0s autopkgtest [23:10:23]: starting date and time: 2026-02-09 23:10:23+0000 0s autopkgtest [23:10:23]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [23:10:23]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9r1mhybq/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-saturn --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- lxd -r lxd-armhf-10.145.243.28 lxd-armhf-10.145.243.28:autopkgtest/ubuntu/resolute/armhf 25s autopkgtest [23:10:48]: testbed dpkg architecture: armhf 27s autopkgtest [23:10:50]: testbed apt version: 3.1.15 31s autopkgtest [23:10:54]: @@@@@@@@@@@@@@@@@@@@ test bed setup 33s autopkgtest [23:10:56]: testbed release detected to be: None 40s autopkgtest [23:11:03]: updating testbed package index (apt update) 43s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 43s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [124 kB] 43s Get:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease [124 kB] 43s Get:4 http://ftpmaster.internal/ubuntu resolute-security InRelease [124 kB] 44s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 44s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 44s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 46s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [246 kB] 47s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [1405 kB] 49s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [7452 B] 49s Get:11 http://ftpmaster.internal/ubuntu resolute/restricted Sources [15.1 kB] 49s Get:12 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.4 MB] 75s Get:13 http://ftpmaster.internal/ubuntu resolute/main Sources [1398 kB] 77s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1374 kB] 79s Get:15 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [15.3 MB] 96s Fetched 43.5 MB in 54s (810 kB/s) 98s Reading package lists... 103s autopkgtest [23:12:06]: upgrading testbed (apt dist-upgrade and autopurge) 105s Reading package lists... 106s Building dependency tree... 106s Reading state information... 106s Calculating upgrade... 107s The following packages will be upgraded: 107s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 107s libip6tc2 libxtables12 wget 108s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 108s Need to get 2407 kB of archives. 108s After this operation, 152 kB of additional disk space will be used. 108s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf iptables armhf 1.8.11-2ubuntu3 [345 kB] 108s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libip4tc2 armhf 1.8.11-2ubuntu3 [22.0 kB] 108s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libip6tc2 armhf 1.8.11-2ubuntu3 [22.3 kB] 108s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libxtables12 armhf 1.8.11-2ubuntu3 [33.5 kB] 108s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf iproute2 armhf 6.18.0-1ubuntu1 [1123 kB] 110s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libcryptsetup12 armhf 2:2.8.0-1ubuntu3 [254 kB] 111s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf wget armhf 1.25.0-2ubuntu4 [327 kB] 111s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf cryptsetup-bin armhf 2:2.8.0-1ubuntu3 [232 kB] 112s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf dracut-install armhf 109-11ubuntu1 [47.9 kB] 112s Preconfiguring packages ... 112s Fetched 2407 kB in 4s (539 kB/s) 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68683 files and directories currently installed.) 113s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_armhf.deb ... 113s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 113s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_armhf.deb ... 113s Unpacking libip4tc2:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 113s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_armhf.deb ... 113s Unpacking libip6tc2:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 113s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_armhf.deb ... 113s Unpacking libxtables12:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 113s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_armhf.deb ... 113s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 113s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_armhf.deb ... 113s Unpacking libcryptsetup12:armhf (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 113s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_armhf.deb ... 113s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 113s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_armhf.deb ... 113s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 113s Preparing to unpack .../8-dracut-install_109-11ubuntu1_armhf.deb ... 113s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 113s Setting up libip4tc2:armhf (1.8.11-2ubuntu3) ... 113s Setting up wget (1.25.0-2ubuntu4) ... 113s Setting up libip6tc2:armhf (1.8.11-2ubuntu3) ... 113s Setting up libxtables12:armhf (1.8.11-2ubuntu3) ... 113s Setting up dracut-install (109-11ubuntu1) ... 113s Setting up libcryptsetup12:armhf (2:2.8.0-1ubuntu3) ... 113s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 113s Setting up iptables (1.8.11-2ubuntu3) ... 113s Setting up iproute2 (6.18.0-1ubuntu1) ... 114s Processing triggers for man-db (2.13.1-1build1) ... 115s Processing triggers for install-info (7.2-5) ... 115s Processing triggers for libc-bin (2.42-2ubuntu4) ... 119s Reading package lists... 120s Building dependency tree... 120s Reading state information... 120s Solving dependencies... 121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 123s autopkgtest [23:12:26]: rebooting testbed after setup commands that affected boot 165s autopkgtest [23:13:08]: testbed running kernel: Linux 6.8.0-87-generic #88~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 14 14:00:09 UTC 2 191s autopkgtest [23:13:34]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-saturn 205s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-saturn 1.14.0+dfsg-2 (dsc) [2224 B] 205s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-saturn 1.14.0+dfsg-2 (tar) [2945 kB] 205s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-saturn 1.14.0+dfsg-2 (diff) [5676 B] 206s gpgv: Signature made Mon Jan 13 08:15:45 2025 UTC 206s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 206s gpgv: issuer "crusoe@debian.org" 206s gpgv: Can't check signature: No public key 206s dpkg-source: warning: cannot verify inline signature for ./r-bioc-saturn_1.14.0+dfsg-2.dsc: no acceptable signature found 206s autopkgtest [23:13:49]: testing package r-bioc-saturn version 1.14.0+dfsg-2 208s autopkgtest [23:13:51]: build not needed 213s autopkgtest [23:13:56]: test pkg-r-autopkgtest: preparing testbed 215s Reading package lists... 216s Building dependency tree... 216s Reading state information... 216s Solving dependencies... 216s Some packages could not be installed. This may mean that you have 216s requested an impossible situation or if you are using the unstable 216s distribution that some required packages have not yet been created 216s or been moved out of Incoming. 216s The following information may help to resolve the situation: 216s 216s The following packages have unmet dependencies: 217s satisfy:command-line : Depends: r-bioc-saturn but it is not going to be installed 217s Depends: r-cran-knitr but it is not going to be installed 217s Depends: r-cran-rmarkdown but it is not going to be installed 217s Depends: r-cran-testthat but it is not going to be installed 217s Depends: r-cran-covr but it is not going to be installed 217s Depends: r-bioc-annotationhub but it is not going to be installed 217s Depends: r-bioc-ensembldb but it is not going to be installed 217s Depends: r-bioc-delayedarray but it is not installable 217s Depends: pkg-r-autopkgtest but it is not going to be installed 217s Depends: r-cran-knitr but it is not going to be installed 217s Depends: r-cran-rmarkdown but it is not going to be installed 217s Depends: r-cran-testthat but it is not going to be installed 217s Depends: r-cran-covr but it is not going to be installed 217s Depends: r-bioc-biocstyle but it is not going to be installed 217s Depends: r-bioc-annotationhub but it is not going to be installed 217s Depends: r-bioc-ensembldb but it is not going to be installed 217s Depends: r-bioc-edger but it is not installable 217s Depends: r-bioc-dexseq but it is not going to be installed 217s Depends: r-bioc-delayedarray but it is not installable 217s E: Unable to satisfy dependencies. Reached two conflicting assignments: 217s 1. satisfy:command-line:armhf=1 is selected for install 217s 2. satisfy:command-line:armhf Depends r-bioc-delayedarray 217s but none of the choices are installable: 217s [no choices] 217s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from resolute-proposed 220s Reading package lists... 221s Building dependency tree... 221s Reading state information... 221s Solving dependencies... 221s Some packages could not be installed. This may mean that you have 221s requested an impossible situation or if you are using the unstable 221s distribution that some required packages have not yet been created 221s or been moved out of Incoming. 221s The following information may help to resolve the situation: 221s 221s The following packages have unmet dependencies: 222s satisfy:command-line : Depends: r-bioc-saturn but it is not going to be installed 222s Depends: r-cran-knitr but it is not going to be installed 222s Depends: r-cran-rmarkdown but it is not going to be installed 222s Depends: r-cran-testthat but it is not going to be installed 222s Depends: r-cran-covr but it is not going to be installed 222s Depends: r-bioc-annotationhub but it is not going to be installed 222s Depends: r-bioc-ensembldb but it is not going to be installed 222s Depends: r-bioc-delayedarray but it is not installable 222s Depends: pkg-r-autopkgtest but it is not going to be installed 222s Depends: r-cran-knitr but it is not going to be installed 222s Depends: r-cran-rmarkdown but it is not going to be installed 222s Depends: r-cran-testthat but it is not going to be installed 222s Depends: r-cran-covr but it is not going to be installed 222s Depends: r-bioc-biocstyle but it is not going to be installed 222s Depends: r-bioc-annotationhub but it is not going to be installed 222s Depends: r-bioc-ensembldb but it is not going to be installed 222s Depends: r-bioc-edger but it is not installable 222s Depends: r-bioc-dexseq but it is not going to be installed 222s Depends: r-bioc-delayedarray but it is not installable 222s E: Unable to satisfy dependencies. Reached two conflicting assignments: 222s 1. satisfy:command-line:armhf=1 is selected for install 222s 2. satisfy:command-line:armhf Depends r-bioc-delayedarray 222s but none of the choices are installable: 222s [no choices] 222s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set 222s autopkgtest [23:14:05]: @@@@@@@@@@@@@@@@@@@@ summary 222s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set