0s autopkgtest [10:23:51]: starting date and time: 2025-11-17 10:23:51+0000 0s autopkgtest [10:23:51]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [10:23:51]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.68dl47nu/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade h5sparse --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.13.7-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-2.secgroup --name adt-resolute-i386-h5sparse-20251117-102351-juju-7f2275-prod-proposed-migration-environment-15-f400d369-881e-4cd1-b7f7-010696937877 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-i386-h5sparse-20251117-102351-juju-7f2275-prod-proposed-migration-environment-15-f400d369-881e-4cd1-b7f7-010696937877 from image adt/ubuntu-resolute-amd64-server-20251117.img (UUID 9762b0cc-7c5b-4854-acd5-cc74ad0de8c6)... 50s autopkgtest [10:24:41]: testbed dpkg architecture: amd64 50s autopkgtest [10:24:41]: testbed apt version: 3.1.11 51s autopkgtest [10:24:42]: @@@@@@@@@@@@@@@@@@@@ test bed setup 51s autopkgtest [10:24:42]: testbed release detected to be: None 51s autopkgtest [10:24:42]: updating testbed package index (apt update) 52s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 52s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 52s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 52s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 52s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 52s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [881 kB] 52s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [80.3 kB] 52s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 52s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [118 kB] 52s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [158 kB] 52s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3128 B] 52s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 52s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 52s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 52s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [614 kB] 52s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [282 kB] 52s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [22.2 kB] 53s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [6516 B] 53s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [13.4 kB] 53s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [680 B] 54s Fetched 2367 kB in 1s (2140 kB/s) 55s Reading package lists... 55s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 55s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 55s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 55s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 56s Reading package lists... 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Calculating upgrade... 57s The following packages will be upgraded: 57s libpython3-stdlib python3 python3-minimal usbutils 57s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Need to get 146 kB of archives. 57s After this operation, 0 B of additional disk space will be used. 57s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 57s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 57s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 57s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 usbutils amd64 1:019-1 [83.9 kB] 57s dpkg-preconfigure: unable to re-open stdin: No such file or directory 57s Fetched 146 kB in 0s (0 B/s) 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 57s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 57s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 57s Setting up python3-minimal (3.13.7-2) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 57s Preparing to unpack .../python3_3.13.7-2_amd64.deb ... 57s running python pre-rtupdate hooks for python3.13... 57s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 57s Preparing to unpack .../libpython3-stdlib_3.13.7-2_amd64.deb ... 57s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 57s Preparing to unpack .../usbutils_1%3a019-1_amd64.deb ... 57s Unpacking usbutils (1:019-1) over (1:018-2) ... 57s Setting up usbutils (1:019-1) ... 57s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 57s Setting up python3 (3.13.7-2) ... 57s running python rtupdate hooks for python3.13... 57s running python post-rtupdate hooks for python3.13... 58s Processing triggers for man-db (2.13.1-1) ... 58s autopkgtest [10:24:49]: upgrading testbed (apt dist-upgrade and autopurge) 58s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s Calculating upgrade... 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s Solving dependencies... 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 62s autopkgtest [10:24:53]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:00:33 UTC 2025 62s autopkgtest [10:24:53]: @@@@@@@@@@@@@@@@@@@@ apt-source h5sparse 63s Get:1 http://ftpmaster.internal/ubuntu resolute/universe h5sparse 0.1.0-8 (dsc) [2174 B] 63s Get:2 http://ftpmaster.internal/ubuntu resolute/universe h5sparse 0.1.0-8 (tar) [10.5 kB] 63s Get:3 http://ftpmaster.internal/ubuntu resolute/universe h5sparse 0.1.0-8 (diff) [4420 B] 63s gpgv: Signature made Thu Jan 16 20:35:49 2025 UTC 63s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 63s gpgv: issuer "tchet@debian.org" 63s gpgv: Can't check signature: No public key 63s dpkg-source: warning: cannot verify inline signature for ./h5sparse_0.1.0-8.dsc: no acceptable signature found 63s autopkgtest [10:24:54]: testing package h5sparse version 0.1.0-8 63s autopkgtest [10:24:54]: build not needed 64s autopkgtest [10:24:55]: test run-unit-test: preparing testbed 64s Reading package lists... 64s Building dependency tree... 64s Reading state information... 64s Solving dependencies... 64s The following NEW packages will be installed: 64s libaec0 libblas3 libgfortran5 libhdf5-310 libhdf5-hl-310 liblapack3 liblzf1 64s libpython3.14-minimal libpython3.14-stdlib libsz2 python3-all 64s python3-decorator python3-h5py python3-h5py-serial python3-h5sparse 64s python3-iniconfig python3-numpy python3-numpy-dev python3-pluggy 64s python3-pytest python3-scipy python3.14 python3.14-minimal 64s 0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded. 64s Need to get 39.4 MB of archives. 64s After this operation, 192 MB of additional disk space will be used. 64s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1ubuntu1 [147 kB] 64s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 64s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 64s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 64s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy amd64 1:2.2.4+ds-1ubuntu1 [5377 kB] 65s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.0-4 [906 kB] 65s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-minimal amd64 3.14.0-4 [2559 kB] 65s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 65s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 65s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 65s Get:11 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 65s Get:12 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 65s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.0-4 [2397 kB] 65s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14 amd64 3.14.0-4 [805 kB] 65s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-all amd64 3.13.7-2 [890 B] 65s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 65s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 65s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 65s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.15.3-1ubuntu1 [20.3 MB] 66s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5sparse all 0.1.0-8 [6866 B] 66s Get:21 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-iniconfig all 2.1.0-1 [6840 B] 66s Get:22 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pluggy all 1.6.0-1 [21.0 kB] 66s Get:23 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pytest all 8.3.5-2 [252 kB] 66s Fetched 39.4 MB in 2s (19.3 MB/s) 66s Selecting previously unselected package python3-numpy-dev:amd64. 66s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 66s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 66s Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 66s Selecting previously unselected package libblas3:amd64. 66s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 66s Unpacking libblas3:amd64 (3.12.1-7) ... 66s Selecting previously unselected package libgfortran5:amd64. 66s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 66s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 66s Selecting previously unselected package liblapack3:amd64. 66s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 66s Unpacking liblapack3:amd64 (3.12.1-7) ... 66s Selecting previously unselected package python3-numpy. 66s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 66s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 66s Selecting previously unselected package libpython3.14-minimal:amd64. 66s Preparing to unpack .../05-libpython3.14-minimal_3.14.0-4_amd64.deb ... 66s Unpacking libpython3.14-minimal:amd64 (3.14.0-4) ... 67s Selecting previously unselected package python3.14-minimal. 67s Preparing to unpack .../06-python3.14-minimal_3.14.0-4_amd64.deb ... 67s Unpacking python3.14-minimal (3.14.0-4) ... 67s Selecting previously unselected package libaec0:amd64. 67s Preparing to unpack .../07-libaec0_1.1.4-2_amd64.deb ... 67s Unpacking libaec0:amd64 (1.1.4-2) ... 67s Selecting previously unselected package libsz2:amd64. 67s Preparing to unpack .../08-libsz2_1.1.4-2_amd64.deb ... 67s Unpacking libsz2:amd64 (1.1.4-2) ... 67s Selecting previously unselected package libhdf5-310:amd64. 67s Preparing to unpack .../09-libhdf5-310_1.14.5+repack-4_amd64.deb ... 67s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 67s Selecting previously unselected package libhdf5-hl-310:amd64. 67s Preparing to unpack .../10-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 67s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 67s Selecting previously unselected package liblzf1:amd64. 67s Preparing to unpack .../11-liblzf1_3.6-4_amd64.deb ... 67s Unpacking liblzf1:amd64 (3.6-4) ... 67s Selecting previously unselected package libpython3.14-stdlib:amd64. 67s Preparing to unpack .../12-libpython3.14-stdlib_3.14.0-4_amd64.deb ... 67s Unpacking libpython3.14-stdlib:amd64 (3.14.0-4) ... 67s Selecting previously unselected package python3.14. 67s Preparing to unpack .../13-python3.14_3.14.0-4_amd64.deb ... 67s Unpacking python3.14 (3.14.0-4) ... 67s Selecting previously unselected package python3-all. 67s Preparing to unpack .../14-python3-all_3.13.7-2_amd64.deb ... 67s Unpacking python3-all (3.13.7-2) ... 67s Selecting previously unselected package python3-decorator. 67s Preparing to unpack .../15-python3-decorator_5.2.1-2_all.deb ... 67s Unpacking python3-decorator (5.2.1-2) ... 67s Selecting previously unselected package python3-h5py-serial. 67s Preparing to unpack .../16-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 67s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 67s Selecting previously unselected package python3-h5py. 67s Preparing to unpack .../17-python3-h5py_3.13.0-1ubuntu1_all.deb ... 67s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 67s Selecting previously unselected package python3-scipy. 67s Preparing to unpack .../18-python3-scipy_1.15.3-1ubuntu1_amd64.deb ... 67s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 67s Selecting previously unselected package python3-h5sparse. 67s Preparing to unpack .../19-python3-h5sparse_0.1.0-8_all.deb ... 67s Unpacking python3-h5sparse (0.1.0-8) ... 67s Selecting previously unselected package python3-iniconfig. 67s Preparing to unpack .../20-python3-iniconfig_2.1.0-1_all.deb ... 67s Unpacking python3-iniconfig (2.1.0-1) ... 67s Selecting previously unselected package python3-pluggy. 67s Preparing to unpack .../21-python3-pluggy_1.6.0-1_all.deb ... 67s Unpacking python3-pluggy (1.6.0-1) ... 67s Selecting previously unselected package python3-pytest. 67s Preparing to unpack .../22-python3-pytest_8.3.5-2_all.deb ... 67s Unpacking python3-pytest (8.3.5-2) ... 67s Setting up python3-iniconfig (2.1.0-1) ... 67s Setting up libpython3.14-minimal:amd64 (3.14.0-4) ... 67s Setting up libaec0:amd64 (1.1.4-2) ... 67s Setting up python3-decorator (5.2.1-2) ... 68s Setting up libblas3:amd64 (3.12.1-7) ... 68s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 68s Setting up liblzf1:amd64 (3.6-4) ... 68s Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 68s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 68s Setting up python3-pluggy (1.6.0-1) ... 69s Setting up python3.14-minimal (3.14.0-4) ... 69s Setting up libsz2:amd64 (1.1.4-2) ... 69s Setting up liblapack3:amd64 (3.12.1-7) ... 69s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 69s Setting up libpython3.14-stdlib:amd64 (3.14.0-4) ... 69s Setting up python3-pytest (8.3.5-2) ... 69s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 71s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 71s Setting up python3.14 (3.14.0-4) ... 71s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 71s Setting up python3-scipy (1.15.3-1ubuntu1) ... 75s /usr/lib/python3/dist-packages/scipy/optimize/_optimize.py:921: SyntaxWarning: 'break' in a 'finally' block 75s break 76s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 76s Setting up python3-all (3.13.7-2) ... 76s Setting up python3-h5py (3.13.0-1ubuntu1) ... 76s Setting up python3-h5sparse (0.1.0-8) ... 76s Processing triggers for libc-bin (2.42-2ubuntu2) ... 76s Processing triggers for systemd (257.9-0ubuntu2) ... 76s Processing triggers for man-db (2.13.1-1) ... 78s autopkgtest [10:25:09]: test environment configured for cross building 78s autopkgtest [10:25:09]: test run-unit-test: [----------------------- 78s ============================= test session starts ============================== 78s platform linux -- Python 3.14.0, pytest-8.3.5, pluggy-1.6.0 -- /usr/bin/python3.14 78s cachedir: .pytest_cache 78s rootdir: /tmp/autopkgtest.KvFaJw/build.ztZ/src 78s plugins: typeguard-4.4.2 78s collecting ... collected 0 items / 1 error 78s 78s ==================================== ERRORS ==================================== 78s ______________________ ERROR collecting h5sparse/tests.py ______________________ 78s ImportError while importing test module '/tmp/autopkgtest.KvFaJw/build.ztZ/src/h5sparse/tests.py'. 78s Hint: make sure your test modules/packages have valid Python names. 78s Traceback: 78s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 78s from . import _debian_h5py_serial as _h5py 78s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 78s from . import _errors 78s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 78s 78s During handling of the above exception, another exception occurred: 78s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 78s return _bootstrap._gcd_import(name[level:], package, level) 78s h5sparse/__init__.py:2: in 78s from .h5sparse import Group, File, Dataset # noqa: F401 78s h5sparse/h5sparse.py:2: in 78s import h5py 78s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 78s from . import _debian_h5py_mpi as _h5py 78s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 78s =============================== warnings summary =============================== 78s h5sparse/__init__.py:1 78s /tmp/autopkgtest.KvFaJw/build.ztZ/src/h5sparse/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 78s import pkg_resources 78s 78s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 78s =========================== short test summary info ============================ 78s ERROR h5sparse/tests.py 78s !!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!! 78s ========================= 1 warning, 1 error in 0.17s ========================== 78s autopkgtest [10:25:09]: test run-unit-test: -----------------------] 79s run-unit-test FAIL non-zero exit status 2 79s autopkgtest [10:25:10]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 79s autopkgtest [10:25:10]: test autodep8-python3: preparing testbed 98s Creating nova instance adt-resolute-i386-h5sparse-20251117-102351-juju-7f2275-prod-proposed-migration-environment-15-f400d369-881e-4cd1-b7f7-010696937877 from image adt/ubuntu-resolute-amd64-server-20251117.img (UUID 9762b0cc-7c5b-4854-acd5-cc74ad0de8c6)... 140s autopkgtest [10:26:11]: testbed dpkg architecture: amd64 140s autopkgtest [10:26:11]: testbed apt version: 3.1.11 140s autopkgtest [10:26:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup 140s autopkgtest [10:26:11]: testbed release detected to be: resolute 141s autopkgtest [10:26:12]: updating testbed package index (apt update) 141s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 141s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 141s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 141s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 141s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [80.3 kB] 141s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [881 kB] 142s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 142s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 142s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [118 kB] 142s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [158 kB] 142s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3128 B] 142s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 142s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 142s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 142s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [614 kB] 142s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [282 kB] 142s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [22.2 kB] 142s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [6516 B] 143s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [13.4 kB] 143s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [680 B] 144s Fetched 2367 kB in 1s (1653 kB/s) 145s Reading package lists... 145s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 145s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 145s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 145s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 146s Reading package lists... 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s Calculating upgrade... 146s The following packages will be upgraded: 146s libpython3-stdlib python3 python3-minimal usbutils 146s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 146s Need to get 146 kB of archives. 146s After this operation, 0 B of additional disk space will be used. 146s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 146s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 146s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 146s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 usbutils amd64 1:019-1 [83.9 kB] 146s dpkg-preconfigure: unable to re-open stdin: No such file or directory 146s Fetched 146 kB in 0s (0 B/s) 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 147s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 147s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 147s Setting up python3-minimal (3.13.7-2) ... 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 147s Preparing to unpack .../python3_3.13.7-2_amd64.deb ... 147s running python pre-rtupdate hooks for python3.13... 147s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 147s Preparing to unpack .../libpython3-stdlib_3.13.7-2_amd64.deb ... 147s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 147s Preparing to unpack .../usbutils_1%3a019-1_amd64.deb ... 147s Unpacking usbutils (1:019-1) over (1:018-2) ... 147s Setting up usbutils (1:019-1) ... 147s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 147s Setting up python3 (3.13.7-2) ... 147s running python rtupdate hooks for python3.13... 147s running python post-rtupdate hooks for python3.13... 147s Processing triggers for man-db (2.13.1-1) ... 148s autopkgtest [10:26:19]: upgrading testbed (apt dist-upgrade and autopurge) 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 148s Calculating upgrade... 148s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 148s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Solving dependencies... 149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Solving dependencies... 151s The following NEW packages will be installed: 151s libaec0 libblas3 libgfortran5 libhdf5-310 libhdf5-hl-310 liblapack3 liblzf1 151s libpython3.14-minimal libpython3.14-stdlib libsz2 python3-all 151s python3-decorator python3-h5py python3-h5py-serial python3-h5sparse 151s python3-numpy python3-numpy-dev python3-scipy python3.14 python3.14-minimal 151s 0 upgraded, 20 newly installed, 0 to remove and 0 not upgraded. 151s Need to get 39.1 MB of archives. 151s After this operation, 190 MB of additional disk space will be used. 151s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1ubuntu1 [147 kB] 151s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 151s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 152s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 152s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy amd64 1:2.2.4+ds-1ubuntu1 [5377 kB] 152s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.0-4 [906 kB] 152s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-minimal amd64 3.14.0-4 [2559 kB] 152s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 152s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 152s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 152s Get:11 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 152s Get:12 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 152s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.0-4 [2397 kB] 152s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14 amd64 3.14.0-4 [805 kB] 152s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-all amd64 3.13.7-2 [890 B] 152s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 152s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 152s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 153s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.15.3-1ubuntu1 [20.3 MB] 153s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5sparse all 0.1.0-8 [6866 B] 153s Fetched 39.1 MB in 2s (22.9 MB/s) 153s Selecting previously unselected package python3-numpy-dev:amd64. 153s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 153s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 153s Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 153s Selecting previously unselected package libblas3:amd64. 153s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 153s Unpacking libblas3:amd64 (3.12.1-7) ... 153s Selecting previously unselected package libgfortran5:amd64. 153s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 153s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 153s Selecting previously unselected package liblapack3:amd64. 153s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 153s Unpacking liblapack3:amd64 (3.12.1-7) ... 153s Selecting previously unselected package python3-numpy. 153s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 153s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 153s Selecting previously unselected package libpython3.14-minimal:amd64. 153s Preparing to unpack .../05-libpython3.14-minimal_3.14.0-4_amd64.deb ... 153s Unpacking libpython3.14-minimal:amd64 (3.14.0-4) ... 153s Selecting previously unselected package python3.14-minimal. 153s Preparing to unpack .../06-python3.14-minimal_3.14.0-4_amd64.deb ... 153s Unpacking python3.14-minimal (3.14.0-4) ... 153s Selecting previously unselected package libaec0:amd64. 153s Preparing to unpack .../07-libaec0_1.1.4-2_amd64.deb ... 153s Unpacking libaec0:amd64 (1.1.4-2) ... 153s Selecting previously unselected package libsz2:amd64. 153s Preparing to unpack .../08-libsz2_1.1.4-2_amd64.deb ... 153s Unpacking libsz2:amd64 (1.1.4-2) ... 153s Selecting previously unselected package libhdf5-310:amd64. 153s Preparing to unpack .../09-libhdf5-310_1.14.5+repack-4_amd64.deb ... 153s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 154s Selecting previously unselected package libhdf5-hl-310:amd64. 154s Preparing to unpack .../10-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 154s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 154s Selecting previously unselected package liblzf1:amd64. 154s Preparing to unpack .../11-liblzf1_3.6-4_amd64.deb ... 154s Unpacking liblzf1:amd64 (3.6-4) ... 154s Selecting previously unselected package libpython3.14-stdlib:amd64. 154s Preparing to unpack .../12-libpython3.14-stdlib_3.14.0-4_amd64.deb ... 154s Unpacking libpython3.14-stdlib:amd64 (3.14.0-4) ... 154s Selecting previously unselected package python3.14. 154s Preparing to unpack .../13-python3.14_3.14.0-4_amd64.deb ... 154s Unpacking python3.14 (3.14.0-4) ... 154s Selecting previously unselected package python3-all. 154s Preparing to unpack .../14-python3-all_3.13.7-2_amd64.deb ... 154s Unpacking python3-all (3.13.7-2) ... 154s Selecting previously unselected package python3-decorator. 154s Preparing to unpack .../15-python3-decorator_5.2.1-2_all.deb ... 154s Unpacking python3-decorator (5.2.1-2) ... 154s Selecting previously unselected package python3-h5py-serial. 154s Preparing to unpack .../16-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 154s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 154s Selecting previously unselected package python3-h5py. 154s Preparing to unpack .../17-python3-h5py_3.13.0-1ubuntu1_all.deb ... 154s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 154s Selecting previously unselected package python3-scipy. 154s Preparing to unpack .../18-python3-scipy_1.15.3-1ubuntu1_amd64.deb ... 154s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 154s Selecting previously unselected package python3-h5sparse. 154s Preparing to unpack .../19-python3-h5sparse_0.1.0-8_all.deb ... 154s Unpacking python3-h5sparse (0.1.0-8) ... 154s Setting up libpython3.14-minimal:amd64 (3.14.0-4) ... 154s Setting up libaec0:amd64 (1.1.4-2) ... 154s Setting up python3-decorator (5.2.1-2) ... 154s Setting up libblas3:amd64 (3.12.1-7) ... 154s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 154s Setting up liblzf1:amd64 (3.6-4) ... 154s Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 154s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 154s Setting up python3.14-minimal (3.14.0-4) ... 155s Setting up libsz2:amd64 (1.1.4-2) ... 155s Setting up liblapack3:amd64 (3.12.1-7) ... 155s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 155s Setting up libpython3.14-stdlib:amd64 (3.14.0-4) ... 155s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 157s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 157s Setting up python3.14 (3.14.0-4) ... 157s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 157s Setting up python3-scipy (1.15.3-1ubuntu1) ... 160s /usr/lib/python3/dist-packages/scipy/optimize/_optimize.py:921: SyntaxWarning: 'break' in a 'finally' block 160s break 162s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 162s Setting up python3-all (3.13.7-2) ... 162s Setting up python3-h5py (3.13.0-1ubuntu1) ... 162s Setting up python3-h5sparse (0.1.0-8) ... 162s Processing triggers for libc-bin (2.42-2ubuntu2) ... 162s Processing triggers for systemd (257.9-0ubuntu2) ... 162s Processing triggers for man-db (2.13.1-1) ... 164s autopkgtest [10:26:35]: test environment configured for cross building 164s autopkgtest [10:26:35]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import h5sparse; print(h5sparse)" ; done 164s autopkgtest [10:26:35]: test autodep8-python3: [----------------------- 164s Testing with python3.14: 164s Traceback (most recent call last): 164s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 24, in 164s from . import _debian_h5py_serial as _h5py 164s File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py", line 25, in 164s from . import _errors 164s ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 164s 164s During handling of the above exception, another exception occurred: 164s 164s Traceback (most recent call last): 164s File "", line 1, in 164s import h5sparse; print(h5sparse) 164s ^^^^^^^^^^^^^^^ 164s File "/usr/lib/python3/dist-packages/h5sparse/__init__.py", line 2, in 164s from .h5sparse import Group, File, Dataset # noqa: F401 164s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 164s File "/usr/lib/python3/dist-packages/h5sparse/h5sparse.py", line 2, in 164s import h5py 164s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 26, in 164s from . import _debian_h5py_mpi as _h5py 164s ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 165s autopkgtest [10:26:36]: test autodep8-python3: -----------------------] 165s autodep8-python3 FAIL non-zero exit status 1 165s autopkgtest [10:26:36]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 165s autopkgtest [10:26:36]: @@@@@@@@@@@@@@@@@@@@ summary 165s run-unit-test FAIL non-zero exit status 2 165s autodep8-python3 FAIL non-zero exit status 1