0s autopkgtest [23:07:51]: starting date and time: 2026-02-09 23:07:51+0000 0s autopkgtest [23:07:51]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [23:07:51]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qgwbzehj/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-cummerbund --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- lxd -r lxd-armhf-10.145.243.115 lxd-armhf-10.145.243.115:autopkgtest/ubuntu/resolute/armhf 22s autopkgtest [23:08:13]: testbed dpkg architecture: armhf 24s autopkgtest [23:08:15]: testbed apt version: 3.1.15 28s autopkgtest [23:08:19]: @@@@@@@@@@@@@@@@@@@@ test bed setup 29s autopkgtest [23:08:20]: testbed release detected to be: None 37s autopkgtest [23:08:28]: updating testbed package index (apt update) 39s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 40s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [124 kB] 40s Get:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease [124 kB] 40s Get:4 http://ftpmaster.internal/ubuntu resolute-security InRelease [124 kB] 40s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 43s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 43s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 43s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [246 kB] 44s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [1405 kB] 46s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [7452 B] 46s Get:11 http://ftpmaster.internal/ubuntu resolute/main Sources [1398 kB] 49s Get:12 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.4 MB] 74s Get:13 http://ftpmaster.internal/ubuntu resolute/restricted Sources [15.1 kB] 74s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1374 kB] 75s Get:15 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [15.3 MB] 95s Fetched 43.5 MB in 56s (781 kB/s) 96s Reading package lists... 102s autopkgtest [23:09:33]: upgrading testbed (apt dist-upgrade and autopurge) 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s Calculating upgrade... 105s The following packages will be upgraded: 105s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 105s libip6tc2 libxtables12 wget 106s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s Need to get 2407 kB of archives. 106s After this operation, 152 kB of additional disk space will be used. 106s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf iptables armhf 1.8.11-2ubuntu3 [345 kB] 106s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libip4tc2 armhf 1.8.11-2ubuntu3 [22.0 kB] 106s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libip6tc2 armhf 1.8.11-2ubuntu3 [22.3 kB] 106s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libxtables12 armhf 1.8.11-2ubuntu3 [33.5 kB] 106s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf iproute2 armhf 6.18.0-1ubuntu1 [1123 kB] 108s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libcryptsetup12 armhf 2:2.8.0-1ubuntu3 [254 kB] 109s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf wget armhf 1.25.0-2ubuntu4 [327 kB] 109s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf cryptsetup-bin armhf 2:2.8.0-1ubuntu3 [232 kB] 109s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf dracut-install armhf 109-11ubuntu1 [47.9 kB] 110s Preconfiguring packages ... 110s Fetched 2407 kB in 4s (591 kB/s) 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68683 files and directories currently installed.) 110s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_armhf.deb ... 110s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 111s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_armhf.deb ... 111s Unpacking libip4tc2:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 111s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_armhf.deb ... 111s Unpacking libip6tc2:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 111s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_armhf.deb ... 111s Unpacking libxtables12:armhf (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 111s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_armhf.deb ... 111s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 111s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_armhf.deb ... 111s Unpacking libcryptsetup12:armhf (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 111s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_armhf.deb ... 111s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 112s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_armhf.deb ... 112s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 112s Preparing to unpack .../8-dracut-install_109-11ubuntu1_armhf.deb ... 112s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 112s Setting up libip4tc2:armhf (1.8.11-2ubuntu3) ... 112s Setting up wget (1.25.0-2ubuntu4) ... 112s Setting up libip6tc2:armhf (1.8.11-2ubuntu3) ... 112s Setting up libxtables12:armhf (1.8.11-2ubuntu3) ... 112s Setting up dracut-install (109-11ubuntu1) ... 112s Setting up libcryptsetup12:armhf (2:2.8.0-1ubuntu3) ... 112s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 112s Setting up iptables (1.8.11-2ubuntu3) ... 112s Setting up iproute2 (6.18.0-1ubuntu1) ... 112s Processing triggers for man-db (2.13.1-1build1) ... 113s Processing triggers for install-info (7.2-5) ... 113s Processing triggers for libc-bin (2.42-2ubuntu4) ... 116s Reading package lists... 116s Building dependency tree... 116s Reading state information... 116s Solving dependencies... 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 119s autopkgtest [23:09:50]: rebooting testbed after setup commands that affected boot 161s autopkgtest [23:10:32]: testbed running kernel: Linux 6.8.0-87-generic #88~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 14 14:00:09 UTC 2 186s autopkgtest [23:10:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-cummerbund 200s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-cummerbund 2.48.0-2 (dsc) [2268 B] 200s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-cummerbund 2.48.0-2 (tar) [2736 kB] 200s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-cummerbund 2.48.0-2 (diff) [4540 B] 200s gpgv: Signature made Tue Jan 14 11:32:36 2025 UTC 200s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 200s gpgv: issuer "crusoe@debian.org" 200s gpgv: Can't check signature: No public key 200s dpkg-source: warning: cannot verify inline signature for ./r-bioc-cummerbund_2.48.0-2.dsc: no acceptable signature found 201s autopkgtest [23:11:12]: testing package r-bioc-cummerbund version 2.48.0-2 203s autopkgtest [23:11:14]: build not needed 207s autopkgtest [23:11:18]: test pkg-r-autopkgtest: preparing testbed 209s Reading package lists... 210s Building dependency tree... 210s Reading state information... 210s Solving dependencies... 210s Some packages could not be installed. This may mean that you have 210s requested an impossible situation or if you are using the unstable 210s distribution that some required packages have not yet been created 210s or been moved out of Incoming. 210s The following information may help to resolve the situation: 210s 210s The following packages have unmet dependencies: 210s satisfy:command-line : Depends: r-bioc-cummerbund but it is not going to be installed 210s Depends: r-cran-cluster but it is not going to be installed 210s Depends: r-cran-plyr but it is not going to be installed 210s Depends: r-cran-stringr but it is not going to be installed 210s Depends: r-bioc-genomicfeatures but it is not going to be installed 210s Depends: r-bioc-genomicranges but it is not installable 210s Depends: r-cran-rjson but it is not going to be installed 210s Depends: pkg-r-autopkgtest but it is not going to be installed 210s Depends: r-cran-cluster but it is not going to be installed 210s Depends: r-cran-stringr but it is not going to be installed 210s Depends: r-bioc-genomicfeatures but it is not going to be installed 210s Depends: r-bioc-genomicranges but it is not installable 210s Depends: r-cran-rjson but it is not going to be installed 210s E: Unable to satisfy dependencies. Reached two conflicting assignments: 210s 1. satisfy:command-line:armhf=1 is selected for install 210s 2. satisfy:command-line:armhf Depends r-bioc-genomicranges 210s but none of the choices are installable: 210s [no choices] 210s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from resolute-proposed 214s Reading package lists... 215s Building dependency tree... 215s Reading state information... 215s Solving dependencies... 215s Some packages could not be installed. This may mean that you have 215s requested an impossible situation or if you are using the unstable 215s distribution that some required packages have not yet been created 215s or been moved out of Incoming. 215s The following information may help to resolve the situation: 215s 215s The following packages have unmet dependencies: 216s satisfy:command-line : Depends: r-bioc-cummerbund but it is not going to be installed 216s Depends: r-cran-cluster but it is not going to be installed 216s Depends: r-cran-plyr but it is not going to be installed 216s Depends: r-cran-stringr but it is not going to be installed 216s Depends: r-bioc-genomicfeatures but it is not going to be installed 216s Depends: r-bioc-genomicranges but it is not installable 216s Depends: r-cran-rjson but it is not going to be installed 216s Depends: pkg-r-autopkgtest but it is not going to be installed 216s Depends: r-cran-cluster but it is not going to be installed 216s Depends: r-cran-stringr but it is not going to be installed 216s Depends: r-bioc-genomicfeatures but it is not going to be installed 216s Depends: r-bioc-genomicranges but it is not installable 216s Depends: r-cran-rjson but it is not going to be installed 216s E: Unable to satisfy dependencies. Reached two conflicting assignments: 216s 1. satisfy:command-line:armhf=1 is selected for install 216s 2. satisfy:command-line:armhf Depends r-bioc-genomicranges 216s but none of the choices are installable: 216s [no choices] 216s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set 216s autopkgtest [23:11:27]: @@@@@@@@@@@@@@@@@@@@ summary 216s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set