0s autopkgtest [17:31:47]: starting date and time: 2026-01-30 17:31:47+0000 0s autopkgtest [17:31:47]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [17:31:47]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.m3sl2yjs/out --timeout-copy=6000 --needs-internet=try -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rncl --apt-upgrade r-cran-rotl --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-rncl/0.8.9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-12.secgroup --name adt-resolute-i386-r-cran-rotl-20260130-173147-juju-7f2275-prod-proposed-migration-environment-2-95fcd4de-660d-49f2-a965-582f5c52b7fe --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-i386-r-cran-rotl-20260130-173147-juju-7f2275-prod-proposed-migration-environment-2-95fcd4de-660d-49f2-a965-582f5c52b7fe from image adt/ubuntu-resolute-amd64-server-20260130.img (UUID afba56f8-6ab4-44eb-9e07-036bcbd7054f)... 72s autopkgtest [17:32:59]: testbed dpkg architecture: amd64 72s autopkgtest [17:32:59]: testbed apt version: 3.1.14 73s autopkgtest [17:33:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 73s autopkgtest [17:33:00]: testbed release detected to be: None 73s autopkgtest [17:33:00]: updating testbed package index (apt update) 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 74s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 74s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 74s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [105 kB] 74s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [4676 B] 74s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1267 kB] 74s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [30.9 kB] 74s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [122 kB] 74s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [105 kB] 74s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [4348 B] 74s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [20.9 kB] 74s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [6164 B] 74s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 74s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [395 kB] 74s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1007 kB] 74s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [30.1 kB] 74s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [27.4 kB] 74s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [4720 B] 74s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [1304 B] 75s Fetched 3256 kB in 1s (3272 kB/s) 76s Reading package lists... 76s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 76s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 76s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 76s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 77s Reading package lists... 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 77s Calculating upgrade... 77s The following packages will be upgraded: 77s 3cpio bzip2 inetutils-telnet libbz2-1.0 libsqlite3-0 rng-tools-debian telnet 77s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 77s Need to get 1234 kB of archives. 77s After this operation, 18.4 kB disk space will be freed. 77s Get:1 http://ftpmaster.internal/ubuntu resolute/universe amd64 rng-tools-debian amd64 2.6build1 [46.1 kB] 77s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 bzip2 amd64 1.0.8-6build2 [34.3 kB] 77s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-1.0 amd64 1.0.8-6build2 [37.0 kB] 77s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libsqlite3-0 amd64 3.46.1-9 [722 kB] 77s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 inetutils-telnet amd64 2:2.7-2ubuntu1 [107 kB] 77s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 telnet all 0.17+2.7-2ubuntu1 [3636 B] 77s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.13.1-1ubuntu1 [284 kB] 78s dpkg-preconfigure: unable to re-open stdin: No such file or directory 78s Fetched 1234 kB in 0s (5508 kB/s) 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124211 files and directories currently installed.) 78s Preparing to unpack .../rng-tools-debian_2.6build1_amd64.deb ... 78s Unpacking rng-tools-debian (2.6build1) over (2.6) ... 78s Preparing to unpack .../bzip2_1.0.8-6build2_amd64.deb ... 78s Unpacking bzip2 (1.0.8-6build2) over (1.0.8-6build1) ... 78s Preparing to unpack .../libbz2-1.0_1.0.8-6build2_amd64.deb ... 78s Unpacking libbz2-1.0:amd64 (1.0.8-6build2) over (1.0.8-6build1) ... 78s Setting up libbz2-1.0:amd64 (1.0.8-6build2) ... 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124211 files and directories currently installed.) 78s Preparing to unpack .../libsqlite3-0_3.46.1-9_amd64.deb ... 78s Unpacking libsqlite3-0:amd64 (3.46.1-9) over (3.46.1-8) ... 78s Preparing to unpack .../inetutils-telnet_2%3a2.7-2ubuntu1_amd64.deb ... 78s Unpacking inetutils-telnet (2:2.7-2ubuntu1) over (2:2.6-4ubuntu1) ... 78s Preparing to unpack .../telnet_0.17+2.7-2ubuntu1_all.deb ... 78s Unpacking telnet (0.17+2.7-2ubuntu1) over (0.17+2.6-4ubuntu1) ... 78s Preparing to unpack .../3cpio_0.13.1-1ubuntu1_amd64.deb ... 78s Unpacking 3cpio (0.13.1-1ubuntu1) over (0.12.0-1ubuntu1) ... 78s Setting up 3cpio (0.13.1-1ubuntu1) ... 78s Setting up libsqlite3-0:amd64 (3.46.1-9) ... 78s Setting up inetutils-telnet (2:2.7-2ubuntu1) ... 78s Setting up bzip2 (1.0.8-6build2) ... 78s Setting up rng-tools-debian (2.6build1) ... 79s Setting up telnet (0.17+2.7-2ubuntu1) ... 79s Processing triggers for man-db (2.13.1-1) ... 79s Processing triggers for libc-bin (2.42-2ubuntu4) ... 79s autopkgtest [17:33:06]: upgrading testbed (apt dist-upgrade and autopurge) 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Calculating upgrade... 80s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Solving dependencies... 80s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 81s autopkgtest [17:33:08]: rebooting testbed after setup commands that affected boot 109s autopkgtest [17:33:36]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:49:02 UTC 2026 111s autopkgtest [17:33:38]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-rotl 112s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-rotl 3.1.0-1 (dsc) [2164 B] 112s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-rotl 3.1.0-1 (tar) [514 kB] 112s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-rotl 3.1.0-1 (diff) [3616 B] 112s gpgv: Signature made Mon Jun 26 18:30:34 2023 UTC 112s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 112s gpgv: issuer "tille@debian.org" 112s gpgv: Can't check signature: No public key 112s dpkg-source: warning: cannot verify inline signature for ./r-cran-rotl_3.1.0-1.dsc: no acceptable signature found 112s autopkgtest [17:33:39]: testing package r-cran-rotl version 3.1.0-1 113s autopkgtest [17:33:40]: build not needed 114s autopkgtest [17:33:41]: test run-unit-test: preparing testbed 114s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s Solving dependencies... 115s The following NEW packages will be installed: 115s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 115s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1 115s libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 115s liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 115s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 115s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 115s libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-ape r-cran-askpass 115s r-cran-brio r-cran-callr r-cran-cli r-cran-crayon r-cran-curl r-cran-desc 115s r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-fs r-cran-glue 115s r-cran-hms r-cran-httr r-cran-jsonlite r-cran-lattice r-cran-lifecycle 115s r-cran-littler r-cran-magrittr r-cran-mime r-cran-nlme r-cran-openssl 115s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload 115s r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress r-cran-ps 115s r-cran-r6 r-cran-rcpp r-cran-rentrez r-cran-rlang r-cran-rncl r-cran-rotl 115s r-cran-rprojroot r-cran-sys r-cran-testthat r-cran-vctrs r-cran-waldo 115s r-cran-withr r-cran-xml unzip x11-common xdg-utils zip 115s 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. 115s Need to get 65.0 MB of archives. 115s After this operation, 124 MB of additional disk space will be used. 115s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 115s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB] 115s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB] 115s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB] 115s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB] 115s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 115s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB] 115s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB] 115s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B] 115s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 115s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB] 115s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB] 115s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2 [49.9 kB] 115s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-12ubuntu1 [939 kB] 115s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-12ubuntu1 [151 kB] 115s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB] 115s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.1-1 [519 kB] 115s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 115s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB] 115s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu2 [152 kB] 115s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 115s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 115s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB] 115s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB] 115s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB] 115s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB] 115s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB] 115s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB] 115s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB] 115s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB] 115s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB] 115s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1 [16.4 kB] 115s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1 [1036 kB] 115s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB] 115s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB] 115s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 115s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB] 115s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B] 115s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 115s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB] 115s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu2 [178 kB] 115s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB] 115s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 115s Get:44 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB] 116s Get:45 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB] 116s Get:46 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB] 116s Get:47 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.21-2 [84.4 kB] 116s Get:48 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 116s Get:49 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB] 116s Get:50 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB] 116s Get:51 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB] 116s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 116s Get:53 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 116s Get:54 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 116s Get:55 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 116s Get:56 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 116s Get:57 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 116s Get:58 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 116s Get:59 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 116s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 116s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB] 116s Get:62 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 116s Get:63 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB] 116s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB] 116s Get:65 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 116s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 116s Get:67 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB] 116s Get:68 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 116s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 116s Get:70 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 116s Get:71 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hms all 1.1.4-1 [102 kB] 116s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 116s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 116s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 116s Get:75 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 116s Get:76 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 116s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 116s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB] 116s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB] 116s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 116s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] 116s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB] 116s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml amd64 3.99-0.20-1 [1751 kB] 116s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rentrez all 1.2.3+dfsg-1build1 [121 kB] 116s Get:85 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-rncl amd64 0.8.9-1 [548 kB] 116s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rotl all 3.1.0-1 [541 kB] 116s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB] 116s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 116s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 116s Preconfiguring packages ... 117s Fetched 65.0 MB in 2s (37.5 MB/s) 117s Selecting previously unselected package fonts-dejavu-mono. 117s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124211 files and directories currently installed.) 117s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8build1_all.deb ... 117s Unpacking fonts-dejavu-mono (2.37-8build1) ... 117s Selecting previously unselected package fonts-dejavu-core. 117s Preparing to unpack .../01-fonts-dejavu-core_2.37-8build1_all.deb ... 117s Unpacking fonts-dejavu-core (2.37-8build1) ... 117s Selecting previously unselected package fontconfig-config. 117s Preparing to unpack .../02-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ... 117s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 117s Selecting previously unselected package libfontconfig1:amd64. 117s Preparing to unpack .../03-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ... 117s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ... 117s Selecting previously unselected package fontconfig. 117s Preparing to unpack .../04-fontconfig_2.17.1-3ubuntu1_amd64.deb ... 117s Unpacking fontconfig (2.17.1-3ubuntu1) ... 117s Selecting previously unselected package libblas3:amd64. 117s Preparing to unpack .../05-libblas3_3.12.1-7ubuntu1_amd64.deb ... 117s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ... 117s Selecting previously unselected package libpixman-1-0:amd64. 117s Preparing to unpack .../06-libpixman-1-0_0.46.4-1_amd64.deb ... 117s Unpacking libpixman-1-0:amd64 (0.46.4-1) ... 117s Selecting previously unselected package libxcb-render0:amd64. 117s Preparing to unpack .../07-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ... 117s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ... 117s Selecting previously unselected package libxcb-shm0:amd64. 117s Preparing to unpack .../08-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ... 117s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ... 117s Selecting previously unselected package libxrender1:amd64. 117s Preparing to unpack .../09-libxrender1_1%3a0.9.12-1_amd64.deb ... 117s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 117s Selecting previously unselected package libcairo2:amd64. 117s Preparing to unpack .../10-libcairo2_1.18.4-3_amd64.deb ... 117s Unpacking libcairo2:amd64 (1.18.4-3) ... 117s Selecting previously unselected package libdatrie1:amd64. 117s Preparing to unpack .../11-libdatrie1_0.2.14-1_amd64.deb ... 117s Unpacking libdatrie1:amd64 (0.2.14-1) ... 117s Selecting previously unselected package libdeflate0:amd64. 117s Preparing to unpack .../12-libdeflate0_1.23-2_amd64.deb ... 117s Unpacking libdeflate0:amd64 (1.23-2) ... 117s Selecting previously unselected package libgfortran5:amd64. 117s Preparing to unpack .../13-libgfortran5_15.2.0-12ubuntu1_amd64.deb ... 117s Unpacking libgfortran5:amd64 (15.2.0-12ubuntu1) ... 117s Selecting previously unselected package libgomp1:amd64. 117s Preparing to unpack .../14-libgomp1_15.2.0-12ubuntu1_amd64.deb ... 117s Unpacking libgomp1:amd64 (15.2.0-12ubuntu1) ... 117s Selecting previously unselected package libgraphite2-3:amd64. 117s Preparing to unpack .../15-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ... 117s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ... 117s Selecting previously unselected package libharfbuzz0b:amd64. 117s Preparing to unpack .../16-libharfbuzz0b_12.3.1-1_amd64.deb ... 117s Unpacking libharfbuzz0b:amd64 (12.3.1-1) ... 117s Selecting previously unselected package x11-common. 117s Preparing to unpack .../17-x11-common_1%3a7.7+24ubuntu1_all.deb ... 117s Unpacking x11-common (1:7.7+24ubuntu1) ... 117s Selecting previously unselected package libice6:amd64. 117s Preparing to unpack .../18-libice6_2%3a1.1.1-1build1_amd64.deb ... 117s Unpacking libice6:amd64 (2:1.1.1-1build1) ... 117s Selecting previously unselected package libjpeg-turbo8:amd64. 117s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-4ubuntu2_amd64.deb ... 117s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 117s Selecting previously unselected package libjpeg8:amd64. 117s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_amd64.deb ... 117s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 117s Selecting previously unselected package liblapack3:amd64. 117s Preparing to unpack .../21-liblapack3_3.12.1-7ubuntu1_amd64.deb ... 117s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ... 117s Selecting previously unselected package liblerc4:amd64. 117s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ... 117s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ... 117s Selecting previously unselected package libthai-data. 117s Preparing to unpack .../23-libthai-data_0.1.30-1_all.deb ... 117s Unpacking libthai-data (0.1.30-1) ... 117s Selecting previously unselected package libthai0:amd64. 117s Preparing to unpack .../24-libthai0_0.1.30-1_amd64.deb ... 117s Unpacking libthai0:amd64 (0.1.30-1) ... 117s Selecting previously unselected package libpango-1.0-0:amd64. 117s Preparing to unpack .../25-libpango-1.0-0_1.57.0-1_amd64.deb ... 117s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ... 117s Selecting previously unselected package libpangoft2-1.0-0:amd64. 117s Preparing to unpack .../26-libpangoft2-1.0-0_1.57.0-1_amd64.deb ... 117s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ... 117s Selecting previously unselected package libpangocairo-1.0-0:amd64. 117s Preparing to unpack .../27-libpangocairo-1.0-0_1.57.0-1_amd64.deb ... 117s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ... 117s Selecting previously unselected package libpaper2:amd64. 117s Preparing to unpack .../28-libpaper2_2.2.5-0.3build1_amd64.deb ... 117s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ... 117s Selecting previously unselected package libpaper-utils. 117s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3build1_amd64.deb ... 117s Unpacking libpaper-utils (2.2.5-0.3build1) ... 117s Selecting previously unselected package libsharpyuv0:amd64. 117s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1build1_amd64.deb ... 117s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ... 117s Selecting previously unselected package libsm6:amd64. 117s Preparing to unpack .../31-libsm6_2%3a1.2.6-1_amd64.deb ... 117s Unpacking libsm6:amd64 (2:1.2.6-1) ... 117s Selecting previously unselected package libtcl8.6:amd64. 117s Preparing to unpack .../32-libtcl8.6_8.6.17+dfsg-1_amd64.deb ... 117s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1) ... 117s Selecting previously unselected package libjbig0:amd64. 117s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu3_amd64.deb ... 117s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ... 117s Selecting previously unselected package libwebp7:amd64. 117s Preparing to unpack .../34-libwebp7_1.5.0-0.1build1_amd64.deb ... 117s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ... 117s Selecting previously unselected package libtiff6:amd64. 117s Preparing to unpack .../35-libtiff6_4.7.0-3ubuntu3_amd64.deb ... 117s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ... 117s Selecting previously unselected package libxft2:amd64. 117s Preparing to unpack .../36-libxft2_2.3.6-1build2_amd64.deb ... 117s Unpacking libxft2:amd64 (2.3.6-1build2) ... 117s Selecting previously unselected package libxss1:amd64. 117s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build4_amd64.deb ... 117s Unpacking libxss1:amd64 (1:1.2.3-1build4) ... 117s Selecting previously unselected package libtk8.6:amd64. 117s Preparing to unpack .../38-libtk8.6_8.6.17-1_amd64.deb ... 117s Unpacking libtk8.6:amd64 (8.6.17-1) ... 117s Selecting previously unselected package libxt6t64:amd64. 117s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.3_amd64.deb ... 117s Unpacking libxt6t64:amd64 (1:1.2.1-1.3) ... 117s Selecting previously unselected package zip. 117s Preparing to unpack .../40-zip_3.0-15ubuntu2_amd64.deb ... 117s Unpacking zip (3.0-15ubuntu2) ... 117s Selecting previously unselected package unzip. 117s Preparing to unpack .../41-unzip_6.0-29ubuntu1_amd64.deb ... 117s Unpacking unzip (6.0-29ubuntu1) ... 117s Selecting previously unselected package xdg-utils. 117s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu2_all.deb ... 117s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 118s Selecting previously unselected package r-base-core. 118s Preparing to unpack .../43-r-base-core_4.5.2-1ubuntu2_amd64.deb ... 118s Unpacking r-base-core (4.5.2-1ubuntu2) ... 118s Selecting previously unselected package r-cran-lattice. 118s Preparing to unpack .../44-r-cran-lattice_0.22-7-1_amd64.deb ... 118s Unpacking r-cran-lattice (0.22-7-1) ... 118s Selecting previously unselected package r-cran-nlme. 118s Preparing to unpack .../45-r-cran-nlme_3.1.168-1_amd64.deb ... 118s Unpacking r-cran-nlme (3.1.168-1) ... 118s Selecting previously unselected package r-cran-littler. 118s Preparing to unpack .../46-r-cran-littler_0.3.21-2_amd64.deb ... 118s Unpacking r-cran-littler (0.3.21-2) ... 118s Selecting previously unselected package r-cran-pkgkitten. 118s Preparing to unpack .../47-r-cran-pkgkitten_0.2.4-1_all.deb ... 118s Unpacking r-cran-pkgkitten (0.2.4-1) ... 118s Selecting previously unselected package r-cran-rcpp. 118s Preparing to unpack .../48-r-cran-rcpp_1.1.0-1_amd64.deb ... 118s Unpacking r-cran-rcpp (1.1.0-1) ... 118s Selecting previously unselected package r-cran-digest. 118s Preparing to unpack .../49-r-cran-digest_0.6.39-1_amd64.deb ... 118s Unpacking r-cran-digest (0.6.39-1) ... 118s Selecting previously unselected package r-cran-ape. 118s Preparing to unpack .../50-r-cran-ape_5.8-1-1_amd64.deb ... 118s Unpacking r-cran-ape (5.8-1-1) ... 118s Selecting previously unselected package r-cran-sys. 118s Preparing to unpack .../51-r-cran-sys_3.4.3-1_amd64.deb ... 118s Unpacking r-cran-sys (3.4.3-1) ... 118s Selecting previously unselected package r-cran-askpass. 118s Preparing to unpack .../52-r-cran-askpass_1.2.1-1_amd64.deb ... 118s Unpacking r-cran-askpass (1.2.1-1) ... 118s Selecting previously unselected package r-cran-brio. 118s Preparing to unpack .../53-r-cran-brio_1.1.5-1_amd64.deb ... 118s Unpacking r-cran-brio (1.1.5-1) ... 118s Selecting previously unselected package r-cran-ps. 118s Preparing to unpack .../54-r-cran-ps_1.9.0-1_amd64.deb ... 118s Unpacking r-cran-ps (1.9.0-1) ... 118s Selecting previously unselected package r-cran-r6. 118s Preparing to unpack .../55-r-cran-r6_2.6.1-1_all.deb ... 118s Unpacking r-cran-r6 (2.6.1-1) ... 118s Selecting previously unselected package r-cran-processx. 118s Preparing to unpack .../56-r-cran-processx_3.8.6-1_amd64.deb ... 118s Unpacking r-cran-processx (3.8.6-1) ... 118s Selecting previously unselected package r-cran-callr. 118s Preparing to unpack .../57-r-cran-callr_3.7.6-1_all.deb ... 118s Unpacking r-cran-callr (3.7.6-1) ... 118s Selecting previously unselected package r-cran-cli. 118s Preparing to unpack .../58-r-cran-cli_3.6.4-1_amd64.deb ... 118s Unpacking r-cran-cli (3.6.4-1) ... 118s Selecting previously unselected package r-cran-crayon. 118s Preparing to unpack .../59-r-cran-crayon_1.5.3-1_all.deb ... 118s Unpacking r-cran-crayon (1.5.3-1) ... 118s Selecting previously unselected package r-cran-curl. 118s Preparing to unpack .../60-r-cran-curl_7.0.0+dfsg-1_amd64.deb ... 118s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 118s Selecting previously unselected package r-cran-desc. 118s Preparing to unpack .../61-r-cran-desc_1.4.3-1_all.deb ... 118s Unpacking r-cran-desc (1.4.3-1) ... 118s Selecting previously unselected package r-cran-diffobj. 118s Preparing to unpack .../62-r-cran-diffobj_0.3.5-1build1_amd64.deb ... 118s Unpacking r-cran-diffobj (0.3.5-1build1) ... 118s Selecting previously unselected package r-cran-evaluate. 118s Preparing to unpack .../63-r-cran-evaluate_1.0.3-1_all.deb ... 118s Unpacking r-cran-evaluate (1.0.3-1) ... 118s Selecting previously unselected package r-cran-fs. 118s Preparing to unpack .../64-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 118s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 118s Selecting previously unselected package r-cran-glue. 118s Preparing to unpack .../65-r-cran-glue_1.8.0-1_amd64.deb ... 118s Unpacking r-cran-glue (1.8.0-1) ... 118s Selecting previously unselected package r-cran-rlang. 118s Preparing to unpack .../66-r-cran-rlang_1.1.5-3_amd64.deb ... 118s Unpacking r-cran-rlang (1.1.5-3) ... 118s Selecting previously unselected package r-cran-lifecycle. 118s Preparing to unpack .../67-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 118s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 118s Selecting previously unselected package r-cran-pkgconfig. 118s Preparing to unpack .../68-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 118s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 118s Selecting previously unselected package r-cran-vctrs. 118s Preparing to unpack .../69-r-cran-vctrs_0.6.5-1_amd64.deb ... 118s Unpacking r-cran-vctrs (0.6.5-1) ... 118s Selecting previously unselected package r-cran-hms. 118s Preparing to unpack .../70-r-cran-hms_1.1.4-1_all.deb ... 118s Unpacking r-cran-hms (1.1.4-1) ... 118s Selecting previously unselected package r-cran-jsonlite. 118s Preparing to unpack .../71-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 118s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 118s Selecting previously unselected package r-cran-mime. 118s Preparing to unpack .../72-r-cran-mime_0.12-2_amd64.deb ... 118s Unpacking r-cran-mime (0.12-2) ... 118s Selecting previously unselected package r-cran-openssl. 118s Preparing to unpack .../73-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 118s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 118s Selecting previously unselected package r-cran-httr. 118s Preparing to unpack .../74-r-cran-httr_1.4.7+dfsg-1_all.deb ... 118s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 118s Selecting previously unselected package r-cran-magrittr. 118s Preparing to unpack .../75-r-cran-magrittr_2.0.3-1_amd64.deb ... 118s Unpacking r-cran-magrittr (2.0.3-1) ... 118s Selecting previously unselected package r-cran-pkgbuild. 118s Preparing to unpack .../76-r-cran-pkgbuild_1.4.8-1_all.deb ... 118s Unpacking r-cran-pkgbuild (1.4.8-1) ... 118s Selecting previously unselected package r-cran-rprojroot. 118s Preparing to unpack .../77-r-cran-rprojroot_2.1.1-1_all.deb ... 118s Unpacking r-cran-rprojroot (2.1.1-1) ... 118s Selecting previously unselected package r-cran-pkgload. 118s Preparing to unpack .../78-r-cran-pkgload_1.4.1-1_all.deb ... 118s Unpacking r-cran-pkgload (1.4.1-1) ... 118s Selecting previously unselected package r-cran-praise. 118s Preparing to unpack .../79-r-cran-praise_1.0.0-4build2_all.deb ... 118s Unpacking r-cran-praise (1.0.0-4build2) ... 118s Selecting previously unselected package r-cran-prettyunits. 118s Preparing to unpack .../80-r-cran-prettyunits_1.2.0-1_all.deb ... 118s Unpacking r-cran-prettyunits (1.2.0-1) ... 118s Selecting previously unselected package r-cran-progress. 118s Preparing to unpack .../81-r-cran-progress_1.2.3-1_all.deb ... 118s Unpacking r-cran-progress (1.2.3-1) ... 118s Selecting previously unselected package r-cran-xml. 118s Preparing to unpack .../82-r-cran-xml_3.99-0.20-1_amd64.deb ... 118s Unpacking r-cran-xml (3.99-0.20-1) ... 118s Selecting previously unselected package r-cran-rentrez. 118s Preparing to unpack .../83-r-cran-rentrez_1.2.3+dfsg-1build1_all.deb ... 118s Unpacking r-cran-rentrez (1.2.3+dfsg-1build1) ... 118s Selecting previously unselected package r-cran-rncl. 118s Preparing to unpack .../84-r-cran-rncl_0.8.9-1_amd64.deb ... 118s Unpacking r-cran-rncl (0.8.9-1) ... 118s Selecting previously unselected package r-cran-rotl. 118s Preparing to unpack .../85-r-cran-rotl_3.1.0-1_all.deb ... 118s Unpacking r-cran-rotl (3.1.0-1) ... 118s Selecting previously unselected package r-cran-waldo. 118s Preparing to unpack .../86-r-cran-waldo_0.6.2-1_all.deb ... 118s Unpacking r-cran-waldo (0.6.2-1) ... 118s Selecting previously unselected package r-cran-withr. 118s Preparing to unpack .../87-r-cran-withr_3.0.2+dfsg-1_all.deb ... 118s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 118s Selecting previously unselected package r-cran-testthat. 118s Preparing to unpack .../88-r-cran-testthat_3.2.3-1_amd64.deb ... 118s Unpacking r-cran-testthat (3.2.3-1) ... 118s Setting up libgraphite2-3:amd64 (1.3.14-11ubuntu1) ... 118s Setting up libpixman-1-0:amd64 (0.46.4-1) ... 118s Setting up libsharpyuv0:amd64 (1.5.0-0.1build1) ... 118s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu2) ... 118s Setting up libxrender1:amd64 (1:0.9.12-1) ... 118s Setting up libdatrie1:amd64 (0.2.14-1) ... 118s Setting up libxcb-render0:amd64 (1.17.0-2ubuntu1) ... 118s Setting up unzip (6.0-29ubuntu1) ... 118s Setting up x11-common (1:7.7+24ubuntu1) ... 119s Setting up libdeflate0:amd64 (1.23-2) ... 119s Setting up libxcb-shm0:amd64 (1.17.0-2ubuntu1) ... 119s Setting up libgomp1:amd64 (15.2.0-12ubuntu1) ... 119s Setting up libjbig0:amd64 (2.1-6.1ubuntu3) ... 119s Setting up zip (3.0-15ubuntu2) ... 119s Setting up libblas3:amd64 (3.12.1-7ubuntu1) ... 119s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 119s Setting up fonts-dejavu-mono (2.37-8build1) ... 119s Setting up libtcl8.6:amd64 (8.6.17+dfsg-1) ... 119s Setting up fonts-dejavu-core (2.37-8build1) ... 119s Setting up libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 119s Setting up libgfortran5:amd64 (15.2.0-12ubuntu1) ... 119s Setting up libwebp7:amd64 (1.5.0-0.1build1) ... 119s Setting up libharfbuzz0b:amd64 (12.3.1-1) ... 119s Setting up libthai-data (0.1.30-1) ... 119s Setting up libxss1:amd64 (1:1.2.3-1build4) ... 119s Setting up libpaper2:amd64 (2.2.5-0.3build1) ... 119s Setting up xdg-utils (1.2.1-2ubuntu2) ... 119s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 119s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 119s Setting up libice6:amd64 (2:1.1.1-1build1) ... 119s Setting up liblapack3:amd64 (3.12.1-7ubuntu1) ... 119s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 119s Setting up fontconfig-config (2.17.1-3ubuntu1) ... 119s Setting up libpaper-utils (2.2.5-0.3build1) ... 119s Setting up libthai0:amd64 (0.1.30-1) ... 119s Setting up libtiff6:amd64 (4.7.0-3ubuntu3) ... 119s Setting up libfontconfig1:amd64 (2.17.1-3ubuntu1) ... 119s Setting up libsm6:amd64 (2:1.2.6-1) ... 119s Setting up fontconfig (2.17.1-3ubuntu1) ... 121s Regenerating fonts cache... done. 121s Setting up libxft2:amd64 (2.3.6-1build2) ... 121s Setting up libtk8.6:amd64 (8.6.17-1) ... 121s Setting up libpango-1.0-0:amd64 (1.57.0-1) ... 121s Setting up libcairo2:amd64 (1.18.4-3) ... 121s Setting up libxt6t64:amd64 (1:1.2.1-1.3) ... 121s Setting up libpangoft2-1.0-0:amd64 (1.57.0-1) ... 121s Setting up libpangocairo-1.0-0:amd64 (1.57.0-1) ... 121s Setting up r-base-core (4.5.2-1ubuntu2) ... 121s Creating config file /etc/R/Renviron with new version 121s Setting up r-cran-crayon (1.5.3-1) ... 121s Setting up r-cran-lattice (0.22-7-1) ... 121s Setting up r-cran-ps (1.9.0-1) ... 121s Setting up r-cran-nlme (3.1.168-1) ... 121s Setting up r-cran-xml (3.99-0.20-1) ... 121s Setting up r-cran-r6 (2.6.1-1) ... 121s Setting up r-cran-pkgkitten (0.2.4-1) ... 121s Setting up r-cran-magrittr (2.0.3-1) ... 121s Setting up r-cran-littler (0.3.21-2) ... 121s Setting up r-cran-fs (1.6.5+dfsg-1) ... 121s Setting up r-cran-rcpp (1.1.0-1) ... 121s Setting up r-cran-curl (7.0.0+dfsg-1) ... 121s Setting up r-cran-brio (1.1.5-1) ... 121s Setting up r-cran-diffobj (0.3.5-1build1) ... 121s Setting up r-cran-rlang (1.1.5-3) ... 121s Setting up r-cran-sys (3.4.3-1) ... 121s Setting up r-cran-withr (3.0.2+dfsg-1) ... 121s Setting up r-cran-processx (3.8.6-1) ... 121s Setting up r-cran-mime (0.12-2) ... 121s Setting up r-cran-praise (1.0.0-4build2) ... 121s Setting up r-cran-digest (0.6.39-1) ... 121s Setting up r-cran-ape (5.8-1-1) ... 121s Setting up r-cran-evaluate (1.0.3-1) ... 121s Setting up r-cran-prettyunits (1.2.0-1) ... 121s Setting up r-cran-glue (1.8.0-1) ... 121s Setting up r-cran-cli (3.6.4-1) ... 121s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ... 121s Setting up r-cran-rprojroot (2.1.1-1) ... 121s Setting up r-cran-askpass (1.2.1-1) ... 121s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 121s Setting up r-cran-pkgconfig (2.0.3-2build2) ... 121s Setting up r-cran-waldo (0.6.2-1) ... 121s Setting up r-cran-vctrs (0.6.5-1) ... 121s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 121s Setting up r-cran-callr (3.7.6-1) ... 121s Setting up r-cran-desc (1.4.3-1) ... 121s Setting up r-cran-httr (1.4.7+dfsg-1) ... 121s Setting up r-cran-hms (1.1.4-1) ... 121s Setting up r-cran-pkgbuild (1.4.8-1) ... 121s Setting up r-cran-progress (1.2.3-1) ... 121s Setting up r-cran-pkgload (1.4.1-1) ... 121s Setting up r-cran-rncl (0.8.9-1) ... 121s Setting up r-cran-rentrez (1.2.3+dfsg-1build1) ... 121s Setting up r-cran-testthat (3.2.3-1) ... 121s Setting up r-cran-rotl (3.1.0-1) ... 121s Processing triggers for libc-bin (2.42-2ubuntu4) ... 121s Processing triggers for man-db (2.13.1-1) ... 122s Processing triggers for install-info (7.2-5) ... 123s autopkgtest [17:33:50]: test environment configured for cross building 123s autopkgtest [17:33:50]: test run-unit-test: [----------------------- 123s 123s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 123s Copyright (C) 2025 The R Foundation for Statistical Computing 123s Platform: x86_64-pc-linux-gnu 123s 123s R is free software and comes with ABSOLUTELY NO WARRANTY. 123s You are welcome to redistribute it under certain conditions. 123s Type 'license()' or 'licence()' for distribution details. 123s 123s R is a collaborative project with many contributors. 123s Type 'contributors()' for more information and 123s 'citation()' on how to cite R or R packages in publications. 123s 123s Type 'demo()' for some demos, 'help()' for on-line help, or 123s 'help.start()' for an HTML browser interface to help. 123s Type 'q()' to quit R. 123s 123s > ### 123s > library(testthat) 123s Loading required package: rotl 123s > test_check("rotl") 124s [ FAIL 0 | WARN 0 | SKIP 206 | PASS 37 ] 124s 124s == Skipped tests (206) ========================================================= 126s * On CRAN (206): 'test-api-studies.R:9:3', 'test-api-studies.R:17:3', 126s 'test-api-studies.R:25:3', 'test-api-studies.R:33:3', 126s 'test-api-studies.R:44:3', 'test-api-studies.R:52:3', 126s 'test-api-studies.R:65:3', 'test-api-studies.R:73:3', 126s 'test-api-studies.R:81:3', 'test-api-studies.R:89:3', 126s 'test-api-studies.R:97:3', 'test-api-studies.R:105:3', 126s 'test-api-studies.R:113:3', 'test-api-studies.R:122:3', 126s 'test-api-studies.R:135:3', 'test-api-studies.R:143:3', 126s 'test-api-studies.R:156:3', 'test-api-studies.R:164:3', 126s 'test-api-studies.R:172:3', 'test-api-studies.R:180:3', 126s 'test-api-studies.R:188:3', 'test-api-studies.R:201:3', 126s 'test-api-studies.R:209:3', 'test-api-studies.R:217:3', 126s 'test-api-studies.R:225:3', 'test-api-studies.R:233:3', 126s 'test-api-studies.R:241:3', 'test-api-studies.R:249:3', 126s 'test-api-taxonomy.R:10:3', 'test-api-taxonomy.R:18:3', 126s 'test-api-taxonomy.R:26:3', 'test-api-taxonomy.R:34:3', 126s 'test-api-taxonomy.R:50:3', 'test-api-taxonomy.R:72:3', 126s 'test-api-taxonomy.R:80:3', 'test-api-taxonomy.R:88:3', 126s 'test-api-taxonomy.R:102:3', 'test-api-taxonomy.R:110:3', 126s 'test-api-tnrs.R:9:3', 'test-api-tnrs.R:17:3', 'test-api-tnrs.R:25:3', 126s 'test-api-tnrs.R:33:3', 'test-api-tnrs.R:41:3', 'test-api-tnrs.R:49:3', 126s 'test-api-tnrs.R:58:3', 'test-api-tnrs.R:71:3', 'test-api-tnrs.R:79:3', 126s 'test-api-tol.R:8:3', 'test-api-tol.R:20:3', 'test-api-tol.R:32:3', 126s 'test-api-tol.R:44:3', 'test-api-tol.R:52:3', 'test-api-tol.R:64:3', 126s 'test-api-tol.R:72:3', 'test-api-tol.R:80:3', 'test-base.R:4:3', 126s 'test-base.R:10:3', 'test-base.R:16:3', 'test-deduplicate_labels.R:42:3', 126s 'test-external.R:9:3', 'test-external.R:15:3', 'test-external.R:25:3', 126s 'test-external.R:35:3', 'test-match_names.R:25:3', 'test-match_names.R:33:3', 126s 'test-match_names.R:44:3', 'test-match_names.R:55:3', 126s 'test-match_names.R:66:3', 'test-match_names.R:74:3', 126s 'test-match_names.R:82:3', 'test-match_names.R:90:3', 126s 'test-match_names.R:106:3', 'test-match_names.R:118:3', 126s 'test-match_names.R:126:3', 'test-match_names.R:134:3', 126s 'test-match_names.R:143:3', 'test-match_names.R:167:3', 126s 'test-match_names.R:173:3', 'test-match_names.R:179:3', 126s 'test-match_names.R:187:3', 'test-match_names.R:194:3', 126s 'test-match_names.R:200:3', 'test-match_names.R:224:3', 126s 'test-match_names.R:235:3', 'test-match_names.R:241:3', 126s 'test-match_names.R:248:3', 'test-match_names.R:256:3', 126s 'test-match_names.R:265:3', 'test-match_names.R:276:3', 126s 'test-match_names.R:284:3', 'test-match_names.R:293:3', 126s 'test-match_names.R:311:3', 'test-match_names.R:319:3', 126s 'test-match_names.R:331:3', 'test-match_names.R:349:3', 126s 'test-match_names.R:360:3', 'test-match_names.R:374:3', 126s 'test-match_names.R:386:3', 'test-match_names.R:407:3', 126s 'test-match_names.R:417:3', 'test-match_names.R:427:3', 126s 'test-match_names.R:437:3', 'test-match_names.R:462:3', 126s 'test-match_names.R:471:3', 'test-match_names.R:478:3', 126s 'test-match_names.R:485:3', 'test-taxonomy.R:8:3', 'test-taxonomy.R:14:3', 126s 'test-taxonomy.R:25:3', 'test-taxonomy.R:33:3', 'test-taxonomy.R:40:3', 126s 'test-taxonomy.R:46:3', 'test-taxonomy.R:53:3', 'test-taxonomy.R:64:3', 126s 'test-taxonomy.R:83:3', 'test-taxonomy.R:102:3', 'test-taxonomy.R:119:3', 126s 'test-taxonomy.R:138:3', 'test-taxonomy.R:157:3', 'test-taxonomy.R:170:3', 126s 'test-taxonomy.R:178:3', 'test-taxonomy.R:186:3', 'test-taxonomy.R:194:3', 126s 'test-taxonomy.R:202:3', 'test-taxonomy.R:210:3', 'test-taxonomy.R:220:3', 126s 'test-taxonomy.R:229:3', 'test-taxonomy.R:243:3', 'test-taxonomy.R:250:3', 126s 'test-taxonomy.R:258:3', 'test-taxonomy.R:266:3', 'test-taxonomy.R:272:3', 126s 'test-taxonomy.R:278:3', 'test-taxonomy.R:287:3', 'test-taxonomy.R:306:3', 126s 'test-taxonomy.R:312:3', 'test-taxonomy.R:320:3', 'test-taxonomy.R:328:3', 126s 'test-taxonomy.R:337:3', 'test-taxonomy.R:349:3', 'test-taxonomy.R:369:3', 126s 'test-taxonomy.R:381:3', 'test-taxonomy.R:395:3', 'test-taxonomy.R:403:3', 126s 'test-taxonomy.R:410:3', 'test-taxonomy.R:418:3', 'test-taxonomy.R:429:3', 126s 'test-taxonomy.R:437:3', 'test-taxonomy.R:445:3', 'test-taxonomy.R:453:3', 126s 'test-taxonomy.R:470:3', 'test-tnrs.R:8:3', 'test-tnrs.R:16:3', 126s 'test-tnrs.R:24:3', 'test-tnrs.R:32:3', 'test-tnrs.R:38:3', 126s 'test-tnrs.R:47:3', 'test-tnrs.R:67:3', 'test-tnrs.R:78:3', 126s 'test-tol.R:12:3', 'test-tol.R:40:3', 'test-tol.R:49:3', 'test-tol.R:59:3', 126s 'test-tol.R:69:3', 'test-tol.R:79:3', 'test-tol.R:91:3', 'test-tol.R:104:3', 126s 'test-tol.R:117:3', 'test-tol.R:125:3', 'test-tol.R:133:3', 126s 'test-tol.R:147:3', 'test-tol.R:152:3', 'test-tol.R:160:3', 126s 'test-tol.R:168:3', 'test-tol.R:176:3', 'test-tol.R:191:3', 126s 'test-tol.R:199:3', 'test-tol.R:211:3', 'test-tol.R:230:3', 126s 'test-tol.R:238:3', 'test-tol.R:250:3', 'test-tol.R:287:3', 126s 'test-tol.R:327:3', 'test-tol.R:335:3', 'test-tol.R:342:3', 126s 'test-tol.R:350:3', 'test-tol.R:361:3', 'test-tol.R:369:3', 126s 'test-tol.R:377:3', 'test-tol.R:390:3', 'test-tol.R:408:3', 126s 'test-tol.R:422:3', 'test-tol.R:431:3', 'test-tol.R:441:3', 126s 'test-tol.R:451:3', 'test-tol.R:461:3', 'test-tol.R:472:3', 126s 'test-tol.R:479:3', 'test-tol.R:492:3', 'test-tol.R:509:3', 126s 'test-tol.R:517:3', 'test-tol.R:524:3', 'test-tol.R:532:3', 126s 'test-tol.R:543:3', 'test-tol.R:551:3', 'test-tol.R:559:3' 126s 126s [ FAIL 0 | WARN 0 | SKIP 206 | PASS 37 ] 126s > 126s autopkgtest [17:33:53]: test run-unit-test: -----------------------] 126s autopkgtest [17:33:53]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 126s run-unit-test PASS 127s autopkgtest [17:33:54]: test pkg-r-autopkgtest: preparing testbed 127s Reading package lists... 127s Building dependency tree... 127s Reading state information... 127s Solving dependencies... 127s The following NEW packages will be installed: 127s build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu 127s dctrl-tools fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ 127s g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 127s gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15 127s gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 127s javascript-common libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev 127s libgcc-15-dev libgfortran-15-dev libhwasan0 libicu-dev libisl23 libitm1 127s libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libjs-bootstrap libjs-bootstrap4 127s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 127s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 127s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 127s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 127s liblapack-dev liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 127s libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpkgconf3 127s libpng-dev libquadmath0 libreadline-dev libstdc++-15-dev libtirpc-dev 127s libtsan2 libubsan1 libzstd-dev node-bootstrap-sass node-html5shiv 127s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 127s r-base-dev r-cran-ade4 r-cran-base64enc r-cran-bslib r-cran-cachem 127s r-cran-cellranger r-cran-commonmark r-cran-cpp11 r-cran-dplyr r-cran-fansi 127s r-cran-fastmap r-cran-fontawesome r-cran-generics r-cran-highr 127s r-cran-htmltools r-cran-httpuv r-cran-jquerylib r-cran-knitr r-cran-later 127s r-cran-mass r-cran-memoise r-cran-phylobase r-cran-pillar r-cran-pixmap 127s r-cran-plyr r-cran-promises r-cran-purrr r-cran-rappdirs 127s r-cran-rcpparmadillo r-cran-readxl r-cran-rematch r-cran-reshape2 127s r-cran-rmarkdown r-cran-rnexml r-cran-sass r-cran-shiny r-cran-sourcetools 127s r-cran-sp r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tidyr 127s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-uuid r-cran-xfun 127s r-cran-xml2 r-cran-xtable r-cran-yaml zlib1g-dev 127s 0 upgraded, 132 newly installed, 0 to remove and 0 not upgraded. 127s Need to get 181 MB of archives. 127s After this operation, 720 MB of additional disk space will be used. 127s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB] 127s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB] 128s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB] 128s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B] 128s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 128s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 128s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 15.2.0-12ubuntu1 [47.4 kB] 128s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 15.2.0-12ubuntu1 [29.5 kB] 128s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 15.2.0-12ubuntu1 [3070 kB] 128s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 15.2.0-12ubuntu1 [1360 kB] 129s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 15.2.0-12ubuntu1 [2757 kB] 129s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 15.2.0-12ubuntu1 [1210 kB] 129s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 15.2.0-12ubuntu1 [1685 kB] 129s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 15.2.0-12ubuntu1 [153 kB] 129s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB] 129s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB] 129s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB] 129s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 129s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 129s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB] 129s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB] 130s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB] 130s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 130s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 130s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B] 130s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB] 130s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 130s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 130s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 130s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB] 130s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB] 130s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB] 130s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B] 130s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B] 130s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB] 130s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1 [4828 B] 130s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB] 130s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB] 130s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2 [56.8 kB] 130s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB] 130s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu2 [296 kB] 130s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 130s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 130s Get:44 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 130s Get:45 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 130s Get:46 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 130s Get:47 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB] 130s Get:48 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 130s Get:49 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 130s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 130s Get:51 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 130s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 130s Get:53 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 130s Get:54 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 130s Get:55 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 130s Get:56 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 130s Get:57 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-2 [41.3 kB] 130s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB] 130s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB] 130s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB] 130s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB] 130s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB] 130s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B] 130s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB] 130s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB] 130s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB] 130s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB] 130s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB] 130s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-2 [376 kB] 130s Get:70 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 130s Get:71 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 130s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 130s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 130s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB] 131s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB] 131s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB] 131s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB] 131s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB] 131s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 131s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B] 131s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB] 131s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pixmap all 0.4-14-1 [217 kB] 131s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB] 131s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB] 131s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ade4 amd64 1.7-23-1 [5414 kB] 131s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB] 131s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 131s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 131s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 131s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 131s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 131s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB] 131s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 131s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 131s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rematch all 2.0.0-1 [18.3 kB] 131s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB] 131s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 131s Get:98 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 131s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 131s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cellranger all 1.1.0-3build1 [103 kB] 131s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB] 131s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB] 131s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB] 131s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 131s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 131s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 131s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB] 131s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 131s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 131s Get:110 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 131s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 131s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 131s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 132s Get:114 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 132s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] 132s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB] 132s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 132s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB] 132s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-uuid amd64 1.2-1-1 [48.5 kB] 132s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 132s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 132s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml2 amd64 1.4.1-1 [329 kB] 132s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rnexml all 2.4.11+ds-1 [744 kB] 132s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-phylobase amd64 0.8.12-1 [693 kB] 132s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-readxl amd64 1.4.5-1 [361 kB] 132s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB] 132s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 132s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 132s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 132s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 132s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 132s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 132s Fetched 181 MB in 5s (36.8 MB/s) 132s Selecting previously unselected package libisl23:amd64. 132s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 131493 files and directories currently installed.) 132s Preparing to unpack .../000-libisl23_0.27-1build1_amd64.deb ... 132s Unpacking libisl23:amd64 (0.27-1build1) ... 132s Selecting previously unselected package libmpc3:amd64. 132s Preparing to unpack .../001-libmpc3_1.3.1-2_amd64.deb ... 132s Unpacking libmpc3:amd64 (1.3.1-2) ... 132s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 132s Preparing to unpack .../002-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 132s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package cpp-15. 133s Preparing to unpack .../003-cpp-15_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package cpp-x86-64-linux-gnu. 133s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 133s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 133s Selecting previously unselected package cpp. 133s Preparing to unpack .../005-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ... 133s Unpacking cpp (4:15.2.0-4ubuntu1) ... 133s Selecting previously unselected package libcc1-0:amd64. 133s Preparing to unpack .../006-libcc1-0_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libcc1-0:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libitm1:amd64. 133s Preparing to unpack .../007-libitm1_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libitm1:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libasan8:amd64. 133s Preparing to unpack .../008-libasan8_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libasan8:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package liblsan0:amd64. 133s Preparing to unpack .../009-liblsan0_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking liblsan0:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libtsan2:amd64. 133s Preparing to unpack .../010-libtsan2_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libtsan2:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libubsan1:amd64. 133s Preparing to unpack .../011-libubsan1_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libubsan1:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libhwasan0:amd64. 133s Preparing to unpack .../012-libhwasan0_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libhwasan0:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libquadmath0:amd64. 133s Preparing to unpack .../013-libquadmath0_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libquadmath0:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libgcc-15-dev:amd64. 133s Preparing to unpack .../014-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package gcc-15-x86-64-linux-gnu. 133s Preparing to unpack .../015-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package gcc-15. 133s Preparing to unpack .../016-gcc-15_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package gcc-x86-64-linux-gnu. 133s Preparing to unpack .../017-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 133s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 133s Selecting previously unselected package gcc. 133s Preparing to unpack .../018-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ... 133s Unpacking gcc (4:15.2.0-4ubuntu1) ... 133s Selecting previously unselected package libstdc++-15-dev:amd64. 133s Preparing to unpack .../019-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package g++-15-x86-64-linux-gnu. 133s Preparing to unpack .../020-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 133s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package g++-15. 134s Preparing to unpack .../021-g++-15_15.2.0-12ubuntu1_amd64.deb ... 134s Unpacking g++-15 (15.2.0-12ubuntu1) ... 134s Selecting previously unselected package g++-x86-64-linux-gnu. 134s Preparing to unpack .../022-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 134s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 134s Selecting previously unselected package g++. 134s Preparing to unpack .../023-g++_4%3a15.2.0-4ubuntu1_amd64.deb ... 134s Unpacking g++ (4:15.2.0-4ubuntu1) ... 134s Selecting previously unselected package build-essential. 134s Preparing to unpack .../024-build-essential_12.12ubuntu2_amd64.deb ... 134s Unpacking build-essential (12.12ubuntu2) ... 134s Selecting previously unselected package dctrl-tools. 134s Preparing to unpack .../025-dctrl-tools_2.24-3build4_amd64.deb ... 134s Unpacking dctrl-tools (2.24-3build4) ... 134s Selecting previously unselected package fonts-font-awesome. 134s Preparing to unpack .../026-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 134s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 134s Selecting previously unselected package fonts-glyphicons-halflings. 134s Preparing to unpack .../027-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 134s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 134s Selecting previously unselected package fonts-mathjax. 134s Preparing to unpack .../028-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 134s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 134s Selecting previously unselected package libgfortran-15-dev:amd64. 134s Preparing to unpack .../029-libgfortran-15-dev_15.2.0-12ubuntu1_amd64.deb ... 134s Unpacking libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ... 134s Selecting previously unselected package gfortran-15-x86-64-linux-gnu. 134s Preparing to unpack .../030-gfortran-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 134s Unpacking gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 134s Selecting previously unselected package gfortran-15. 134s Preparing to unpack .../031-gfortran-15_15.2.0-12ubuntu1_amd64.deb ... 134s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 134s Selecting previously unselected package gfortran-x86-64-linux-gnu. 134s Preparing to unpack .../032-gfortran-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 134s Unpacking gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 134s Selecting previously unselected package gfortran. 134s Preparing to unpack .../033-gfortran_4%3a15.2.0-4ubuntu1_amd64.deb ... 134s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 134s Selecting previously unselected package icu-devtools. 134s Preparing to unpack .../034-icu-devtools_78.2-1ubuntu1_amd64.deb ... 134s Unpacking icu-devtools (78.2-1ubuntu1) ... 134s Selecting previously unselected package javascript-common. 134s Preparing to unpack .../035-javascript-common_12+nmu1_all.deb ... 134s Unpacking javascript-common (12+nmu1) ... 134s Selecting previously unselected package libblas-dev:amd64. 134s Preparing to unpack .../036-libblas-dev_3.12.1-7ubuntu1_amd64.deb ... 134s Unpacking libblas-dev:amd64 (3.12.1-7ubuntu1) ... 134s Selecting previously unselected package libbz2-dev:amd64. 134s Preparing to unpack .../037-libbz2-dev_1.0.8-6build2_amd64.deb ... 134s Unpacking libbz2-dev:amd64 (1.0.8-6build2) ... 134s Selecting previously unselected package libdeflate-dev:amd64. 134s Preparing to unpack .../038-libdeflate-dev_1.23-2_amd64.deb ... 134s Unpacking libdeflate-dev:amd64 (1.23-2) ... 134s Selecting previously unselected package libicu-dev:amd64. 134s Preparing to unpack .../039-libicu-dev_78.2-1ubuntu1_amd64.deb ... 134s Unpacking libicu-dev:amd64 (78.2-1ubuntu1) ... 134s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 134s Preparing to unpack .../040-libjpeg-turbo8-dev_2.1.5-4ubuntu2_amd64.deb ... 134s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu2) ... 134s Selecting previously unselected package libjpeg8-dev:amd64. 134s Preparing to unpack .../041-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 134s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 134s Selecting previously unselected package libjpeg-dev:amd64. 134s Preparing to unpack .../042-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 134s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 134s Selecting previously unselected package libjs-bootstrap. 134s Preparing to unpack .../043-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 134s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 134s Selecting previously unselected package libjs-popper.js. 134s Preparing to unpack .../044-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 134s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 134s Selecting previously unselected package libjs-bootstrap4. 134s Preparing to unpack .../045-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 134s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 134s Selecting previously unselected package libjs-d3. 134s Preparing to unpack .../046-libjs-d3_3.5.17-4build1_all.deb ... 134s Unpacking libjs-d3 (3.5.17-4build1) ... 134s Selecting previously unselected package libjs-es5-shim. 134s Preparing to unpack .../047-libjs-es5-shim_4.6.7-2_all.deb ... 134s Unpacking libjs-es5-shim (4.6.7-2) ... 134s Selecting previously unselected package libjs-highlight.js. 134s Preparing to unpack .../048-libjs-highlight.js_10.7.3+dfsg-2_all.deb ... 134s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ... 134s Selecting previously unselected package libjs-jquery. 134s Preparing to unpack .../049-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 134s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 134s Selecting previously unselected package libjs-jquery-datatables. 134s Preparing to unpack .../050-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 134s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 134s Selecting previously unselected package libjs-sifter.js. 134s Preparing to unpack .../051-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 134s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 134s Selecting previously unselected package libjs-microplugin.js. 134s Preparing to unpack .../052-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ... 134s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ... 134s Selecting previously unselected package libjs-jquery-selectize.js. 134s Preparing to unpack .../053-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 134s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 134s Selecting previously unselected package libjs-jquery-ui. 134s Preparing to unpack .../054-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 134s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 134s Selecting previously unselected package libjs-json. 134s Preparing to unpack .../055-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 134s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 134s Selecting previously unselected package libjs-prettify. 134s Preparing to unpack .../056-libjs-prettify_2015.12.04+dfsg-2_all.deb ... 134s Unpacking libjs-prettify (2015.12.04+dfsg-2) ... 134s Selecting previously unselected package liblapack-dev:amd64. 134s Preparing to unpack .../057-liblapack-dev_3.12.1-7ubuntu1_amd64.deb ... 134s Unpacking liblapack-dev:amd64 (3.12.1-7ubuntu1) ... 135s Selecting previously unselected package liblua5.4-0:amd64. 135s Preparing to unpack .../058-liblua5.4-0_5.4.8-1_amd64.deb ... 135s Unpacking liblua5.4-0:amd64 (5.4.8-1) ... 135s Selecting previously unselected package libncurses-dev:amd64. 135s Preparing to unpack .../059-libncurses-dev_6.6+20251231-1_amd64.deb ... 135s Unpacking libncurses-dev:amd64 (6.6+20251231-1) ... 135s Selecting previously unselected package libpcre2-16-0:amd64. 135s Preparing to unpack .../060-libpcre2-16-0_10.46-1_amd64.deb ... 135s Unpacking libpcre2-16-0:amd64 (10.46-1) ... 135s Selecting previously unselected package libpcre2-32-0:amd64. 135s Preparing to unpack .../061-libpcre2-32-0_10.46-1_amd64.deb ... 135s Unpacking libpcre2-32-0:amd64 (10.46-1) ... 135s Selecting previously unselected package libpcre2-posix3:amd64. 135s Preparing to unpack .../062-libpcre2-posix3_10.46-1_amd64.deb ... 135s Unpacking libpcre2-posix3:amd64 (10.46-1) ... 135s Selecting previously unselected package libpcre2-dev:amd64. 135s Preparing to unpack .../063-libpcre2-dev_10.46-1_amd64.deb ... 135s Unpacking libpcre2-dev:amd64 (10.46-1) ... 135s Selecting previously unselected package libpkgconf3:amd64. 135s Preparing to unpack .../064-libpkgconf3_1.8.1-4build1_amd64.deb ... 135s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ... 135s Selecting previously unselected package zlib1g-dev:amd64. 135s Preparing to unpack .../065-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ... 135s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 135s Selecting previously unselected package libpng-dev:amd64. 135s Preparing to unpack .../066-libpng-dev_1.6.54-1_amd64.deb ... 135s Unpacking libpng-dev:amd64 (1.6.54-1) ... 135s Selecting previously unselected package libreadline-dev:amd64. 135s Preparing to unpack .../067-libreadline-dev_8.3-3_amd64.deb ... 135s Unpacking libreadline-dev:amd64 (8.3-3) ... 135s Selecting previously unselected package libzstd-dev:amd64. 135s Preparing to unpack .../068-libzstd-dev_1.5.7+dfsg-2_amd64.deb ... 135s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-2) ... 135s Selecting previously unselected package node-bootstrap-sass. 135s Preparing to unpack .../069-node-bootstrap-sass_3.4.3-2_all.deb ... 135s Unpacking node-bootstrap-sass (3.4.3-2) ... 135s Selecting previously unselected package node-html5shiv. 135s Preparing to unpack .../070-node-html5shiv_3.7.3+dfsg-5_all.deb ... 135s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 135s Selecting previously unselected package node-normalize.css. 135s Preparing to unpack .../071-node-normalize.css_8.0.1-5.1_all.deb ... 135s Unpacking node-normalize.css (8.0.1-5.1) ... 135s Selecting previously unselected package pandoc-data. 135s Preparing to unpack .../072-pandoc-data_3.1.11.1-3build1_all.deb ... 135s Unpacking pandoc-data (3.1.11.1-3build1) ... 135s Selecting previously unselected package pandoc. 135s Preparing to unpack .../073-pandoc_3.1.11.1+ds-4_amd64.deb ... 135s Unpacking pandoc (3.1.11.1+ds-4) ... 135s Selecting previously unselected package liblzma-dev:amd64. 135s Preparing to unpack .../074-liblzma-dev_5.8.2-2_amd64.deb ... 135s Unpacking liblzma-dev:amd64 (5.8.2-2) ... 135s Selecting previously unselected package pkgconf-bin. 135s Preparing to unpack .../075-pkgconf-bin_1.8.1-4build1_amd64.deb ... 135s Unpacking pkgconf-bin (1.8.1-4build1) ... 135s Selecting previously unselected package pkgconf:amd64. 135s Preparing to unpack .../076-pkgconf_1.8.1-4build1_amd64.deb ... 135s Unpacking pkgconf:amd64 (1.8.1-4build1) ... 135s Selecting previously unselected package libtirpc-dev:amd64. 135s Preparing to unpack .../077-libtirpc-dev_1.3.6+ds-1_amd64.deb ... 135s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ... 135s Selecting previously unselected package r-base-dev. 135s Preparing to unpack .../078-r-base-dev_4.5.2-1ubuntu2_all.deb ... 135s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 135s Selecting previously unselected package pkg-r-autopkgtest. 135s Preparing to unpack .../079-pkg-r-autopkgtest_20250812_all.deb ... 135s Unpacking pkg-r-autopkgtest (20250812) ... 135s Selecting previously unselected package r-cran-mass. 135s Preparing to unpack .../080-r-cran-mass_7.3-65-1_amd64.deb ... 135s Unpacking r-cran-mass (7.3-65-1) ... 135s Selecting previously unselected package r-cran-pixmap. 135s Preparing to unpack .../081-r-cran-pixmap_0.4-14-1_all.deb ... 135s Unpacking r-cran-pixmap (0.4-14-1) ... 135s Selecting previously unselected package r-cran-sp. 135s Preparing to unpack .../082-r-cran-sp_1%3a2.2-0+dfsg-1_amd64.deb ... 135s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 135s Selecting previously unselected package r-cran-rcpparmadillo. 135s Preparing to unpack .../083-r-cran-rcpparmadillo_15.2.3-1-1_amd64.deb ... 135s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ... 136s Selecting previously unselected package r-cran-ade4. 136s Preparing to unpack .../084-r-cran-ade4_1.7-23-1_amd64.deb ... 136s Unpacking r-cran-ade4 (1.7-23-1) ... 136s Selecting previously unselected package r-cran-base64enc. 136s Preparing to unpack .../085-r-cran-base64enc_0.1-3-3build1_amd64.deb ... 136s Unpacking r-cran-base64enc (0.1-3-3build1) ... 136s Selecting previously unselected package r-cran-fastmap. 136s Preparing to unpack .../086-r-cran-fastmap_1.2.0-1_amd64.deb ... 136s Unpacking r-cran-fastmap (1.2.0-1) ... 136s Selecting previously unselected package r-cran-cachem. 136s Preparing to unpack .../087-r-cran-cachem_1.1.0-1_amd64.deb ... 136s Unpacking r-cran-cachem (1.1.0-1) ... 136s Selecting previously unselected package r-cran-htmltools. 136s Preparing to unpack .../088-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 136s Unpacking r-cran-htmltools (0.5.8.1-1) ... 136s Selecting previously unselected package r-cran-jquerylib. 136s Preparing to unpack .../089-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 136s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 136s Selecting previously unselected package r-cran-memoise. 136s Preparing to unpack .../090-r-cran-memoise_2.0.1-1build1_all.deb ... 136s Unpacking r-cran-memoise (2.0.1-1build1) ... 136s Selecting previously unselected package r-cran-rappdirs. 136s Preparing to unpack .../091-r-cran-rappdirs_0.3.3-1build1_amd64.deb ... 136s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 136s Selecting previously unselected package r-cran-sass. 136s Preparing to unpack .../092-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 136s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 136s Selecting previously unselected package r-cran-bslib. 136s Preparing to unpack .../093-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 136s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 136s Selecting previously unselected package r-cran-rematch. 136s Preparing to unpack .../094-r-cran-rematch_2.0.0-1_all.deb ... 136s Unpacking r-cran-rematch (2.0.0-1) ... 136s Selecting previously unselected package r-cran-fansi. 136s Preparing to unpack .../095-r-cran-fansi_1.0.6-2_amd64.deb ... 136s Unpacking r-cran-fansi (1.0.6-2) ... 136s Selecting previously unselected package r-cran-utf8. 136s Preparing to unpack .../096-r-cran-utf8_1.2.4-1_amd64.deb ... 136s Unpacking r-cran-utf8 (1.2.4-1) ... 136s Selecting previously unselected package r-cran-pillar. 136s Preparing to unpack .../097-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 136s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 136s Selecting previously unselected package r-cran-tibble. 136s Preparing to unpack .../098-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 136s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 136s Selecting previously unselected package r-cran-cellranger. 136s Preparing to unpack .../099-r-cran-cellranger_1.1.0-3build1_all.deb ... 136s Unpacking r-cran-cellranger (1.1.0-3build1) ... 136s Selecting previously unselected package r-cran-commonmark. 136s Preparing to unpack .../100-r-cran-commonmark_1.9.5-1_amd64.deb ... 136s Unpacking r-cran-commonmark (1.9.5-1) ... 136s Selecting previously unselected package r-cran-cpp11. 136s Preparing to unpack .../101-r-cran-cpp11_0.5.3-1_all.deb ... 136s Unpacking r-cran-cpp11 (0.5.3-1) ... 136s Selecting previously unselected package r-cran-generics. 136s Preparing to unpack .../102-r-cran-generics_0.1.4-1_all.deb ... 136s Unpacking r-cran-generics (0.1.4-1) ... 136s Selecting previously unselected package r-cran-tidyselect. 136s Preparing to unpack .../103-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 136s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 136s Selecting previously unselected package r-cran-dplyr. 136s Preparing to unpack .../104-r-cran-dplyr_1.1.4-4_amd64.deb ... 136s Unpacking r-cran-dplyr (1.1.4-4) ... 136s Selecting previously unselected package r-cran-fontawesome. 136s Preparing to unpack .../105-r-cran-fontawesome_0.5.3-1_all.deb ... 136s Unpacking r-cran-fontawesome (0.5.3-1) ... 136s Selecting previously unselected package r-cran-xfun. 136s Preparing to unpack .../106-r-cran-xfun_0.55+dfsg-1_amd64.deb ... 136s Unpacking r-cran-xfun (0.55+dfsg-1) ... 136s Selecting previously unselected package r-cran-highr. 136s Preparing to unpack .../107-r-cran-highr_0.11+dfsg-1_all.deb ... 136s Unpacking r-cran-highr (0.11+dfsg-1) ... 136s Selecting previously unselected package r-cran-later. 136s Preparing to unpack .../108-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 136s Unpacking r-cran-later (1.4.1+dfsg-1) ... 136s Selecting previously unselected package r-cran-promises. 136s Preparing to unpack .../109-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 136s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 136s Selecting previously unselected package r-cran-httpuv. 136s Preparing to unpack .../110-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 136s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 136s Selecting previously unselected package r-cran-yaml. 136s Preparing to unpack .../111-r-cran-yaml_2.3.10-1_amd64.deb ... 136s Unpacking r-cran-yaml (2.3.10-1) ... 136s Selecting previously unselected package libjs-mathjax. 136s Preparing to unpack .../112-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 136s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 136s Selecting previously unselected package r-cran-knitr. 136s Preparing to unpack .../113-r-cran-knitr_1.51+dfsg-1_all.deb ... 136s Unpacking r-cran-knitr (1.51+dfsg-1) ... 136s Selecting previously unselected package r-cran-plyr. 136s Preparing to unpack .../114-r-cran-plyr_1.8.9-1_amd64.deb ... 136s Unpacking r-cran-plyr (1.8.9-1) ... 136s Selecting previously unselected package r-cran-stringi. 136s Preparing to unpack .../115-r-cran-stringi_1.8.4-1build2_amd64.deb ... 136s Unpacking r-cran-stringi (1.8.4-1build2) ... 136s Selecting previously unselected package r-cran-stringr. 136s Preparing to unpack .../116-r-cran-stringr_1.5.1-1_all.deb ... 136s Unpacking r-cran-stringr (1.5.1-1) ... 136s Selecting previously unselected package r-cran-reshape2. 136s Preparing to unpack .../117-r-cran-reshape2_1.4.4-2build2_amd64.deb ... 136s Unpacking r-cran-reshape2 (1.4.4-2build2) ... 136s Selecting previously unselected package r-cran-uuid. 136s Preparing to unpack .../118-r-cran-uuid_1.2-1-1_amd64.deb ... 136s Unpacking r-cran-uuid (1.2-1-1) ... 136s Selecting previously unselected package r-cran-purrr. 136s Preparing to unpack .../119-r-cran-purrr_1.0.4-1_amd64.deb ... 136s Unpacking r-cran-purrr (1.0.4-1) ... 136s Selecting previously unselected package r-cran-tidyr. 136s Preparing to unpack .../120-r-cran-tidyr_1.3.1-1_amd64.deb ... 136s Unpacking r-cran-tidyr (1.3.1-1) ... 136s Selecting previously unselected package r-cran-xml2. 136s Preparing to unpack .../121-r-cran-xml2_1.4.1-1_amd64.deb ... 136s Unpacking r-cran-xml2 (1.4.1-1) ... 136s Selecting previously unselected package r-cran-rnexml. 136s Preparing to unpack .../122-r-cran-rnexml_2.4.11+ds-1_all.deb ... 136s Unpacking r-cran-rnexml (2.4.11+ds-1) ... 136s Selecting previously unselected package r-cran-phylobase. 136s Preparing to unpack .../123-r-cran-phylobase_0.8.12-1_amd64.deb ... 136s Unpacking r-cran-phylobase (0.8.12-1) ... 136s Selecting previously unselected package r-cran-readxl. 137s Preparing to unpack .../124-r-cran-readxl_1.4.5-1_amd64.deb ... 137s Unpacking r-cran-readxl (1.4.5-1) ... 137s Selecting previously unselected package r-cran-tinytex. 137s Preparing to unpack .../125-r-cran-tinytex_0.58-1_all.deb ... 137s Unpacking r-cran-tinytex (0.58-1) ... 137s Selecting previously unselected package libjs-modernizr. 137s Preparing to unpack .../126-libjs-modernizr_3.13.0-0.1build1_all.deb ... 137s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 137s Selecting previously unselected package r-cran-xtable. 137s Preparing to unpack .../127-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 137s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 137s Selecting previously unselected package r-cran-sourcetools. 137s Preparing to unpack .../128-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 137s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 137s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 137s Preparing to unpack .../129-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 137s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 137s Selecting previously unselected package r-cran-shiny. 137s Preparing to unpack .../130-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 137s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 137s Selecting previously unselected package r-cran-rmarkdown. 137s Preparing to unpack .../131-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 137s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 137s Setting up libjs-json (0~20221030+~1.0.8-1build1) ... 137s Setting up javascript-common (12+nmu1) ... 137s Setting up r-cran-rematch (2.0.0-1) ... 137s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu2) ... 137s Setting up libncurses-dev:amd64 (6.6+20251231-1) ... 137s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ... 137s Setting up libzstd-dev:amd64 (1.5.7+dfsg-2) ... 137s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ... 137s Setting up libjs-popper.js (1.16.1+ds-6build1) ... 137s Setting up r-cran-uuid (1.2-1-1) ... 137s Setting up r-cran-xfun (0.55+dfsg-1) ... 137s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 137s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 137s Setting up r-cran-generics (0.1.4-1) ... 137s Setting up r-cran-base64enc (0.1-3-3build1) ... 137s Setting up r-cran-yaml (2.3.10-1) ... 137s Setting up node-html5shiv (3.7.3+dfsg-5) ... 137s Setting up r-cran-fansi (1.0.6-2) ... 137s Setting up r-cran-mass (7.3-65-1) ... 137s Setting up libjs-microplugin.js (0.0.3+dfsg-2) ... 137s Setting up libreadline-dev:amd64 (8.3-3) ... 137s Setting up libjs-modernizr (3.13.0-0.1build1) ... 137s Setting up r-cran-xtable (1:1.8-4-2build1) ... 137s Setting up libpcre2-16-0:amd64 (10.46-1) ... 137s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 137s Setting up libjs-es5-shim (4.6.7-2) ... 137s Setting up r-cran-fastmap (1.2.0-1) ... 137s Setting up libpcre2-32-0:amd64 (10.46-1) ... 137s Setting up r-cran-sp (1:2.2-0+dfsg-1) ... 137s Setting up r-cran-utf8 (1.2.4-1) ... 137s Setting up libtirpc-dev:amd64 (1.3.6+ds-1) ... 137s Setting up libpkgconf3:amd64 (1.8.1-4build1) ... 137s Setting up r-cran-stringi (1.8.4-1build2) ... 137s Setting up r-cran-cpp11 (0.5.3-1) ... 137s Setting up r-cran-plyr (1.8.9-1) ... 137s Setting up libquadmath0:amd64 (15.2.0-12ubuntu1) ... 137s Setting up libjs-d3 (3.5.17-4build1) ... 137s Setting up libmpc3:amd64 (1.3.1-2) ... 137s Setting up r-cran-purrr (1.0.4-1) ... 137s Setting up icu-devtools (78.2-1ubuntu1) ... 137s Setting up r-cran-sourcetools (0.1.7-1-1) ... 137s Setting up pkgconf-bin (1.8.1-4build1) ... 137s Setting up r-cran-later (1.4.1+dfsg-1) ... 137s Setting up r-cran-htmltools (0.5.8.1-1) ... 137s Setting up r-cran-tinytex (0.58-1) ... 137s Setting up liblzma-dev:amd64 (5.8.2-2) ... 137s Setting up libubsan1:amd64 (15.2.0-12ubuntu1) ... 137s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 137s Setting up libpcre2-posix3:amd64 (10.46-1) ... 137s Setting up libjs-highlight.js (10.7.3+dfsg-2) ... 137s Setting up libhwasan0:amd64 (15.2.0-12ubuntu1) ... 137s Setting up r-cran-pixmap (0.4-14-1) ... 137s Setting up libasan8:amd64 (15.2.0-12ubuntu1) ... 137s Setting up r-cran-cachem (1.1.0-1) ... 137s Setting up liblua5.4-0:amd64 (5.4.8-1) ... 137s Setting up node-bootstrap-sass (3.4.3-2) ... 137s Setting up r-cran-rcpparmadillo (15.2.3-1-1) ... 137s Setting up libjs-prettify (2015.12.04+dfsg-2) ... 137s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ... 137s Setting up r-cran-commonmark (1.9.5-1) ... 137s Setting up pandoc-data (3.1.11.1-3build1) ... 137s Setting up libtsan2:amd64 (15.2.0-12ubuntu1) ... 137s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 137s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 137s Setting up libisl23:amd64 (0.27-1build1) ... 137s Setting up libdeflate-dev:amd64 (1.23-2) ... 137s Setting up node-normalize.css (8.0.1-5.1) ... 137s Setting up libicu-dev:amd64 (78.2-1ubuntu1) ... 137s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 137s Setting up libcc1-0:amd64 (15.2.0-12ubuntu1) ... 137s Setting up r-cran-rappdirs (0.3.3-1build1) ... 137s Setting up liblsan0:amd64 (15.2.0-12ubuntu1) ... 137s Setting up libblas-dev:amd64 (3.12.1-7ubuntu1) ... 137s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 137s Setting up dctrl-tools (2.24-3build4) ... 137s Setting up libjs-bootstrap (3.4.1+dfsg-6) ... 137s Setting up libitm1:amd64 (15.2.0-12ubuntu1) ... 137s Setting up libbz2-dev:amd64 (1.0.8-6build2) ... 137s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 137s Setting up r-cran-pillar (1.11.1+dfsg-1) ... 137s Setting up libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ... 137s Setting up r-cran-stringr (1.5.1-1) ... 137s Setting up libpcre2-dev:amd64 (10.46-1) ... 137s Setting up r-cran-xml2 (1.4.1-1) ... 137s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 137s Setting up libpng-dev:amd64 (1.6.54-1) ... 137s Setting up r-cran-highr (0.11+dfsg-1) ... 137s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 137s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 137s Setting up r-cran-fontawesome (0.5.3-1) ... 137s Setting up cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 137s Setting up r-cran-ade4 (1.7-23-1) ... 137s Setting up libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ... 137s Setting up libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 137s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ... 137s Setting up pkgconf:amd64 (1.8.1-4build1) ... 137s Setting up gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 137s Setting up r-cran-reshape2 (1.4.4-2build2) ... 137s Setting up libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ... 137s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ... 137s Setting up pandoc (3.1.11.1+ds-4) ... 137s Setting up r-cran-memoise (2.0.1-1build1) ... 137s Setting up liblapack-dev:amd64 (3.12.1-7ubuntu1) ... 137s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 137s Setting up r-cran-promises (1.3.2+dfsg-1) ... 137s Setting up r-cran-knitr (1.51+dfsg-1) ... 137s Setting up cpp-15 (15.2.0-12ubuntu1) ... 137s Setting up r-cran-sass (0.4.9+dfsg-1) ... 137s Setting up r-cran-dplyr (1.1.4-4) ... 137s Setting up cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 137s Setting up gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 137s Setting up g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 137s Setting up gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 137s Setting up r-cran-cellranger (1.1.0-3build1) ... 137s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 137s Setting up gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 137s Setting up gcc-15 (15.2.0-12ubuntu1) ... 137s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 137s Setting up r-cran-tidyr (1.3.1-1) ... 137s Setting up r-cran-rnexml (2.4.11+ds-1) ... 137s Setting up cpp (4:15.2.0-4ubuntu1) ... 137s Setting up g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 137s Setting up r-cran-phylobase (0.8.12-1) ... 137s Setting up g++-15 (15.2.0-12ubuntu1) ... 137s Setting up gfortran-15 (15.2.0-12ubuntu1) ... 137s Setting up r-cran-readxl (1.4.5-1) ... 137s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 137s Setting up gcc (4:15.2.0-4ubuntu1) ... 137s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 137s Setting up g++ (4:15.2.0-4ubuntu1) ... 137s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 137s Setting up build-essential (12.12ubuntu2) ... 137s Setting up gfortran (4:15.2.0-4ubuntu1) ... 137s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 137s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 137s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 137s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 137s Setting up r-base-dev (4.5.2-1ubuntu2) ... 137s Setting up pkg-r-autopkgtest (20250812) ... 137s Processing triggers for fontconfig (2.17.1-3ubuntu1) ... 137s Processing triggers for libc-bin (2.42-2ubuntu4) ... 137s Processing triggers for man-db (2.13.1-1) ... 138s Processing triggers for install-info (7.2-5) ... 139s autopkgtest [17:34:06]: test environment configured for cross building 139s autopkgtest [17:34:06]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 139s autopkgtest [17:34:06]: test pkg-r-autopkgtest: [----------------------- 139s Test: Try to load the R library rotl 139s 139s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 139s Copyright (C) 2025 The R Foundation for Statistical Computing 139s Platform: x86_64-pc-linux-gnu 139s 139s R is free software and comes with ABSOLUTELY NO WARRANTY. 139s You are welcome to redistribute it under certain conditions. 139s Type 'license()' or 'licence()' for distribution details. 139s 139s R is a collaborative project with many contributors. 139s Type 'contributors()' for more information and 139s 'citation()' on how to cite R or R packages in publications. 139s 139s Type 'demo()' for some demos, 'help()' for on-line help, or 139s 'help.start()' for an HTML browser interface to help. 139s Type 'q()' to quit R. 139s 139s > library('rotl') 139s > 139s autopkgtest [17:34:06]: test pkg-r-autopkgtest: -----------------------] 140s autopkgtest [17:34:07]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 140s pkg-r-autopkgtest PASS 140s autopkgtest [17:34:07]: @@@@@@@@@@@@@@@@@@@@ summary 140s run-unit-test PASS 140s pkg-r-autopkgtest PASS