0s autopkgtest [11:08:49]: starting date and time: 2026-02-05 11:08:49+0000 0s autopkgtest [11:08:49]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [11:08:49]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1f5hkt87/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade transtermhp --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.42-2ubuntu5 -- lxd -r lxd-armhf-10.145.243.230 lxd-armhf-10.145.243.230:autopkgtest/ubuntu/resolute/armhf 27s autopkgtest [11:09:16]: testbed dpkg architecture: armhf 29s autopkgtest [11:09:18]: testbed apt version: 3.1.14 35s autopkgtest [11:09:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup 37s autopkgtest [11:09:26]: testbed release detected to be: None 45s autopkgtest [11:09:34]: updating testbed package index (apt update) 47s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 47s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [124 kB] 47s Get:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease [124 kB] 47s Get:4 http://ftpmaster.internal/ubuntu resolute-security InRelease [124 kB] 47s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5260 B] 47s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [35.4 kB] 47s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1696 kB] 48s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [227 kB] 48s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [253 kB] 48s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [1396 kB] 48s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [9664 B] 48s Get:12 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.3 MB] 50s Get:13 http://ftpmaster.internal/ubuntu resolute/main Sources [1402 kB] 50s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1374 kB] 50s Get:15 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [14.9 MB] 53s Fetched 43.1 MB in 7s (6270 kB/s) 55s Reading package lists... 60s autopkgtest [11:09:49]: upgrading testbed (apt dist-upgrade and autopurge) 62s Reading package lists... 63s Building dependency tree... 63s Reading state information... 63s Calculating upgrade... 64s The following packages will be upgraded: 64s libc-bin libc-gconv-modules-extra libc6 locales 64s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 64s Need to get 7850 kB of archives. 64s After this operation, 0 B of additional disk space will be used. 64s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc-gconv-modules-extra armhf 2.42-2ubuntu5 [1417 kB] 65s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc6 armhf 2.42-2ubuntu5 [1632 kB] 65s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc-bin armhf 2.42-2ubuntu5 [545 kB] 65s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf locales all 2.42-2ubuntu5 [4255 kB] 67s Preconfiguring packages ... 67s Fetched 7850 kB in 3s (3099 kB/s) 67s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 67s Preparing to unpack .../libc-gconv-modules-extra_2.42-2ubuntu5_armhf.deb ... 67s Unpacking libc-gconv-modules-extra:armhf (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 67s Setting up libc-gconv-modules-extra:armhf (2.42-2ubuntu5) ... 67s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 67s Preparing to unpack .../libc6_2.42-2ubuntu5_armhf.deb ... 67s readlink: /usr/lib/libeatmydata: No such file or directory 67s Unpacking libc6:armhf (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 68s Setting up libc6:armhf (2.42-2ubuntu5) ... 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 68s Preparing to unpack .../libc-bin_2.42-2ubuntu5_armhf.deb ... 68s Unpacking libc-bin (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 68s Setting up libc-bin (2.42-2ubuntu5) ... 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 68s Preparing to unpack .../locales_2.42-2ubuntu5_all.deb ... 68s Unpacking locales (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 68s Setting up locales (2.42-2ubuntu5) ... 69s Generating locales (this might take a while)... 71s en_US.UTF-8... done 71s Generation complete. 71s Processing triggers for systemd (259-1ubuntu3) ... 72s Processing triggers for man-db (2.13.1-1) ... 76s Reading package lists... 76s Building dependency tree... 76s Reading state information... 76s Solving dependencies... 77s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 79s autopkgtest [11:10:08]: rebooting testbed after setup commands that affected boot 131s autopkgtest [11:11:00]: testbed running kernel: Linux 6.8.0-87-generic #88~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 14 14:00:09 UTC 2 156s autopkgtest [11:11:25]: @@@@@@@@@@@@@@@@@@@@ apt-source transtermhp 166s Get:1 http://ftpmaster.internal/ubuntu resolute/universe transtermhp 2.09-5build1 (dsc) [2094 B] 166s Get:2 http://ftpmaster.internal/ubuntu resolute/universe transtermhp 2.09-5build1 (tar) [71.3 kB] 166s Get:3 http://ftpmaster.internal/ubuntu resolute/universe transtermhp 2.09-5build1 (diff) [16.0 kB] 166s gpgv: Signature made Tue Dec 2 22:01:13 2025 UTC 166s gpgv: using RSA key 92FE4F8B40CADC4ECCD60C1F5961FDBE9C619809 166s gpgv: Can't check signature: No public key 166s dpkg-source: warning: cannot verify inline signature for ./transtermhp_2.09-5build1.dsc: no acceptable signature found 167s autopkgtest [11:11:36]: testing package transtermhp version 2.09-5build1 169s autopkgtest [11:11:38]: build not needed 171s autopkgtest [11:11:40]: test run-unit-test: preparing testbed 173s Reading package lists... 173s Building dependency tree... 173s Reading state information... 173s Solving dependencies... 174s The following NEW packages will be installed: 174s transtermhp 174s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 174s Need to get 130 kB of archives. 174s After this operation, 487 kB of additional disk space will be used. 174s Get:1 http://ftpmaster.internal/ubuntu resolute/universe armhf transtermhp armhf 2.09-5build1 [130 kB] 175s Fetched 130 kB in 0s (324 kB/s) 175s Selecting previously unselected package transtermhp. 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 175s Preparing to unpack .../transtermhp_2.09-5build1_armhf.deb ... 175s Unpacking transtermhp (2.09-5build1) ... 175s Setting up transtermhp (2.09-5build1) ... 175s Processing triggers for man-db (2.13.1-1) ... 183s autopkgtest [11:11:52]: test run-unit-test: [----------------------- 185s calibrate.sh 185s expterm.dat 185s infile.fasta 185s make_expterm.py 185s mfold_rna.sh 185s random_fasta.py 185s Test 1 185s TransTerm Options = 185s NOTE: warnings about 'using version 1.0 confidence' are expected and OK. 185s TransTermHP v2.08 (built on Dec 2 2025) 185s WARNING: USING VERSION 1.0 CONFIDENCE. 185s (use -p expterm.dat to use v2.0 confidence) 185s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 185s 185s --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 185s --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 185s --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 185s --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 185s --start-cut=0 --end-cut=25 185s 185s 185s warning: no examples in genes; can't compute conf. 185s 185s Each terminator entry starts in column 3 and is of the form: 185s term # start - end +/- regionconf hp tail | notes 185s Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. 185s Genes are interspersed, and start the first column. 185s 185s 185s Wall clock time = 0 seconds. 185s calibrate.sh: Running TransTerm on random sequence with %AT = 0.26 202s WARNING: USING VERSION 1.0 CONFIDENCE. 202s (use -p expterm.dat to use v2.0 confidence) 202s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 224s Seq: random (length 20000000, 14782 genes) 224s 225s Wall clock time = 23 seconds. 225s calibrate.sh: Running TransTerm on random sequence with %AT = 0.28 242s WARNING: USING VERSION 1.0 CONFIDENCE. 242s (use -p expterm.dat to use v2.0 confidence) 242s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 268s Seq: random (length 20000000, 14820 genes) 268s 269s Wall clock time = 27 seconds. 269s calibrate.sh: Running TransTerm on random sequence with %AT = 0.30 286s WARNING: USING VERSION 1.0 CONFIDENCE. 286s (use -p expterm.dat to use v2.0 confidence) 286s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 315s Seq: random (length 20000000, 14743 genes) 315s 316s Wall clock time = 30 seconds. 316s calibrate.sh: Running TransTerm on random sequence with %AT = 0.32 332s WARNING: USING VERSION 1.0 CONFIDENCE. 332s (use -p expterm.dat to use v2.0 confidence) 332s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 366s Seq: random (length 20000000, 14756 genes) 366s 367s Wall clock time = 35 seconds. 367s calibrate.sh: Running TransTerm on random sequence with %AT = 0.34 385s WARNING: USING VERSION 1.0 CONFIDENCE. 385s (use -p expterm.dat to use v2.0 confidence) 385s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 421s Seq: random (length 20000000, 14818 genes) 421s 421s Wall clock time = 37 seconds. 421s calibrate.sh: Running TransTerm on random sequence with %AT = 0.36 438s WARNING: USING VERSION 1.0 CONFIDENCE. 438s (use -p expterm.dat to use v2.0 confidence) 438s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 477s Seq: random (length 20000000, 14805 genes) 477s 478s Wall clock time = 40 seconds. 478s calibrate.sh: Running TransTerm on random sequence with %AT = 0.38 494s WARNING: USING VERSION 1.0 CONFIDENCE. 494s (use -p expterm.dat to use v2.0 confidence) 494s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 537s Seq: random (length 20000000, 14801 genes) 537s 538s Wall clock time = 44 seconds. 538s calibrate.sh: Running TransTerm on random sequence with %AT = 0.40 554s WARNING: USING VERSION 1.0 CONFIDENCE. 554s (use -p expterm.dat to use v2.0 confidence) 554s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 600s Seq: random (length 20000000, 14797 genes) 600s 600s Wall clock time = 46 seconds. 600s calibrate.sh: Running TransTerm on random sequence with %AT = 0.42 617s WARNING: USING VERSION 1.0 CONFIDENCE. 617s (use -p expterm.dat to use v2.0 confidence) 617s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 665s Seq: random (length 20000000, 14869 genes) 665s 666s Wall clock time = 49 seconds. 666s calibrate.sh: Running TransTerm on random sequence with %AT = 0.44 683s WARNING: USING VERSION 1.0 CONFIDENCE. 683s (use -p expterm.dat to use v2.0 confidence) 683s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 733s Seq: random (length 20000000, 14710 genes) 733s 734s Wall clock time = 51 seconds. 734s calibrate.sh: Running TransTerm on random sequence with %AT = 0.46 751s WARNING: USING VERSION 1.0 CONFIDENCE. 751s (use -p expterm.dat to use v2.0 confidence) 751s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 804s Seq: random (length 20000000, 14792 genes) 804s 804s Wall clock time = 53 seconds. 804s calibrate.sh: Running TransTerm on random sequence with %AT = 0.48 821s WARNING: USING VERSION 1.0 CONFIDENCE. 821s (use -p expterm.dat to use v2.0 confidence) 821s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 876s Seq: random (length 20000000, 14740 genes) 876s 877s Wall clock time = 56 seconds. 877s calibrate.sh: Running TransTerm on random sequence with %AT = 0.50 893s WARNING: USING VERSION 1.0 CONFIDENCE. 893s (use -p expterm.dat to use v2.0 confidence) 893s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 950s Seq: random (length 20000000, 14839 genes) 950s 950s Wall clock time = 57 seconds. 950s calibrate.sh: Running TransTerm on random sequence with %AT = 0.52 967s WARNING: USING VERSION 1.0 CONFIDENCE. 967s (use -p expterm.dat to use v2.0 confidence) 967s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1025s Seq: random (length 20000000, 14846 genes) 1025s 1026s Wall clock time = 59 seconds. 1026s calibrate.sh: Running TransTerm on random sequence with %AT = 0.54 1043s WARNING: USING VERSION 1.0 CONFIDENCE. 1043s (use -p expterm.dat to use v2.0 confidence) 1043s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1103s Seq: random (length 20000000, 14664 genes) 1103s 1103s Wall clock time = 60 seconds. 1104s calibrate.sh: Running TransTerm on random sequence with %AT = 0.56 1120s WARNING: USING VERSION 1.0 CONFIDENCE. 1120s (use -p expterm.dat to use v2.0 confidence) 1120s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1182s Seq: random (length 20000000, 14787 genes) 1182s 1182s Wall clock time = 62 seconds. 1182s calibrate.sh: Running TransTerm on random sequence with %AT = 0.58 1199s WARNING: USING VERSION 1.0 CONFIDENCE. 1199s (use -p expterm.dat to use v2.0 confidence) 1199s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1262s Seq: random (length 20000000, 14815 genes) 1262s 1263s Wall clock time = 64 seconds. 1263s calibrate.sh: Running TransTerm on random sequence with %AT = 0.60 1279s WARNING: USING VERSION 1.0 CONFIDENCE. 1279s (use -p expterm.dat to use v2.0 confidence) 1279s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1344s Seq: random (length 20000000, 14778 genes) 1344s 1344s Wall clock time = 65 seconds. 1344s calibrate.sh: Running TransTerm on random sequence with %AT = 0.62 1361s WARNING: USING VERSION 1.0 CONFIDENCE. 1361s (use -p expterm.dat to use v2.0 confidence) 1361s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1426s Seq: random (length 20000000, 14803 genes) 1426s 1426s Wall clock time = 65 seconds. 1426s calibrate.sh: Running TransTerm on random sequence with %AT = 0.64 1443s WARNING: USING VERSION 1.0 CONFIDENCE. 1443s (use -p expterm.dat to use v2.0 confidence) 1443s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1510s Seq: random (length 20000000, 14789 genes) 1510s 1510s Wall clock time = 67 seconds. 1510s calibrate.sh: Running TransTerm on random sequence with %AT = 0.66 1527s WARNING: USING VERSION 1.0 CONFIDENCE. 1527s (use -p expterm.dat to use v2.0 confidence) 1527s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1595s Seq: random (length 20000000, 14794 genes) 1595s 1595s Wall clock time = 68 seconds. 1595s calibrate.sh: Running TransTerm on random sequence with %AT = 0.68 1612s WARNING: USING VERSION 1.0 CONFIDENCE. 1612s (use -p expterm.dat to use v2.0 confidence) 1612s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1680s Seq: random (length 20000000, 14762 genes) 1680s 1680s Wall clock time = 68 seconds. 1680s calibrate.sh: Running TransTerm on random sequence with %AT = 0.70 1697s WARNING: USING VERSION 1.0 CONFIDENCE. 1697s (use -p expterm.dat to use v2.0 confidence) 1697s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1766s Seq: random (length 20000000, 14823 genes) 1766s 1767s Wall clock time = 70 seconds. 1767s calibrate.sh: Running TransTerm on random sequence with %AT = 0.72 1784s WARNING: USING VERSION 1.0 CONFIDENCE. 1784s (use -p expterm.dat to use v2.0 confidence) 1784s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1854s Seq: random (length 20000000, 14776 genes) 1854s 1855s Wall clock time = 71 seconds. 1855s calibrate.sh: Running TransTerm on random sequence with %AT = 0.74 1871s WARNING: USING VERSION 1.0 CONFIDENCE. 1871s (use -p expterm.dat to use v2.0 confidence) 1871s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 1942s Seq: random (length 20000000, 14820 genes) 1942s 1942s Wall clock time = 71 seconds. 1942s calibrate.sh: Running TransTerm on random sequence with %AT = 0.76 1959s WARNING: USING VERSION 1.0 CONFIDENCE. 1959s (use -p expterm.dat to use v2.0 confidence) 1959s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 2030s Seq: random (length 20000000, 14779 genes) 2030s 2031s Wall clock time = 72 seconds. 2031s calibrate.sh: Running TransTerm on random sequence with %AT = 0.78 2049s WARNING: USING VERSION 1.0 CONFIDENCE. 2049s (use -p expterm.dat to use v2.0 confidence) 2049s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 2121s Seq: random (length 20000000, 14759 genes) 2121s 2121s Wall clock time = 73 seconds. 2121s calibrate.sh: Running TransTerm on random sequence with %AT = 0.80 2139s WARNING: USING VERSION 1.0 CONFIDENCE. 2139s (use -p expterm.dat to use v2.0 confidence) 2139s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 2211s Seq: random (length 20000000, 14902 genes) 2211s 2212s Wall clock time = 74 seconds. 2212s calibrate.sh: Running TransTerm on random sequence with %AT = 0.82 2229s WARNING: USING VERSION 1.0 CONFIDENCE. 2229s (use -p expterm.dat to use v2.0 confidence) 2229s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 2302s Seq: random (length 20000000, 14814 genes) 2302s 2303s Wall clock time = 74 seconds. 2303s calibrate.sh: Running TransTerm on random sequence with %AT = 0.84 2320s WARNING: USING VERSION 1.0 CONFIDENCE. 2320s (use -p expterm.dat to use v2.0 confidence) 2320s Version 1 confidence scheme exists only for debugging andhistorical reasons. Use the updated scoring system. 2394s Seq: random (length 20000000, 14794 genes) 2394s 2395s Wall clock time = 75 seconds. 2395s Creating distribution file in expterm.dat 2398s You must specify a background distribution file with '-p expterm.dat'. 2398s Done. You can run transterm with this background distribution using '-r expterm.dat' 2398s PASS 2398s Test 2 2398s 2ndscore (Dec 2 2025) 2398s 2398s --gc=-2.1 --au=-1.3 --gu=-0.8 --mm=3.5 --gap=3.9 2398s --max-len=59 --max-loop=13 --min-loop=3 2398s --loop-penalty=4.1,4.9,4.4,4.7,5,5.1,5.2,5.3,5.4,5.5,5.6 2398s 2398s 1. Seq: 9258 (length 34) 2398s 2. Seq: 9361 (length 611) 2398s 3. Seq: 9365 (length 796) 2398s 4. Seq: 9371 (length 762) 2398s 5. Seq: 9544 (length 810) 2398s 6. Seq: 9598 (length 797) 2398s 7. Seq: 9606 (length 797) 2398s 8. Seq: 9615 (length 802) 2398s 9. Seq: 9685 (length 687) 2398s 10. Seq: 9785 (length 793) 2398s 11. Seq: 9796 (length 806) 2398s 12. Seq: 9913 (length 798) 2398s 13. Seq: 9986 (length 789) 2398s 14. Seq: 10090 (length 770) 2398s 15. Seq: 10116 (length 832) 2398s 16. Seq: 10141 (length 327) 2398s 17. Seq: 13616 (length 884) 2398s 18. Seq: 28377 (length 87) 2398s 19. Seq: 42254 (length 372)PASS 2398s 2398s autopkgtest [11:48:47]: test run-unit-test: -----------------------] 2402s autopkgtest [11:48:51]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 2402s run-unit-test PASS 2406s autopkgtest [11:48:55]: @@@@@@@@@@@@@@@@@@@@ summary 2406s run-unit-test PASS