0s autopkgtest [23:09:59]: starting date and time: 2026-02-09 23:09:59+0000 0s autopkgtest [23:09:59]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [23:09:59]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.016m4qbn/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-purecn --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- lxd -r lxd-armhf-10.145.243.239 lxd-armhf-10.145.243.239:autopkgtest/ubuntu/resolute/armhf 21s autopkgtest [23:10:20]: testbed dpkg architecture: armhf 23s autopkgtest [23:10:22]: testbed apt version: 3.1.15 27s autopkgtest [23:10:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 29s autopkgtest [23:10:28]: testbed release detected to be: None 36s autopkgtest [23:10:35]: updating testbed package index (apt update) 38s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 38s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [124 kB] 39s Get:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease [124 kB] 39s Get:4 http://ftpmaster.internal/ubuntu resolute-security InRelease [124 kB] 39s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 42s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 42s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 42s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [246 kB] 43s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [1405 kB] 45s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [7452 B] 45s Get:11 http://ftpmaster.internal/ubuntu resolute/restricted Sources [15.1 kB] 45s Get:12 http://ftpmaster.internal/ubuntu resolute/main Sources [1398 kB] 47s Get:13 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.4 MB] 77s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1374 kB] 79s Get:15 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [15.3 MB] 96s Fetched 43.5 MB in 58s (753 kB/s) 97s Reading package lists... 103s autopkgtest [23:11:42]: upgrading testbed (apt dist-upgrade and autopurge) 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s Calculating upgrade... 106s The following packages will be upgraded: 106s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 106s libip6tc2 libxtables12 wget 106s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s Need to get 2407 kB of archives. 106s After this operation, 152 kB of additional disk space will be used. 106s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf iptables armhf 1.8.11-2ubuntu3 [345 kB] 107s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libip4tc2 armhf 1.8.11-2ubuntu3 [22.0 kB] 107s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libip6tc2 armhf 1.8.11-2ubuntu3 [22.3 kB] 107s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libxtables12 armhf 1.8.11-2ubuntu3 [33.5 kB] 107s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf iproute2 armhf 6.18.0-1ubuntu1 [1123 kB] 108s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libcryptsetup12 armhf 2:2.8.0-1ubuntu3 [254 kB] 108s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf wget armhf 1.25.0-2ubuntu4 [327 kB] 109s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf cryptsetup-bin armhf 2:2.8.0-1ubuntu3 [232 kB] 109s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf dracut-install armhf 109-11ubuntu1 [47.9 kB] 109s Preconfiguring packages ... 110s Fetched 2407 kB in 3s (704 kB/s) 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68683 files and directories currently installed.) 110s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_armhf.deb ... 110s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 110s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_armhf.deb ... 110s Unpacking libip4tc2:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 110s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_armhf.deb ... 110s Unpacking libip6tc2:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 110s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_armhf.deb ... 110s Unpacking libxtables12:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 110s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_armhf.deb ... 110s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 110s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_armhf.deb ... 110s Unpacking libcryptsetup12:armhf (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 110s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_armhf.deb ... 110s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 110s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_armhf.deb ... 110s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 110s Preparing to unpack .../8-dracut-install_109-11ubuntu1_armhf.deb ... 110s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 110s Setting up libip4tc2:armhf (1.8.11-2ubuntu3) ... 110s Setting up wget (1.25.0-2ubuntu4) ... 110s Setting up libip6tc2:armhf (1.8.11-2ubuntu3) ... 110s Setting up libxtables12:armhf (1.8.11-2ubuntu3) ... 110s Setting up dracut-install (109-11ubuntu1) ... 110s Setting up libcryptsetup12:armhf (2:2.8.0-1ubuntu3) ... 110s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 110s Setting up iptables (1.8.11-2ubuntu3) ... 110s Setting up iproute2 (6.18.0-1ubuntu1) ... 111s Processing triggers for man-db (2.13.1-1build1) ... 112s Processing triggers for install-info (7.2-5) ... 112s Processing triggers for libc-bin (2.42-2ubuntu4) ... 114s Reading package lists... 114s Building dependency tree... 114s Reading state information... 115s Solving dependencies... 115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s autopkgtest [23:11:56]: rebooting testbed after setup commands that affected boot 158s autopkgtest [23:12:37]: testbed running kernel: Linux 6.8.0-87-generic #88~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 14 14:00:09 UTC 2 184s autopkgtest [23:13:03]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-purecn 201s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-purecn 2.12.0+dfsg-2 (dsc) [2504 B] 201s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-purecn 2.12.0+dfsg-2 (tar) [5496 kB] 201s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-purecn 2.12.0+dfsg-2 (diff) [6696 B] 201s gpgv: Signature made Tue Jan 14 08:02:30 2025 UTC 201s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 201s gpgv: issuer "crusoe@debian.org" 201s gpgv: Can't check signature: No public key 201s dpkg-source: warning: cannot verify inline signature for ./r-bioc-purecn_2.12.0+dfsg-2.dsc: no acceptable signature found 201s autopkgtest [23:13:20]: testing package r-bioc-purecn version 2.12.0+dfsg-2 204s autopkgtest [23:13:23]: build not needed 207s autopkgtest [23:13:26]: test pkg-r-autopkgtest: preparing testbed 209s Reading package lists... 209s Building dependency tree... 209s Reading state information... 209s Solving dependencies... 209s Some packages could not be installed. This may mean that you have 209s requested an impossible situation or if you are using the unstable 209s distribution that some required packages have not yet been created 209s or been moved out of Incoming. 209s The following information may help to resolve the situation: 209s 209s The following packages have unmet dependencies: 210s satisfy:command-line : Depends: r-bioc-purecn but it is not going to be installed 210s Depends: r-bioc-biocparallel but it is not installable 210s Depends: r-cran-pscbs but it is not going to be installed 210s Depends: r-cran-r.utils but it is not going to be installed 210s Depends: r-cran-covr but it is not going to be installed 210s Depends: r-cran-knitr but it is not going to be installed 210s Depends: r-cran-optparse but it is not going to be installed 210s Depends: r-bioc-org.hs.eg.db but it is not going to be installed 210s Depends: r-cran-jsonlite but it is not going to be installed 210s Depends: r-cran-markdown but it is not going to be installed 210s Depends: r-cran-rmarkdown but it is not going to be installed 210s Depends: r-cran-testthat but it is not going to be installed 210s Depends: pkg-r-autopkgtest but it is not going to be installed 210s Depends: r-bioc-biocparallel but it is not installable 210s Depends: r-bioc-biocstyle but it is not going to be installed 210s Depends: r-cran-pscbs but it is not going to be installed 210s Depends: r-cran-r.utils but it is not going to be installed 210s Depends: r-cran-covr but it is not going to be installed 210s Depends: r-cran-knitr but it is not going to be installed 210s Depends: r-cran-optparse but it is not going to be installed 210s Depends: r-bioc-org.hs.eg.db but it is not going to be installed 210s Depends: r-cran-jsonlite but it is not going to be installed 210s Depends: r-cran-markdown but it is not going to be installed 210s Depends: r-cran-rmarkdown but it is not going to be installed 210s Depends: r-cran-testthat but it is not going to be installed 210s E: Unable to satisfy dependencies. Reached two conflicting assignments: 210s 1. satisfy:command-line:armhf=1 is selected for install 210s 2. satisfy:command-line:armhf Depends r-bioc-biocparallel 210s but none of the choices are installable: 210s [no choices] 210s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from resolute-proposed 213s Reading package lists... 214s Building dependency tree... 214s Reading state information... 214s Solving dependencies... 214s Some packages could not be installed. This may mean that you have 214s requested an impossible situation or if you are using the unstable 214s distribution that some required packages have not yet been created 214s or been moved out of Incoming. 214s The following information may help to resolve the situation: 214s 214s The following packages have unmet dependencies: 214s satisfy:command-line : Depends: r-bioc-purecn but it is not going to be installed 214s Depends: r-bioc-biocparallel but it is not installable 214s Depends: r-cran-pscbs but it is not going to be installed 214s Depends: r-cran-r.utils but it is not going to be installed 214s Depends: r-cran-covr but it is not going to be installed 214s Depends: r-cran-knitr but it is not going to be installed 214s Depends: r-cran-optparse but it is not going to be installed 214s Depends: r-bioc-org.hs.eg.db but it is not going to be installed 214s Depends: r-cran-jsonlite but it is not going to be installed 214s Depends: r-cran-markdown but it is not going to be installed 214s Depends: r-cran-rmarkdown but it is not going to be installed 214s Depends: r-cran-testthat but it is not going to be installed 214s Depends: pkg-r-autopkgtest but it is not going to be installed 214s Depends: r-bioc-biocparallel but it is not installable 214s Depends: r-bioc-biocstyle but it is not going to be installed 214s Depends: r-cran-pscbs but it is not going to be installed 214s Depends: r-cran-r.utils but it is not going to be installed 214s Depends: r-cran-covr but it is not going to be installed 214s Depends: r-cran-knitr but it is not going to be installed 214s Depends: r-cran-optparse but it is not going to be installed 214s Depends: r-bioc-org.hs.eg.db but it is not going to be installed 214s Depends: r-cran-jsonlite but it is not going to be installed 214s Depends: r-cran-markdown but it is not going to be installed 214s Depends: r-cran-rmarkdown but it is not going to be installed 214s Depends: r-cran-testthat but it is not going to be installed 214s E: Unable to satisfy dependencies. Reached two conflicting assignments: 214s 1. satisfy:command-line:armhf=1 is selected for install 214s 2. satisfy:command-line:armhf Depends r-bioc-biocparallel 214s but none of the choices are installable: 214s [no choices] 214s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set 214s autopkgtest [23:13:33]: @@@@@@@@@@@@@@@@@@@@ summary 214s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set