing to unpack .../033-libde265-0_1.0.16-1build1_ppc64el.deb ... 91s Unpacking libde265-0:ppc64el (1.0.16-1build1) ... 91s Selecting previously unselected package libheif-plugin-libde265:ppc64el. 91s Preparing to unpack .../034-libheif-plugin-libde265_1.21.2-1_ppc64el.deb ... 91s Unpacking libheif-plugin-libde265:ppc64el (1.21.2-1) ... 91s Selecting previously unselected package libheif1:ppc64el. 91s Preparing to unpack .../035-libheif1_1.21.2-1_ppc64el.deb ... 91s Unpacking libheif1:ppc64el (1.21.2-1) ... 91s Selecting previously unselected package libimagequant0:ppc64el. 91s Preparing to unpack .../036-libimagequant0_2.18.0-1build1_ppc64el.deb ... 91s Unpacking libimagequant0:ppc64el (2.18.0-1build1) ... 91s Selecting previously unselected package libjpeg-turbo8:ppc64el. 91s Preparing to unpack .../037-libjpeg-turbo8_2.1.5-4ubuntu2_ppc64el.deb ... 91s Unpacking libjpeg-turbo8:ppc64el (2.1.5-4ubuntu2) ... 91s Selecting previously unselected package libjpeg8:ppc64el. 91s Preparing to unpack .../038-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 91s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 91s Selecting previously unselected package libdeflate0:ppc64el. 91s Preparing to unpack .../039-libdeflate0_1.23-2_ppc64el.deb ... 91s Unpacking libdeflate0:ppc64el (1.23-2) ... 91s Selecting previously unselected package libjbig0:ppc64el. 91s Preparing to unpack .../040-libjbig0_2.1-6.1ubuntu3_ppc64el.deb ... 91s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu3) ... 91s Selecting previously unselected package liblerc4:ppc64el. 91s Preparing to unpack .../041-liblerc4_4.0.0+ds-5ubuntu2_ppc64el.deb ... 91s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu2) ... 91s Selecting previously unselected package libwebp7:ppc64el. 91s Preparing to unpack .../042-libwebp7_1.5.0-0.1build1_ppc64el.deb ... 91s Unpacking libwebp7:ppc64el (1.5.0-0.1build1) ... 91s Selecting previously unselected package libtiff6:ppc64el. 91s Preparing to unpack .../043-libtiff6_4.7.0-3ubuntu3_ppc64el.deb ... 91s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu3) ... 91s Selecting previously unselected package libxpm4:ppc64el. 91s Preparing to unpack .../044-libxpm4_1%3a3.5.17-1build3_ppc64el.deb ... 91s Unpacking libxpm4:ppc64el (1:3.5.17-1build3) ... 91s Selecting previously unselected package libgd3:ppc64el. 91s Preparing to unpack .../045-libgd3_2.3.3-13ubuntu1_ppc64el.deb ... 91s Unpacking libgd3:ppc64el (2.3.3-13ubuntu1) ... 91s Selecting previously unselected package libgvplugin-gd8:ppc64el. 91s Preparing to unpack .../046-libgvplugin-gd8_14.1.1-2ubuntu2_ppc64el.deb ... 91s Unpacking libgvplugin-gd8:ppc64el (14.1.1-2ubuntu2) ... 91s Selecting previously unselected package libgraphite2-3:ppc64el. 91s Preparing to unpack .../047-libgraphite2-3_1.3.14-11ubuntu1_ppc64el.deb ... 91s Unpacking libgraphite2-3:ppc64el (1.3.14-11ubuntu1) ... 91s Selecting previously unselected package libharfbuzz0b:ppc64el. 91s Preparing to unpack .../048-libharfbuzz0b_12.3.0-4_ppc64el.deb ... 91s Unpacking libharfbuzz0b:ppc64el (12.3.0-4) ... 91s Selecting previously unselected package libthai-data. 91s Preparing to unpack .../049-libthai-data_0.1.30-1_all.deb ... 91s Unpacking libthai-data (0.1.30-1) ... 91s Selecting previously unselected package libdatrie1:ppc64el. 91s Preparing to unpack .../050-libdatrie1_0.2.14-1_ppc64el.deb ... 91s Unpacking libdatrie1:ppc64el (0.2.14-1) ... 91s Selecting previously unselected package libthai0:ppc64el. 91s Preparing to unpack .../051-libthai0_0.1.30-1_ppc64el.deb ... 91s Unpacking libthai0:ppc64el (0.1.30-1) ... 91s Selecting previously unselected package libpango-1.0-0:ppc64el. 91s Preparing to unpack .../052-libpango-1.0-0_1.56.4-1_ppc64el.deb ... 91s Unpacking libpango-1.0-0:ppc64el (1.56.4-1) ... 91s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 91s Preparing to unpack .../053-libpangoft2-1.0-0_1.56.4-1_ppc64el.deb ... 91s Unpacking libpangoft2-1.0-0:ppc64el (1.56.4-1) ... 91s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 91s Preparing to unpack .../054-libpangocairo-1.0-0_1.56.4-1_ppc64el.deb ... 91s Unpacking libpangocairo-1.0-0:ppc64el (1.56.4-1) ... 91s Selecting previously unselected package libgvplugin-pango8:ppc64el. 91s Preparing to unpack .../055-libgvplugin-pango8_14.1.1-2ubuntu2_ppc64el.deb ... 91s Unpacking libgvplugin-pango8:ppc64el (14.1.1-2ubuntu2) ... 91s Selecting previously unselected package graphviz. 91s Preparing to unpack .../056-graphviz_14.1.1-2ubuntu2_ppc64el.deb ... 91s Unpacking graphviz (14.1.1-2ubuntu2) ... 91s Selecting previously unselected package libaec0:ppc64el. 91s Preparing to unpack .../057-libaec0_1.1.4-2_ppc64el.deb ... 91s Unpacking libaec0:ppc64el (1.1.4-2) ... 91s Selecting previously unselected package libsz2:ppc64el. 91s Preparing to unpack .../058-libsz2_1.1.4-2_ppc64el.deb ... 91s Unpacking libsz2:ppc64el (1.1.4-2) ... 91s Selecting previously unselected package libhdf5-310:ppc64el. 91s Preparing to unpack .../059-libhdf5-310_1.14.5+repack-4_ppc64el.deb ... 91s Unpacking libhdf5-310:ppc64el (1.14.5+repack-4) ... 91s Selecting previously unselected package libhdf5-hl-310:ppc64el. 91s Preparing to unpack .../060-libhdf5-hl-310_1.14.5+repack-4_ppc64el.deb ... 91s Unpacking libhdf5-hl-310:ppc64el (1.14.5+repack-4) ... 91s Selecting previously unselected package libjs-jquery. 91s Preparing to unpack .../061-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 91s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 91s Selecting previously unselected package libjs-underscore. 91s Preparing to unpack .../062-libjs-underscore_1.13.7~dfsg+~1.13.0-1_all.deb ... 91s Unpacking libjs-underscore (1.13.7~dfsg+~1.13.0-1) ... 91s Selecting previously unselected package libjson-perl. 91s Preparing to unpack .../063-libjson-perl_4.10000-1_all.deb ... 91s Unpacking libjson-perl (4.10000-1) ... 91s Selecting previously unselected package liblzf1:ppc64el. 91s Preparing to unpack .../064-liblzf1_3.6-4build1_ppc64el.deb ... 91s Unpacking liblzf1:ppc64el (3.6-4build1) ... 91s Selecting previously unselected package libqhull-r8.0:ppc64el. 91s Preparing to unpack .../065-libqhull-r8.0_2020.2-8_ppc64el.deb ... 91s Unpacking libqhull-r8.0:ppc64el (2020.2-8) ... 91s Selecting previously unselected package libxslt1.1:ppc64el. 91s Preparing to unpack .../066-libxslt1.1_1.1.43-0.3_ppc64el.deb ... 91s Unpacking libxslt1.1:ppc64el (1.1.43-0.3) ... 91s Selecting previously unselected package python-nipype-doc. 91s Preparing to unpack .../067-python-nipype-doc_1.10.0-1_all.deb ... 91s Unpacking python-nipype-doc (1.10.0-1) ... 91s Selecting previously unselected package python3-acres. 91s Preparing to unpack .../068-python3-acres_0.5.0-2_all.deb ... 91s Unpacking python3-acres (0.5.0-2) ... 91s Selecting previously unselected package python3-all. 91s Preparing to unpack .../069-python3-all_3.14.2-1_ppc64el.deb ... 91s Unpacking python3-all (3.14.2-1) ... 91s Selecting previously unselected package python3-ci-info. 91s Preparing to unpack .../070-python3-ci-info_0.3.0-1build1_all.deb ... 91s Unpacking python3-ci-info (0.3.0-1build1) ... 91s Selecting previously unselected package python3-click. 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unselected package python3-setuptools-scm. 92s Preparing to unpack .../082-python3-setuptools-scm_8.2.1-4_all.deb ... 92s Unpacking python3-setuptools-scm (8.2.1-4) ... 93s Selecting previously unselected package python3-trx-python. 93s Preparing to unpack .../083-python3-trx-python_0.3-2_all.deb ... 93s Unpacking python3-trx-python (0.3-2) ... 93s Selecting previously unselected package python3-dipy-lib:ppc64el. 93s Preparing to unpack .../084-python3-dipy-lib_1.11.0-3_ppc64el.deb ... 93s Unpacking python3-dipy-lib:ppc64el (1.11.0-3) ... 93s Selecting previously unselected package python3-dipy. 93s Preparing to unpack .../085-python3-dipy_1.11.0-3_all.deb ... 93s Unpacking python3-dipy (1.11.0-3) ... 93s Selecting previously unselected package python3-roman-numerals. 93s Preparing to unpack .../086-python3-roman-numerals_4.1.0-1_all.deb ... 93s Unpacking python3-roman-numerals (4.1.0-1) ... 93s Selecting previously unselected package python3-docutils. 93s Preparing to unpack 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up python3-acres (0.5.0-2) ... 98s Setting up libqhull-r8.0:ppc64el (2020.2-8) ... 98s Setting up python3-pytz (2025.2-5) ... 98s Setting up libxcb-shm0:ppc64el (1.17.0-2build1) ... 98s Setting up libgomp1:ppc64el (15.2.0-11ubuntu1) ... 98s Setting up python3-click (8.2.0+0.really.8.1.8-1build1) ... 98s Setting up python3-networkx (3.2.1-4ubuntu2) ... 101s Setting up libjbig0:ppc64el (2.1-6.1ubuntu3) ... 101s Setting up python3-setuptools-scm (8.2.1-4) ... 101s Setting up libaec0:ppc64el (1.1.4-2) ... 101s Setting up python3-psutil (7.1.0-1ubuntu1) ... 102s Setting up python3-simplejson (3.20.1-1build1) ... 102s Setting up python3-puremagic (1.30-1) ... 102s Setting up python3-decorator (5.2.1-2) ... 102s Setting up libblas3:ppc64el (3.12.1-7ubuntu1) ... 102s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 102s Setting up python3-orderly-set (5.5.0-2) ... 102s Setting up python3-snowballstemmer (3.0.1-1) ... 103s Setting up libpathplan4:ppc64el (14.1.1-2ubuntu2) ... 103s Setting up liblzf1:ppc64el (3.6-4build1) ... 103s Setting up diffstat (1.68-1) ... 103s Setting up libimagequant0:ppc64el (2.18.0-1build1) ... 103s Setting up fonts-dejavu-mono (2.37-8build1) ... 103s Setting up python3-numpy-dev:ppc64el (1:2.3.5+ds-3) ... 103s Setting up fonts-dejavu-core (2.37-8build1) ... 103s Setting up libjpeg-turbo8:ppc64el (2.1.5-4ubuntu2) ... 103s Setting up libltdl7:ppc64el (2.5.4-9) ... 103s Setting up libgfortran5:ppc64el (15.2.0-11ubuntu1) ... 103s Setting up python3-ci-info (0.3.0-1build1) ... 103s Setting up python3-pluggy (1.6.0-2) ... 103s Setting up libcgraph8:ppc64el (14.1.1-2ubuntu2) ... 103s Setting up libwebp7:ppc64el (1.5.0-0.1build1) ... 103s Setting up libgvpr2:ppc64el (14.1.1-2ubuntu2) ... 103s Setting up python3-looseversion (1.3.0-3build1) ... 104s Setting up python3-rdflib (7.1.1-3) ... 104s Setting up libjson-perl 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python3.13 (3.13.11-1) ... 107s Setting up fontconfig-config (2.15.0-2.4ubuntu1) ... 108s Setting up python3-pytest (9.0.2-2) ... 108s Setting up python3-all (3.14.2-1) ... 108s Setting up quilt (0.68-1) ... 108s Setting up python3-etelemetry (0.3.1-1build1) ... 108s Setting up libthai0:ppc64el (0.1.30-1) ... 108s Setting up python-nipype-doc (1.10.0-1) ... 108s Setting up sphinx-common (8.2.3-12) ... 108s Setting up python3-numpy (1:2.3.5+ds-3) ... 112s Setting up libgvc7:ppc64el (14.1.1-2ubuntu2) ... 112s Setting up libhdf5-310:ppc64el (1.14.5+repack-4) ... 112s Setting up python3-lxml:ppc64el (6.0.2-1) ... 112s Setting up libtiff6:ppc64el (4.7.0-3ubuntu3) ... 112s Setting up xml-core (0.19build1) ... 113s Setting up libfontconfig1:ppc64el (2.15.0-2.4ubuntu1) ... 113s Setting up libhdf5-hl-310:ppc64el (1.14.5+repack-4) ... 113s Setting up fontconfig (2.15.0-2.4ubuntu1) ... 115s Regenerating fonts cache... done. 115s Setting up python3-deepdiff (8.6.1-1) ... 115s Setting up python3-scipy (1.16.3-3) ... 122s Setting up python3-pytest-xdist (3.8.0-4) ... 123s Setting up python3-pandas-lib:ppc64el (2.3.3+dfsg-3) ... 123s Setting up libpango-1.0-0:ppc64el (1.56.4-1) ... 123s Setting up python3-h5py-serial (3.15.1-4) ... 123s Setting up libcairo2:ppc64el (1.18.4-3) ... 123s Setting up python3-dipy-lib:ppc64el (1.11.0-3) ... 123s Setting up python3-pandas (2.3.3+dfsg-3) ... 132s Setting up python3-nibabel (5.3.3-1) ... 133s Setting up python3-h5py (3.15.1-4) ... 134s Setting up libpangoft2-1.0-0:ppc64el (1.56.4-1) ... 134s Setting up libpangocairo-1.0-0:ppc64el (1.56.4-1) ... 134s Setting up python3-trx-python (0.3-2) ... 134s Setting up libgvplugin-pango8:ppc64el (14.1.1-2ubuntu2) ... 134s Setting up python3-dipy (1.11.0-3) ... 135s Setting up libheif-plugin-aomdec:ppc64el (1.21.2-1) ... 135s Setting up libheif-plugin-libde265:ppc64el (1.21.2-1) ... 135s Setting up libheif1:ppc64el (1.21.2-1) ... 135s Setting up libgd3:ppc64el (2.3.3-13ubuntu1) ... 135s Setting up libgvplugin-gd8:ppc64el (14.1.1-2ubuntu2) ... 135s Setting up graphviz (14.1.1-2ubuntu2) ... 135s Setting up python3-pydot (4.0.1-1) ... 136s Setting up python3-prov (2.1.1-1) ... 136s Setting up python3-nipype (1.10.0-1) ... 139s Processing triggers for systemd (259-1ubuntu2) ... 139s Processing triggers for man-db (2.13.1-1) ... 140s Processing triggers for install-info (7.2-5) ... 140s Processing triggers for libc-bin (2.42-2ubuntu4) ... 140s Processing triggers for sgml-base (1.31+nmu1) ... 140s Setting up docutils-common (0.22.4+dfsg-1) ... 141s Processing triggers for sgml-base (1.31+nmu1) ... 141s Setting up python3-docutils (0.22.4+dfsg-1) ... 141s Setting up python3-sphinx (8.2.3-12) ... 144s autopkgtest [19:08:39]: test run-unit-test: [----------------------- 144s File series fully applied, ends at patch debian/patches/stabilize-makefiles.patch 144s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 144s Skip following Tests: not nipype.interfaces.io.BIDSDataGrabber 144s Testing with python3.13 in /tmp/autopkgtest.IGlRUe/autopkgtest_tmp: 145s ============================= test session starts ============================== 145s platform linux -- Python 3.13.11, pytest-9.0.2, pluggy-1.6.0 -- /usr/bin/python3.13 145s cachedir: .pytest_cache 145s rootdir: /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype 145s configfile: pytest.ini 145s plugins: typeguard-4.4.4, xdist-3.8.0 156s collecting ... collected 3014 items / 1 deselected / 3013 selected 156s 156s nipype/algorithms/confounds.py::nipype.algorithms.confounds.CompCor PASSED [ 0%] 156s nipype/algorithms/confounds.py::nipype.algorithms.confounds.TCompCor PASSED [ 0%] 156s nipype/algorithms/confounds.py::nipype.algorithms.confounds.TSNR PASSED [ 0%] 156s nipype/algorithms/metrics.py::nipype.algorithms.metrics.ErrorMap PASSED [ 0%] 156s nipype/algorithms/metrics.py::nipype.algorithms.metrics.FuzzyOverlap PASSED [ 0%] 156s 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nipype/interfaces/fsl/tests/test_auto_FindTheBiggest.py::test_FindTheBiggest_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_GLM.py::test_GLM_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_GLM.py::test_GLM_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ICA_AROMA.py::test_ICA_AROMA_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ICA_AROMA.py::test_ICA_AROMA_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ImageMaths.py::test_ImageMaths_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ImageMaths.py::test_ImageMaths_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ImageMeants.py::test_ImageMeants_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ImageMeants.py::test_ImageMeants_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ImageStats.py::test_ImageStats_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_ImageStats.py::test_ImageStats_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_InvWarp.py::test_InvWarp_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_InvWarp.py::test_InvWarp_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_IsotropicSmooth.py::test_IsotropicSmooth_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_IsotropicSmooth.py::test_IsotropicSmooth_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_L2Model.py::test_L2Model_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_L2Model.py::test_L2Model_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_Level1Design.py::test_Level1Design_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_Level1Design.py::test_Level1Design_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_MCFLIRT.py::test_MCFLIRT_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_MCFLIRT.py::test_MCFLIRT_outputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_MELODIC.py::test_MELODIC_inputs PASSED [ 44%] 164s nipype/interfaces/fsl/tests/test_auto_MELODIC.py::test_MELODIC_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MakeDyadicVectors.py::test_MakeDyadicVectors_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MakeDyadicVectors.py::test_MakeDyadicVectors_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MathsCommand.py::test_MathsCommand_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MathsCommand.py::test_MathsCommand_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MaxImage.py::test_MaxImage_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MaxImage.py::test_MaxImage_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MaxnImage.py::test_MaxnImage_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MaxnImage.py::test_MaxnImage_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MeanImage.py::test_MeanImage_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MeanImage.py::test_MeanImage_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MedianImage.py::test_MedianImage_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MedianImage.py::test_MedianImage_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_Merge.py::test_Merge_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_Merge.py::test_Merge_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MinImage.py::test_MinImage_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MinImage.py::test_MinImage_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MotionOutliers.py::test_MotionOutliers_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MotionOutliers.py::test_MotionOutliers_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MultiImageMaths.py::test_MultiImageMaths_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MultiImageMaths.py::test_MultiImageMaths_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MultipleRegressDesign.py::test_MultipleRegressDesign_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_MultipleRegressDesign.py::test_MultipleRegressDesign_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_Overlay.py::test_Overlay_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_Overlay.py::test_Overlay_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_PRELUDE.py::test_PRELUDE_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_PRELUDE.py::test_PRELUDE_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_PercentileImage.py::test_PercentileImage_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_PercentileImage.py::test_PercentileImage_outputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_PlotMotionParams.py::test_PlotMotionParams_inputs PASSED [ 45%] 164s nipype/interfaces/fsl/tests/test_auto_PlotMotionParams.py::test_PlotMotionParams_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_PlotTimeSeries.py::test_PlotTimeSeries_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_PlotTimeSeries.py::test_PlotTimeSeries_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_PowerSpectrum.py::test_PowerSpectrum_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_PowerSpectrum.py::test_PowerSpectrum_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_PrepareFieldmap.py::test_PrepareFieldmap_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_PrepareFieldmap.py::test_PrepareFieldmap_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_ProbTrackX.py::test_ProbTrackX_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_ProbTrackX.py::test_ProbTrackX_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_ProbTrackX2.py::test_ProbTrackX2_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_ProbTrackX2.py::test_ProbTrackX2_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_ProjThresh.py::test_ProjThresh_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_ProjThresh.py::test_ProjThresh_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_Randomise.py::test_Randomise_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_Randomise.py::test_Randomise_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_Reorient2Std.py::test_Reorient2Std_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_Reorient2Std.py::test_Reorient2Std_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_RobustFOV.py::test_RobustFOV_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_RobustFOV.py::test_RobustFOV_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_SMM.py::test_SMM_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_SMM.py::test_SMM_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_SUSAN.py::test_SUSAN_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_SUSAN.py::test_SUSAN_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_SigLoss.py::test_SigLoss_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_SigLoss.py::test_SigLoss_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_Slice.py::test_Slice_inputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_Slice.py::test_Slice_outputs PASSED [ 46%] 164s nipype/interfaces/fsl/tests/test_auto_SliceTimer.py::test_SliceTimer_inputs PASSED [ 46%] 164s 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nipype/interfaces/fsl/tests/test_auto_Text2Vest.py::test_Text2Vest_outputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_Threshold.py::test_Threshold_inputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_Threshold.py::test_Threshold_outputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_TractSkeleton.py::test_TractSkeleton_inputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_TractSkeleton.py::test_TractSkeleton_outputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_Training.py::test_Training_inputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_Training.py::test_Training_outputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_TrainingSetCreator.py::test_TrainingSetCreator_inputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_TrainingSetCreator.py::test_TrainingSetCreator_outputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_UnaryMaths.py::test_UnaryMaths_inputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_UnaryMaths.py::test_UnaryMaths_outputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_VecReg.py::test_VecReg_inputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_VecReg.py::test_VecReg_outputs PASSED [ 47%] 164s nipype/interfaces/fsl/tests/test_auto_Vest2Text.py::test_Vest2Text_inputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_Vest2Text.py::test_Vest2Text_outputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpPoints.py::test_WarpPoints_inputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpPoints.py::test_WarpPoints_outputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpPointsFromStd.py::test_WarpPointsFromStd_inputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpPointsFromStd.py::test_WarpPointsFromStd_outputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpPointsToStd.py::test_WarpPointsToStd_inputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpPointsToStd.py::test_WarpPointsToStd_outputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpUtils.py::test_WarpUtils_inputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_WarpUtils.py::test_WarpUtils_outputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_XFibres5.py::test_XFibres5_inputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_auto_XFibres5.py::test_XFibres5_outputs PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_fslversion SKIPPED (f...) [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_fsloutputtype SKIPPED [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_outputtype_to_ext PASSED [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_FSLCommand SKIPPED (f...) [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_FSLCommand2 SKIPPED (...) [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args0-desired_name0] SKIPPED [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args1-desired_name1] SKIPPED [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args2-desired_name2] SKIPPED [ 48%] 164s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args3-desired_name3] SKIPPED [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_dtifit2 SKIPPED (fsl i...) [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_randomise2 XFAIL (Thes...) [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_Randomise_parallel XFAIL [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_Proj_thresh XFAIL (The...) [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_Vec_reg XFAIL (These t...) [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_Find_the_biggest XFAIL [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_tbss_skeleton SKIPPED [ 48%] 164s nipype/interfaces/fsl/tests/test_dti.py::test_distancemap SKIPPED (f...) [ 48%] 164s nipype/interfaces/fsl/tests/test_epi.py::test_eddy_correct2 SKIPPED [ 48%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[None] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[GIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI_PAIR] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI_PAIR_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[None] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[GIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI_PAIR] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI_PAIR_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[None] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[GIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI_PAIR] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI_PAIR_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[None] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[GIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI_PAIR] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI_PAIR_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[None] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[GIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI_PAIR] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI_PAIR_GZ] SKIPPED [ 49%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[None] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[GIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI_PAIR] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI_PAIR_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[None] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[GIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI_PAIR] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI_PAIR_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_mask[None] SKIPPED (...) [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_mask[GIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI_PAIR] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI_PAIR_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[None] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[GIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI_PAIR] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI_PAIR_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[None] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[GIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI_PAIR] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI_PAIR_GZ] SKIPPED [ 50%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[None] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[GIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI_PAIR] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI_PAIR_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[None] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[GIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI_PAIR] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI_PAIR_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[None] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[GIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI_PAIR] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI_PAIR_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[None] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[GIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI_PAIR] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI_PAIR_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[None] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[GIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI_PAIR] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI_PAIR_GZ] SKIPPED [ 51%] 164s nipype/interfaces/fsl/tests/test_model.py::test_MultipleRegressDesign SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_bet SKIPPED (fs...) [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_fast SKIPPED (f...) [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_fast_list_outputs SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_flirt SKIPPED (...) [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_mcflirt SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_mcflirt_opt SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_mcflirt_noinput SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_fnirt SKIPPED (...) [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_applywarp SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_fugue[attr0-fmap_out_file] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_fugue[attr1-shift_out_file] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_fugue[attr2-unwarped_file] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_preprocess.py::test_first_genfname SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[None] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[GIFTI] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI_GZ] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI_PAIR] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI_PAIR_GZ] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmerge[None] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmerge[GIFTI] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmerge[NIFTI] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmerge[NIFTI_GZ] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmerge[NIFTI_PAIR] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmerge[NIFTI_PAIR_GZ] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmaths[None] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmaths[GIFTI] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmaths[NIFTI] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmaths[NIFTI_GZ] SKIPPED [ 52%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmaths[NIFTI_PAIR] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_fslmaths[NIFTI_PAIR_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_overlay[None] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_overlay[GIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_overlay[NIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_overlay[NIFTI_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_overlay[NIFTI_PAIR] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_overlay[NIFTI_PAIR_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_slicer[None] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_slicer[GIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_slicer[NIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_slicer[NIFTI_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_slicer[NIFTI_PAIR] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_slicer[NIFTI_PAIR_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plottimeseries[None] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plottimeseries[GIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plottimeseries[NIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plottimeseries[NIFTI_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plottimeseries[NIFTI_PAIR] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plottimeseries[NIFTI_PAIR_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plotmotionparams[None] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plotmotionparams[GIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plotmotionparams[NIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plotmotionparams[NIFTI_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plotmotionparams[NIFTI_PAIR] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_plotmotionparams[NIFTI_PAIR_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_convertxfm[None] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_convertxfm[GIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_convertxfm[NIFTI] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_convertxfm[NIFTI_GZ] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_convertxfm[NIFTI_PAIR] SKIPPED [ 53%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_convertxfm[NIFTI_PAIR_GZ] SKIPPED [ 54%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_swapdims[None] SKIPPED [ 54%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_swapdims[GIFTI] SKIPPED [ 54%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_swapdims[NIFTI] SKIPPED [ 54%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_swapdims[NIFTI_GZ] SKIPPED [ 54%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_swapdims[NIFTI_PAIR] SKIPPED [ 54%] 164s nipype/interfaces/fsl/tests/test_utils.py::test_swapdims[NIFTI_PAIR_GZ] SKIPPED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.AvScale PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.Complex PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.ConvertWarp PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.ConvertXFM PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.ExtractROI PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.ImageMaths PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.ImageStats PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.InvWarp PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.Merge PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.MotionOutliers PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.Overlay PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.PlotMotionParams PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.PlotTimeSeries PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.PowerSpectrum PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.Reorient2Std PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.SigLoss PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.Slice PASSED [ 54%] 164s nipype/interfaces/fsl/utils.py::nipype.interfaces.fsl.utils.Slicer PASSED [ 54%] 164s 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[ 95%] 284s nipype/testing/tests/test_utils.py::test_tempfatfs_calledprocesserror PASSED [ 95%] 284s nipype/testing/tests/test_utils.py::test_tempfatfs_oserror PASSED [ 95%] 284s nipype/tests/test_nipype.py::test_nipype_info PASSED [ 95%] 284s nipype/tests/test_nipype.py::test_git_hash SKIPPED (not able to get ...) [ 95%] 284s nipype/tests/test_nipype.py::test_no_et_bare PASSED [ 96%] 286s nipype/tests/test_nipype.py::test_no_et_multiproc[True-MultiProc] PASSED [ 96%] 288s nipype/tests/test_nipype.py::test_no_et_multiproc[True-LegacyMultiProc] PASSED [ 96%] 292s nipype/tests/test_nipype.py::test_no_et_multiproc[False-MultiProc] PASSED [ 96%] 296s nipype/tests/test_nipype.py::test_no_et_multiproc[False-LegacyMultiProc] PASSED [ 96%] 296s nipype/tests/test_sample.py::test_basic PASSED [ 96%] 296s nipype/utils/docparse.py::nipype.utils.docparse.insert_doc PASSED [ 96%] 296s nipype/utils/filemanip.py::nipype.utils.filemanip.fname_presuffix PASSED [ 96%] 296s nipype/utils/filemanip.py::nipype.utils.filemanip.hash_infile PASSED [ 96%] 296s nipype/utils/filemanip.py::nipype.utils.filemanip.read_stream PASSED [ 96%] 296s nipype/utils/filemanip.py::nipype.utils.filemanip.split_filename PASSED [ 96%] 296s nipype/utils/matlabtools.py::nipype.utils.matlabtools.mlab_tempfile PASSED [ 96%] 296s nipype/utils/misc.py::nipype.utils.misc.str2bool PASSED [ 96%] 296s nipype/utils/onetime.py::nipype.utils.onetime.setattr_on_read PASSED [ 96%] 296s nipype/utils/tests/test_cmd.py::TestNipypeCMD::test_main_returns_2_on_empty PASSED [ 96%] 296s nipype/utils/tests/test_cmd.py::TestNipypeCMD::test_main_returns_0_on_help PASSED [ 96%] 296s nipype/utils/tests/test_cmd.py::TestNipypeCMD::test_list_nipy_interfacesp PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_parse[:12] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_parse[localhost:12] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_parse[localhost:12.1] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_config[0] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_config[1] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_config[2] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_config[3] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_config[4] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_system[0] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_system[1] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_system[2] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_system[3] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_system[4] PASSED [ 96%] 296s nipype/utils/tests/test_config.py::test_display_config_and_system PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_patched PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_empty_patched PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_patched_oldxvfbwrapper PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_empty_patched_oldxvfbwrapper PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_notinstalled PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_empty_notinstalled PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_installed SKIPPED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_empty_installed SKIPPED [ 97%] 296s nipype/utils/tests/test_config.py::test_display_empty_macosx PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_cwd_cached PASSED [ 97%] 296s nipype/utils/tests/test_config.py::test_debug_mode PASSED [ 97%] 296s nipype/utils/tests/test_docparse.py::test_rev_opt_map PASSED [ 97%] 296s nipype/utils/tests/test_docparse.py::test_build_doc PASSED [ 97%] 296s nipype/utils/tests/test_docparse.py::test_insert_doc PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_split_filename[foo.nii-split0] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_split_filename[foo.nii.gz-split1] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_split_filename[foo.niml.dset-split2] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_split_filename[/usr/local/foo.nii.gz-split3] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_split_filename[../usr/local/foo.nii-split4] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_split_filename[/usr/local/foo.a.b.c.d-split5] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_split_filename[/usr/local/-split6] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_fname_presuffix PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_fnames_presuffix PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_hash_rename[foobar.nii-foobar_0xabc123.nii] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_hash_rename[foobar.nii.gz-foobar_0xabc123.nii.gz] PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_check_forhash PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_copyfile PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_copyfile_true PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_copyfiles PASSED [ 97%] 296s nipype/utils/tests/test_filemanip.py::test_linkchain PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_recopy PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_copyfallback SKIPPED (Fus...) [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_get_related_files PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_get_related_files_noninclusive PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_ensure_list[foo.nii-expected0] PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_ensure_list[filename1-expected1] PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_ensure_list[filename2-expected2] PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_ensure_list[12.34-None] PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_simplify_list[list0-foo.nii] PASSED [ 98%] 296s nipype/utils/tests/test_filemanip.py::test_simplify_list[list1-expected1] PASSED [ 98%] 298s nipype/utils/tests/test_filemanip.py::test_check_depends PASSED [ 98%] 298s nipype/utils/tests/test_filemanip.py::test_json PASSED [ 98%] 298s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.img-3-expected_files0] PASSED [ 98%] 298s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.hdr-3-expected_files1] PASSED [ 98%] 298s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.BRIK-2-expected_files2] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.HEAD-2-expected_files3] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_related_files[/path/foo.nii-2-expected_files4] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[sysfs on /sys type sysfs (rw,nosuid,nodev,noexec,relatime)\nproc on /proc type proc (rw,nosuid,nodev,noexec,relatime)\nudev on /dev type devtmpfs (rw,nosuid,relatime,size=8121732k,nr_inodes=2030433,mode=755)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=000)\ntmpfs on /run type tmpfs (rw,nosuid,noexec,relatime,size=1628440k,mode=755)\n/dev/nvme0n1p2 on / type ext4 (rw,relatime,errors=remount-ro,data=ordered)\nsecurityfs on /sys/kernel/security type securityfs (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev/shm type tmpfs (rw,nosuid,nodev)\ntmpfs on /sys/fs/cgroup type tmpfs (ro,nosuid,nodev,noexec,mode=755)\ncgroup on /sys/fs/cgroup/systemd type cgroup (rw,nosuid,nodev,noexec,relatime,xattr,release_agent=/lib/systemd/systemd-cgroups-agent,name=systemd)\npstore on /sys/fs/pstore type pstore (rw,nosuid,nodev,noexec,relatime)\nefivarfs on /sys/firmware/efi/efivars type efivarfs (rw,nosuid,nodev,noexec,relatime)\ncgroup on /sys/fs/cgroup/cpu,cpuacct type cgroup (rw,nosuid,nodev,noexec,relatime,cpu,cpuacct)\ncgroup on /sys/fs/cgroup/freezer type cgroup (rw,nosuid,nodev,noexec,relatime,freezer)\ncgroup on /sys/fs/cgroup/pids type cgroup (rw,nosuid,nodev,noexec,relatime,pids)\ncgroup on /sys/fs/cgroup/cpuset type cgroup (rw,nosuid,nodev,noexec,relatime,cpuset)\nsystemd-1 on /proc/sys/fs/binfmt_misc type autofs (rw,relatime,fd=26,pgrp=1,timeout=0,minproto=5,maxproto=5,direct)\nhugetlbfs on /dev/hugepages type hugetlbfs (rw,relatime)\ndebugfs on /sys/kernel/debug type debugfs (rw,relatime)\nmqueue on /dev/mqueue type mqueue (rw,relatime)\nfusectl on /sys/fs/fuse/connections type fusectl (rw,relatime)\n/dev/nvme0n1p1 on /boot/efi type vfat (rw,relatime,fmask=0077,dmask=0077,codepage=437,iocharset=iso8859-1,shortname=mixed,errors=remount-ro)\n/dev/nvme0n1p2 on /var/lib/docker/aufs type ext4 (rw,relatime,errors=remount-ro,data=ordered)\ngvfsd-fuse on /run/user/1002/gvfs type fuse.gvfsd-fuse (rw,nosuid,nodev,relatime,user_id=1002,group_id=1002)\n-0-expected0] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[/dev/disk2 on / (hfs, local, journaled)\ndevfs on /dev (devfs, local, nobrowse)\nmap -hosts on /net (autofs, nosuid, automounted, nobrowse)\nmap auto_home on /home (autofs, automounted, nobrowse)\nmap -fstab on /Network/Servers (autofs, automounted, nobrowse)\n/dev/disk3s2 on /Volumes/MyBookData (hfs, local, nodev, nosuid, journaled)\nafni:/elrond0 on /Volumes/afni (nfs)\nafni:/var/www/INCOMING on /Volumes/INCOMING (nfs)\nafni:/fraid on /Volumes/afni (nfs, asynchronous)\nboromir:/raid.bot on /Volumes/raid.bot (nfs)\nelros:/volume2/AFNI_SHARE on /Volumes/AFNI_SHARE (nfs)\nmap -static on /Volumes/safni (autofs, automounted, nobrowse)\nmap -static on /Volumes/raid.top (autofs, automounted, nobrowse)\n/dev/disk1s3 on /Volumes/Boot OS X (hfs, local, journaled, nobrowse)\n-0-expected1] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[-1-expected2] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[sysfs on /sys type sysfs (rw,nosuid,nodev,noexec,relatime)\nproc on /proc type proc (rw,nosuid,nodev,noexec,relatime)\nudev on /dev type devtmpfs (rw,nosuid,relatime,size=8121732k,nr_inodes=2030433,mode=755)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=000)\ntmpfs on /run type tmpfs (rw,nosuid,noexec,relatime,size=1628440k,mode=755)\n/dev/nvme0n1p2 on / type ext4 (rw,relatime,errors=remount-ro,data=ordered)\nsecurityfs on /sys/kernel/security type securityfs (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev/shm type tmpfs (rw,nosuid,nodev)\ntmpfs on /sys/fs/cgroup type tmpfs (ro,nosuid,nodev,noexec,mode=755)\ncgroup on /sys/fs/cgroup/systemd type cgroup (rw,nosuid,nodev,noexec,relatime,xattr,release_agent=/lib/systemd/systemd-cgroups-agent,name=systemd)\npstore on /sys/fs/pstore type pstore (rw,nosuid,nodev,noexec,relatime)\nefivarfs on /sys/firmware/efi/efivars type efivarfs (rw,nosuid,nodev,noexec,relatime)\ncgroup on /sys/fs/cgroup/cpu,cpuacct type cgroup (rw,nosuid,nodev,noexec,relatime,cpu,cpuacct)\ncgroup on /sys/fs/cgroup/freezer type cgroup (rw,nosuid,nodev,noexec,relatime,freezer)\ncgroup on /sys/fs/cgroup/pids type cgroup (rw,nosuid,nodev,noexec,relatime,pids)\ncgroup on /sys/fs/cgroup/cpuset type cgroup (rw,nosuid,nodev,noexec,relatime,cpuset)\nsystemd-1 on /proc/sys/fs/binfmt_misc type autofs (rw,relatime,fd=26,pgrp=1,timeout=0,minproto=5,maxproto=5,direct)\nhugetlbfs on /dev/hugepages type hugetlbfs (rw,relatime)\ndebugfs on /sys/kernel/debug type debugfs (rw,relatime)\nmqueue on /dev/mqueue type mqueue (rw,relatime)\nfusectl on /sys/fs/fuse/connections type fusectl (rw,relatime)\n/dev/nvme0n1p1 on /boot/efi type vfat (rw,relatime,fmask=0077,dmask=0077,codepage=437,iocharset=iso8859-1,shortname=mixed,errors=remount-ro)\n/dev/nvme0n1p2 on /var/lib/docker/aufs type ext4 (rw,relatime,errors=remount-ro,data=ordered)\ngvfsd-fuse on /run/user/1002/gvfs type fuse.gvfsd-fuse (rw,nosuid,nodev,relatime,user_id=1002,group_id=1002)\n-0-expected3] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[/dev/disk2 on / (hfs, local, journaled)\ndevfs on /dev (devfs, local, nobrowse)\nafni:/elrond0 on /Volumes/afni (cifs)\nafni:/var/www/INCOMING on /Volumes/INCOMING (nfs)\nafni:/fraid on /Volumes/afni/fraid (nfs, asynchronous)\nboromir:/raid.bot on /Volumes/raid.bot (nfs)\nelros:/volume2/AFNI_SHARE on /Volumes/AFNI_SHARE (nfs)\n-0-expected4] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[overlay on / type overlay (rw,relatime,lowerdir=/var/lib/docker/overlay2/l/26UTYITLF24YE7KEGTMHUNHPPG:/var/lib/docker/overlay2/l/SWGNP3T2EEB4CNBJFN3SDZLXHP,upperdir=/var/lib/docker/overlay2/a4c54ab1aa031bb5a14a424abd655510521e183ee4fa4158672e8376c89df394/diff,workdir=/var/lib/docker/overlay2/a4c54ab1aa031bb5a14a424abd655510521e183ee4fa4158672e8376c89df394/work)\nproc on /proc type proc (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev type tmpfs (rw,nosuid,size=65536k,mode=755)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\nsysfs on /sys type sysfs (ro,nosuid,nodev,noexec,relatime)\ntmpfs on /sys/fs/cgroup type tmpfs (ro,nosuid,nodev,noexec,relatime,mode=755)\ncpuset on /sys/fs/cgroup/cpuset type cgroup (ro,nosuid,nodev,noexec,relatime,cpuset)\ncpu on /sys/fs/cgroup/cpu type cgroup (ro,nosuid,nodev,noexec,relatime,cpu)\ncpuacct on /sys/fs/cgroup/cpuacct type cgroup (ro,nosuid,nodev,noexec,relatime,cpuacct)\nblkio on /sys/fs/cgroup/blkio type cgroup (ro,nosuid,nodev,noexec,relatime,blkio)\nmemory on /sys/fs/cgroup/memory type cgroup (ro,nosuid,nodev,noexec,relatime,memory)\ndevices on /sys/fs/cgroup/devices type cgroup (ro,nosuid,nodev,noexec,relatime,devices)\nfreezer on /sys/fs/cgroup/freezer type cgroup (ro,nosuid,nodev,noexec,relatime,freezer)\nnet_cls on /sys/fs/cgroup/net_cls type cgroup (ro,nosuid,nodev,noexec,relatime,net_cls)\nperf_event on /sys/fs/cgroup/perf_event type cgroup (ro,nosuid,nodev,noexec,relatime,perf_event)\nnet_prio on /sys/fs/cgroup/net_prio type cgroup (ro,nosuid,nodev,noexec,relatime,net_prio)\nhugetlb on /sys/fs/cgroup/hugetlb type cgroup (ro,nosuid,nodev,noexec,relatime,hugetlb)\npids on /sys/fs/cgroup/pids type cgroup (ro,nosuid,nodev,noexec,relatime,pids)\ncgroup on /sys/fs/cgroup/systemd type cgroup (ro,nosuid,nodev,noexec,relatime,name=systemd)\nmqueue on /dev/mqueue type mqueue (rw,nosuid,nodev,noexec,relatime)\n//10.0.75.1/C on /data type cifs (rw,relatime,vers=3.02,sec=ntlmsspi,cache=strict,username=filo,domain=MSI,uid=0,noforceuid,gid=0,noforcegid,addr=10.0.75.1,file_mode=0755,dir_mode=0755,iocharset=utf8,nounix,serverino,mapposix,nobrl,mfsymlinks,noperm,rsize=1048576,wsize=1048576,echo_interval=60,actimeo=1)\n/dev/sda1 on /etc/resolv.conf type ext4 (rw,relatime,data=ordered)\n/dev/sda1 on /etc/hostname type ext4 (rw,relatime,data=ordered)\n/dev/sda1 on /etc/hosts type ext4 (rw,relatime,data=ordered)\nshm on /dev/shm type tmpfs (rw,nosuid,nodev,noexec,relatime,size=65536k)\ndevpts on /dev/console type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\nproc on /proc/bus type proc (ro,relatime)\nproc on /proc/fs type proc (ro,relatime)\nproc on /proc/irq type proc (ro,relatime)\nproc on /proc/sys type proc (ro,relatime)\nproc on /proc/sysrq-trigger type proc (ro,relatime)\ntmpfs on /proc/kcore type tmpfs (rw,nosuid,size=65536k,mode=755)\ntmpfs on /proc/timer_list type tmpfs (rw,nosuid,size=65536k,mode=755)\ntmpfs on /proc/sched_debug type tmpfs (rw,nosuid,size=65536k,mode=755)\ntmpfs on /proc/scsi type tmpfs (ro,relatime)\ntmpfs on /sys/firmware type tmpfs (ro,relatime)\n-0-expected5] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[/proc on /proc type proc (rw,relatime)\nsysfs on /sys type sysfs (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev/shm type tmpfs (rw,relatime)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\n\ndevpts on /dev/ptmx type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\n\n-0-expected6] PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_cifs_check PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_indirectory PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_pklization PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_versioned_pklization PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_unversioned_pklization PASSED [ 98%] 299s nipype/utils/tests/test_filemanip.py::test_path_strict_resolve PASSED [ 99%] 299s nipype/utils/tests/test_filemanip.py::test_pickle[True] PASSED [ 99%] 299s nipype/utils/tests/test_filemanip.py::test_pickle[False] PASSED [ 99%] 299s nipype/utils/tests/test_filemanip.py::test_write_rst_list[- \n\n] PASSED [ 99%] 299s nipype/utils/tests/test_filemanip.py::test_write_rst_list[A string- A string\n\n] PASSED [ 99%] 299s nipype/utils/tests/test_filemanip.py::test_write_rst_list[items2- A list\n Of strings\n\n] PASSED [ 99%] 299s nipype/utils/tests/test_filemanip.py::test_write_rst_list[None-TypeError] PASSED [ 99%] 299s nipype/utils/tests/test_filemanip.py::test_emptydirs_dangling_nfs PASSED [ 99%] 299s nipype/utils/tests/test_functions.py::test_func_to_str PASSED [ 99%] 299s nipype/utils/tests/test_functions.py::test_func_to_str_err PASSED [ 99%] 299s nipype/utils/tests/test_functions.py::test_func_string PASSED [ 99%] 299s nipype/utils/tests/test_functions.py::test_func_print PASSED [ 99%] 299s nipype/utils/tests/test_imagemanip.py::test_copy_header[True] PASSED [ 99%] 299s nipype/utils/tests/test_imagemanip.py::test_copy_header[False] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_cont_to_str PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[yes-True] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[true-True] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[t-True] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[1-True] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[no-False] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[false-False] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[n-False] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[f-False] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_str2bool[0-False] PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_flatten PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_rgetcwd PASSED [ 99%] 299s nipype/utils/tests/test_misc.py::test_dict_diff PASSED [ 99%] 299s nipype/utils/tests/test_nipype2boutiques.py::test_generate PASSED [ 99%] 299s nipype/utils/tests/test_provenance.py::test_provenance PASSED [ 99%] 299s nipype/utils/tests/test_provenance.py::test_provenance_exists PASSED [ 99%] 299s nipype/utils/tests/test_provenance.py::test_safe_encode PASSED [100%] 299s 299s =============================== warnings summary =============================== 299s ../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258 299s /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258: DeprecationWarning: module 'sre_parse' is deprecated 299s import sre_parse 299s 299s ../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259 299s /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259: DeprecationWarning: module 'sre_constants' is deprecated 299s import sre_constants 299s 299s ../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1428 299s /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1428: PytestConfigWarning: Unknown config option: env 299s 299s self._warn_or_fail_if_strict(f"Unknown config option: {key}\n") 299s 299s ../../../usr/lib/python3/dist-packages/dipy/align/streamwarp.py:15 299s /usr/lib/python3/dist-packages/dipy/align/streamwarp.py:15: UserWarning: You do not have FURY installed. Some visualization functions might not work for you. Please install or upgrade FURY using pip install -U fury. For detailed installation instructions visit: https://fury.gl/ 299s from dipy.viz.plotting import bundle_shape_profile 299s 299s nipype/pipeline/engine/tests/test_nodes.py:319 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/engine/tests/test_nodes.py:319: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 299s @pytest.mark.timeout(30) 299s 299s nipype/pipeline/plugins/tests/test_oar.py:33 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/plugins/tests/test_oar.py:33: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 299s @pytest.mark.timeout(60) 299s 299s nipype/pipeline/plugins/tests/test_pbs.py:32 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/plugins/tests/test_pbs.py:32: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 299s @pytest.mark.timeout(60) 299s 299s nipype/utils/tests/test_provenance.py:16 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/utils/tests/test_provenance.py:16: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 299s @pytest.mark.timeout(60) 299s 299s nipype/utils/tests/test_provenance.py:29 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/utils/tests/test_provenance.py:29: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 299s @pytest.mark.timeout(60) 299s 299s nipype/workflows/__init__.py:27 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/workflows/__init__.py:27: UserWarning: Nipype 1 workflows have been moved to the niflow-nipype1-workflows package. pip install niflow-nipype1-workflows to continue using them. 299s warnings.warn(" ".join(_msg)) 299s 299s algorithms/tests/test_CompCor.py::TestCompCor::test_tcompcor_asymmetric_dim 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/algorithms/confounds.py:1453: RuntimeWarning: invalid value encountered in divide 299s variance_explained = (s**2) / np.sum(s**2) 299s 299s interfaces/ants/utils.py::nipype.interfaces.ants.utils.ImageMath 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/ants/utils.py:216: UserWarning: copy_header cannot be updated to True with PadImage as operation. 299s warn( 299s 299s interfaces/dipy/tests/test_base.py::test_get_default_args 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/dipy/tests/test_base.py:130: UserWarning: Pass ['new_name', 'since', 'until'] as keyword args. From version 2.0.0 passing these as positional arguments will result in an error. 299s @deprecated_params('x', None, '0.3', '0.5', alternative='test2.y') 299s 299s interfaces/dipy/tests/test_base.py::test_get_default_args 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/dipy/tests/test_base.py:134: UserWarning: Pass ['new_name', 'since'] as keyword args. From version 2.0.0 passing these as positional arguments will result in an error. 299s @deprecated_params(['dummy', 'x'], None, '0.3', alternative='test2.y') 299s 299s interfaces/dipy/tests/test_base.py::test_get_default_args 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/dipy/tests/test_base.py:138: UserWarning: Pass ['new_name', 'since', 'until'] as keyword args. From version 2.0.0 passing these as positional arguments will result in an error. 299s @deprecated_params(['dummy', 'x'], None, '0.3', '0.5', alternative='test2.y') 299s 299s interfaces/fsl/dti.py::nipype.interfaces.fsl.dti.ProbTrackX 299s interfaces/fsl/dti.py::nipype.interfaces.fsl.dti.ProbTrackX2 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/fsl/dti.py:812: DeprecationWarning: Deprecated: Please use create_bedpostx_pipeline instead 299s warnings.warn( 299s 299s interfaces/fsl/epi.py::nipype.interfaces.fsl.epi.EPIDeWarp 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/fsl/epi.py:1400: DeprecationWarning: Deprecated: Please use niflow.nipype1.workflows.dmri.preprocess.epi.sdc_fmb instead 299s warnings.warn( 299s 299s interfaces/fsl/epi.py::nipype.interfaces.fsl.epi.EddyCorrect 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/fsl/epi.py:1506: DeprecationWarning: Deprecated: Please use nipype.interfaces.fsl.epi.Eddy instead 299s warnings.warn( 299s 299s interfaces/nipy/utils.py::nipype.interfaces.nipy.utils.Similarity 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/nipy/utils.py:57: DeprecationWarning: This interface is deprecated since 0.10.0. Please use nipype.algorithms.metrics.Similarity 299s warnings.warn( 299s 299s pipeline/engine/tests/test_engine.py: 24 warnings 299s compilation 13:5: DeprecationWarning: nx.nx_pydot.write_dot depends on the pydot package, which has known issues and is not actively maintained. Consider using nx.nx_agraph.write_dot instead. 299s 299s See https://github.com/networkx/networkx/issues/5723 299s 299s pipeline/engine/tests/test_engine.py: 24 warnings 299s /usr/lib/python3/dist-packages/networkx/drawing/nx_pydot.py:51: DeprecationWarning: nx.nx_pydot.to_pydot depends on the pydot package, which has known issues and is not actively maintained. 299s 299s See https://github.com/networkx/networkx/issues/5723 299s P = to_pydot(G) 299s 299s pipeline/engine/tests/test_utils.py::test_provenance 299s pipeline/engine/tests/test_utils.py::test_provenance 299s pipeline/engine/tests/test_utils.py::test_provenance 299s utils/tests/test_provenance.py::test_provenance_exists 299s /usr/lib/python3/dist-packages/prov/serializers/provrdf.py:269: DeprecationWarning: ConjunctiveGraph is deprecated, use Dataset instead. 299s container = ConjunctiveGraph(identifier=identifier) 299s 299s pipeline/plugins/tests/test_callback.py::test_callback_exception[True-LegacyMultiProc] 299s pipeline/plugins/tests/test_callback.py::test_callback_exception[True-LegacyMultiProc] 299s /usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning: This process (pid=4188) is multi-threaded, use of fork() may lead to deadlocks in the child. 299s self.pid = os.fork() 299s 299s utils/tests/test_misc.py::test_rgetcwd 299s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/utils/misc.py:363: UserWarning: Current folder does not exist, replacing with "/tmp/pytest-of-ubuntu/pytest-0/test_rgetcwd0" instead. 299s warn('Current folder does not exist, replacing with "%s" instead.' % cwd) 299s 299s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 299s = 2741 passed, 267 skipped, 1 deselected, 5 xfailed, 75 warnings in 153.72s (0:02:33) = 300s Testing with python3.14 in /tmp/autopkgtest.IGlRUe/autopkgtest_tmp: 301s ============================= test session starts ============================== 301s platform linux -- Python 3.14.2, pytest-9.0.2, pluggy-1.6.0 -- /usr/bin/python3.14 301s cachedir: .pytest_cache 301s rootdir: /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype 301s configfile: pytest.ini 301s plugins: typeguard-4.4.4, xdist-3.8.0 311s collecting ... collected 3014 items / 1 deselected / 3013 selected 311s 311s nipype/algorithms/confounds.py::nipype.algorithms.confounds.CompCor PASSED [ 0%] 311s nipype/algorithms/confounds.py::nipype.algorithms.confounds.TCompCor PASSED [ 0%] 311s nipype/algorithms/confounds.py::nipype.algorithms.confounds.TSNR PASSED [ 0%] 311s nipype/algorithms/metrics.py::nipype.algorithms.metrics.ErrorMap PASSED [ 0%] 311s nipype/algorithms/metrics.py::nipype.algorithms.metrics.FuzzyOverlap PASSED [ 0%] 311s nipype/algorithms/metrics.py::nipype.algorithms.metrics.Overlap PASSED [ 0%] 311s nipype/algorithms/metrics.py::nipype.algorithms.metrics.Similarity PASSED [ 0%] 311s nipype/algorithms/misc.py::nipype.algorithms.misc.AddCSVColumn PASSED [ 0%] 311s nipype/algorithms/misc.py::nipype.algorithms.misc.AddCSVRow 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nipype/algorithms/tests/test_TSNR.py::TestTSNR::test_tsnr PASSED [ 1%] 311s nipype/algorithms/tests/test_TSNR.py::TestTSNR::test_tsnr_withpoly1 PASSED [ 1%] 311s nipype/algorithms/tests/test_TSNR.py::TestTSNR::test_tsnr_withpoly2 PASSED [ 1%] 311s nipype/algorithms/tests/test_TSNR.py::TestTSNR::test_tsnr_withpoly3 PASSED [ 1%] 311s nipype/algorithms/tests/test_TSNR.py::TestTSNR::test_warning PASSED [ 1%] 311s nipype/algorithms/tests/test_auto_ACompCor.py::test_ACompCor_inputs PASSED [ 1%] 311s nipype/algorithms/tests/test_auto_ACompCor.py::test_ACompCor_outputs PASSED [ 1%] 311s nipype/algorithms/tests/test_auto_ActivationCount.py::test_ActivationCount_inputs PASSED [ 1%] 311s nipype/algorithms/tests/test_auto_ActivationCount.py::test_ActivationCount_outputs PASSED [ 1%] 311s nipype/algorithms/tests/test_auto_AddCSVColumn.py::test_AddCSVColumn_inputs PASSED [ 1%] 311s nipype/algorithms/tests/test_auto_AddCSVColumn.py::test_AddCSVColumn_outputs PASSED [ 1%] 311s 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nipype/interfaces/fsl/tests/test_auto_Split.py::test_Split_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_StdImage.py::test_StdImage_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_StdImage.py::test_StdImage_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_SwapDimensions.py::test_SwapDimensions_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_SwapDimensions.py::test_SwapDimensions_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TOPUP.py::test_TOPUP_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TOPUP.py::test_TOPUP_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TemporalFilter.py::test_TemporalFilter_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TemporalFilter.py::test_TemporalFilter_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_Text2Vest.py::test_Text2Vest_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_Text2Vest.py::test_Text2Vest_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_Threshold.py::test_Threshold_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_Threshold.py::test_Threshold_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TractSkeleton.py::test_TractSkeleton_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TractSkeleton.py::test_TractSkeleton_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_Training.py::test_Training_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_Training.py::test_Training_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TrainingSetCreator.py::test_TrainingSetCreator_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_TrainingSetCreator.py::test_TrainingSetCreator_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_UnaryMaths.py::test_UnaryMaths_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_UnaryMaths.py::test_UnaryMaths_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_VecReg.py::test_VecReg_inputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_VecReg.py::test_VecReg_outputs PASSED [ 47%] 319s nipype/interfaces/fsl/tests/test_auto_Vest2Text.py::test_Vest2Text_inputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_Vest2Text.py::test_Vest2Text_outputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpPoints.py::test_WarpPoints_inputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpPoints.py::test_WarpPoints_outputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpPointsFromStd.py::test_WarpPointsFromStd_inputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpPointsFromStd.py::test_WarpPointsFromStd_outputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpPointsToStd.py::test_WarpPointsToStd_inputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpPointsToStd.py::test_WarpPointsToStd_outputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpUtils.py::test_WarpUtils_inputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_WarpUtils.py::test_WarpUtils_outputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_XFibres5.py::test_XFibres5_inputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_auto_XFibres5.py::test_XFibres5_outputs PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_fslversion SKIPPED (f...) [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_fsloutputtype SKIPPED [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_outputtype_to_ext PASSED [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_FSLCommand SKIPPED (f...) [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_FSLCommand2 SKIPPED (...) [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args0-desired_name0] SKIPPED [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args1-desired_name1] SKIPPED [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args2-desired_name2] SKIPPED [ 48%] 319s nipype/interfaces/fsl/tests/test_base.py::test_gen_fname[args3-desired_name3] SKIPPED [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_dtifit2 SKIPPED (fsl i...) [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_randomise2 XFAIL (Thes...) [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_Randomise_parallel XFAIL [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_Proj_thresh XFAIL (The...) [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_Vec_reg XFAIL (These t...) [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_Find_the_biggest XFAIL [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_tbss_skeleton SKIPPED [ 48%] 319s nipype/interfaces/fsl/tests/test_dti.py::test_distancemap SKIPPED (f...) [ 48%] 319s nipype/interfaces/fsl/tests/test_epi.py::test_eddy_correct2 SKIPPED [ 48%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[None] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[GIFTI] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI_GZ] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI_PAIR] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_maths_base[NIFTI_PAIR_GZ] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[None] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[GIFTI] SKIPPED [ 49%] 319s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI_PAIR] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_changedt[NIFTI_PAIR_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[None] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[GIFTI] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI_PAIR] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_threshold[NIFTI_PAIR_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[None] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[GIFTI] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI_PAIR] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_meanimage[NIFTI_PAIR_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[None] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[GIFTI] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI_PAIR] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_stdimage[NIFTI_PAIR_GZ] SKIPPED [ 49%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[None] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[GIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI_PAIR] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_maximage[NIFTI_PAIR_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[None] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[GIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI_PAIR] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_smooth[NIFTI_PAIR_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_mask[None] SKIPPED (...) [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_mask[GIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI_PAIR] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_mask[NIFTI_PAIR_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[None] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[GIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI_PAIR] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_dilation[NIFTI_PAIR_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[None] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[GIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI_PAIR] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_erosion[NIFTI_PAIR_GZ] SKIPPED [ 50%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[None] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[GIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI_PAIR] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_spatial_filter[NIFTI_PAIR_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[None] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[GIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI_PAIR] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_unarymaths[NIFTI_PAIR_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[None] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[GIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI_PAIR] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_binarymaths[NIFTI_PAIR_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[None] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[GIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI_PAIR] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_multimaths[NIFTI_PAIR_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[None] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[GIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI_PAIR] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_maths.py::test_tempfilt[NIFTI_PAIR_GZ] SKIPPED [ 51%] 320s nipype/interfaces/fsl/tests/test_model.py::test_MultipleRegressDesign SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_bet SKIPPED (fs...) [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_fast SKIPPED (f...) [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_fast_list_outputs SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_flirt SKIPPED (...) [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_mcflirt SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_mcflirt_opt SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_mcflirt_noinput SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_fnirt SKIPPED (...) [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_applywarp SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_fugue[attr0-fmap_out_file] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_fugue[attr1-shift_out_file] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_fugue[attr2-unwarped_file] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_preprocess.py::test_first_genfname SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[None] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[GIFTI] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI_GZ] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI_PAIR] SKIPPED [ 52%] 320s nipype/interfaces/fsl/tests/test_utils.py::test_fslroi[NIFTI_PAIR_GZ] SKIPPED [ 52%] 320s 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nipype/pipeline/engine/tests/test_utils.py::test_format_node PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_init PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_connect PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_add_nodes PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_disconnect PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_workflow_add PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_doubleconnect PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_nested_workflow_doubleconnect PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_duplicate_node_check PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[Linear-False-True] PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[Linear-False-False] PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[Linear-True-True] PASSED [ 94%] 340s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[Linear-True-False] PASSED [ 94%] 356s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[MultiProc-False-True] PASSED [ 94%] 372s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[MultiProc-False-False] PASSED [ 94%] 388s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[MultiProc-True-True] PASSED [ 94%] 404s nipype/pipeline/engine/tests/test_workflows.py::test_outputs_removal_wf[MultiProc-True-False] PASSED [ 94%] 404s nipype/pipeline/engine/tests/test_workflows.py::test_config_setting PASSED [ 94%] 404s nipype/pipeline/engine/utils.py::nipype.pipeline.engine.utils.merge_dict PASSED [ 94%] 404s nipype/pipeline/engine/utils.py::nipype.pipeline.engine.utils.synchronize_iterables PASSED [ 94%] 404s nipype/pipeline/engine/utils.py::nipype.pipeline.engine.utils.walk PASSED [ 94%] 404s nipype/pipeline/plugins/sge.py::nipype.pipeline.plugins.sge.qsub_sanitize_job_name PASSED [ 94%] 404s nipype/pipeline/plugins/tests/test_base.py::test_scipy_sparse PASSED [ 94%] 404s nipype/pipeline/plugins/tests/test_callback.py::test_callback_normal[Linear] PASSED [ 94%] 408s nipype/pipeline/plugins/tests/test_callback.py::test_callback_normal[MultiProc] PASSED [ 95%] 413s nipype/pipeline/plugins/tests/test_callback.py::test_callback_normal[LegacyMultiProc] PASSED [ 95%] 413s nipype/pipeline/plugins/tests/test_callback.py::test_callback_exception[False-Linear] PASSED [ 95%] 418s nipype/pipeline/plugins/tests/test_callback.py::test_callback_exception[False-MultiProc] PASSED [ 95%] 422s nipype/pipeline/plugins/tests/test_callback.py::test_callback_exception[False-LegacyMultiProc] PASSED [ 95%] 423s nipype/pipeline/plugins/tests/test_callback.py::test_callback_exception[True-Linear] PASSED [ 95%] 425s nipype/pipeline/plugins/tests/test_callback.py::test_callback_exception[True-MultiProc] PASSED [ 95%] 428s nipype/pipeline/plugins/tests/test_callback.py::test_callback_exception[True-LegacyMultiProc] PASSED [ 95%] 428s nipype/pipeline/plugins/tests/test_callback.py::test_callback_gantt[Linear] PASSED [ 95%] 432s nipype/pipeline/plugins/tests/test_callback.py::test_callback_gantt[MultiProc] PASSED [ 95%] 438s nipype/pipeline/plugins/tests/test_callback.py::test_callback_gantt[LegacyMultiProc] PASSED [ 95%] 438s nipype/pipeline/plugins/tests/test_debug.py::test_debug PASSED [ 95%] 438s nipype/pipeline/plugins/tests/test_legacymultiproc_nondaemon.py::test_run_multiproc_nondaemon_false SKIPPED [ 95%] 438s nipype/pipeline/plugins/tests/test_legacymultiproc_nondaemon.py::test_run_multiproc_nondaemon_true SKIPPED [ 95%] 438s nipype/pipeline/plugins/tests/test_linear.py::test_run_in_series PASSED [ 95%] 438s nipype/pipeline/plugins/tests/test_multiproc.py::test_run_multiproc SKIPPED [ 95%] 438s nipype/pipeline/plugins/tests/test_multiproc.py::test_no_more_memory_than_specified PASSED [ 95%] 438s nipype/pipeline/plugins/tests/test_multiproc.py::test_no_more_threads_than_specified PASSED [ 95%] 438s nipype/pipeline/plugins/tests/test_multiproc.py::test_no_more_gpu_threads_than_specified PASSED [ 95%] 438s nipype/pipeline/plugins/tests/test_multiproc.py::test_hold_job_until_procs_available SKIPPED [ 95%] 438s nipype/pipeline/plugins/tests/test_oar.py::test_run_oargraph SKIPPED [ 95%] 438s nipype/pipeline/plugins/tests/test_pbs.py::test_run_pbsgraph SKIPPED [ 95%] 442s nipype/pipeline/plugins/tests/test_sgelike.py::test_crashfile_creation PASSED [ 95%] 442s nipype/pipeline/plugins/tests/test_somaflow.py::test_run_somaflow SKIPPED [ 95%] 442s nipype/pipeline/plugins/tests/test_tools.py::test_report_crash PASSED [ 95%] 442s nipype/testing/tests/test_utils.py::test_tempfatfs SKIPPED (Cannot m...) [ 95%] 442s nipype/testing/tests/test_utils.py::test_tempfatfs_calledprocesserror PASSED [ 95%] 442s nipype/testing/tests/test_utils.py::test_tempfatfs_oserror PASSED [ 95%] 442s nipype/tests/test_nipype.py::test_nipype_info PASSED [ 95%] 442s nipype/tests/test_nipype.py::test_git_hash SKIPPED (not able to get ...) [ 95%] 442s nipype/tests/test_nipype.py::test_no_et_bare PASSED [ 96%] 444s nipype/tests/test_nipype.py::test_no_et_multiproc[True-MultiProc] PASSED [ 96%] 446s nipype/tests/test_nipype.py::test_no_et_multiproc[True-LegacyMultiProc] PASSED [ 96%] 450s nipype/tests/test_nipype.py::test_no_et_multiproc[False-MultiProc] PASSED [ 96%] 454s nipype/tests/test_nipype.py::test_no_et_multiproc[False-LegacyMultiProc] PASSED [ 96%] 454s nipype/tests/test_sample.py::test_basic PASSED [ 96%] 454s nipype/utils/docparse.py::nipype.utils.docparse.insert_doc PASSED [ 96%] 454s nipype/utils/filemanip.py::nipype.utils.filemanip.fname_presuffix PASSED [ 96%] 454s nipype/utils/filemanip.py::nipype.utils.filemanip.hash_infile PASSED [ 96%] 454s nipype/utils/filemanip.py::nipype.utils.filemanip.read_stream PASSED [ 96%] 454s nipype/utils/filemanip.py::nipype.utils.filemanip.split_filename PASSED [ 96%] 454s nipype/utils/matlabtools.py::nipype.utils.matlabtools.mlab_tempfile PASSED [ 96%] 454s nipype/utils/misc.py::nipype.utils.misc.str2bool PASSED [ 96%] 454s nipype/utils/onetime.py::nipype.utils.onetime.setattr_on_read PASSED [ 96%] 454s nipype/utils/tests/test_cmd.py::TestNipypeCMD::test_main_returns_2_on_empty PASSED [ 96%] 454s nipype/utils/tests/test_cmd.py::TestNipypeCMD::test_main_returns_0_on_help PASSED [ 96%] 454s nipype/utils/tests/test_cmd.py::TestNipypeCMD::test_list_nipy_interfacesp PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_parse[:12] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_parse[localhost:12] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_parse[localhost:12.1] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_config[0] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_config[1] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_config[2] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_config[3] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_config[4] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_system[0] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_system[1] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_system[2] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_system[3] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_system[4] PASSED [ 96%] 454s nipype/utils/tests/test_config.py::test_display_config_and_system PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_patched PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_empty_patched PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_patched_oldxvfbwrapper PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_empty_patched_oldxvfbwrapper PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_notinstalled PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_empty_notinstalled PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_noconfig_nosystem_installed SKIPPED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_empty_installed SKIPPED [ 97%] 454s nipype/utils/tests/test_config.py::test_display_empty_macosx PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_cwd_cached PASSED [ 97%] 454s nipype/utils/tests/test_config.py::test_debug_mode PASSED [ 97%] 454s nipype/utils/tests/test_docparse.py::test_rev_opt_map PASSED [ 97%] 454s nipype/utils/tests/test_docparse.py::test_build_doc PASSED [ 97%] 454s nipype/utils/tests/test_docparse.py::test_insert_doc PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_split_filename[foo.nii-split0] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_split_filename[foo.nii.gz-split1] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_split_filename[foo.niml.dset-split2] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_split_filename[/usr/local/foo.nii.gz-split3] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_split_filename[../usr/local/foo.nii-split4] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_split_filename[/usr/local/foo.a.b.c.d-split5] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_split_filename[/usr/local/-split6] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_fname_presuffix PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_fnames_presuffix PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_hash_rename[foobar.nii-foobar_0xabc123.nii] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_hash_rename[foobar.nii.gz-foobar_0xabc123.nii.gz] PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_check_forhash PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_copyfile PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_copyfile_true PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_copyfiles PASSED [ 97%] 454s nipype/utils/tests/test_filemanip.py::test_linkchain PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_recopy PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_copyfallback SKIPPED (Fus...) [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_get_related_files PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_get_related_files_noninclusive PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_ensure_list[foo.nii-expected0] PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_ensure_list[filename1-expected1] PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_ensure_list[filename2-expected2] PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_ensure_list[12.34-None] PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_simplify_list[list0-foo.nii] PASSED [ 98%] 454s nipype/utils/tests/test_filemanip.py::test_simplify_list[list1-expected1] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_check_depends PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_json PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.img-3-expected_files0] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.hdr-3-expected_files1] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.BRIK-2-expected_files2] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_related_files[/path/test.HEAD-2-expected_files3] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_related_files[/path/foo.nii-2-expected_files4] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[sysfs on /sys type sysfs (rw,nosuid,nodev,noexec,relatime)\nproc on /proc type proc (rw,nosuid,nodev,noexec,relatime)\nudev on /dev type devtmpfs (rw,nosuid,relatime,size=8121732k,nr_inodes=2030433,mode=755)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=000)\ntmpfs on /run type tmpfs (rw,nosuid,noexec,relatime,size=1628440k,mode=755)\n/dev/nvme0n1p2 on / type ext4 (rw,relatime,errors=remount-ro,data=ordered)\nsecurityfs on /sys/kernel/security type securityfs (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev/shm type tmpfs (rw,nosuid,nodev)\ntmpfs on /sys/fs/cgroup type tmpfs (ro,nosuid,nodev,noexec,mode=755)\ncgroup on /sys/fs/cgroup/systemd type cgroup (rw,nosuid,nodev,noexec,relatime,xattr,release_agent=/lib/systemd/systemd-cgroups-agent,name=systemd)\npstore on /sys/fs/pstore type pstore (rw,nosuid,nodev,noexec,relatime)\nefivarfs on /sys/firmware/efi/efivars type efivarfs (rw,nosuid,nodev,noexec,relatime)\ncgroup on /sys/fs/cgroup/cpu,cpuacct type cgroup (rw,nosuid,nodev,noexec,relatime,cpu,cpuacct)\ncgroup on /sys/fs/cgroup/freezer type cgroup (rw,nosuid,nodev,noexec,relatime,freezer)\ncgroup on /sys/fs/cgroup/pids type cgroup (rw,nosuid,nodev,noexec,relatime,pids)\ncgroup on /sys/fs/cgroup/cpuset type cgroup (rw,nosuid,nodev,noexec,relatime,cpuset)\nsystemd-1 on /proc/sys/fs/binfmt_misc type autofs (rw,relatime,fd=26,pgrp=1,timeout=0,minproto=5,maxproto=5,direct)\nhugetlbfs on /dev/hugepages type hugetlbfs (rw,relatime)\ndebugfs on /sys/kernel/debug type debugfs (rw,relatime)\nmqueue on /dev/mqueue type mqueue (rw,relatime)\nfusectl on /sys/fs/fuse/connections type fusectl (rw,relatime)\n/dev/nvme0n1p1 on /boot/efi type vfat (rw,relatime,fmask=0077,dmask=0077,codepage=437,iocharset=iso8859-1,shortname=mixed,errors=remount-ro)\n/dev/nvme0n1p2 on /var/lib/docker/aufs type ext4 (rw,relatime,errors=remount-ro,data=ordered)\ngvfsd-fuse on /run/user/1002/gvfs type fuse.gvfsd-fuse (rw,nosuid,nodev,relatime,user_id=1002,group_id=1002)\n-0-expected0] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[/dev/disk2 on / (hfs, local, journaled)\ndevfs on /dev (devfs, local, nobrowse)\nmap -hosts on /net (autofs, nosuid, automounted, nobrowse)\nmap auto_home on /home (autofs, automounted, nobrowse)\nmap -fstab on /Network/Servers (autofs, automounted, nobrowse)\n/dev/disk3s2 on /Volumes/MyBookData (hfs, local, nodev, nosuid, journaled)\nafni:/elrond0 on /Volumes/afni (nfs)\nafni:/var/www/INCOMING on /Volumes/INCOMING (nfs)\nafni:/fraid on /Volumes/afni (nfs, asynchronous)\nboromir:/raid.bot on /Volumes/raid.bot (nfs)\nelros:/volume2/AFNI_SHARE on /Volumes/AFNI_SHARE (nfs)\nmap -static on /Volumes/safni (autofs, automounted, nobrowse)\nmap -static on /Volumes/raid.top (autofs, automounted, nobrowse)\n/dev/disk1s3 on /Volumes/Boot OS X (hfs, local, journaled, nobrowse)\n-0-expected1] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[-1-expected2] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[sysfs on /sys type sysfs (rw,nosuid,nodev,noexec,relatime)\nproc on /proc type proc (rw,nosuid,nodev,noexec,relatime)\nudev on /dev type devtmpfs (rw,nosuid,relatime,size=8121732k,nr_inodes=2030433,mode=755)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=000)\ntmpfs on /run type tmpfs (rw,nosuid,noexec,relatime,size=1628440k,mode=755)\n/dev/nvme0n1p2 on / type ext4 (rw,relatime,errors=remount-ro,data=ordered)\nsecurityfs on /sys/kernel/security type securityfs (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev/shm type tmpfs (rw,nosuid,nodev)\ntmpfs on /sys/fs/cgroup type tmpfs (ro,nosuid,nodev,noexec,mode=755)\ncgroup on /sys/fs/cgroup/systemd type cgroup (rw,nosuid,nodev,noexec,relatime,xattr,release_agent=/lib/systemd/systemd-cgroups-agent,name=systemd)\npstore on /sys/fs/pstore type pstore (rw,nosuid,nodev,noexec,relatime)\nefivarfs on /sys/firmware/efi/efivars type efivarfs (rw,nosuid,nodev,noexec,relatime)\ncgroup on /sys/fs/cgroup/cpu,cpuacct type cgroup (rw,nosuid,nodev,noexec,relatime,cpu,cpuacct)\ncgroup on /sys/fs/cgroup/freezer type cgroup (rw,nosuid,nodev,noexec,relatime,freezer)\ncgroup on /sys/fs/cgroup/pids type cgroup (rw,nosuid,nodev,noexec,relatime,pids)\ncgroup on /sys/fs/cgroup/cpuset type cgroup (rw,nosuid,nodev,noexec,relatime,cpuset)\nsystemd-1 on /proc/sys/fs/binfmt_misc type autofs (rw,relatime,fd=26,pgrp=1,timeout=0,minproto=5,maxproto=5,direct)\nhugetlbfs on /dev/hugepages type hugetlbfs (rw,relatime)\ndebugfs on /sys/kernel/debug type debugfs (rw,relatime)\nmqueue on /dev/mqueue type mqueue (rw,relatime)\nfusectl on /sys/fs/fuse/connections type fusectl (rw,relatime)\n/dev/nvme0n1p1 on /boot/efi type vfat (rw,relatime,fmask=0077,dmask=0077,codepage=437,iocharset=iso8859-1,shortname=mixed,errors=remount-ro)\n/dev/nvme0n1p2 on /var/lib/docker/aufs type ext4 (rw,relatime,errors=remount-ro,data=ordered)\ngvfsd-fuse on /run/user/1002/gvfs type fuse.gvfsd-fuse (rw,nosuid,nodev,relatime,user_id=1002,group_id=1002)\n-0-expected3] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[/dev/disk2 on / (hfs, local, journaled)\ndevfs on /dev (devfs, local, nobrowse)\nafni:/elrond0 on /Volumes/afni (cifs)\nafni:/var/www/INCOMING on /Volumes/INCOMING (nfs)\nafni:/fraid on /Volumes/afni/fraid (nfs, asynchronous)\nboromir:/raid.bot on /Volumes/raid.bot (nfs)\nelros:/volume2/AFNI_SHARE on /Volumes/AFNI_SHARE (nfs)\n-0-expected4] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[overlay on / type overlay (rw,relatime,lowerdir=/var/lib/docker/overlay2/l/26UTYITLF24YE7KEGTMHUNHPPG:/var/lib/docker/overlay2/l/SWGNP3T2EEB4CNBJFN3SDZLXHP,upperdir=/var/lib/docker/overlay2/a4c54ab1aa031bb5a14a424abd655510521e183ee4fa4158672e8376c89df394/diff,workdir=/var/lib/docker/overlay2/a4c54ab1aa031bb5a14a424abd655510521e183ee4fa4158672e8376c89df394/work)\nproc on /proc type proc (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev type tmpfs (rw,nosuid,size=65536k,mode=755)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\nsysfs on /sys type sysfs (ro,nosuid,nodev,noexec,relatime)\ntmpfs on /sys/fs/cgroup type tmpfs (ro,nosuid,nodev,noexec,relatime,mode=755)\ncpuset on /sys/fs/cgroup/cpuset type cgroup (ro,nosuid,nodev,noexec,relatime,cpuset)\ncpu on /sys/fs/cgroup/cpu type cgroup (ro,nosuid,nodev,noexec,relatime,cpu)\ncpuacct on /sys/fs/cgroup/cpuacct type cgroup (ro,nosuid,nodev,noexec,relatime,cpuacct)\nblkio on /sys/fs/cgroup/blkio type cgroup (ro,nosuid,nodev,noexec,relatime,blkio)\nmemory on /sys/fs/cgroup/memory type cgroup (ro,nosuid,nodev,noexec,relatime,memory)\ndevices on /sys/fs/cgroup/devices type cgroup (ro,nosuid,nodev,noexec,relatime,devices)\nfreezer on /sys/fs/cgroup/freezer type cgroup (ro,nosuid,nodev,noexec,relatime,freezer)\nnet_cls on /sys/fs/cgroup/net_cls type cgroup (ro,nosuid,nodev,noexec,relatime,net_cls)\nperf_event on /sys/fs/cgroup/perf_event type cgroup (ro,nosuid,nodev,noexec,relatime,perf_event)\nnet_prio on /sys/fs/cgroup/net_prio type cgroup (ro,nosuid,nodev,noexec,relatime,net_prio)\nhugetlb on /sys/fs/cgroup/hugetlb type cgroup (ro,nosuid,nodev,noexec,relatime,hugetlb)\npids on /sys/fs/cgroup/pids type cgroup (ro,nosuid,nodev,noexec,relatime,pids)\ncgroup on /sys/fs/cgroup/systemd type cgroup (ro,nosuid,nodev,noexec,relatime,name=systemd)\nmqueue on /dev/mqueue type mqueue (rw,nosuid,nodev,noexec,relatime)\n//10.0.75.1/C on /data type cifs (rw,relatime,vers=3.02,sec=ntlmsspi,cache=strict,username=filo,domain=MSI,uid=0,noforceuid,gid=0,noforcegid,addr=10.0.75.1,file_mode=0755,dir_mode=0755,iocharset=utf8,nounix,serverino,mapposix,nobrl,mfsymlinks,noperm,rsize=1048576,wsize=1048576,echo_interval=60,actimeo=1)\n/dev/sda1 on /etc/resolv.conf type ext4 (rw,relatime,data=ordered)\n/dev/sda1 on /etc/hostname type ext4 (rw,relatime,data=ordered)\n/dev/sda1 on /etc/hosts type ext4 (rw,relatime,data=ordered)\nshm on /dev/shm type tmpfs (rw,nosuid,nodev,noexec,relatime,size=65536k)\ndevpts on /dev/console type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\nproc on /proc/bus type proc (ro,relatime)\nproc on /proc/fs type proc (ro,relatime)\nproc on /proc/irq type proc (ro,relatime)\nproc on /proc/sys type proc (ro,relatime)\nproc on /proc/sysrq-trigger type proc (ro,relatime)\ntmpfs on /proc/kcore type tmpfs (rw,nosuid,size=65536k,mode=755)\ntmpfs on /proc/timer_list type tmpfs (rw,nosuid,size=65536k,mode=755)\ntmpfs on /proc/sched_debug type tmpfs (rw,nosuid,size=65536k,mode=755)\ntmpfs on /proc/scsi type tmpfs (ro,relatime)\ntmpfs on /sys/firmware type tmpfs (ro,relatime)\n-0-expected5] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_parse_mount_table[/proc on /proc type proc (rw,relatime)\nsysfs on /sys type sysfs (rw,nosuid,nodev,noexec,relatime)\ntmpfs on /dev/shm type tmpfs (rw,relatime)\ndevpts on /dev/pts type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\n\ndevpts on /dev/ptmx type devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=666)\n\n-0-expected6] PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_cifs_check PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_indirectory PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_pklization PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_versioned_pklization PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_unversioned_pklization PASSED [ 98%] 456s nipype/utils/tests/test_filemanip.py::test_path_strict_resolve PASSED [ 99%] 456s nipype/utils/tests/test_filemanip.py::test_pickle[True] PASSED [ 99%] 456s nipype/utils/tests/test_filemanip.py::test_pickle[False] PASSED [ 99%] 456s nipype/utils/tests/test_filemanip.py::test_write_rst_list[- \n\n] PASSED [ 99%] 456s nipype/utils/tests/test_filemanip.py::test_write_rst_list[A string- A string\n\n] PASSED [ 99%] 456s nipype/utils/tests/test_filemanip.py::test_write_rst_list[items2- A list\n Of strings\n\n] PASSED [ 99%] 456s nipype/utils/tests/test_filemanip.py::test_write_rst_list[None-TypeError] PASSED [ 99%] 456s nipype/utils/tests/test_filemanip.py::test_emptydirs_dangling_nfs PASSED [ 99%] 456s nipype/utils/tests/test_functions.py::test_func_to_str PASSED [ 99%] 456s nipype/utils/tests/test_functions.py::test_func_to_str_err PASSED [ 99%] 456s nipype/utils/tests/test_functions.py::test_func_string PASSED [ 99%] 456s nipype/utils/tests/test_functions.py::test_func_print PASSED [ 99%] 456s nipype/utils/tests/test_imagemanip.py::test_copy_header[True] PASSED [ 99%] 456s nipype/utils/tests/test_imagemanip.py::test_copy_header[False] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_cont_to_str PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[yes-True] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[true-True] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[t-True] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[1-True] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[no-False] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[false-False] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[n-False] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[f-False] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_str2bool[0-False] PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_flatten PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_rgetcwd PASSED [ 99%] 456s nipype/utils/tests/test_misc.py::test_dict_diff PASSED [ 99%] 456s nipype/utils/tests/test_nipype2boutiques.py::test_generate PASSED [ 99%] 456s nipype/utils/tests/test_provenance.py::test_provenance SKIPPED (Test...) [ 99%] 456s nipype/utils/tests/test_provenance.py::test_provenance_exists SKIPPED [ 99%] 457s nipype/utils/tests/test_provenance.py::test_safe_encode PASSED [100%] 457s 457s =================================== FAILURES =================================== 457s _______________________________ test_provenance ________________________________ 457s 457s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-1/test_provenance0') 457s 457s def test_provenance(tmpdir): 457s metawf = pe.Workflow(name="meta") 457s metawf.base_dir = tmpdir.strpath 457s metawf.add_nodes([create_wf("wf%d" % i) for i in range(1)]) 457s eg = metawf.run(plugin="Linear") 457s prov_base = tmpdir.join("workflow_provenance_test").strpath 457s > psg = write_workflow_prov(eg, prov_base, format="all") 457s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 457s 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/engine/tests/test_utils.py:161: 457s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/engine/utils.py:1609: in write_workflow_prov 457s ps.write_provenance(filename, format=format) 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/utils/provenance.py:455: in write_provenance 457s self.g.serialize(filename + ext, format="rdf", rdf_format=rdf_format) 457s /usr/lib/python3/dist-packages/prov/model.py:2727: in serialize 457s serializer = serializers.get(format)(self) 457s ^^^^^^^^^^^^^^^^^^^^^^^ 457s /usr/lib/python3/dist-packages/prov/serializers/__init__.py:83: in get 457s Registry.load_serializers() 457s /usr/lib/python3/dist-packages/prov/serializers/__init__.py:67: in load_serializers 457s from prov.serializers.provrdf import ProvRDFSerializer 457s /usr/lib/python3/dist-packages/prov/serializers/provrdf.py:15: in 457s from rdflib.graph import ConjunctiveGraph # type: ignore[import-not-found] 457s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 457s /usr/lib/python3/dist-packages/rdflib/__init__.py:168: in 457s from rdflib.graph import ConjunctiveGraph, Dataset, Graph 457s /usr/lib/python3/dist-packages/rdflib/graph.py:292: in 457s from rdflib.resource import Resource 457s /usr/lib/python3/dist-packages/rdflib/resource.py:296: in 457s class Resource: 457s /usr/lib/python3/dist-packages/rdflib/resource.py:379: in Resource 457s def value(self, p=RDF.value, o=None, default=None, any=True): 457s ^^^^^^^^^ 457s /usr/lib/python3/dist-packages/rdflib/namespace/__init__.py:285: in __getattr__ 457s return cls.__getitem__(name) 457s ^^^^^^^^^^^^^^^^^^^^^ 457s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 457s 457s cls = Namespace(Namespace('http://www.w3.org/1999/02/22-rdf-syntax-ns#')) 457s name = 'value', default = None 457s 457s @lru_cache(maxsize=None) 457s def __getitem__(cls, name: str, default=None) -> URIRef: 457s name = str(name) 457s 457s if name in _DFNS_RESERVED_ATTRS: 457s raise KeyError( 457s f"DefinedNamespace like object has no access item named {name!r}" 457s ) 457s elif name in _IGNORED_ATTR_LOOKUP: 457s raise KeyError() 457s if (cls._warn or cls._fail) and name not in cls: 457s if cls._fail: 457s > raise AttributeError(f"term '{name}' not in namespace '{cls._NS}'") 457s E AttributeError: term 'value' not in namespace 'http://www.w3.org/1999/02/22-rdf-syntax-ns#' 457s 457s /usr/lib/python3/dist-packages/rdflib/namespace/__init__.py:268: AttributeError 457s ----------------------------- Captured stdout call ----------------------------- 457s 260122-19:11:55,218 nipype.workflow INFO: 457s Workflow meta settings: ['check', 'execution', 'logging', 'monitoring'] 457s 260122-19:11:55,220 nipype.workflow INFO: 457s Running serially. 457s 260122-19:11:55,220 nipype.workflow INFO: 457s [Node] Setting-up "meta.wf0.proc" in "/tmp/pytest-of-ubuntu/pytest-1/test_provenance0/meta/wf0/_fwhm_0/proc". 457s 260122-19:11:55,221 nipype.workflow INFO: 457s [Node] Executing "proc" 457s 260122-19:11:55,222 nipype.workflow INFO: 457s [Node] Finished "proc", elapsed time 0.000238s. 457s 260122-19:11:55,223 nipype.workflow INFO: 457s [Node] Setting-up "meta.wf0.proc2" in "/tmp/pytest-of-ubuntu/pytest-1/test_provenance0/meta/wf0/_fwhm_0/_fwhm_0/proc2". 457s 260122-19:11:55,224 nipype.workflow INFO: 457s [Node] Executing "proc2" 457s 260122-19:11:55,225 nipype.workflow INFO: 457s [Node] Finished "proc2", elapsed time 0.000214s. 457s ------------------------------ Captured log call ------------------------------- 457s INFO nipype.workflow:workflows.py:613 Workflow meta settings: ['check', 'execution', 'logging', 'monitoring'] 457s INFO nipype.workflow:linear.py:31 Running serially. 457s INFO nipype.workflow:nodes.py:451 [Node] Setting-up "meta.wf0.proc" in "/tmp/pytest-of-ubuntu/pytest-1/test_provenance0/meta/wf0/_fwhm_0/proc". 457s INFO nipype.workflow:nodes.py:714 [Node] Executing "proc" 457s INFO nipype.workflow:nodes.py:721 [Node] Finished "proc", elapsed time 0.000238s. 457s INFO nipype.workflow:nodes.py:451 [Node] Setting-up "meta.wf0.proc2" in "/tmp/pytest-of-ubuntu/pytest-1/test_provenance0/meta/wf0/_fwhm_0/_fwhm_0/proc2". 457s INFO nipype.workflow:nodes.py:714 [Node] Executing "proc2" 457s INFO nipype.workflow:nodes.py:721 [Node] Finished "proc2", elapsed time 0.000214s. 457s =============================== warnings summary =============================== 457s ../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258 457s /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258: DeprecationWarning: module 'sre_parse' is deprecated 457s import sre_parse 457s 457s ../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259 457s /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259: DeprecationWarning: module 'sre_constants' is deprecated 457s import sre_constants 457s 457s ../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1428 457s /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1428: PytestConfigWarning: Unknown config option: env 457s 457s self._warn_or_fail_if_strict(f"Unknown config option: {key}\n") 457s 457s ../../../usr/lib/python3/dist-packages/dipy/align/streamwarp.py:15 457s /usr/lib/python3/dist-packages/dipy/align/streamwarp.py:15: UserWarning: You do not have FURY installed. Some visualization functions might not work for you. Please install or upgrade FURY using pip install -U fury. For detailed installation instructions visit: https://fury.gl/ 457s from dipy.viz.plotting import bundle_shape_profile 457s 457s nipype/pipeline/engine/tests/test_nodes.py:319 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/engine/tests/test_nodes.py:319: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 457s @pytest.mark.timeout(30) 457s 457s nipype/pipeline/plugins/tests/test_oar.py:33 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/plugins/tests/test_oar.py:33: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 457s @pytest.mark.timeout(60) 457s 457s nipype/pipeline/plugins/tests/test_pbs.py:32 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/pipeline/plugins/tests/test_pbs.py:32: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 457s @pytest.mark.timeout(60) 457s 457s nipype/utils/tests/test_provenance.py:16 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/utils/tests/test_provenance.py:16: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 457s @pytest.mark.timeout(60) 457s 457s nipype/utils/tests/test_provenance.py:29 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/utils/tests/test_provenance.py:29: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 457s @pytest.mark.timeout(60) 457s 457s nipype/workflows/__init__.py:27 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/workflows/__init__.py:27: UserWarning: Nipype 1 workflows have been moved to the niflow-nipype1-workflows package. pip install niflow-nipype1-workflows to continue using them. 457s warnings.warn(" ".join(_msg)) 457s 457s algorithms/tests/test_CompCor.py::TestCompCor::test_tcompcor_asymmetric_dim 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/algorithms/confounds.py:1453: RuntimeWarning: invalid value encountered in divide 457s variance_explained = (s**2) / np.sum(s**2) 457s 457s interfaces/ants/utils.py::nipype.interfaces.ants.utils.ImageMath 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/ants/utils.py:216: UserWarning: copy_header cannot be updated to True with PadImage as operation. 457s warn( 457s 457s interfaces/dipy/tests/test_base.py::test_get_default_args 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/dipy/tests/test_base.py:130: UserWarning: Pass ['new_name', 'since', 'until'] as keyword args. From version 2.0.0 passing these as positional arguments will result in an error. 457s @deprecated_params('x', None, '0.3', '0.5', alternative='test2.y') 457s 457s interfaces/dipy/tests/test_base.py::test_get_default_args 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/dipy/tests/test_base.py:134: UserWarning: Pass ['new_name', 'since'] as keyword args. From version 2.0.0 passing these as positional arguments will result in an error. 457s @deprecated_params(['dummy', 'x'], None, '0.3', alternative='test2.y') 457s 457s interfaces/dipy/tests/test_base.py::test_get_default_args 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/dipy/tests/test_base.py:138: UserWarning: Pass ['new_name', 'since', 'until'] as keyword args. From version 2.0.0 passing these as positional arguments will result in an error. 457s @deprecated_params(['dummy', 'x'], None, '0.3', '0.5', alternative='test2.y') 457s 457s interfaces/fsl/dti.py::nipype.interfaces.fsl.dti.ProbTrackX 457s interfaces/fsl/dti.py::nipype.interfaces.fsl.dti.ProbTrackX2 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/fsl/dti.py:812: DeprecationWarning: Deprecated: Please use create_bedpostx_pipeline instead 457s warnings.warn( 457s 457s interfaces/fsl/epi.py::nipype.interfaces.fsl.epi.EPIDeWarp 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/fsl/epi.py:1400: DeprecationWarning: Deprecated: Please use niflow.nipype1.workflows.dmri.preprocess.epi.sdc_fmb instead 457s warnings.warn( 457s 457s interfaces/fsl/epi.py::nipype.interfaces.fsl.epi.EddyCorrect 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/fsl/epi.py:1506: DeprecationWarning: Deprecated: Please use nipype.interfaces.fsl.epi.Eddy instead 457s warnings.warn( 457s 457s interfaces/nipy/utils.py::nipype.interfaces.nipy.utils.Similarity 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/interfaces/nipy/utils.py:57: DeprecationWarning: This interface is deprecated since 0.10.0. Please use nipype.algorithms.metrics.Similarity 457s warnings.warn( 457s 457s pipeline/engine/tests/test_engine.py: 24 warnings 457s compilation 13:5: DeprecationWarning: nx.nx_pydot.write_dot depends on the pydot package, which has known issues and is not actively maintained. Consider using nx.nx_agraph.write_dot instead. 457s 457s See https://github.com/networkx/networkx/issues/5723 457s 457s pipeline/engine/tests/test_engine.py: 24 warnings 457s /usr/lib/python3/dist-packages/networkx/drawing/nx_pydot.py:51: DeprecationWarning: nx.nx_pydot.to_pydot depends on the pydot package, which has known issues and is not actively maintained. 457s 457s See https://github.com/networkx/networkx/issues/5723 457s P = to_pydot(G) 457s 457s utils/tests/test_misc.py::test_rgetcwd 457s /tmp/autopkgtest.IGlRUe/autopkgtest_tmp/nipype/utils/misc.py:363: UserWarning: Current folder does not exist, replacing with "/tmp/pytest-of-ubuntu/pytest-1/test_rgetcwd0" instead. 457s warn('Current folder does not exist, replacing with "%s" instead.' % cwd) 457s 457s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 457s =========================== short test summary info ============================ 457s FAILED nipype/pipeline/engine/tests/test_utils.py::test_provenance - Attribut... 457s = 1 failed, 2738 passed, 269 skipped, 1 deselected, 5 xfailed, 69 warnings in 155.27s (0:02:35) = 458s autopkgtest [19:13:53]: test run-unit-test: -----------------------] 459s run-unit-test FAIL non-zero exit status 1 459s autopkgtest [19:13:54]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 459s autopkgtest [19:13:54]: @@@@@@@@@@@@@@@@@@@@ summary 459s run-unit-test FAIL non-zero exit status 1