0s autopkgtest [06:44:23]: starting date and time: 2026-02-05 06:44:23+0000 0s autopkgtest [06:44:23]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [06:44:23]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8gy4zylg/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade libssw --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.42-2ubuntu5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-ppc64el-9.secgroup --name adt-resolute-ppc64el-libssw-20260205-064423-juju-7f2275-prod-proposed-migration-environment-20-1a27e042-74fd-4be9-b816-42184976ff24 --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-ppc64el-libssw-20260205-064423-juju-7f2275-prod-proposed-migration-environment-20-1a27e042-74fd-4be9-b816-42184976ff24 from image adt/ubuntu-resolute-ppc64el-server-20260205.img (UUID f866c950-0b62-4023-bac6-0f13279e15ed)... 60s autopkgtest [06:45:23]: testbed dpkg architecture: ppc64el 60s autopkgtest [06:45:23]: testbed apt version: 3.1.14 60s autopkgtest [06:45:23]: @@@@@@@@@@@@@@@@@@@@ test bed setup 61s autopkgtest [06:45:23]: testbed release detected to be: None 61s autopkgtest [06:45:24]: updating testbed package index (apt update) 61s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 61s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 61s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 61s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 62s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5260 B] 62s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [228 kB] 62s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [35.4 kB] 62s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1719 kB] 62s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [261 kB] 62s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1514 kB] 63s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [21.9 kB] 63s Fetched 3910 kB in 1s (2708 kB/s) 64s Reading package lists... 64s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 64s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 64s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 64s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 65s Reading package lists... 65s Reading package lists... 65s Building dependency tree... 65s Reading state information... 66s Calculating upgrade... 66s The following packages will be upgraded: 66s libc-bin libc-gconv-modules-extra libc6 locales pollinate 66s python3-referencing sed 66s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 66s Need to get 8612 kB of archives. 66s After this operation, 0 B of additional disk space will be used. 66s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el sed ppc64el 4.9-2build3 [211 kB] 66s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-gconv-modules-extra ppc64el 2.42-2ubuntu5 [1448 kB] 67s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc6 ppc64el 2.42-2ubuntu5 [1913 kB] 69s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-bin ppc64el 2.42-2ubuntu5 [748 kB] 70s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el locales all 2.42-2ubuntu5 [4255 kB] 74s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el pollinate all 4.33-4ubuntu5 [14.0 kB] 74s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 74s dpkg-preconfigure: unable to re-open stdin: No such file or directory 74s Fetched 8612 kB in 8s (1051 kB/s) 74s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 74s Preparing to unpack .../sed_4.9-2build3_ppc64el.deb ... 74s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 75s Setting up sed (4.9-2build3) ... 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 75s Preparing to unpack .../libc-gconv-modules-extra_2.42-2ubuntu5_ppc64el.deb ... 75s Unpacking libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 75s Setting up libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) ... 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 75s Preparing to unpack .../libc6_2.42-2ubuntu5_ppc64el.deb ... 75s Unpacking libc6:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 76s Setting up libc6:ppc64el (2.42-2ubuntu5) ... 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 76s Preparing to unpack .../libc-bin_2.42-2ubuntu5_ppc64el.deb ... 76s Unpacking libc-bin (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 76s Setting up libc-bin (2.42-2ubuntu5) ... 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 76s Preparing to unpack .../locales_2.42-2ubuntu5_all.deb ... 76s Unpacking locales (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 77s Preparing to unpack .../pollinate_4.33-4ubuntu5_all.deb ... 77s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ... 77s Preparing to unpack .../python3-referencing_0.36.2-1ubuntu2_all.deb ... 77s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ... 77s Setting up locales (2.42-2ubuntu5) ... 78s Generating locales (this might take a while)... 79s en_US.UTF-8... done 79s Generation complete. 79s Setting up pollinate (4.33-4ubuntu5) ... 90s Setting up python3-referencing (0.36.2-1ubuntu2) ... 90s Processing triggers for man-db (2.13.1-1) ... 91s Processing triggers for install-info (7.2-5) ... 91s Processing triggers for systemd (259-1ubuntu3) ... 92s autopkgtest [06:45:55]: upgrading testbed (apt dist-upgrade and autopurge) 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Calculating upgrade... 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Solving dependencies... 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s autopkgtest [06:45:57]: rebooting testbed after setup commands that affected boot 132s autopkgtest [06:46:35]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:45:54 UTC 2026 135s autopkgtest [06:46:38]: @@@@@@@@@@@@@@@@@@@@ apt-source libssw 138s Get:1 http://ftpmaster.internal/ubuntu resolute/universe libssw 1.1-15 (dsc) [2509 B] 138s Get:2 http://ftpmaster.internal/ubuntu resolute/universe libssw 1.1-15 (tar) [12.3 MB] 138s Get:3 http://ftpmaster.internal/ubuntu resolute/universe libssw 1.1-15 (diff) [54.3 kB] 139s gpgv: Signature made Tue Jul 23 18:45:44 2024 UTC 139s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 139s gpgv: issuer "emollier@debian.org" 139s gpgv: Can't check signature: No public key 139s dpkg-source: warning: cannot verify inline signature for ./libssw_1.1-15.dsc: no acceptable signature found 139s autopkgtest [06:46:42]: testing package libssw version 1.1-15 142s autopkgtest [06:46:45]: build not needed 145s autopkgtest [06:46:48]: test build-lib: preparing testbed 145s Reading package lists... 145s Building dependency tree... 145s Reading state information... 145s Solving dependencies... 145s The following NEW packages will be installed: 145s build-essential cpp cpp-15 cpp-15-powerpc64le-linux-gnu 145s cpp-powerpc64le-linux-gnu g++ g++-15 g++-15-powerpc64le-linux-gnu 145s g++-powerpc64le-linux-gnu gcc gcc-15 gcc-15-powerpc64le-linux-gnu 145s gcc-powerpc64le-linux-gnu libasan8 libc-dev-bin libc6-dev libcc1-0 145s libcrypt-dev libgcc-15-dev libgomp1 libisl23 libitm1 liblsan0 libmpc3 145s libquadmath0 libssw-dev libssw0 libstdc++-15-dev libtsan2 libubsan1 145s linux-libc-dev rpcsvc-proto zlib1g-dev 146s 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. 146s Need to get 66.6 MB of archives. 146s After this operation, 243 MB of additional disk space will be used. 146s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-dev-bin ppc64el 2.42-2ubuntu5 [23.9 kB] 146s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el linux-libc-dev ppc64el 6.18.0-9.9 [1847 kB] 146s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcrypt-dev ppc64el 1:4.5.1-1 [162 kB] 146s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el rpcsvc-proto ppc64el 1.4.3-1build1 [84.2 kB] 146s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc6-dev ppc64el 2.42-2ubuntu5 [2079 kB] 146s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libisl23 ppc64el 0.27-1build1 [893 kB] 146s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmpc3 ppc64el 1.3.1-2 [62.5 kB] 146s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [11.4 MB] 146s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15 ppc64el 15.2.0-12ubuntu1 [1038 B] 146s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [5746 B] 146s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp ppc64el 4:15.2.0-4ubuntu1 [22.4 kB] 146s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcc1-0 ppc64el 15.2.0-12ubuntu1 [49.0 kB] 146s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-12ubuntu1 [169 kB] 146s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el libitm1 ppc64el 15.2.0-12ubuntu1 [32.2 kB] 146s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el libasan8 ppc64el 15.2.0-12ubuntu1 [3006 kB] 147s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblsan0 ppc64el 15.2.0-12ubuntu1 [1374 kB] 147s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtsan2 ppc64el 15.2.0-12ubuntu1 [2729 kB] 147s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el libubsan1 ppc64el 15.2.0-12ubuntu1 [1231 kB] 147s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el libquadmath0 ppc64el 15.2.0-12ubuntu1 [160 kB] 147s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgcc-15-dev ppc64el 15.2.0-12ubuntu1 [1670 kB] 147s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [22.4 MB] 148s Get:22 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15 ppc64el 15.2.0-12ubuntu1 [530 kB] 148s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1220 B] 148s Get:24 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc ppc64el 4:15.2.0-4ubuntu1 [5032 B] 148s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el libstdc++-15-dev ppc64el 15.2.0-12ubuntu1 [2747 kB] 148s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15-powerpc64le-linux-gnu ppc64el 15.2.0-12ubuntu1 [13.0 MB] 148s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15 ppc64el 15.2.0-12ubuntu1 [25.3 kB] 148s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [970 B] 148s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++ ppc64el 4:15.2.0-4ubuntu1 [1092 B] 148s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el build-essential ppc64el 12.12ubuntu2 [5256 B] 148s Get:31 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libssw0 ppc64el 1.1-15 [24.2 kB] 148s Get:32 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libssw-dev ppc64el 1.1-15 [26.2 kB] 148s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [903 kB] 149s Fetched 66.6 MB in 3s (22.2 MB/s) 149s Selecting previously unselected package libc-dev-bin. 149s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 149s Preparing to unpack .../00-libc-dev-bin_2.42-2ubuntu5_ppc64el.deb ... 149s Unpacking libc-dev-bin (2.42-2ubuntu5) ... 149s Selecting previously unselected package linux-libc-dev:ppc64el. 149s Preparing to unpack .../01-linux-libc-dev_6.18.0-9.9_ppc64el.deb ... 149s Unpacking linux-libc-dev:ppc64el (6.18.0-9.9) ... 150s Selecting previously unselected package libcrypt-dev:ppc64el. 150s Preparing to unpack .../02-libcrypt-dev_1%3a4.5.1-1_ppc64el.deb ... 150s Unpacking libcrypt-dev:ppc64el (1:4.5.1-1) ... 150s Selecting previously unselected package rpcsvc-proto. 150s Preparing to unpack .../03-rpcsvc-proto_1.4.3-1build1_ppc64el.deb ... 150s Unpacking rpcsvc-proto (1.4.3-1build1) ... 150s Selecting previously unselected package libc6-dev:ppc64el. 150s Preparing to unpack .../04-libc6-dev_2.42-2ubuntu5_ppc64el.deb ... 150s Unpacking libc6-dev:ppc64el (2.42-2ubuntu5) ... 150s Selecting previously unselected package libisl23:ppc64el. 150s Preparing to unpack .../05-libisl23_0.27-1build1_ppc64el.deb ... 150s Unpacking libisl23:ppc64el (0.27-1build1) ... 150s Selecting previously unselected package libmpc3:ppc64el. 150s Preparing to unpack .../06-libmpc3_1.3.1-2_ppc64el.deb ... 150s Unpacking libmpc3:ppc64el (1.3.1-2) ... 150s Selecting previously unselected package cpp-15-powerpc64le-linux-gnu. 150s Preparing to unpack .../07-cpp-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package cpp-15. 150s Preparing to unpack .../08-cpp-15_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 150s Preparing to unpack .../09-cpp-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 150s Unpacking cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 150s Selecting previously unselected package cpp. 150s Preparing to unpack .../10-cpp_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 150s Unpacking cpp (4:15.2.0-4ubuntu1) ... 150s Selecting previously unselected package libcc1-0:ppc64el. 150s Preparing to unpack .../11-libcc1-0_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package libgomp1:ppc64el. 150s Preparing to unpack .../12-libgomp1_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libgomp1:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package libitm1:ppc64el. 150s Preparing to unpack .../13-libitm1_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libitm1:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package libasan8:ppc64el. 150s Preparing to unpack .../14-libasan8_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libasan8:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package liblsan0:ppc64el. 150s Preparing to unpack .../15-liblsan0_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking liblsan0:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package libtsan2:ppc64el. 150s Preparing to unpack .../16-libtsan2_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libtsan2:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package libubsan1:ppc64el. 150s Preparing to unpack .../17-libubsan1_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libubsan1:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package libquadmath0:ppc64el. 150s Preparing to unpack .../18-libquadmath0_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package libgcc-15-dev:ppc64el. 150s Preparing to unpack .../19-libgcc-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 150s Selecting previously unselected package gcc-15-powerpc64le-linux-gnu. 150s Preparing to unpack .../20-gcc-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 150s Unpacking gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 151s Selecting previously unselected package gcc-15. 151s Preparing to unpack .../21-gcc-15_15.2.0-12ubuntu1_ppc64el.deb ... 151s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 151s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 151s Preparing to unpack .../22-gcc-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 151s Unpacking gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 151s Selecting previously unselected package gcc. 151s Preparing to unpack .../23-gcc_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 151s Unpacking gcc (4:15.2.0-4ubuntu1) ... 151s Selecting previously unselected package libstdc++-15-dev:ppc64el. 151s Preparing to unpack .../24-libstdc++-15-dev_15.2.0-12ubuntu1_ppc64el.deb ... 151s Unpacking libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 151s Selecting previously unselected package g++-15-powerpc64le-linux-gnu. 151s Preparing to unpack .../25-g++-15-powerpc64le-linux-gnu_15.2.0-12ubuntu1_ppc64el.deb ... 151s Unpacking g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 151s Selecting previously unselected package g++-15. 151s Preparing to unpack .../26-g++-15_15.2.0-12ubuntu1_ppc64el.deb ... 151s Unpacking g++-15 (15.2.0-12ubuntu1) ... 151s Selecting previously unselected package g++-powerpc64le-linux-gnu. 151s Preparing to unpack .../27-g++-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 151s Unpacking g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 151s Selecting previously unselected package g++. 151s Preparing to unpack .../28-g++_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 151s Unpacking g++ (4:15.2.0-4ubuntu1) ... 151s Selecting previously unselected package build-essential. 151s Preparing to unpack .../29-build-essential_12.12ubuntu2_ppc64el.deb ... 151s Unpacking build-essential (12.12ubuntu2) ... 151s Selecting previously unselected package libssw0:ppc64el. 151s Preparing to unpack .../30-libssw0_1.1-15_ppc64el.deb ... 151s Unpacking libssw0:ppc64el (1.1-15) ... 151s Selecting previously unselected package libssw-dev:ppc64el. 151s Preparing to unpack .../31-libssw-dev_1.1-15_ppc64el.deb ... 151s Unpacking libssw-dev:ppc64el (1.1-15) ... 151s Selecting previously unselected package zlib1g-dev:ppc64el. 151s Preparing to unpack .../32-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_ppc64el.deb ... 151s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 151s Setting up linux-libc-dev:ppc64el (6.18.0-9.9) ... 151s Setting up libgomp1:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up rpcsvc-proto (1.4.3-1build1) ... 151s Setting up libquadmath0:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up libmpc3:ppc64el (1.3.1-2) ... 151s Setting up libubsan1:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up libcrypt-dev:ppc64el (1:4.5.1-1) ... 151s Setting up libasan8:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up libtsan2:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up libisl23:ppc64el (0.27-1build1) ... 151s Setting up libc-dev-bin (2.42-2ubuntu5) ... 151s Setting up libssw0:ppc64el (1.1-15) ... 151s Setting up libcc1-0:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up liblsan0:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up libitm1:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up libgcc-15-dev:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up libssw-dev:ppc64el (1.1-15) ... 151s Setting up cpp-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 151s Setting up cpp-15 (15.2.0-12ubuntu1) ... 151s Setting up libc6-dev:ppc64el (2.42-2ubuntu5) ... 151s Setting up cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 151s Setting up gcc-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 151s Setting up gcc-15 (15.2.0-12ubuntu1) ... 151s Setting up libstdc++-15-dev:ppc64el (15.2.0-12ubuntu1) ... 151s Setting up gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 151s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 151s Setting up cpp (4:15.2.0-4ubuntu1) ... 151s Setting up g++-15-powerpc64le-linux-gnu (15.2.0-12ubuntu1) ... 151s Setting up gcc (4:15.2.0-4ubuntu1) ... 151s Setting up g++-15 (15.2.0-12ubuntu1) ... 151s Setting up g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 151s Setting up g++ (4:15.2.0-4ubuntu1) ... 151s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 151s Setting up build-essential (12.12ubuntu2) ... 151s Processing triggers for man-db (2.13.1-1) ... 152s Processing triggers for libc-bin (2.42-2ubuntu5) ... 154s autopkgtest [06:46:57]: test build-lib: [----------------------- 154s optimal_alignment_score: 21 sub-optimal_alignment_score: 8 target_begin: 9 target_end: 22 query_begin: 1 query_end: 15 154s 154s Target: 9 CTGACCCGG-AAATC 22 154s ||||*||||*||||| 154s Query: 1 CTGAGCCGGTAAATC 15 154s 154s ===== SSW result ===== 154s Best Smith-Waterman score: 21 154s Next-best Smith-Waterman score: 8 154s Reference start: 8 154s Reference end: 21 154s Query start: 0 154s Query end: 14 154s Next-best reference end: 4 154s Number of mismatches: 2 154s Cigar: 4=1X4=1I5= 154s ====================== 155s autopkgtest [06:46:58]: test build-lib: -----------------------] 155s build-lib PASS 155s autopkgtest [06:46:58]: test build-lib: - - - - - - - - - - results - - - - - - - - - - 155s autopkgtest [06:46:58]: test build-lib-java: preparing testbed 169s Creating nova instance adt-resolute-ppc64el-libssw-20260205-064423-juju-7f2275-prod-proposed-migration-environment-20-1a27e042-74fd-4be9-b816-42184976ff24 from image adt/ubuntu-resolute-ppc64el-server-20260205.img (UUID f866c950-0b62-4023-bac6-0f13279e15ed)... 237s autopkgtest [06:48:20]: testbed dpkg architecture: ppc64el 238s autopkgtest [06:48:21]: testbed apt version: 3.1.14 238s autopkgtest [06:48:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup 243s autopkgtest [06:48:21]: testbed release detected to be: resolute 243s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 243s autopkgtest [06:48:23]: updating testbed package index (apt update) 243s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 243s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 243s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 243s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5260 B] 243s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1719 kB] 243s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [228 kB] 243s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [35.4 kB] 243s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [261 kB] 243s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1514 kB] 243s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [21.9 kB] 243s Fetched 3910 kB in 1s (2748 kB/s) 243s Reading package lists... 245s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 245s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 245s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 245s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 246s Reading package lists... 246s Reading package lists... 246s Building dependency tree... 246s Reading state information... 246s Calculating upgrade... 246s The following packages will be upgraded: 246s libc-bin libc-gconv-modules-extra libc6 locales pollinate 246s python3-referencing sed 246s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 246s Need to get 8612 kB of archives. 246s After this operation, 0 B of additional disk space will be used. 246s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el sed ppc64el 4.9-2build3 [211 kB] 246s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-gconv-modules-extra ppc64el 2.42-2ubuntu5 [1448 kB] 247s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc6 ppc64el 2.42-2ubuntu5 [1913 kB] 247s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-bin ppc64el 2.42-2ubuntu5 [748 kB] 247s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el locales all 2.42-2ubuntu5 [4255 kB] 247s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el pollinate all 4.33-4ubuntu5 [14.0 kB] 247s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 247s dpkg-preconfigure: unable to re-open stdin: No such file or directory 247s Fetched 8612 kB in 1s (10.6 MB/s) 248s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 248s Preparing to unpack .../sed_4.9-2build3_ppc64el.deb ... 248s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 248s Setting up sed (4.9-2build3) ... 248s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 248s Preparing to unpack .../libc-gconv-modules-extra_2.42-2ubuntu5_ppc64el.deb ... 248s Unpacking libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 248s Setting up libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) ... 248s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 248s Preparing to unpack .../libc6_2.42-2ubuntu5_ppc64el.deb ... 248s Unpacking libc6:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 248s Setting up libc6:ppc64el (2.42-2ubuntu5) ... 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 249s Preparing to unpack .../libc-bin_2.42-2ubuntu5_ppc64el.deb ... 249s Unpacking libc-bin (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 249s Setting up libc-bin (2.42-2ubuntu5) ... 249s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 249s Preparing to unpack .../locales_2.42-2ubuntu5_all.deb ... 249s Unpacking locales (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 249s Preparing to unpack .../pollinate_4.33-4ubuntu5_all.deb ... 249s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ... 249s Preparing to unpack .../python3-referencing_0.36.2-1ubuntu2_all.deb ... 249s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ... 250s Setting up locales (2.42-2ubuntu5) ... 251s Generating locales (this might take a while)... 252s en_US.UTF-8... done 252s Generation complete. 252s Setting up pollinate (4.33-4ubuntu5) ... 262s Setting up python3-referencing (0.36.2-1ubuntu2) ... 263s Processing triggers for man-db (2.13.1-1) ... 265s Processing triggers for install-info (7.2-5) ... 265s Processing triggers for systemd (259-1ubuntu3) ... 266s autopkgtest [06:48:49]: upgrading testbed (apt dist-upgrade and autopurge) 266s Reading package lists... 266s Building dependency tree... 266s Reading state information... 266s Calculating upgrade... 267s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 267s Reading package lists... 267s Building dependency tree... 267s Reading state information... 267s Solving dependencies... 267s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 268s autopkgtest [06:48:51]: rebooting testbed after setup commands that affected boot 312s Reading package lists... 312s Building dependency tree... 312s Reading state information... 312s Solving dependencies... 312s The following NEW packages will be installed: 312s ca-certificates-java default-jdk-headless default-jre-headless java-common 312s libjpeg-turbo8 libjpeg8 liblcms2-2 libpcsclite1 libssw-java 312s openjdk-21-jdk-headless openjdk-21-jre-headless 312s 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. 312s Need to get 129 MB of archives. 312s After this operation, 303 MB of additional disk space will be used. 312s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el ca-certificates-java all 20240118build1 [11.7 kB] 312s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el java-common all 0.76build1 [6956 B] 312s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblcms2-2 ppc64el 2.17-1 [246 kB] 312s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-4ubuntu2 [215 kB] 312s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 312s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libpcsclite1 ppc64el 2.4.1-1 [31.9 kB] 312s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el openjdk-21-jre-headless ppc64el 21.0.10+7-1 [45.9 MB] 313s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el default-jre-headless ppc64el 2:1.21-76build1 [3270 B] 313s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el openjdk-21-jdk-headless ppc64el 21.0.10+7-1 [82.4 MB] 314s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el default-jdk-headless ppc64el 2:1.21-76build1 [962 B] 314s Get:11 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libssw-java ppc64el 1.1-15 [20.4 kB] 315s Fetched 129 MB in 2s (53.4 MB/s) 315s Selecting previously unselected package ca-certificates-java. 315s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 315s Preparing to unpack .../00-ca-certificates-java_20240118build1_all.deb ... 315s Unpacking ca-certificates-java (20240118build1) ... 315s Selecting previously unselected package java-common. 315s Preparing to unpack .../01-java-common_0.76build1_all.deb ... 315s Unpacking java-common (0.76build1) ... 315s Selecting previously unselected package liblcms2-2:ppc64el. 315s Preparing to unpack .../02-liblcms2-2_2.17-1_ppc64el.deb ... 315s Unpacking liblcms2-2:ppc64el (2.17-1) ... 315s Selecting previously unselected package libjpeg-turbo8:ppc64el. 315s Preparing to unpack .../03-libjpeg-turbo8_2.1.5-4ubuntu2_ppc64el.deb ... 315s Unpacking libjpeg-turbo8:ppc64el (2.1.5-4ubuntu2) ... 315s Selecting previously unselected package libjpeg8:ppc64el. 315s Preparing to unpack .../04-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 315s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 315s Selecting previously unselected package libpcsclite1:ppc64el. 315s Preparing to unpack .../05-libpcsclite1_2.4.1-1_ppc64el.deb ... 315s Unpacking libpcsclite1:ppc64el (2.4.1-1) ... 315s Selecting previously unselected package openjdk-21-jre-headless:ppc64el. 315s Preparing to unpack .../06-openjdk-21-jre-headless_21.0.10+7-1_ppc64el.deb ... 315s Unpacking openjdk-21-jre-headless:ppc64el (21.0.10+7-1) ... 316s Selecting previously unselected package default-jre-headless. 316s Preparing to unpack .../07-default-jre-headless_2%3a1.21-76build1_ppc64el.deb ... 316s Unpacking default-jre-headless (2:1.21-76build1) ... 316s Selecting previously unselected package openjdk-21-jdk-headless:ppc64el. 316s Preparing to unpack .../08-openjdk-21-jdk-headless_21.0.10+7-1_ppc64el.deb ... 316s Unpacking openjdk-21-jdk-headless:ppc64el (21.0.10+7-1) ... 317s Selecting previously unselected package default-jdk-headless. 317s Preparing to unpack .../09-default-jdk-headless_2%3a1.21-76build1_ppc64el.deb ... 317s Unpacking default-jdk-headless (2:1.21-76build1) ... 317s Selecting previously unselected package libssw-java. 317s Preparing to unpack .../10-libssw-java_1.1-15_ppc64el.deb ... 317s Unpacking libssw-java (1.1-15) ... 317s Setting up liblcms2-2:ppc64el (2.17-1) ... 317s Setting up java-common (0.76build1) ... 317s Setting up libssw-java (1.1-15) ... 317s Setting up libpcsclite1:ppc64el (2.4.1-1) ... 317s Setting up libjpeg-turbo8:ppc64el (2.1.5-4ubuntu2) ... 317s Setting up ca-certificates-java (20240118build1) ... 317s No JRE found. Skipping Java certificates setup. 317s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 317s Setting up openjdk-21-jre-headless:ppc64el (21.0.10+7-1) ... 317s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/java to provide /usr/bin/java (java) in auto mode 317s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 317s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 317s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 317s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 317s Processing triggers for libc-bin (2.42-2ubuntu5) ... 317s Processing triggers for man-db (2.13.1-1) ... 318s Processing triggers for ca-certificates-java (20240118build1) ... 319s Adding debian:ACCVRAIZ1.pem 319s Adding debian:AC_RAIZ_FNMT-RCM.pem 319s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 319s Adding debian:ANF_Secure_Server_Root_CA.pem 319s Adding debian:Actalis_Authentication_Root_CA.pem 319s Adding debian:AffirmTrust_Commercial.pem 319s Adding debian:AffirmTrust_Networking.pem 319s Adding debian:AffirmTrust_Premium.pem 319s Adding debian:AffirmTrust_Premium_ECC.pem 319s Adding debian:Amazon_Root_CA_1.pem 319s Adding debian:Amazon_Root_CA_2.pem 319s Adding debian:Amazon_Root_CA_3.pem 319s Adding debian:Amazon_Root_CA_4.pem 319s Adding debian:Atos_TrustedRoot_2011.pem 319s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 319s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 319s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 319s Adding debian:BJCA_Global_Root_CA1.pem 319s Adding debian:BJCA_Global_Root_CA2.pem 319s Adding debian:Baltimore_CyberTrust_Root.pem 319s Adding debian:Buypass_Class_2_Root_CA.pem 319s Adding debian:Buypass_Class_3_Root_CA.pem 319s Adding debian:CA_Disig_Root_R2.pem 319s Adding debian:CFCA_EV_ROOT.pem 319s Adding debian:COMODO_Certification_Authority.pem 319s Adding debian:COMODO_ECC_Certification_Authority.pem 319s Adding debian:COMODO_RSA_Certification_Authority.pem 319s Adding debian:Certainly_Root_E1.pem 319s Adding debian:Certainly_Root_R1.pem 319s Adding debian:Certigna.pem 319s Adding debian:Certigna_Root_CA.pem 319s Adding debian:Certum_EC-384_CA.pem 319s Adding debian:Certum_Trusted_Network_CA.pem 319s Adding debian:Certum_Trusted_Network_CA_2.pem 319s Adding debian:Certum_Trusted_Root_CA.pem 319s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 319s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 319s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 319s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 319s Adding debian:Comodo_AAA_Services_root.pem 319s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 319s Adding debian:D-TRUST_BR_Root_CA_2_2023.pem 319s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 319s Adding debian:D-TRUST_EV_Root_CA_2_2023.pem 319s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 319s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 319s Adding debian:DigiCert_Assured_ID_Root_CA.pem 319s Adding debian:DigiCert_Assured_ID_Root_G2.pem 319s Adding debian:DigiCert_Assured_ID_Root_G3.pem 319s Adding debian:DigiCert_Global_Root_CA.pem 319s Adding debian:DigiCert_Global_Root_G2.pem 319s Adding debian:DigiCert_Global_Root_G3.pem 319s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 319s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 319s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 319s Adding debian:DigiCert_Trusted_Root_G4.pem 319s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 319s Adding debian:Entrust_Root_Certification_Authority.pem 319s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 319s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 319s Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem 319s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 319s Adding debian:GLOBALTRUST_2020.pem 319s Adding debian:GTS_Root_R1.pem 319s Adding debian:GTS_Root_R2.pem 319s Adding debian:GTS_Root_R3.pem 319s Adding debian:GTS_Root_R4.pem 319s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 319s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 319s Adding debian:GlobalSign_Root_CA.pem 319s Adding debian:GlobalSign_Root_CA_-_R3.pem 319s Adding debian:GlobalSign_Root_CA_-_R6.pem 319s Adding debian:GlobalSign_Root_E46.pem 319s Adding debian:GlobalSign_Root_R46.pem 319s Adding debian:Go_Daddy_Class_2_CA.pem 319s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 319s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 319s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 319s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 319s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 319s Adding debian:HiPKI_Root_CA_-_G1.pem 319s Adding debian:Hongkong_Post_Root_CA_3.pem 319s Adding debian:ISRG_Root_X1.pem 319s Adding debian:ISRG_Root_X2.pem 319s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 319s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 319s Adding debian:Izenpe.com.pem 319s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 319s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 319s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 319s Adding debian:NAVER_Global_Root_Certification_Authority.pem 319s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 319s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 319s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 319s Adding debian:QuoVadis_Root_CA_1_G3.pem 319s Adding debian:QuoVadis_Root_CA_2.pem 319s Adding debian:QuoVadis_Root_CA_2_G3.pem 319s Adding debian:QuoVadis_Root_CA_3.pem 319s Adding debian:QuoVadis_Root_CA_3_G3.pem 319s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 319s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 319s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 319s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 319s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 319s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 319s Adding debian:SZAFIR_ROOT_CA2.pem 319s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 319s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 319s Adding debian:SecureSign_Root_CA12.pem 319s Adding debian:SecureSign_Root_CA14.pem 319s Adding debian:SecureSign_Root_CA15.pem 319s Adding debian:SecureTrust_CA.pem 319s Adding debian:Secure_Global_CA.pem 319s Adding debian:Security_Communication_ECC_RootCA1.pem 319s Adding debian:Security_Communication_RootCA2.pem 319s Adding debian:Starfield_Class_2_CA.pem 319s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 319s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 319s Adding debian:SwissSign_Gold_CA_-_G2.pem 319s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 319s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 319s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 319s Adding debian:TWCA_CYBER_Root_CA.pem 319s Adding debian:TWCA_Global_Root_CA.pem 319s Adding debian:TWCA_Root_Certification_Authority.pem 319s Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem 319s Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem 319s Adding debian:TeliaSonera_Root_CA_v1.pem 319s Adding debian:Telia_Root_CA_v2.pem 319s Adding debian:TrustAsia_Global_Root_CA_G3.pem 319s Adding debian:TrustAsia_Global_Root_CA_G4.pem 319s Adding debian:Trustwave_Global_Certification_Authority.pem 319s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 319s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 319s Adding debian:TunTrust_Root_CA.pem 319s Adding debian:UCA_Extended_Validation_Root.pem 319s Adding debian:UCA_Global_G2_Root.pem 319s Adding debian:USERTrust_ECC_Certification_Authority.pem 319s Adding debian:USERTrust_RSA_Certification_Authority.pem 319s Adding debian:XRamp_Global_CA_Root.pem 319s Adding debian:certSIGN_ROOT_CA.pem 319s Adding debian:certSIGN_Root_CA_G2.pem 319s Adding debian:e-Szigno_Root_CA_2017.pem 319s Adding debian:ePKI_Root_Certification_Authority.pem 319s Adding debian:emSign_ECC_Root_CA_-_C3.pem 319s Adding debian:emSign_ECC_Root_CA_-_G3.pem 319s Adding debian:emSign_Root_CA_-_C1.pem 319s Adding debian:emSign_Root_CA_-_G1.pem 319s Adding debian:vTrus_ECC_Root_CA.pem 319s Adding debian:vTrus_Root_CA.pem 319s done. 319s Setting up openjdk-21-jdk-headless:ppc64el (21.0.10+7-1) ... 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jar to provide /usr/bin/jar (jar) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/javac to provide /usr/bin/javac (javac) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/javap to provide /usr/bin/javap (javap) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jps to provide /usr/bin/jps (jps) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode 319s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode 319s Setting up default-jre-headless (2:1.21-76build1) ... 319s Setting up default-jdk-headless (2:1.21-76build1) ... 323s autopkgtest [06:49:46]: test build-lib-java: [----------------------- 324s Aligning nucleotides 324s score1=21 score2=8 ref_begin1=8 ref_end1=21 read_begin1=0 read_end1=14 ref_end2=4 cigar=9M1I5M 324s autopkgtest [06:49:47]: test build-lib-java: -----------------------] 325s build-lib-java PASS 325s autopkgtest [06:49:48]: test build-lib-java: - - - - - - - - - - results - - - - - - - - - - 325s autopkgtest [06:49:48]: test run-example: preparing testbed 347s Creating nova instance adt-resolute-ppc64el-libssw-20260205-064423-juju-7f2275-prod-proposed-migration-environment-20-1a27e042-74fd-4be9-b816-42184976ff24 from image adt/ubuntu-resolute-ppc64el-server-20260205.img (UUID f866c950-0b62-4023-bac6-0f13279e15ed)... 399s autopkgtest [06:51:02]: testbed dpkg architecture: ppc64el 400s autopkgtest [06:51:03]: testbed apt version: 3.1.14 400s autopkgtest [06:51:03]: @@@@@@@@@@@@@@@@@@@@ test bed setup 400s autopkgtest [06:51:03]: testbed release detected to be: resolute 401s autopkgtest [06:51:04]: updating testbed package index (apt update) 401s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 401s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 401s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 401s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 401s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5260 B] 401s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1719 kB] 402s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [35.4 kB] 402s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [228 kB] 402s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [261 kB] 402s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [1514 kB] 403s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [21.9 kB] 403s Fetched 3910 kB in 2s (2035 kB/s) 404s Reading package lists... 404s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 404s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 404s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 404s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 405s Reading package lists... 405s Reading package lists... 405s Building dependency tree... 405s Reading state information... 406s Calculating upgrade... 406s The following packages will be upgraded: 406s libc-bin libc-gconv-modules-extra libc6 locales pollinate 406s python3-referencing sed 406s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 406s Need to get 8612 kB of archives. 406s After this operation, 0 B of additional disk space will be used. 406s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el sed ppc64el 4.9-2build3 [211 kB] 406s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-gconv-modules-extra ppc64el 2.42-2ubuntu5 [1448 kB] 406s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc6 ppc64el 2.42-2ubuntu5 [1913 kB] 406s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el libc-bin ppc64el 2.42-2ubuntu5 [748 kB] 406s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el locales all 2.42-2ubuntu5 [4255 kB] 406s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el pollinate all 4.33-4ubuntu5 [14.0 kB] 406s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 407s dpkg-preconfigure: unable to re-open stdin: No such file or directory 407s Fetched 8612 kB in 1s (13.2 MB/s) 407s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 407s Preparing to unpack .../sed_4.9-2build3_ppc64el.deb ... 407s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 407s Setting up sed (4.9-2build3) ... 407s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 407s Preparing to unpack .../libc-gconv-modules-extra_2.42-2ubuntu5_ppc64el.deb ... 408s Unpacking libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 408s Setting up libc-gconv-modules-extra:ppc64el (2.42-2ubuntu5) ... 408s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 408s Preparing to unpack .../libc6_2.42-2ubuntu5_ppc64el.deb ... 408s Unpacking libc6:ppc64el (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 408s Setting up libc6:ppc64el (2.42-2ubuntu5) ... 409s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 409s Preparing to unpack .../libc-bin_2.42-2ubuntu5_ppc64el.deb ... 409s Unpacking libc-bin (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 409s Setting up libc-bin (2.42-2ubuntu5) ... 409s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 409s Preparing to unpack .../locales_2.42-2ubuntu5_all.deb ... 409s Unpacking locales (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 409s Preparing to unpack .../pollinate_4.33-4ubuntu5_all.deb ... 409s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ... 410s Preparing to unpack .../python3-referencing_0.36.2-1ubuntu2_all.deb ... 410s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ... 410s Setting up locales (2.42-2ubuntu5) ... 411s Generating locales (this might take a while)... 412s en_US.UTF-8... done 412s Generation complete. 412s Setting up pollinate (4.33-4ubuntu5) ... 423s Setting up python3-referencing (0.36.2-1ubuntu2) ... 423s Processing triggers for man-db (2.13.1-1) ... 427s Processing triggers for install-info (7.2-5) ... 427s Processing triggers for systemd (259-1ubuntu3) ... 428s autopkgtest [06:51:31]: upgrading testbed (apt dist-upgrade and autopurge) 428s Reading package lists... 428s Building dependency tree... 428s Reading state information... 428s Calculating upgrade... 428s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 429s Reading package lists... 429s Building dependency tree... 429s Reading state information... 429s Solving dependencies... 429s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 429s autopkgtest [06:51:32]: rebooting testbed after setup commands that affected boot 471s Reading package lists... 471s Building dependency tree... 471s Reading state information... 471s Solving dependencies... 471s The following NEW packages will be installed: 471s libssw0 ssw-align 471s 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. 471s Need to get 48.2 kB of archives. 471s After this operation, 170 kB of additional disk space will be used. 471s Get:1 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libssw0 ppc64el 1.1-15 [24.2 kB] 471s Get:2 http://ftpmaster.internal/ubuntu resolute/universe ppc64el ssw-align ppc64el 1.1-15 [24.0 kB] 472s Fetched 48.2 kB in 0s (235 kB/s) 472s Selecting previously unselected package libssw0:ppc64el. 472s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82008 files and directories currently installed.) 472s Preparing to unpack .../libssw0_1.1-15_ppc64el.deb ... 472s Unpacking libssw0:ppc64el (1.1-15) ... 472s Selecting previously unselected package ssw-align. 472s Preparing to unpack .../ssw-align_1.1-15_ppc64el.deb ... 472s Unpacking ssw-align (1.1-15) ... 472s Setting up libssw0:ppc64el (1.1-15) ... 472s Setting up ssw-align (1.1-15) ... 472s Processing triggers for libc-bin (2.42-2ubuntu5) ... 472s Processing triggers for man-db (2.13.1-1) ... 475s autopkgtest [06:52:18]: test run-example: [----------------------- 481s target_name: chr1 481s query_name: chr1 481s optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001 481s 481s Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 481s 481s Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 481s 481s Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 481s 481s Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 481s 481s Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 481s 481s Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 481s 481s Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 481s 481s Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 481s 481s Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 481s 481s Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 481s 481s Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 481s 481s Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 481s 481s Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 481s 481s Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 481s 481s Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 481s 481s Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 481s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 481s Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 481s 481s Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 481s ||||||||||||||||||||||||||||||||||||||||| 481s Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 481s 481s target_name: chr2 481s query_name: chr1 481s optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971 481s 481s Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488 481s ||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| ||| 481s Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56 481s 481s Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543 481s |||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**| 481s Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104 481s 481s Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599 481s ||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| || 481s Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156 481s 481s Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655 481s ||**||| | ||| || |||| *||| ||*| *|||| |*||*||| || 481s Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200 481s 481s Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707 481s |||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |* 481s Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254 481s 481s Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752 481s ||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*| 481s Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312 481s 481s Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806 481s ||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*| 481s Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363 481s 481s Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846 481s | *||*||||||| ||**| | |||||||| |*||| ||| 481s Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417 481s 481s Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898 481s ||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**||| 481s Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475 481s 481s Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949 481s | |*|| || |*||**| *| || |||**|||*|*|| |||***|*|** 481s Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526 481s 481s Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004 481s *|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *| 481s Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581 481s 481s Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063 481s ||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**|| 481s Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627 481s 481s Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123 481s *|**|||*|***|||||| |**|*| || || || | ||*||*|*|| 481s Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668 481s 481s Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173 482s ||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| |||| 482s Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723 482s 482s Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221 482s || || || |||| || || || |||*|||| |||| |*|| || ||| || 482s Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774 482s 482s Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278 482s || || |*|*|*||*||||| | ||*|| || |||*|*|| | || || 482s Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816 482s 482s Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335 482s |**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||* 482s Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870 482s 482s Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392 482s |*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| || 482s Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913 482s 482s Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450 482s *|| | ||*||| ||*|*||||||||| || *|||| | *|| *||| 482s Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954 482s 482s Target: 4438451 GACACTTCTTTATTATTCAC 4438470 482s *||||| |*|||*||||| 482s Query: 955 --TACTTC-TAATTTTTCAC 971 482s 482s target_name: chr3 482s query_name: chr1 482s optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998 482s 482s Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026 482s || |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |* 482s Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53 482s 482s Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070 482s *|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |* 482s Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111 482s 482s Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126 482s |||| ||*||| |*|||**||*| || |||*||**||||| |||| || 482s Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157 482s 482s Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180 482s |**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| | 482s Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207 482s 482s Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233 482s *||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*|| 482s Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263 482s 482s Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280 482s | *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| | 482s Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318 482s 482s Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334 482s *|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***| 482s Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370 482s 482s Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386 482s *||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| ||||| 482s Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426 482s 482s Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446 482s ||| |*||***||||||**||| || |||| ||*|*| | |*||||*| | 482s Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469 482s 482s Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505 482s ***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****|||| 482s Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517 482s 482s Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547 482s | |||| | |||| || *| || |||| |||| |*||*|||| *|* 482s Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571 482s 482s Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596 482s *|**||| *||| |||**|*|| ||||*| *|||| |*|*||| ||||| 482s Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625 482s 482s Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636 482s ||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| || 482s Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683 482s 482s Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690 482s |||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*|| 482s Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735 482s 482s Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748 482s *||*|*|||||| |||| |*| | ||| || |||||**| || *| 482s Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774 482s 482s Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803 482s |*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*||| 482s Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827 482s 482s Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861 482s |||| |*|*|**|*| || |||| ||| || || *|*| || |||| | 482s Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867 482s 482s Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914 482s ||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*| 482s Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916 482s 482s Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971 482s |||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*| 482s Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964 482s 482s Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002 482s *|||| |*|||||*||| || |*|||*||*|| 482s Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998 482s 482s target_name: chr4 482s query_name: chr1 482s optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001 482s 482s Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050 482s |||||**|| ||*||*|| || | *|*| || ||||||| || || || | 482s Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50 482s 482s Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104 482s ||| || |||***||| |||| |||| |||| || ||| || 482s Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89 482s 482s Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159 482s || |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| | 482s Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138 482s 482s Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219 482s || |||| ||||||| || |*|||||*||||*|*|| 482s Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170 482s 482s Target: 47220 --ATG--TTAAAA-----TATAC--ATTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264 482s ||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*| 482s Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226 482s 482s Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312 482s ||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**|| 482s Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284 482s 482s Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365 482s | | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*| 482s Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335 482s 482s Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419 482s ||*| *||*|||| |||||**|| ||||*|||*|**|||| 482s Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378 482s 482s Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471 482s *||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*| 482s Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434 482s 482s Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525 482s | | |**|||| *||*||||||*|*||***||||| |***|||| |||| 482s Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484 482s 482s Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575 482s *|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*|||| 482s Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536 482s 482s Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620 482s | *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*||| 482s Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591 482s 482s Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669 482s || *|||| | || |**|**|| ||*|**| |*||| ||||||*|**| 482s Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643 482s 482s Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728 482s ||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| |||| 482s Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691 482s 482s Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776 482s |||||| ||***|| || ||| | *||||*||| |*||**||||**|| || 482s Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747 482s 482s Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836 482s |||*|*||||*|| |*|*|||| |||*||| ***|||||||| || || 482s Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790 482s 482s Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878 482s |||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*| 482s Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848 482s 482s Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935 482s |||| || ||*|*|||*|| |*|||||| |||| |**|||||||*||| 482s Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894 482s 482s Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993 482s || | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*| 482s Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939 482s 482s Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048 482s ||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| | 482s Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CATCACATAAT 986 482s 482s Target: 48049 GAA---AT--AAAGTA 48059 482s ||| || ||| || 482s Query: 987 GAATGGATCCAAA-TA 1001 482s 482s target_name: chr5 482s query_name: chr1 482s optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974 482s 482s Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863 482s |||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*||| 482s Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64 482s 482s Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911 482s ||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| | 482s Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 482s 482s Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955 482s *|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| * 482s Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179 482s 482s Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013 482s || |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|* 482s Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226 482s 482s Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063 482s | |*||**|*||||| *||||| *||||| || ||| |**||||| || *|||| 482s Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282 482s 482s Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109 482s *|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| |||| 482s Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335 482s 482s Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147 482s |||*||| ||*|| | |||| ||| *||| *||||| |**||| 482s Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393 482s 482s Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197 482s ||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*| 482s Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448 482s 482s Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229 482s | |||||| ||||*|| | || | ||| |*||*||| || 482s Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507 482s 482s Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270 482s |||****| |||| |*|*|***|||*| ||*|*| ||| || 482s Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562 482s 482s Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329 482s *||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*| 482s Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615 482s 482s Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383 482s *||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*||| 482s Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673 482s 482s Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421 482s | | || |||| ||||| |*|| |||| ||||*||| |||| || 482s Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730 482s 482s Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473 482s || ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*| 482s Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778 482s 482s Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531 482s ||**|| |||*||||*||*|*| | *|||||**|*||*| || ||*|*||||*|| 482s Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830 482s 482s Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591 482s ||*|*||||**||||*| || |*|| |||||**||*|| | ||| 482s Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869 482s 482s Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650 482s *||| || |||*| || *||**||| || ||| ||*|| | ||| | 482s Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906 482s 482s Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706 482s |||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *|| 482s Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957 482s 482s Target: 9707 TGTTGATTGTTTC-CTTT 9723 482s |**|*||| |||| |||| 482s Query: 958 TTCTAATT-TTTCACTTT 974 482s 482s CPU time: 6.684758 seconds 488s target_name: chr1 488s query_name: chr1 488s optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001 488s 488s Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 488s 488s Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 488s 488s Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 488s 488s Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 488s 488s Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 488s 488s Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 488s 488s Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 488s 488s Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 488s 488s Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 488s 488s Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 488s 488s Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 488s 488s Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 488s 488s Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 488s 488s Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 488s 488s Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 488s 488s Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 488s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 488s Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 488s 488s Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 488s ||||||||||||||||||||||||||||||||||||||||| 488s Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 488s 488s target_name: chr2 488s query_name: chr1 488s optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971 488s 488s Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488 488s ||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| ||| 488s Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56 488s 488s Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543 488s |||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**| 488s Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104 488s 488s Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599 488s ||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| || 488s Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156 488s 488s Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655 488s ||**||| | ||| || |||| *||| ||*| *|||| |*||*||| || 488s Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200 488s 488s Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707 488s |||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |* 488s Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254 488s 488s Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752 488s ||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*| 488s Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312 488s 488s Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806 488s ||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*| 488s Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363 488s 488s Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846 488s | *||*||||||| ||**| | |||||||| |*||| ||| 488s Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417 488s 488s Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898 488s ||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**||| 488s Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475 488s 488s Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949 488s | |*|| || |*||**| *| || |||**|||*|*|| |||***|*|** 488s Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526 488s 488s Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004 488s *|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *| 488s Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581 488s 488s Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063 488s ||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**|| 488s Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627 488s 488s Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123 488s *|**|||*|***|||||| |**|*| || || || | ||*||*|*|| 488s Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668 488s 488s Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173 489s ||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| |||| 489s Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723 489s 489s Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221 489s || || || |||| || || || |||*|||| |||| |*|| || ||| || 489s Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774 489s 489s Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278 489s || || |*|*|*||*||||| | ||*|| || |||*|*|| | || || 489s Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816 489s 489s Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335 489s |**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||* 489s Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870 489s 489s Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392 489s |*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| || 489s Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913 489s 489s Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450 489s *|| | ||*||| ||*|*||||||||| || *|||| | *|| *||| 489s Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954 489s 489s Target: 4438451 GACACTTCTTTATTATTCAC 4438470 489s *||||| |*|||*||||| 489s Query: 955 --TACTTC-TAATTTTTCAC 971 489s 489s target_name: chr3 489s query_name: chr1 489s optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998 489s 489s Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026 489s || |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |* 489s Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53 489s 489s Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070 489s *|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |* 489s Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111 489s 489s Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126 489s |||| ||*||| |*|||**||*| || |||*||**||||| |||| || 489s Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157 489s 489s Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180 489s |**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| | 489s Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207 489s 489s Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233 489s *||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*|| 489s Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263 489s 489s Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280 489s | *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| | 489s Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318 489s 489s Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334 489s *|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***| 489s Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370 489s 489s Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386 489s *||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| ||||| 489s Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426 489s 489s Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446 489s ||| |*||***||||||**||| || |||| ||*|*| | |*||||*| | 489s Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469 489s 489s Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505 489s ***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****|||| 489s Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517 489s 489s Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547 489s | |||| | |||| || *| || |||| |||| |*||*|||| *|* 489s Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571 489s 489s Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596 489s *|**||| *||| |||**|*|| ||||*| *|||| |*|*||| ||||| 489s Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625 489s 489s Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636 489s ||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| || 489s Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683 489s 489s Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690 489s |||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*|| 489s Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735 489s 489s Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748 489s *||*|*|||||| |||| |*| | ||| || |||||**| || *| 489s Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774 489s 489s Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803 489s |*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*||| 489s Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827 489s 489s Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861 489s |||| |*|*|**|*| || |||| ||| || || *|*| || |||| | 489s Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867 489s 489s Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914 489s ||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*| 489s Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916 489s 489s Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971 489s |||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*| 489s Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964 489s 489s Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002 489s *|||| |*|||||*||| || |*|||*||*|| 489s Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998 489s 489s target_name: chr4 489s query_name: chr1 489s optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001 489s 489s Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050 489s |||||**|| ||*||*|| || | *|*| || ||||||| || || || | 489s Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50 489s 489s Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104 489s ||| || |||***||| |||| |||| |||| || ||| || 489s Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89 489s 489s Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159 489s || |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| | 489s Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138 489s 489s Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219 489s || |||| ||||||| || |*|||||*||||*|*|| 489s Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170 489s 489s Target: 47220 --ATG--TTAAAA-----TATAC--ATTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264 489s ||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*| 489s Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226 489s 489s Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312 489s ||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**|| 489s Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284 489s 489s Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365 489s | | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*| 489s Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335 489s 489s Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419 489s ||*| *||*|||| |||||**|| ||||*|||*|**|||| 489s Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378 489s 489s Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471 489s *||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*| 489s Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434 489s 489s Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525 489s | | |**|||| *||*||||||*|*||***||||| |***|||| |||| 489s Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484 489s 489s Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575 489s *|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*|||| 489s Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536 489s 489s Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620 489s | *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*||| 489s Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591 489s 489s Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669 489s || *|||| | || |**|**|| ||*|**| |*||| ||||||*|**| 489s Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643 489s 489s Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728 489s ||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| |||| 489s Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691 489s 489s Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776 489s |||||| ||***|| || ||| | *||||*||| |*||**||||**|| || 489s Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747 489s 489s Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836 489s |||*|*||||*|| |*|*|||| |||*||| ***|||||||| || || 489s Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790 489s 489s Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878 489s |||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*| 489s Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848 489s 489s Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935 489s |||| || ||*|*|||*|| |*|||||| |||| |**|||||||*||| 489s Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894 489s 489s Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993 489s || | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*| 489s Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939 489s 489s Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048 489s ||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| | 489s Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CATCACATAAT 986 489s 489s Target: 48049 GAA---AT--AAAGTA 48059 489s ||| || ||| || 489s Query: 987 GAATGGATCCAAA-TA 1001 489s 489s target_name: chr5 489s query_name: chr1 489s optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974 489s 489s Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863 489s |||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*||| 489s Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64 489s 489s Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911 489s ||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| | 489s Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 489s 489s Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955 489s *|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| * 489s Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179 489s 489s Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013 489s || |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|* 489s Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226 489s 489s Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063 489s | |*||**|*||||| *||||| *||||| || ||| |**||||| || *|||| 489s Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282 489s 489s Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109 489s *|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| |||| 489s Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335 489s 489s Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147 489s |||*||| ||*|| | |||| ||| *||| *||||| |**||| 489s Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393 489s 489s Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197 489s ||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*| 489s Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448 489s 489s Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229 489s | |||||| ||||*|| | || | ||| |*||*||| || 489s Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507 489s 489s Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270 489s |||****| |||| |*|*|***|||*| ||*|*| ||| || 489s Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562 489s 489s Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329 489s *||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*| 489s Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615 489s 489s Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383 489s *||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*||| 489s Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673 489s 489s Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421 489s | | || |||| ||||| |*|| |||| ||||*||| |||| || 489s Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730 489s 489s Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473 489s || ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*| 489s Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778 489s 489s Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531 489s ||**|| |||*||||*||*|*| | *|||||**|*||*| || ||*|*||||*|| 489s Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830 489s 489s Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591 489s ||*|*||||**||||*| || |*|| |||||**||*|| | ||| 489s Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869 489s 489s Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650 489s *||| || |||*| || *||**||| || ||| ||*|| | ||| | 489s Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906 489s 489s Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706 489s |||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *|| 489s Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957 489s 489s Target: 9707 TGTTGATTGTTTC-CTTT 9723 489s |**|*||| |||| |||| 489s Query: 958 TTCTAATT-TTTCACTTT 974 489s 489s CPU time: 6.710521 seconds 489s autopkgtest [06:52:32]: test run-example: -----------------------] 489s autopkgtest [06:52:32]: test run-example: - - - - - - - - - - results - - - - - - - - - - 489s run-example PASS 490s autopkgtest [06:52:33]: @@@@@@@@@@@@@@@@@@@@ summary 490s build-lib PASS 490s build-lib-java PASS 490s run-example PASS