0s autopkgtest [01:41:19]: starting date and time: 2025-10-26 01:41:19+0000 0s autopkgtest [01:41:19]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [01:41:19]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5_mtxd0j/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:rust-coreutils --apt-upgrade lambda-align2 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=rust-coreutils/0.3.0-0ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-ppc64el-1.secgroup --name adt-resolute-ppc64el-lambda-align2-20251026-014119-juju-7f2275-prod-proposed-migration-environment-20-3612dc94-eeac-48ca-b0a0-3453e250dc3a --image adt/ubuntu-resolute-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-ppc64el-lambda-align2-20251026-014119-juju-7f2275-prod-proposed-migration-environment-20-3612dc94-eeac-48ca-b0a0-3453e250dc3a from image adt/ubuntu-resolute-ppc64el-server-20251026.img (UUID 85266b2b-ff15-446c-b3e7-72f61d0e75cb)... 48s autopkgtest [01:42:07]: testbed dpkg architecture: ppc64el 49s autopkgtest [01:42:08]: testbed apt version: 3.1.8ubuntu1 49s autopkgtest [01:42:08]: @@@@@@@@@@@@@@@@@@@@ test bed setup 49s autopkgtest [01:42:08]: testbed release detected to be: None 50s autopkgtest [01:42:09]: updating testbed package index (apt update) 50s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 51s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 51s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 51s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 51s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [59.0 kB] 51s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [454 kB] 51s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 51s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [16.5 kB] 51s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el Packages [149 kB] 51s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted ppc64el Packages [940 B] 51s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe ppc64el Packages [340 kB] 51s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse ppc64el Packages [4596 B] 51s Fetched 1117 kB in 1s (990 kB/s) 52s Reading package lists... 53s Failed to check for VM: Permission denied 53s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 53s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 53s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 53s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 54s Reading package lists... 54s Reading package lists... 54s Building dependency tree... 54s Reading state information... 54s Calculating upgrade... 55s The following packages will be upgraded: 55s rust-coreutils 55s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 55s Need to get 3792 kB of archives. 55s After this operation, 334 kB of additional disk space will be used. 55s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main ppc64el rust-coreutils ppc64el 0.3.0-0ubuntu2 [3792 kB] 58s dpkg-preconfigure: unable to re-open stdin: No such file or directory 58s Fetched 3792 kB in 3s (1419 kB/s) 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76482 files and directories currently installed.) 58s Preparing to unpack .../rust-coreutils_0.3.0-0ubuntu2_ppc64el.deb ... 58s Unpacking rust-coreutils (0.3.0-0ubuntu2) over (0.2.2-0ubuntu2) ... 58s Setting up rust-coreutils (0.3.0-0ubuntu2) ... 58s Processing triggers for man-db (2.13.1-1) ... 59s autopkgtest [01:42:18]: upgrading testbed (apt dist-upgrade and autopurge) 59s Reading package lists... 59s Building dependency tree... 59s Reading state information... 60s Calculating upgrade... 60s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 60s Reading package lists... 60s Building dependency tree... 60s Reading state information... 60s Solving dependencies... 60s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 63s autopkgtest [01:42:22]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:02:41 UTC 2025 63s autopkgtest [01:42:22]: @@@@@@@@@@@@@@@@@@@@ apt-source lambda-align2 65s Get:1 http://ftpmaster.internal/ubuntu resolute/universe lambda-align2 2.0.1-3 (dsc) [2178 B] 65s Get:2 http://ftpmaster.internal/ubuntu resolute/universe lambda-align2 2.0.1-3 (tar) [346 kB] 65s Get:3 http://ftpmaster.internal/ubuntu resolute/universe lambda-align2 2.0.1-3 (diff) [17.6 kB] 65s gpgv: Signature made Thu Nov 28 15:59:17 2024 UTC 65s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 65s gpgv: Can't check signature: No public key 65s dpkg-source: warning: cannot verify inline signature for ./lambda-align2_2.0.1-3.dsc: no acceptable signature found 65s autopkgtest [01:42:24]: testing package lambda-align2 version 2.0.1-3 66s autopkgtest [01:42:25]: build not needed 66s autopkgtest [01:42:25]: test run-tests: preparing testbed 66s Reading package lists... 67s Building dependency tree... 67s Reading state information... 67s Solving dependencies... 67s The following NEW packages will be installed: 67s autoconf automake autopoint autotools-dev build-essential cmake cmake-data 67s cpp cpp-15 cpp-15-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu debhelper 67s debugedit dh-autoreconf dh-strip-nondeterminism dwz g++ g++-15 67s g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-15 67s gcc-15-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gettext 67s intltool-debian lambda-align2 libarchive-zip-perl libasan8 libbz2-dev 67s libcc1-0 libdebhelper-perl libfile-stripnondeterminism-perl libgcc-15-dev 67s libgomp1 libisl23 libitm1 libjsoncpp26 liblsan0 libmbedcrypto16 libmbedtls21 67s libmbedx509-7 libmpc3 libquadmath0 librhash1 libseqan2-dev libstdc++-15-dev 67s libtool libtsan2 libubsan1 m4 ncbi-blast+ ncbi-data po-debconf zlib1g-dev 67s 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded. 67s Need to get 106 MB of archives. 67s After this operation, 415 MB of additional disk space will be used. 67s Get:1 http://ftpmaster.internal/ubuntu resolute/main ppc64el m4 ppc64el 1.4.19-8 [280 kB] 67s Get:2 http://ftpmaster.internal/ubuntu resolute/main ppc64el autoconf all 2.72-3.1ubuntu1 [384 kB] 68s Get:3 http://ftpmaster.internal/ubuntu resolute/main ppc64el autotools-dev all 20240727.1 [43.4 kB] 68s Get:4 http://ftpmaster.internal/ubuntu resolute/main ppc64el automake all 1:1.17-4ubuntu1 [572 kB] 68s Get:5 http://ftpmaster.internal/ubuntu resolute/main ppc64el autopoint all 0.23.1-2build2 [619 kB] 68s Get:6 http://ftpmaster.internal/ubuntu resolute/main ppc64el libisl23 ppc64el 0.27-1 [882 kB] 68s Get:7 http://ftpmaster.internal/ubuntu resolute/main ppc64el libmpc3 ppc64el 1.3.1-1build3 [62.6 kB] 68s Get:8 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15-powerpc64le-linux-gnu ppc64el 15.2.0-5ubuntu1 [11.4 MB] 70s Get:9 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-15 ppc64el 15.2.0-5ubuntu1 [1036 B] 70s Get:10 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [5746 B] 70s Get:11 http://ftpmaster.internal/ubuntu resolute/main ppc64el cpp ppc64el 4:15.2.0-4ubuntu1 [22.4 kB] 70s Get:12 http://ftpmaster.internal/ubuntu resolute/main ppc64el libcc1-0 ppc64el 15.2.0-5ubuntu1 [49.0 kB] 70s Get:13 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgomp1 ppc64el 15.2.0-5ubuntu1 [169 kB] 70s Get:14 http://ftpmaster.internal/ubuntu resolute/main ppc64el libitm1 ppc64el 15.2.0-5ubuntu1 [32.3 kB] 70s Get:15 http://ftpmaster.internal/ubuntu resolute/main ppc64el libasan8 ppc64el 15.2.0-5ubuntu1 [3006 kB] 70s Get:16 http://ftpmaster.internal/ubuntu resolute/main ppc64el liblsan0 ppc64el 15.2.0-5ubuntu1 [1374 kB] 70s Get:17 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtsan2 ppc64el 15.2.0-5ubuntu1 [2729 kB] 71s Get:18 http://ftpmaster.internal/ubuntu resolute/main ppc64el libubsan1 ppc64el 15.2.0-5ubuntu1 [1231 kB] 71s Get:19 http://ftpmaster.internal/ubuntu resolute/main ppc64el libquadmath0 ppc64el 15.2.0-5ubuntu1 [160 kB] 71s Get:20 http://ftpmaster.internal/ubuntu resolute/main ppc64el libgcc-15-dev ppc64el 15.2.0-5ubuntu1 [1670 kB] 71s Get:21 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15-powerpc64le-linux-gnu ppc64el 15.2.0-5ubuntu1 [22.4 MB] 72s Get:22 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-15 ppc64el 15.2.0-5ubuntu1 [523 kB] 72s Get:23 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [1220 B] 72s Get:24 http://ftpmaster.internal/ubuntu resolute/main ppc64el gcc ppc64el 4:15.2.0-4ubuntu1 [5032 B] 72s Get:25 http://ftpmaster.internal/ubuntu resolute/main ppc64el libstdc++-15-dev ppc64el 15.2.0-5ubuntu1 [2744 kB] 72s Get:26 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15-powerpc64le-linux-gnu ppc64el 15.2.0-5ubuntu1 [13.0 MB] 72s Get:27 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-15 ppc64el 15.2.0-5ubuntu1 [23.7 kB] 72s Get:28 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:15.2.0-4ubuntu1 [970 B] 72s Get:29 http://ftpmaster.internal/ubuntu resolute/main ppc64el g++ ppc64el 4:15.2.0-4ubuntu1 [1092 B] 72s Get:30 http://ftpmaster.internal/ubuntu resolute/main ppc64el build-essential ppc64el 12.12ubuntu1 [5094 B] 72s Get:31 http://ftpmaster.internal/ubuntu resolute/main ppc64el cmake-data all 3.31.6-2ubuntu6 [2295 kB] 72s Get:32 http://ftpmaster.internal/ubuntu resolute/main ppc64el libjsoncpp26 ppc64el 1.9.6-3 [91.3 kB] 72s Get:33 http://ftpmaster.internal/ubuntu resolute/main ppc64el librhash1 ppc64el 1.4.6-1 [151 kB] 72s Get:34 http://ftpmaster.internal/ubuntu resolute/main ppc64el cmake ppc64el 3.31.6-2ubuntu6 [12.9 MB] 73s Get:35 http://ftpmaster.internal/ubuntu resolute/main ppc64el libdebhelper-perl all 13.24.2ubuntu1 [95.7 kB] 73s Get:36 http://ftpmaster.internal/ubuntu resolute/main ppc64el libtool all 2.5.4-4build1 [169 kB] 73s Get:37 http://ftpmaster.internal/ubuntu resolute/main ppc64el dh-autoreconf all 21 [12.5 kB] 73s Get:38 http://ftpmaster.internal/ubuntu resolute/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] 73s Get:39 http://ftpmaster.internal/ubuntu resolute/main ppc64el libfile-stripnondeterminism-perl all 1.14.2-1 [20.4 kB] 73s Get:40 http://ftpmaster.internal/ubuntu resolute/main ppc64el dh-strip-nondeterminism all 1.14.2-1 [5098 B] 73s Get:41 http://ftpmaster.internal/ubuntu resolute/main ppc64el debugedit ppc64el 1:5.2-3 [57.3 kB] 73s Get:42 http://ftpmaster.internal/ubuntu resolute/main ppc64el dwz ppc64el 0.16-2 [142 kB] 73s Get:43 http://ftpmaster.internal/ubuntu resolute/main ppc64el gettext ppc64el 0.23.1-2build2 [1177 kB] 73s Get:44 http://ftpmaster.internal/ubuntu resolute/main ppc64el intltool-debian all 0.35.0+20060710.6 [23.2 kB] 73s Get:45 http://ftpmaster.internal/ubuntu resolute/main ppc64el po-debconf all 1.0.21+nmu1 [233 kB] 73s Get:46 http://ftpmaster.internal/ubuntu resolute/main ppc64el debhelper all 13.24.2ubuntu1 [896 kB] 73s Get:47 http://ftpmaster.internal/ubuntu resolute/universe ppc64el lambda-align2 ppc64el 2.0.1-3 [1394 kB] 73s Get:48 http://ftpmaster.internal/ubuntu resolute/main ppc64el libbz2-dev ppc64el 1.0.8-6build1 [50.0 kB] 73s Get:49 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libmbedcrypto16 ppc64el 3.6.2-3ubuntu1 [293 kB] 73s Get:50 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libmbedx509-7 ppc64el 3.6.2-3ubuntu1 [40.1 kB] 73s Get:51 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libmbedtls21 ppc64el 3.6.2-3ubuntu1 [135 kB] 73s Get:52 http://ftpmaster.internal/ubuntu resolute/universe ppc64el libseqan2-dev all 2.4.0+dfsg-16 [1206 kB] 73s Get:53 http://ftpmaster.internal/ubuntu resolute/universe ppc64el ncbi-data all 6.1.20170106+dfsg2-6 [3969 kB] 73s Get:54 http://ftpmaster.internal/ubuntu resolute/universe ppc64el ncbi-blast+ ppc64el 2.16.0+ds-7 [16.1 MB] 74s Get:55 http://ftpmaster.internal/ubuntu resolute/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu2 [903 kB] 74s Fetched 106 MB in 7s (14.4 MB/s) 75s Selecting previously unselected package m4. 75s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76542 files and directories currently installed.) 75s Preparing to unpack .../00-m4_1.4.19-8_ppc64el.deb ... 75s Unpacking m4 (1.4.19-8) ... 75s Selecting previously unselected package autoconf. 75s Preparing to unpack .../01-autoconf_2.72-3.1ubuntu1_all.deb ... 75s Unpacking autoconf (2.72-3.1ubuntu1) ... 75s Selecting previously unselected package autotools-dev. 75s Preparing to unpack .../02-autotools-dev_20240727.1_all.deb ... 75s Unpacking autotools-dev (20240727.1) ... 75s Selecting previously unselected package automake. 75s Preparing to unpack .../03-automake_1%3a1.17-4ubuntu1_all.deb ... 75s Unpacking automake (1:1.17-4ubuntu1) ... 75s Selecting previously unselected package autopoint. 75s Preparing to unpack .../04-autopoint_0.23.1-2build2_all.deb ... 75s Unpacking autopoint (0.23.1-2build2) ... 75s Selecting previously unselected package libisl23:ppc64el. 75s Preparing to unpack .../05-libisl23_0.27-1_ppc64el.deb ... 75s Unpacking libisl23:ppc64el (0.27-1) ... 75s Selecting previously unselected package libmpc3:ppc64el. 75s Preparing to unpack .../06-libmpc3_1.3.1-1build3_ppc64el.deb ... 75s Unpacking libmpc3:ppc64el (1.3.1-1build3) ... 75s Selecting previously unselected package cpp-15-powerpc64le-linux-gnu. 75s Preparing to unpack .../07-cpp-15-powerpc64le-linux-gnu_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking cpp-15-powerpc64le-linux-gnu (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package cpp-15. 75s Preparing to unpack .../08-cpp-15_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking cpp-15 (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 75s Preparing to unpack .../09-cpp-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 75s Unpacking cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 75s Selecting previously unselected package cpp. 75s Preparing to unpack .../10-cpp_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 75s Unpacking cpp (4:15.2.0-4ubuntu1) ... 75s Selecting previously unselected package libcc1-0:ppc64el. 75s Preparing to unpack .../11-libcc1-0_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libcc1-0:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package libgomp1:ppc64el. 75s Preparing to unpack .../12-libgomp1_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libgomp1:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package libitm1:ppc64el. 75s Preparing to unpack .../13-libitm1_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libitm1:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package libasan8:ppc64el. 75s Preparing to unpack .../14-libasan8_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libasan8:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package liblsan0:ppc64el. 75s Preparing to unpack .../15-liblsan0_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking liblsan0:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package libtsan2:ppc64el. 75s Preparing to unpack .../16-libtsan2_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libtsan2:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package libubsan1:ppc64el. 75s Preparing to unpack .../17-libubsan1_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libubsan1:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package libquadmath0:ppc64el. 75s Preparing to unpack .../18-libquadmath0_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libquadmath0:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package libgcc-15-dev:ppc64el. 75s Preparing to unpack .../19-libgcc-15-dev_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking libgcc-15-dev:ppc64el (15.2.0-5ubuntu1) ... 75s Selecting previously unselected package gcc-15-powerpc64le-linux-gnu. 75s Preparing to unpack .../20-gcc-15-powerpc64le-linux-gnu_15.2.0-5ubuntu1_ppc64el.deb ... 75s Unpacking gcc-15-powerpc64le-linux-gnu (15.2.0-5ubuntu1) ... 76s Selecting previously unselected package gcc-15. 76s Preparing to unpack .../21-gcc-15_15.2.0-5ubuntu1_ppc64el.deb ... 76s Unpacking gcc-15 (15.2.0-5ubuntu1) ... 76s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 76s Preparing to unpack .../22-gcc-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 76s Unpacking gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 76s Selecting previously unselected package gcc. 76s Preparing to unpack .../23-gcc_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 76s Unpacking gcc (4:15.2.0-4ubuntu1) ... 76s Selecting previously unselected package libstdc++-15-dev:ppc64el. 76s Preparing to unpack .../24-libstdc++-15-dev_15.2.0-5ubuntu1_ppc64el.deb ... 76s Unpacking libstdc++-15-dev:ppc64el (15.2.0-5ubuntu1) ... 76s Selecting previously unselected package g++-15-powerpc64le-linux-gnu. 76s Preparing to unpack .../25-g++-15-powerpc64le-linux-gnu_15.2.0-5ubuntu1_ppc64el.deb ... 76s Unpacking g++-15-powerpc64le-linux-gnu (15.2.0-5ubuntu1) ... 76s Selecting previously unselected package g++-15. 76s Preparing to unpack .../26-g++-15_15.2.0-5ubuntu1_ppc64el.deb ... 76s Unpacking g++-15 (15.2.0-5ubuntu1) ... 76s Selecting previously unselected package g++-powerpc64le-linux-gnu. 76s Preparing to unpack .../27-g++-powerpc64le-linux-gnu_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 76s Unpacking g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 76s Selecting previously unselected package g++. 76s Preparing to unpack .../28-g++_4%3a15.2.0-4ubuntu1_ppc64el.deb ... 76s Unpacking g++ (4:15.2.0-4ubuntu1) ... 76s Selecting previously unselected package build-essential. 76s Preparing to unpack .../29-build-essential_12.12ubuntu1_ppc64el.deb ... 76s Unpacking build-essential (12.12ubuntu1) ... 76s Selecting previously unselected package cmake-data. 76s Preparing to unpack .../30-cmake-data_3.31.6-2ubuntu6_all.deb ... 76s Unpacking cmake-data (3.31.6-2ubuntu6) ... 77s Selecting previously unselected package libjsoncpp26:ppc64el. 77s Preparing to unpack .../31-libjsoncpp26_1.9.6-3_ppc64el.deb ... 77s Unpacking libjsoncpp26:ppc64el (1.9.6-3) ... 77s Selecting previously unselected package librhash1:ppc64el. 77s Preparing to unpack .../32-librhash1_1.4.6-1_ppc64el.deb ... 77s Unpacking librhash1:ppc64el (1.4.6-1) ... 77s Selecting previously unselected package cmake. 77s Preparing to unpack .../33-cmake_3.31.6-2ubuntu6_ppc64el.deb ... 77s Unpacking cmake (3.31.6-2ubuntu6) ... 77s Selecting previously unselected package libdebhelper-perl. 77s Preparing to unpack .../34-libdebhelper-perl_13.24.2ubuntu1_all.deb ... 77s Unpacking libdebhelper-perl (13.24.2ubuntu1) ... 77s Selecting previously unselected package libtool. 77s Preparing to unpack .../35-libtool_2.5.4-4build1_all.deb ... 77s Unpacking libtool (2.5.4-4build1) ... 77s Selecting previously unselected package dh-autoreconf. 77s Preparing to unpack .../36-dh-autoreconf_21_all.deb ... 77s Unpacking dh-autoreconf (21) ... 77s Selecting previously unselected package libarchive-zip-perl. 77s Preparing to unpack .../37-libarchive-zip-perl_1.68-1_all.deb ... 77s Unpacking libarchive-zip-perl (1.68-1) ... 77s Selecting previously unselected package libfile-stripnondeterminism-perl. 77s Preparing to unpack .../38-libfile-stripnondeterminism-perl_1.14.2-1_all.deb ... 77s Unpacking libfile-stripnondeterminism-perl (1.14.2-1) ... 77s Selecting previously unselected package dh-strip-nondeterminism. 77s Preparing to unpack .../39-dh-strip-nondeterminism_1.14.2-1_all.deb ... 77s Unpacking dh-strip-nondeterminism (1.14.2-1) ... 77s Selecting previously unselected package debugedit. 77s Preparing to unpack .../40-debugedit_1%3a5.2-3_ppc64el.deb ... 77s Unpacking debugedit (1:5.2-3) ... 77s Selecting previously unselected package dwz. 77s Preparing to unpack .../41-dwz_0.16-2_ppc64el.deb ... 77s Unpacking dwz (0.16-2) ... 77s Selecting previously unselected package gettext. 77s Preparing to unpack .../42-gettext_0.23.1-2build2_ppc64el.deb ... 77s Unpacking gettext (0.23.1-2build2) ... 77s Selecting previously unselected package intltool-debian. 77s Preparing to unpack .../43-intltool-debian_0.35.0+20060710.6_all.deb ... 77s Unpacking intltool-debian (0.35.0+20060710.6) ... 77s Selecting previously unselected package po-debconf. 77s Preparing to unpack .../44-po-debconf_1.0.21+nmu1_all.deb ... 77s Unpacking po-debconf (1.0.21+nmu1) ... 77s Selecting previously unselected package debhelper. 77s Preparing to unpack .../45-debhelper_13.24.2ubuntu1_all.deb ... 77s Unpacking debhelper (13.24.2ubuntu1) ... 77s Selecting previously unselected package lambda-align2. 77s Preparing to unpack .../46-lambda-align2_2.0.1-3_ppc64el.deb ... 77s Unpacking lambda-align2 (2.0.1-3) ... 77s Selecting previously unselected package libbz2-dev:ppc64el. 77s Preparing to unpack .../47-libbz2-dev_1.0.8-6build1_ppc64el.deb ... 77s Unpacking libbz2-dev:ppc64el (1.0.8-6build1) ... 77s Selecting previously unselected package libmbedcrypto16:ppc64el. 77s Preparing to unpack .../48-libmbedcrypto16_3.6.2-3ubuntu1_ppc64el.deb ... 77s Unpacking libmbedcrypto16:ppc64el (3.6.2-3ubuntu1) ... 77s Selecting previously unselected package libmbedx509-7:ppc64el. 77s Preparing to unpack .../49-libmbedx509-7_3.6.2-3ubuntu1_ppc64el.deb ... 77s Unpacking libmbedx509-7:ppc64el (3.6.2-3ubuntu1) ... 77s Selecting previously unselected package libmbedtls21:ppc64el. 77s Preparing to unpack .../50-libmbedtls21_3.6.2-3ubuntu1_ppc64el.deb ... 77s Unpacking libmbedtls21:ppc64el (3.6.2-3ubuntu1) ... 77s Selecting previously unselected package libseqan2-dev. 77s Preparing to unpack .../51-libseqan2-dev_2.4.0+dfsg-16_all.deb ... 77s Unpacking libseqan2-dev (2.4.0+dfsg-16) ... 78s Selecting previously unselected package ncbi-data. 78s Preparing to unpack .../52-ncbi-data_6.1.20170106+dfsg2-6_all.deb ... 78s Unpacking ncbi-data (6.1.20170106+dfsg2-6) ... 78s Selecting previously unselected package ncbi-blast+. 78s Preparing to unpack .../53-ncbi-blast+_2.16.0+ds-7_ppc64el.deb ... 78s Unpacking ncbi-blast+ (2.16.0+ds-7) ... 78s Selecting previously unselected package zlib1g-dev:ppc64el. 78s Preparing to unpack .../54-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_ppc64el.deb ... 78s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 78s Setting up ncbi-data (6.1.20170106+dfsg2-6) ... 78s Setting up libarchive-zip-perl (1.68-1) ... 78s Setting up libdebhelper-perl (13.24.2ubuntu1) ... 78s Setting up m4 (1.4.19-8) ... 78s Setting up libgomp1:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up libseqan2-dev (2.4.0+dfsg-16) ... 78s Setting up autotools-dev (20240727.1) ... 78s Setting up libjsoncpp26:ppc64el (1.9.6-3) ... 78s Setting up libquadmath0:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up lambda-align2 (2.0.1-3) ... 78s Setting up libmpc3:ppc64el (1.3.1-1build3) ... 78s Setting up autopoint (0.23.1-2build2) ... 78s Setting up autoconf (2.72-3.1ubuntu1) ... 78s Setting up libubsan1:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 78s Setting up dwz (0.16-2) ... 78s Setting up libasan8:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up debugedit (1:5.2-3) ... 78s Setting up cmake-data (3.31.6-2ubuntu6) ... 78s Setting up librhash1:ppc64el (1.4.6-1) ... 78s Setting up libmbedcrypto16:ppc64el (3.6.2-3ubuntu1) ... 78s Setting up libtsan2:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up libisl23:ppc64el (0.27-1) ... 78s Setting up libcc1-0:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up liblsan0:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up libitm1:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up libbz2-dev:ppc64el (1.0.8-6build1) ... 78s Setting up automake (1:1.17-4ubuntu1) ... 78s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 78s Setting up libfile-stripnondeterminism-perl (1.14.2-1) ... 78s Setting up gettext (0.23.1-2build2) ... 78s Setting up libgcc-15-dev:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up intltool-debian (0.35.0+20060710.6) ... 78s Setting up cpp-15-powerpc64le-linux-gnu (15.2.0-5ubuntu1) ... 78s Setting up libmbedx509-7:ppc64el (3.6.2-3ubuntu1) ... 78s Setting up libstdc++-15-dev:ppc64el (15.2.0-5ubuntu1) ... 78s Setting up libmbedtls21:ppc64el (3.6.2-3ubuntu1) ... 78s Setting up dh-strip-nondeterminism (1.14.2-1) ... 78s Setting up cpp-15 (15.2.0-5ubuntu1) ... 78s Setting up cmake (3.31.6-2ubuntu6) ... 78s Setting up cpp-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 78s Setting up gcc-15-powerpc64le-linux-gnu (15.2.0-5ubuntu1) ... 78s Setting up po-debconf (1.0.21+nmu1) ... 78s Setting up ncbi-blast+ (2.16.0+ds-7) ... 78s Setting up gcc-15 (15.2.0-5ubuntu1) ... 78s Setting up gcc-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 78s Setting up cpp (4:15.2.0-4ubuntu1) ... 78s Setting up g++-15-powerpc64le-linux-gnu (15.2.0-5ubuntu1) ... 78s Setting up libtool (2.5.4-4build1) ... 78s Setting up gcc (4:15.2.0-4ubuntu1) ... 78s Setting up dh-autoreconf (21) ... 78s Setting up g++-15 (15.2.0-5ubuntu1) ... 78s Setting up g++-powerpc64le-linux-gnu (4:15.2.0-4ubuntu1) ... 78s Setting up debhelper (13.24.2ubuntu1) ... 78s Setting up g++ (4:15.2.0-4ubuntu1) ... 78s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 78s Setting up build-essential (12.12ubuntu1) ... 78s Processing triggers for libc-bin (2.42-0ubuntu3) ... 78s Processing triggers for man-db (2.13.1-1) ... 79s Processing triggers for install-info (7.1.1-1ubuntu1) ... 81s autopkgtest [01:42:40]: test run-tests: [----------------------- 81s + mkdir test_build 81s + ls debian/*.md5sums.gz 81s + gzip --keep debian/db_nucl_fm.md5sums 81s + gzip --keep debian/db_nucl_sa.md5sums 81s + gzip --keep debian/db_prot_fm.md5sums 81s + gzip --keep debian/db_prot_sa.md5sums 81s + gzip --keep debian/db_trans_fm.md5sums 81s + gzip --keep debian/db_trans_sa.md5sums 81s + cp --backup debian/db_nucl_fm.md5sums.gz debian/db_nucl_sa.md5sums.gz debian/db_prot_fm.md5sums.gz debian/db_prot_sa.md5sums.gz debian/db_trans_fm.md5sums.gz debian/db_trans_sa.md5sums.gz tests/ 81s + cd test_build 81s + cmake -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON ../ 81s CMake Deprecation Warning at CMakeLists.txt:5 (cmake_minimum_required): 81s Compatibility with CMake < 3.10 will be removed from a future version of 81s CMake. 81s 81s Update the VERSION argument value. Or, use the ... syntax 81s to tell CMake that the project requires at least but has been updated 81s to work with policies introduced by or earlier. 81s 81s 81s Compiler Detection 81s -- The CXX compiler identification is GNU 15.2.0 81s -- Detecting CXX compiler ABI info 81s -- Detecting CXX compiler ABI info - done 81s -- Check for working CXX compiler: /usr/bin/c++ - skipped 81s -- Detecting CXX compile features 81s -- Detecting CXX compile features - done 81s 81s Dependency detection 82s CMake Warning (dev) at /usr/share/cmake/seqan/seqan-config.cmake:218 (EXEC_PROGRAM): 82s Policy CMP0153 is not set: The exec_program command should not be called. 82s Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy 82s command to set the policy and suppress this warning. 82s 82s Use execute_process() instead. 82s Call Stack (most recent call first): 82s src/CMakeLists.txt:34 (find_package) 82s This warning is for project developers. Use -Wno-dev to suppress it. 82s 82s -- These dependencies were found: 82s -- The requirements were met. 82s -- LAMBDA version is: 2.0.1 82s OPENMP TRUE -fopenmp 82s ZLIB TRUE 1.3.1 82s BZIP2 TRUE 1.0.8 82s SEQAN TRUE 2.4.0 82s 82s Build configuration 82s LAMBDA_FASTBUILD OFF 82s LAMBDA_LINGAPS_OPT OFF 82s LAMBDA_LONG_PROTEIN_SUBJ_SEQS OFF 82s LAMBDA_MMAPPED_DB OFF 82s LAMBDA_NATIVE_BUILD ON 82s LAMBDA_MULTIOPT_BUILD OFF 82s LAMBDA_STATIC_BUILD OFF 82s -- The following options are selected for the build: 82s -- Run 'cmake -LH' to get a comment on each option. 82s -- Remove CMakeCache.txt and re-run cmake with -DOPTIONNAME=ON|OFF to change an option. 82s 82s Setting up unit tests 82s CMake Deprecation Warning at tests/CMakeLists.txt:5 (cmake_minimum_required): 82s Compatibility with CMake < 3.10 will be removed from a future version of 82s CMake. 82s 82s Update the VERSION argument value. Or, use the ... syntax 82s to tell CMake that the project requires at least but has been updated 82s to work with policies introduced by or earlier. 82s 82s 82s -- Configuring done (1.0s) 82s CMake Warning: 82s Manually-specified variables were not used by the project: 82s 82s CMAKE_EXPORT_NO_PACKAGE_REGISTRY 82s 82s 82s -- Generating done (0.0s) 82s -- Build files have been written to: /tmp/autopkgtest.pX50nG/build.ojA/src/test_build 82s + grep bin/ 82s + dpkg -L lambda-align2 82s + ln -s /usr/bin/lambda2 bin/ 82s + mkdir -p libexec 82s + dpkg -L lambda-align2 82s + grep libexec/ 82s + cd tests 82s + set +e 82s + nproc 82s + ctest --parallel 2 -I 1,10 --output-on-failure 82s Test project /tmp/autopkgtest.pX50nG/build.ojA/src/test_build/tests 82s Start 1: test_mkindex_blastn_sa 82s Start 2: test_mkindex_blastn_fm 85s 1/10 Test #1: test_mkindex_blastn_sa ........... Passed 2.82 sec 85s Start 3: test_mkindex_blastp_sa 85s 2/10 Test #2: test_mkindex_blastn_fm ........... Passed 2.86 sec 85s Start 4: test_mkindex_blastp_fm 85s 3/10 Test #3: test_mkindex_blastp_sa ........... Passed 0.09 sec 85s Start 5: test_mkindex_blastx_sa 85s 4/10 Test #4: test_mkindex_blastp_fm ........... Passed 0.07 sec 85s Start 6: test_mkindex_blastx_fm 85s 5/10 Test #5: test_mkindex_blastx_sa ........... Passed 0.07 sec 85s Start 7: test_mkindex_tblastn_sa 85s 6/10 Test #6: test_mkindex_blastx_fm ........... Passed 0.08 sec 85s Start 8: test_mkindex_tblastn_fm 85s 7/10 Test #8: test_mkindex_tblastn_fm .......... Passed 0.35 sec 85s Start 9: test_mkindex_tblastx_sa 85s 8/10 Test #7: test_mkindex_tblastn_sa .......... Passed 0.38 sec 85s Start 10: test_mkindex_tblastx_fm 86s 9/10 Test #9: test_mkindex_tblastx_sa .......... Passed 0.35 sec 86s 10/10 Test #10: test_mkindex_tblastx_fm .......... Passed 0.35 sec 86s 86s 100% tests passed, 0 tests failed out of 10 86s 86s Total Test time (real) = 3.71 sec 86s + RESULT=0 86s + ls tests/*~ 86s + exit 0 86s autopkgtest [01:42:45]: test run-tests: -----------------------] 86s run-tests PASS 86s autopkgtest [01:42:45]: test run-tests: - - - - - - - - - - results - - - - - - - - - - 87s autopkgtest [01:42:46]: @@@@@@@@@@@@@@@@@@@@ summary 87s run-tests PASS