0s autopkgtest [10:20:31]: starting date and time: 2025-11-17 10:20:31+0000 0s autopkgtest [10:20:31]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [10:20:31]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wjgxdy6d/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:rasterio,src:python3-defaults --apt-upgrade python-rioxarray --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=rasterio/1.4.3-4build2 python3-defaults/3.13.7-2' -- lxd -r lxd-armhf-10.145.243.115 lxd-armhf-10.145.243.115:autopkgtest/ubuntu/resolute/armhf 20s autopkgtest [10:20:51]: testbed dpkg architecture: armhf 21s autopkgtest [10:20:52]: testbed apt version: 3.1.11 25s autopkgtest [10:20:56]: @@@@@@@@@@@@@@@@@@@@ test bed setup 27s autopkgtest [10:20:58]: testbed release detected to be: None 34s autopkgtest [10:21:05]: updating testbed package index (apt update) 36s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 36s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [87.8 kB] 36s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 36s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 36s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 36s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [881 kB] 37s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 37s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [80.3 kB] 37s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [138 kB] 37s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted armhf Packages [940 B] 37s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [541 kB] 37s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [9684 B] 37s Get:13 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.3 MB] 37s Get:14 http://ftpmaster.internal/ubuntu resolute/main Sources [1416 kB] 37s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1369 kB] 37s Get:16 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [15.0 MB] 41s Fetched 40.9 MB in 5s (8237 kB/s) 42s Reading package lists... 47s autopkgtest [10:21:18]: upgrading testbed (apt dist-upgrade and autopurge) 49s Reading package lists... 49s Building dependency tree... 49s Reading state information... 50s Calculating upgrade... 50s The following packages will be upgraded: 50s libpython3-stdlib python3 python3-minimal usbutils 51s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 51s Need to get 140 kB of archives. 51s After this operation, 0 B of additional disk space will be used. 51s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-minimal armhf 3.13.7-2 [27.8 kB] 51s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3 armhf 3.13.7-2 [23.9 kB] 51s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libpython3-stdlib armhf 3.13.7-2 [10.6 kB] 51s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf usbutils armhf 1:019-1 [77.7 kB] 51s Fetched 140 kB in 0s (347 kB/s) 51s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 51s Preparing to unpack .../python3-minimal_3.13.7-2_armhf.deb ... 51s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 51s Setting up python3-minimal (3.13.7-2) ... 52s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 52s Preparing to unpack .../python3_3.13.7-2_armhf.deb ... 52s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 52s Preparing to unpack .../libpython3-stdlib_3.13.7-2_armhf.deb ... 52s Unpacking libpython3-stdlib:armhf (3.13.7-2) over (3.13.7-1) ... 52s Preparing to unpack .../usbutils_1%3a019-1_armhf.deb ... 52s Unpacking usbutils (1:019-1) over (1:018-2) ... 52s Setting up usbutils (1:019-1) ... 52s Setting up libpython3-stdlib:armhf (3.13.7-2) ... 52s Setting up python3 (3.13.7-2) ... 52s Processing triggers for man-db (2.13.1-1) ... 55s Reading package lists... 55s Building dependency tree... 55s Reading state information... 55s Solving dependencies... 56s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s autopkgtest [10:21:28]: rebooting testbed after setup commands that affected boot 97s autopkgtest [10:22:08]: testbed running kernel: Linux 6.8.0-86-generic #87~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 29 09:26:46 UTC 2 121s autopkgtest [10:22:32]: @@@@@@@@@@@@@@@@@@@@ apt-source python-rioxarray 132s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-rioxarray 0.18.2-1 (dsc) [2498 B] 132s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-rioxarray 0.18.2-1 (tar) [4573 kB] 132s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-rioxarray 0.18.2-1 (diff) [3968 B] 133s gpgv: Signature made Fri Jan 17 18:47:50 2025 UTC 133s gpgv: using RSA key 3B70F209A5FFD68903C472C5EBF48AB2578F9812 133s gpgv: issuer "antonio.valentino@tiscali.it" 133s gpgv: Can't check signature: No public key 133s dpkg-source: warning: cannot verify inline signature for ./python-rioxarray_0.18.2-1.dsc: no acceptable signature found 133s autopkgtest [10:22:44]: testing package python-rioxarray version 0.18.2-1 135s autopkgtest [10:22:46]: build not needed 138s autopkgtest [10:22:49]: test pybuild-autopkgtest: preparing testbed 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s Solving dependencies... 140s Some packages could not be installed. This may mean that you have 140s requested an impossible situation or if you are using the unstable 140s distribution that some required packages have not yet been created 140s or been moved out of Incoming. 140s The following information may help to resolve the situation: 140s 140s The following packages have unmet dependencies: 140s satisfy:command-line : Depends: python3-rioxarray but it is not going to be installed 140s Depends: pybuild-plugin-autopkgtest but it is not going to be installed 140s Depends: debhelper-compat (= 13) 140s Depends: dh-sequence-numpy3 140s Depends: dh-sequence-python3 140s Depends: pybuild-plugin-pyproject but it is not going to be installed 140s Depends: python3-all but it is not going to be installed 140s Depends: python3-dask but it is not going to be installed 140s Depends: python3-netcdf4 but it is not going to be installed 140s Depends: python3-numpy but it is not going to be installed 140s Depends: python3-pyproj but it is not going to be installed 140s Depends: python3-rasterio but it is not going to be installed 140s Depends: python3-scipy but it is not going to be installed 140s Depends: python3-pytest but it is not going to be installed 140s Depends: python3-pytest-cov but it is not going to be installed 140s Depends: python3-pytest-timeout but it is not going to be installed 140s Depends: python3-xarray (>= 2022.3.0) but it is not going to be installed 140s Depends: build-essential but it is not going to be installed 140s E: Unable to satisfy dependencies. Reached two conflicting decisions: 140s 1. gdal-data:armhf=3.12.0+dfsg-1 is not selected for install 140s 2. gdal-data:armhf=3.12.0+dfsg-1 is selected for install because: 140s 1. satisfy:command-line:armhf=1 is selected for install 140s 2. satisfy:command-line:armhf Depends python3-rasterio 140s 3. python3-rasterio:armhf is available in versions 1.4.3-4build2, 1.4.3-2build2 140s [selected python3-rasterio:armhf=1.4.3-4build2 for install] 140s 4. python3-rasterio:armhf=1.4.3-4build2 Depends libgdal38 (>= 3.12.0) 140s 5. libgdal38:armhf Depends gdal-data (>= 3.12.0+dfsg-1) 140s For context, additional choices that could not be installed: 140s * In python3-rasterio:armhf is available in versions 1.4.3-4build2, 1.4.3-2build2: 140s - python3-rasterio:armhf=1.4.3-2build2 is not selected for install 140s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from resolute-proposed 144s Reading package lists... 144s Building dependency tree... 144s Reading state information... 145s Solving dependencies... 145s The following NEW packages will be installed: 145s autoconf automake autopoint autotools-dev build-essential cpp cpp-15 145s cpp-15-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper debugedit 145s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 145s fonts-dejavu-core fonts-dejavu-mono g++ g++-15 g++-15-arm-linux-gnueabihf 145s g++-arm-linux-gnueabihf gcc gcc-15 gcc-15-arm-linux-gnueabihf 145s gcc-arm-linux-gnueabihf gdal-data gdal-plugins gettext intltool-debian 145s libabsl20240722 libaec0 libaom3 libarchive-zip-perl libarmadillo15 145s libarpack2t64 libasan8 libavif16 libblas3 libblosc1 libc-dev-bin libc6-dev 145s libcc1-0 libcfitsio10t64 libcrypt-dev libdav1d7 libde265-0 libdebhelper-perl 145s libdeflate0 libdw1t64 libfile-stripnondeterminism-perl libfontconfig1 145s libfreetype6 libfreexl1 libfyba0t64 libgav1-1 libgcc-15-dev libgdal38 145s libgeos-c1t64 libgeos3.14.1 libgeotiff5 libgfortran5 libgif7 libgomp1 145s libgpgmepp6t64 libhdf4-0 libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 145s libheif-plugin-libde265 libheif1 libisl23 libjbig0 libjpeg-turbo8 libjpeg8 145s libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen 145s libjs-jquery-metadata libjs-jquery-tablesorter 145s libjs-jquery-throttle-debounce libjxl0.11 libkmlbase1t64 libkmldom1t64 145s libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 libminizip1t64 145s libmpc3 libmuparser2v5 libmysqlclient24 libnetcdf22 libodbc2 libodbcinst2 145s libopenjp2-7 libpoppler147 libpq5 libproj25 libpython3.14-minimal 145s libpython3.14-stdlib libqhull-r8.0 librav1e0.7 librttopo1 libsharpyuv0 145s libsnappy1v5 libspatialite8t64 libstdc++-15-dev libsuperlu7 libsvtav1enc2 145s libsz2 libtiff6 libtool libubsan1 liburiparser1 libwebp7 libxerces-c3.2t64 145s libyuv0 linux-libc-dev m4 mysql-common po-debconf proj-data 145s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python3-affine 145s python3-all python3-build python3-cftime python3-click python3-cligj 145s python3-cloudpickle python3-coverage python3-dask python3-decorator 145s python3-fsspec python3-iniconfig python3-installer python3-locket 145s python3-netcdf4 python3-numpy python3-numpy-dev python3-pandas 145s python3-pandas-lib python3-partd python3-pluggy python3-pyproj 145s python3-pyproject-hooks python3-pytest python3-pytest-cov 145s python3-pytest-timeout python3-pytz python3-rasterio python3-rioxarray 145s python3-scipy python3-toolz python3-wheel python3-xarray python3.14 145s python3.14-minimal rpcsvc-proto unixodbc-common 145s The following packages will be upgraded: 145s gcc-15-base libatomic1 libcrypt1 libgcc-s1 libstdc++6 145s 5 upgraded, 163 newly installed, 0 to remove and 34 not upgraded. 145s Need to get 150 MB of archives. 145s After this operation, 527 MB of additional disk space will be used. 145s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-numpy-dev armhf 1:2.3.4+ds-3ubuntu1 [140 kB] 146s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf gcc-15-base armhf 15.2.0-8ubuntu1 [58.6 kB] 146s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libgcc-s1 armhf 15.2.0-8ubuntu1 [40.5 kB] 146s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libatomic1 armhf 15.2.0-8ubuntu1 [7826 B] 146s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libstdc++6 armhf 15.2.0-8ubuntu1 [731 kB] 146s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libblas3 armhf 3.12.1-7 [133 kB] 146s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libgfortran5 armhf 15.2.0-8ubuntu1 [334 kB] 146s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf liblapack3 armhf 3.12.1-7 [2091 kB] 146s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-numpy armhf 1:2.3.4+ds-3ubuntu1 [4726 kB] 146s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.14-minimal armhf 3.14.0-4 [892 kB] 146s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14-minimal armhf 3.14.0-4 [2146 kB] 147s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libcrypt1 armhf 1:4.5.1-1 [98.9 kB] 147s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf m4 armhf 1.4.20-2 [212 kB] 147s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf autoconf all 2.72-3.1ubuntu1 [384 kB] 147s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf autotools-dev all 20240727.1 [43.4 kB] 147s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf automake all 1:1.18.1-3 [582 kB] 147s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf autopoint all 0.23.2-1 [620 kB] 147s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libc-dev-bin armhf 2.42-2ubuntu2 [21.8 kB] 147s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf linux-libc-dev armhf 6.17.0-6.6 [1772 kB] 147s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libcrypt-dev armhf 1:4.5.1-1 [128 kB] 147s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf rpcsvc-proto armhf 1.4.3-1 [62.3 kB] 147s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf libc6-dev armhf 2.42-2ubuntu2 [1416 kB] 147s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libisl23 armhf 0.27-1 [546 kB] 147s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf libmpc3 armhf 1.3.1-2 [47.0 kB] 147s Get:25 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf cpp-15-arm-linux-gnueabihf armhf 15.2.0-8ubuntu1 [10.1 MB] 148s Get:26 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf cpp-15 armhf 15.2.0-8ubuntu1 [1030 B] 148s Get:27 http://ftpmaster.internal/ubuntu resolute/main armhf cpp-arm-linux-gnueabihf armhf 4:15.2.0-4ubuntu1 [5756 B] 148s Get:28 http://ftpmaster.internal/ubuntu resolute/main armhf cpp armhf 4:15.2.0-4ubuntu1 [22.4 kB] 148s Get:29 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libcc1-0 armhf 15.2.0-8ubuntu1 [43.5 kB] 148s Get:30 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libgomp1 armhf 15.2.0-8ubuntu1 [129 kB] 148s Get:31 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libasan8 armhf 15.2.0-8ubuntu1 [2951 kB] 148s Get:32 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libubsan1 armhf 15.2.0-8ubuntu1 [1187 kB] 148s Get:33 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libgcc-15-dev armhf 15.2.0-8ubuntu1 [898 kB] 148s Get:34 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf gcc-15-arm-linux-gnueabihf armhf 15.2.0-8ubuntu1 [19.5 MB] 149s Get:35 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf gcc-15 armhf 15.2.0-8ubuntu1 [494 kB] 149s Get:36 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-arm-linux-gnueabihf armhf 4:15.2.0-4ubuntu1 [1220 B] 149s Get:37 http://ftpmaster.internal/ubuntu resolute/main armhf gcc armhf 4:15.2.0-4ubuntu1 [5022 B] 149s Get:38 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libstdc++-15-dev armhf 15.2.0-8ubuntu1 [2637 kB] 149s Get:39 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf g++-15-arm-linux-gnueabihf armhf 15.2.0-8ubuntu1 [11.4 MB] 150s Get:40 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf g++-15 armhf 15.2.0-8ubuntu1 [24.1 kB] 150s Get:41 http://ftpmaster.internal/ubuntu resolute/main armhf g++-arm-linux-gnueabihf armhf 4:15.2.0-4ubuntu1 [968 B] 150s Get:42 http://ftpmaster.internal/ubuntu resolute/main armhf g++ armhf 4:15.2.0-4ubuntu1 [1086 B] 150s Get:43 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf build-essential armhf 12.12ubuntu2 [5256 B] 150s Get:44 http://ftpmaster.internal/ubuntu resolute/main armhf libdebhelper-perl all 13.24.2ubuntu1 [95.7 kB] 150s Get:45 http://ftpmaster.internal/ubuntu resolute/main armhf libtool all 2.5.4-7 [169 kB] 150s Get:46 http://ftpmaster.internal/ubuntu resolute/main armhf dh-autoreconf all 21 [12.5 kB] 150s Get:47 http://ftpmaster.internal/ubuntu resolute/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 150s Get:48 http://ftpmaster.internal/ubuntu resolute/main armhf libfile-stripnondeterminism-perl all 1.15.0-1 [20.5 kB] 150s Get:49 http://ftpmaster.internal/ubuntu resolute/main armhf dh-strip-nondeterminism all 1.15.0-1 [5090 B] 150s Get:50 http://ftpmaster.internal/ubuntu resolute/main armhf libdw1t64 armhf 0.194-1 [254 kB] 150s Get:51 http://ftpmaster.internal/ubuntu resolute/main armhf debugedit armhf 1:5.2-3 [48.9 kB] 150s Get:52 http://ftpmaster.internal/ubuntu resolute/main armhf dwz armhf 0.16-2 [114 kB] 150s Get:53 http://ftpmaster.internal/ubuntu resolute/main armhf gettext armhf 0.23.2-1 [1059 kB] 150s Get:54 http://ftpmaster.internal/ubuntu resolute/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 150s Get:55 http://ftpmaster.internal/ubuntu resolute/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 150s Get:56 http://ftpmaster.internal/ubuntu resolute/main armhf debhelper all 13.24.2ubuntu1 [896 kB] 150s Get:57 http://ftpmaster.internal/ubuntu resolute/universe armhf dh-python all 6.20250414 [119 kB] 150s Get:58 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 150s Get:59 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 150s Get:60 http://ftpmaster.internal/ubuntu resolute/main armhf fontconfig-config armhf 2.15.0-2.3ubuntu1 [38.1 kB] 150s Get:61 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf gdal-data all 3.12.0+dfsg-1 [278 kB] 150s Get:62 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf gdal-plugins armhf 3.12.0+dfsg-1 [26.7 kB] 150s Get:63 http://ftpmaster.internal/ubuntu resolute/main armhf libabsl20240722 armhf 20240722.0-4ubuntu1 [500 kB] 150s Get:64 http://ftpmaster.internal/ubuntu resolute/universe armhf libaec0 armhf 1.1.4-2 [21.1 kB] 150s Get:65 http://ftpmaster.internal/ubuntu resolute/main armhf libaom3 armhf 3.13.1-2 [1258 kB] 150s Get:66 http://ftpmaster.internal/ubuntu resolute/universe armhf libarpack2t64 armhf 3.9.1-6 [88.7 kB] 150s Get:67 http://ftpmaster.internal/ubuntu resolute/universe armhf libsuperlu7 armhf 7.0.1+dfsg1-2 [157 kB] 150s Get:68 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf libarmadillo15 armhf 1:15.2.1+dfsg-2 [106 kB] 150s Get:69 http://ftpmaster.internal/ubuntu resolute/universe armhf libdav1d7 armhf 1.5.2-1 [299 kB] 150s Get:70 http://ftpmaster.internal/ubuntu resolute/universe armhf libgav1-1 armhf 0.19.0-3build1 [328 kB] 150s Get:71 http://ftpmaster.internal/ubuntu resolute/universe armhf librav1e0.7 armhf 0.7.1-9 [690 kB] 150s Get:72 http://ftpmaster.internal/ubuntu resolute/universe armhf libsvtav1enc2 armhf 2.3.0+dfsg-1 [1080 kB] 150s Get:73 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg-turbo8 armhf 2.1.5-4ubuntu2 [127 kB] 150s Get:74 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 150s Get:75 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libyuv0 armhf 0.0.1919.20250919-1 [94.0 kB] 150s Get:76 http://ftpmaster.internal/ubuntu resolute/universe armhf libavif16 armhf 1.3.0-1ubuntu1 [101 kB] 150s Get:77 http://ftpmaster.internal/ubuntu resolute/main armhf libsnappy1v5 armhf 1.2.2-2 [28.6 kB] 150s Get:78 http://ftpmaster.internal/ubuntu resolute/universe armhf libblosc1 armhf 1.21.5+ds-2 [23.7 kB] 150s Get:79 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf libcfitsio10t64 armhf 4.6.3-1 [505 kB] 151s Get:80 http://ftpmaster.internal/ubuntu resolute/main armhf libde265-0 armhf 1.0.16-1 [158 kB] 151s Get:81 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate0 armhf 1.23-2 [38.7 kB] 151s Get:82 http://ftpmaster.internal/ubuntu resolute/main armhf libfreetype6 armhf 2.13.3+dfsg-1build1 [334 kB] 151s Get:83 http://ftpmaster.internal/ubuntu resolute/main armhf libfontconfig1 armhf 2.15.0-2.3ubuntu1 [114 kB] 151s Get:84 http://ftpmaster.internal/ubuntu resolute/universe armhf libfyba0t64 armhf 4.1.1-11build1 [109 kB] 151s Get:85 http://ftpmaster.internal/ubuntu resolute/universe armhf libminizip1t64 armhf 1:1.3.dfsg+really1.3.1-1ubuntu2 [20.4 kB] 151s Get:86 http://ftpmaster.internal/ubuntu resolute/universe armhf libfreexl1 armhf 2.0.0-1build2 [37.6 kB] 151s Get:87 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf libgeos3.14.1 armhf 3.14.1-1 [993 kB] 151s Get:88 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf libgeos-c1t64 armhf 3.14.1-1 [114 kB] 151s Get:89 http://ftpmaster.internal/ubuntu resolute/universe armhf proj-data all 9.7.0-1 [7970 kB] 151s Get:90 http://ftpmaster.internal/ubuntu resolute/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 151s Get:91 http://ftpmaster.internal/ubuntu resolute/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 151s Get:92 http://ftpmaster.internal/ubuntu resolute/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 151s Get:93 http://ftpmaster.internal/ubuntu resolute/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 151s Get:94 http://ftpmaster.internal/ubuntu resolute/main armhf libtiff6 armhf 4.7.0-3ubuntu3 [188 kB] 151s Get:95 http://ftpmaster.internal/ubuntu resolute/universe armhf libproj25 armhf 9.7.0-1 [1362 kB] 151s Get:96 http://ftpmaster.internal/ubuntu resolute/universe armhf libgeotiff5 armhf 1.7.4-1 [52.5 kB] 151s Get:97 http://ftpmaster.internal/ubuntu resolute/main armhf libgif7 armhf 5.2.2-1ubuntu2 [32.5 kB] 151s Get:98 http://ftpmaster.internal/ubuntu resolute/universe armhf libsz2 armhf 1.1.4-2 [5322 B] 151s Get:99 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf4-0 armhf 4.3.0-1 [282 kB] 151s Get:100 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-310 armhf 1.14.5+repack-4 [1422 kB] 151s Get:101 http://ftpmaster.internal/ubuntu resolute/main armhf libheif-plugin-aomdec armhf 1.20.2-2build1 [11.5 kB] 151s Get:102 http://ftpmaster.internal/ubuntu resolute/main armhf libheif-plugin-libde265 armhf 1.20.2-2build1 [13.2 kB] 152s Get:103 http://ftpmaster.internal/ubuntu resolute/main armhf libheif1 armhf 1.20.2-2build1 [556 kB] 152s Get:104 http://ftpmaster.internal/ubuntu resolute/main armhf liblcms2-2 armhf 2.17-1 [139 kB] 152s Get:105 http://ftpmaster.internal/ubuntu resolute/main armhf libjxl0.11 armhf 0.11.1-6ubuntu1 [1108 kB] 152s Get:106 http://ftpmaster.internal/ubuntu resolute/universe armhf liburiparser1 armhf 0.9.8+dfsg-2 [30.3 kB] 152s Get:107 http://ftpmaster.internal/ubuntu resolute/universe armhf libkmlbase1t64 armhf 1.3.0-13 [42.4 kB] 152s Get:108 http://ftpmaster.internal/ubuntu resolute/universe armhf libkmldom1t64 armhf 1.3.0-13 [146 kB] 152s Get:109 http://ftpmaster.internal/ubuntu resolute/universe armhf libkmlengine1t64 armhf 1.3.0-13 [70.6 kB] 152s Get:110 http://ftpmaster.internal/ubuntu resolute/universe armhf libmuparser2v5 armhf 2.3.4-2 [139 kB] 152s Get:111 http://ftpmaster.internal/ubuntu resolute/main armhf mysql-common all 5.8+1.1.1ubuntu1 [6922 B] 152s Get:112 http://ftpmaster.internal/ubuntu resolute/main armhf libmysqlclient24 armhf 8.4.7-0ubuntu2 [1265 kB] 153s Get:113 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-4 [58.7 kB] 153s Get:114 http://ftpmaster.internal/ubuntu resolute/universe armhf libnetcdf22 armhf 1:4.9.3-1build1 [511 kB] 153s Get:115 http://ftpmaster.internal/ubuntu resolute/main armhf libltdl7 armhf 2.5.4-7 [40.0 kB] 153s Get:116 http://ftpmaster.internal/ubuntu resolute/main armhf libodbc2 armhf 2.3.14-1 [147 kB] 153s Get:117 http://ftpmaster.internal/ubuntu resolute/main armhf unixodbc-common all 2.3.14-1 [8792 B] 153s Get:118 http://ftpmaster.internal/ubuntu resolute/main armhf libodbcinst2 armhf 2.3.14-1 [31.4 kB] 153s Get:119 http://ftpmaster.internal/ubuntu resolute/main armhf libopenjp2-7 armhf 2.5.3-2.1 [174 kB] 153s Get:120 http://ftpmaster.internal/ubuntu resolute/main armhf libgpgmepp6t64 armhf 1.24.2-3ubuntu2 [115 kB] 153s Get:121 http://ftpmaster.internal/ubuntu resolute/main armhf libpoppler147 armhf 25.03.0-11.1 [1046 kB] 153s Get:122 http://ftpmaster.internal/ubuntu resolute/main armhf libpq5 armhf 18.1-1 [258 kB] 154s Get:123 http://ftpmaster.internal/ubuntu resolute/universe armhf libqhull-r8.0 armhf 2020.2-7 [174 kB] 154s Get:124 http://ftpmaster.internal/ubuntu resolute/universe armhf librttopo1 armhf 1.1.0-4 [160 kB] 154s Get:125 http://ftpmaster.internal/ubuntu resolute/universe armhf libspatialite8t64 armhf 5.1.0-3ubuntu1 [2007 kB] 154s Get:126 http://ftpmaster.internal/ubuntu resolute/universe armhf libxerces-c3.2t64 armhf 3.2.4+debian-1.3build1 [819 kB] 154s Get:127 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf libgdal38 armhf 3.12.0+dfsg-1 [10.2 MB] 157s Get:128 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 157s Get:129 http://ftpmaster.internal/ubuntu resolute/universe armhf libjs-jquery-metadata all 12-4 [6582 B] 157s Get:130 http://ftpmaster.internal/ubuntu resolute/universe armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 157s Get:131 http://ftpmaster.internal/ubuntu resolute/universe armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 157s Get:132 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.14-stdlib armhf 3.14.0-4 [2270 kB] 157s Get:133 http://ftpmaster.internal/ubuntu resolute/universe armhf pybuild-plugin-autopkgtest all 6.20250414 [1746 B] 157s Get:134 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 157s Get:135 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-wheel all 0.46.1-2 [22.1 kB] 157s Get:136 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-build all 1.2.2-4 [31.0 kB] 157s Get:137 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 157s Get:138 http://ftpmaster.internal/ubuntu resolute/universe armhf pybuild-plugin-pyproject all 6.20250414 [1728 B] 157s Get:139 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-affine all 2.4.0-2 [14.0 kB] 157s Get:140 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14 armhf 3.14.0-4 [805 kB] 157s Get:141 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-all armhf 3.13.7-2 [890 B] 157s Get:142 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-cftime armhf 1.6.5-1 [506 kB] 157s Get:143 http://ftpmaster.internal/ubuntu resolute/main armhf python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 157s Get:144 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-cligj all 0.7.2-3 [8006 B] 157s Get:145 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-cloudpickle all 3.1.1-1 [22.4 kB] 157s Get:146 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-coverage armhf 7.8.2+dfsg1-1 [156 kB] 157s Get:147 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-fsspec all 2025.3.2-1ubuntu1 [217 kB] 157s Get:148 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-toolz all 1.0.0-2 [45.0 kB] 157s Get:149 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-locket all 1.0.0-2 [5872 B] 157s Get:150 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-partd all 1.4.2-1 [15.7 kB] 157s Get:151 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-dask all 2024.12.1+dfsg-2 [875 kB] 158s Get:152 http://ftpmaster.internal/ubuntu resolute/main armhf python3-decorator all 5.2.1-2 [28.1 kB] 158s Get:153 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-iniconfig all 2.1.0-1 [6840 B] 158s Get:154 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-netcdf4 armhf 1.7.3-1 [862 kB] 158s Get:155 http://ftpmaster.internal/ubuntu resolute/main armhf python3-pytz all 2025.2-4 [32.3 kB] 158s Get:156 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pandas-lib armhf 2.3.3+dfsg-1ubuntu1 [8020 kB] 159s Get:157 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pandas all 2.3.3+dfsg-1ubuntu1 [2948 kB] 160s Get:158 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pluggy all 1.6.0-1 [21.0 kB] 160s Get:159 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pyproj armhf 3.7.2-1 [603 kB] 160s Get:160 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-pytest all 8.4.2-1 [268 kB] 160s Get:161 http://ftpmaster.internal/ubuntu resolute/universe armhf libjs-jquery-hotkeys all 0.2.0-1 [13.3 kB] 160s Get:162 http://ftpmaster.internal/ubuntu resolute/universe armhf libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 160s Get:163 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pytest-cov all 5.0.0-1 [21.3 kB] 160s Get:164 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-pytest-timeout all 2.4.0-2 [22.5 kB] 160s Get:165 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-rasterio armhf 1.4.3-4build2 [1788 kB] 160s Get:166 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-xarray all 2025.03.1-8 [831 kB] 161s Get:167 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-scipy armhf 1.16.3-1 [18.2 MB] 165s Get:168 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-rioxarray all 0.19.0-1 [1393 kB] 166s Fetched 150 MB in 20s (7616 kB/s) 166s Selecting previously unselected package python3-numpy-dev:armhf. 166s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 166s Preparing to unpack .../python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_armhf.deb ... 166s Unpacking python3-numpy-dev:armhf (1:2.3.4+ds-3ubuntu1) ... 166s Preparing to unpack .../gcc-15-base_15.2.0-8ubuntu1_armhf.deb ... 166s Unpacking gcc-15-base:armhf (15.2.0-8ubuntu1) over (15.2.0-7ubuntu1) ... 166s Setting up gcc-15-base:armhf (15.2.0-8ubuntu1) ... 166s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65963 files and directories currently installed.) 166s Preparing to unpack .../libgcc-s1_15.2.0-8ubuntu1_armhf.deb ... 166s Unpacking libgcc-s1:armhf (15.2.0-8ubuntu1) over (15.2.0-7ubuntu1) ... 166s Setting up libgcc-s1:armhf (15.2.0-8ubuntu1) ... 166s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65963 files and directories currently installed.) 166s Preparing to unpack .../libatomic1_15.2.0-8ubuntu1_armhf.deb ... 166s Unpacking libatomic1:armhf (15.2.0-8ubuntu1) over (15.2.0-7ubuntu1) ... 166s Preparing to unpack .../libstdc++6_15.2.0-8ubuntu1_armhf.deb ... 166s Unpacking libstdc++6:armhf (15.2.0-8ubuntu1) over (15.2.0-7ubuntu1) ... 166s Setting up libstdc++6:armhf (15.2.0-8ubuntu1) ... 166s Selecting previously unselected package libblas3:armhf. 166s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65963 files and directories currently installed.) 166s Preparing to unpack .../0-libblas3_3.12.1-7_armhf.deb ... 166s Unpacking libblas3:armhf (3.12.1-7) ... 166s Selecting previously unselected package libgfortran5:armhf. 166s Preparing to unpack .../1-libgfortran5_15.2.0-8ubuntu1_armhf.deb ... 166s Unpacking libgfortran5:armhf (15.2.0-8ubuntu1) ... 166s Selecting previously unselected package liblapack3:armhf. 166s Preparing to unpack .../2-liblapack3_3.12.1-7_armhf.deb ... 166s Unpacking liblapack3:armhf (3.12.1-7) ... 166s Selecting previously unselected package python3-numpy. 166s Preparing to unpack .../3-python3-numpy_1%3a2.3.4+ds-3ubuntu1_armhf.deb ... 166s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 167s Selecting previously unselected package libpython3.14-minimal:armhf. 167s Preparing to unpack .../4-libpython3.14-minimal_3.14.0-4_armhf.deb ... 167s Unpacking libpython3.14-minimal:armhf (3.14.0-4) ... 167s Selecting previously unselected package python3.14-minimal. 167s Preparing to unpack .../5-python3.14-minimal_3.14.0-4_armhf.deb ... 167s Unpacking python3.14-minimal (3.14.0-4) ... 167s Preparing to unpack .../6-libcrypt1_1%3a4.5.1-1_armhf.deb ... 167s Unpacking libcrypt1:armhf (1:4.5.1-1) over (1:4.4.38-1build1) ... 167s Setting up libcrypt1:armhf (1:4.5.1-1) ... 167s Selecting previously unselected package m4. 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 67292 files and directories currently installed.) 167s Preparing to unpack .../000-m4_1.4.20-2_armhf.deb ... 167s Unpacking m4 (1.4.20-2) ... 167s Selecting previously unselected package autoconf. 167s Preparing to unpack .../001-autoconf_2.72-3.1ubuntu1_all.deb ... 167s Unpacking autoconf (2.72-3.1ubuntu1) ... 167s Selecting previously unselected package autotools-dev. 167s Preparing to unpack .../002-autotools-dev_20240727.1_all.deb ... 167s Unpacking autotools-dev (20240727.1) ... 167s Selecting previously unselected package automake. 167s Preparing to unpack .../003-automake_1%3a1.18.1-3_all.deb ... 167s Unpacking automake (1:1.18.1-3) ... 167s Selecting previously unselected package autopoint. 167s Preparing to unpack .../004-autopoint_0.23.2-1_all.deb ... 167s Unpacking autopoint (0.23.2-1) ... 167s Selecting previously unselected package libc-dev-bin. 167s Preparing to unpack .../005-libc-dev-bin_2.42-2ubuntu2_armhf.deb ... 167s Unpacking libc-dev-bin (2.42-2ubuntu2) ... 167s Selecting previously unselected package linux-libc-dev:armhf. 167s Preparing to unpack .../006-linux-libc-dev_6.17.0-6.6_armhf.deb ... 167s Unpacking linux-libc-dev:armhf (6.17.0-6.6) ... 167s Selecting previously unselected package libcrypt-dev:armhf. 167s Preparing to unpack .../007-libcrypt-dev_1%3a4.5.1-1_armhf.deb ... 167s Unpacking libcrypt-dev:armhf (1:4.5.1-1) ... 167s Selecting previously unselected package rpcsvc-proto. 167s Preparing to unpack .../008-rpcsvc-proto_1.4.3-1_armhf.deb ... 167s Unpacking rpcsvc-proto (1.4.3-1) ... 167s Selecting previously unselected package libc6-dev:armhf. 167s Preparing to unpack .../009-libc6-dev_2.42-2ubuntu2_armhf.deb ... 167s Unpacking libc6-dev:armhf (2.42-2ubuntu2) ... 167s Selecting previously unselected package libisl23:armhf. 167s Preparing to unpack .../010-libisl23_0.27-1_armhf.deb ... 167s Unpacking libisl23:armhf (0.27-1) ... 168s Selecting previously unselected package libmpc3:armhf. 168s Preparing to unpack .../011-libmpc3_1.3.1-2_armhf.deb ... 168s Unpacking libmpc3:armhf (1.3.1-2) ... 168s Selecting previously unselected package cpp-15-arm-linux-gnueabihf. 168s Preparing to unpack .../012-cpp-15-arm-linux-gnueabihf_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking cpp-15-arm-linux-gnueabihf (15.2.0-8ubuntu1) ... 168s Selecting previously unselected package cpp-15. 168s Preparing to unpack .../013-cpp-15_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking cpp-15 (15.2.0-8ubuntu1) ... 168s Selecting previously unselected package cpp-arm-linux-gnueabihf. 168s Preparing to unpack .../014-cpp-arm-linux-gnueabihf_4%3a15.2.0-4ubuntu1_armhf.deb ... 168s Unpacking cpp-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 168s Selecting previously unselected package cpp. 168s Preparing to unpack .../015-cpp_4%3a15.2.0-4ubuntu1_armhf.deb ... 168s Unpacking cpp (4:15.2.0-4ubuntu1) ... 168s Selecting previously unselected package libcc1-0:armhf. 168s Preparing to unpack .../016-libcc1-0_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking libcc1-0:armhf (15.2.0-8ubuntu1) ... 168s Selecting previously unselected package libgomp1:armhf. 168s Preparing to unpack .../017-libgomp1_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking libgomp1:armhf (15.2.0-8ubuntu1) ... 168s Selecting previously unselected package libasan8:armhf. 168s Preparing to unpack .../018-libasan8_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking libasan8:armhf (15.2.0-8ubuntu1) ... 168s Selecting previously unselected package libubsan1:armhf. 168s Preparing to unpack .../019-libubsan1_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking libubsan1:armhf (15.2.0-8ubuntu1) ... 168s Selecting previously unselected package libgcc-15-dev:armhf. 168s Preparing to unpack .../020-libgcc-15-dev_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking libgcc-15-dev:armhf (15.2.0-8ubuntu1) ... 168s Selecting previously unselected package gcc-15-arm-linux-gnueabihf. 168s Preparing to unpack .../021-gcc-15-arm-linux-gnueabihf_15.2.0-8ubuntu1_armhf.deb ... 168s Unpacking gcc-15-arm-linux-gnueabihf (15.2.0-8ubuntu1) ... 169s Selecting previously unselected package gcc-15. 169s Preparing to unpack .../022-gcc-15_15.2.0-8ubuntu1_armhf.deb ... 169s Unpacking gcc-15 (15.2.0-8ubuntu1) ... 169s Selecting previously unselected package gcc-arm-linux-gnueabihf. 169s Preparing to unpack .../023-gcc-arm-linux-gnueabihf_4%3a15.2.0-4ubuntu1_armhf.deb ... 169s Unpacking gcc-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 169s Selecting previously unselected package gcc. 169s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_armhf.deb ... 169s Unpacking gcc (4:15.2.0-4ubuntu1) ... 169s Selecting previously unselected package libstdc++-15-dev:armhf. 169s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-8ubuntu1_armhf.deb ... 169s Unpacking libstdc++-15-dev:armhf (15.2.0-8ubuntu1) ... 169s Selecting previously unselected package g++-15-arm-linux-gnueabihf. 169s Preparing to unpack .../026-g++-15-arm-linux-gnueabihf_15.2.0-8ubuntu1_armhf.deb ... 169s Unpacking g++-15-arm-linux-gnueabihf (15.2.0-8ubuntu1) ... 169s Selecting previously unselected package g++-15. 169s Preparing to unpack .../027-g++-15_15.2.0-8ubuntu1_armhf.deb ... 169s Unpacking g++-15 (15.2.0-8ubuntu1) ... 169s Selecting previously unselected package g++-arm-linux-gnueabihf. 169s Preparing to unpack .../028-g++-arm-linux-gnueabihf_4%3a15.2.0-4ubuntu1_armhf.deb ... 169s Unpacking g++-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 169s Selecting previously unselected package g++. 169s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_armhf.deb ... 169s Unpacking g++ (4:15.2.0-4ubuntu1) ... 169s Selecting previously unselected package build-essential. 169s Preparing to unpack .../030-build-essential_12.12ubuntu2_armhf.deb ... 169s Unpacking build-essential (12.12ubuntu2) ... 169s Selecting previously unselected package libdebhelper-perl. 169s Preparing to unpack .../031-libdebhelper-perl_13.24.2ubuntu1_all.deb ... 169s Unpacking libdebhelper-perl (13.24.2ubuntu1) ... 169s Selecting previously unselected package libtool. 169s Preparing to unpack .../032-libtool_2.5.4-7_all.deb ... 169s Unpacking libtool (2.5.4-7) ... 169s Selecting previously unselected package dh-autoreconf. 169s Preparing to unpack .../033-dh-autoreconf_21_all.deb ... 169s Unpacking dh-autoreconf (21) ... 169s Selecting previously unselected package libarchive-zip-perl. 170s Preparing to unpack .../034-libarchive-zip-perl_1.68-1_all.deb ... 170s Unpacking libarchive-zip-perl (1.68-1) ... 170s Selecting previously unselected package libfile-stripnondeterminism-perl. 170s Preparing to unpack .../035-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... 170s Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... 170s Selecting previously unselected package dh-strip-nondeterminism. 170s Preparing to unpack .../036-dh-strip-nondeterminism_1.15.0-1_all.deb ... 170s Unpacking dh-strip-nondeterminism (1.15.0-1) ... 170s Selecting previously unselected package libdw1t64:armhf. 170s Preparing to unpack .../037-libdw1t64_0.194-1_armhf.deb ... 170s Unpacking libdw1t64:armhf (0.194-1) ... 170s Selecting previously unselected package debugedit. 170s Preparing to unpack .../038-debugedit_1%3a5.2-3_armhf.deb ... 170s Unpacking debugedit (1:5.2-3) ... 170s Selecting previously unselected package dwz. 170s Preparing to unpack .../039-dwz_0.16-2_armhf.deb ... 170s Unpacking dwz (0.16-2) ... 170s Selecting previously unselected package gettext. 170s Preparing to unpack .../040-gettext_0.23.2-1_armhf.deb ... 170s Unpacking gettext (0.23.2-1) ... 170s Selecting previously unselected package intltool-debian. 170s Preparing to unpack .../041-intltool-debian_0.35.0+20060710.6_all.deb ... 170s Unpacking intltool-debian (0.35.0+20060710.6) ... 170s Selecting previously unselected package po-debconf. 170s Preparing to unpack .../042-po-debconf_1.0.21+nmu1_all.deb ... 170s Unpacking po-debconf (1.0.21+nmu1) ... 170s Selecting previously unselected package debhelper. 170s Preparing to unpack .../043-debhelper_13.24.2ubuntu1_all.deb ... 170s Unpacking debhelper (13.24.2ubuntu1) ... 170s Selecting previously unselected package dh-python. 170s Preparing to unpack .../044-dh-python_6.20250414_all.deb ... 170s Unpacking dh-python (6.20250414) ... 170s Selecting previously unselected package fonts-dejavu-mono. 170s Preparing to unpack .../045-fonts-dejavu-mono_2.37-8_all.deb ... 170s Unpacking fonts-dejavu-mono (2.37-8) ... 170s Selecting previously unselected package fonts-dejavu-core. 170s Preparing to unpack .../046-fonts-dejavu-core_2.37-8_all.deb ... 170s Unpacking fonts-dejavu-core (2.37-8) ... 170s Selecting previously unselected package fontconfig-config. 170s Preparing to unpack .../047-fontconfig-config_2.15.0-2.3ubuntu1_armhf.deb ... 171s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 171s Selecting previously unselected package gdal-data. 171s Preparing to unpack .../048-gdal-data_3.12.0+dfsg-1_all.deb ... 171s Unpacking gdal-data (3.12.0+dfsg-1) ... 171s Selecting previously unselected package gdal-plugins:armhf. 171s Preparing to unpack .../049-gdal-plugins_3.12.0+dfsg-1_armhf.deb ... 171s Unpacking gdal-plugins:armhf (3.12.0+dfsg-1) ... 171s Selecting previously unselected package libabsl20240722:armhf. 171s Preparing to unpack .../050-libabsl20240722_20240722.0-4ubuntu1_armhf.deb ... 171s Unpacking libabsl20240722:armhf (20240722.0-4ubuntu1) ... 171s Selecting previously unselected package libaec0:armhf. 171s Preparing to unpack .../051-libaec0_1.1.4-2_armhf.deb ... 171s Unpacking libaec0:armhf (1.1.4-2) ... 171s Selecting previously unselected package libaom3:armhf. 171s Preparing to unpack .../052-libaom3_3.13.1-2_armhf.deb ... 171s Unpacking libaom3:armhf (3.13.1-2) ... 171s Selecting previously unselected package libarpack2t64:armhf. 171s Preparing to unpack .../053-libarpack2t64_3.9.1-6_armhf.deb ... 171s Unpacking libarpack2t64:armhf (3.9.1-6) ... 171s Selecting previously unselected package libsuperlu7:armhf. 171s Preparing to unpack .../054-libsuperlu7_7.0.1+dfsg1-2_armhf.deb ... 171s Unpacking libsuperlu7:armhf (7.0.1+dfsg1-2) ... 171s Selecting previously unselected package libarmadillo15. 171s Preparing to unpack .../055-libarmadillo15_1%3a15.2.1+dfsg-2_armhf.deb ... 171s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 171s Selecting previously unselected package libdav1d7:armhf. 171s Preparing to unpack .../056-libdav1d7_1.5.2-1_armhf.deb ... 171s Unpacking libdav1d7:armhf (1.5.2-1) ... 171s Selecting previously unselected package libgav1-1:armhf. 171s Preparing to unpack .../057-libgav1-1_0.19.0-3build1_armhf.deb ... 171s Unpacking libgav1-1:armhf (0.19.0-3build1) ... 171s Selecting previously unselected package librav1e0.7:armhf. 171s Preparing to unpack .../058-librav1e0.7_0.7.1-9_armhf.deb ... 171s Unpacking librav1e0.7:armhf (0.7.1-9) ... 171s Selecting previously unselected package libsvtav1enc2:armhf. 171s Preparing to unpack .../059-libsvtav1enc2_2.3.0+dfsg-1_armhf.deb ... 171s Unpacking libsvtav1enc2:armhf (2.3.0+dfsg-1) ... 171s Selecting previously unselected package libjpeg-turbo8:armhf. 171s Preparing to unpack .../060-libjpeg-turbo8_2.1.5-4ubuntu2_armhf.deb ... 171s Unpacking libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 171s Selecting previously unselected package libjpeg8:armhf. 171s Preparing to unpack .../061-libjpeg8_8c-2ubuntu11_armhf.deb ... 171s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 171s Selecting previously unselected package libyuv0:armhf. 171s Preparing to unpack .../062-libyuv0_0.0.1919.20250919-1_armhf.deb ... 171s Unpacking libyuv0:armhf (0.0.1919.20250919-1) ... 171s Selecting previously unselected package libavif16:armhf. 171s Preparing to unpack .../063-libavif16_1.3.0-1ubuntu1_armhf.deb ... 171s Unpacking libavif16:armhf (1.3.0-1ubuntu1) ... 171s Selecting previously unselected package libsnappy1v5:armhf. 171s Preparing to unpack .../064-libsnappy1v5_1.2.2-2_armhf.deb ... 171s Unpacking libsnappy1v5:armhf (1.2.2-2) ... 171s Selecting previously unselected package libblosc1:armhf. 171s Preparing to unpack .../065-libblosc1_1.21.5+ds-2_armhf.deb ... 171s Unpacking libblosc1:armhf (1.21.5+ds-2) ... 171s Selecting previously unselected package libcfitsio10t64:armhf. 171s Preparing to unpack .../066-libcfitsio10t64_4.6.3-1_armhf.deb ... 171s Unpacking libcfitsio10t64:armhf (4.6.3-1) ... 171s Selecting previously unselected package libde265-0:armhf. 171s Preparing to unpack .../067-libde265-0_1.0.16-1_armhf.deb ... 171s Unpacking libde265-0:armhf (1.0.16-1) ... 171s Selecting previously unselected package libdeflate0:armhf. 172s Preparing to unpack .../068-libdeflate0_1.23-2_armhf.deb ... 172s Unpacking libdeflate0:armhf (1.23-2) ... 172s Selecting previously unselected package libfreetype6:armhf. 172s Preparing to unpack .../069-libfreetype6_2.13.3+dfsg-1build1_armhf.deb ... 172s Unpacking libfreetype6:armhf (2.13.3+dfsg-1build1) ... 172s Selecting previously unselected package libfontconfig1:armhf. 172s Preparing to unpack .../070-libfontconfig1_2.15.0-2.3ubuntu1_armhf.deb ... 172s Unpacking libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 172s Selecting previously unselected package libfyba0t64:armhf. 172s Preparing to unpack .../071-libfyba0t64_4.1.1-11build1_armhf.deb ... 172s Unpacking libfyba0t64:armhf (4.1.1-11build1) ... 172s Selecting previously unselected package libminizip1t64:armhf. 172s Preparing to unpack .../072-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_armhf.deb ... 172s Unpacking libminizip1t64:armhf (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 172s Selecting previously unselected package libfreexl1:armhf. 172s Preparing to unpack .../073-libfreexl1_2.0.0-1build2_armhf.deb ... 172s Unpacking libfreexl1:armhf (2.0.0-1build2) ... 172s Selecting previously unselected package libgeos3.14.1:armhf. 172s Preparing to unpack .../074-libgeos3.14.1_3.14.1-1_armhf.deb ... 172s Unpacking libgeos3.14.1:armhf (3.14.1-1) ... 172s Selecting previously unselected package libgeos-c1t64:armhf. 172s Preparing to unpack .../075-libgeos-c1t64_3.14.1-1_armhf.deb ... 172s Unpacking libgeos-c1t64:armhf (3.14.1-1) ... 172s Selecting previously unselected package proj-data. 172s Preparing to unpack .../076-proj-data_9.7.0-1_all.deb ... 172s Unpacking proj-data (9.7.0-1) ... 172s Selecting previously unselected package libjbig0:armhf. 172s Preparing to unpack .../077-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 172s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 172s Selecting previously unselected package liblerc4:armhf. 172s Preparing to unpack .../078-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 172s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 172s Selecting previously unselected package libsharpyuv0:armhf. 172s Preparing to unpack .../079-libsharpyuv0_1.5.0-0.1_armhf.deb ... 172s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 172s Selecting previously unselected package libwebp7:armhf. 172s Preparing to unpack .../080-libwebp7_1.5.0-0.1_armhf.deb ... 172s Unpacking libwebp7:armhf (1.5.0-0.1) ... 172s Selecting previously unselected package libtiff6:armhf. 172s Preparing to unpack .../081-libtiff6_4.7.0-3ubuntu3_armhf.deb ... 172s Unpacking libtiff6:armhf (4.7.0-3ubuntu3) ... 172s Selecting previously unselected package libproj25:armhf. 172s Preparing to unpack .../082-libproj25_9.7.0-1_armhf.deb ... 172s Unpacking libproj25:armhf (9.7.0-1) ... 172s Selecting previously unselected package libgeotiff5:armhf. 172s Preparing to unpack .../083-libgeotiff5_1.7.4-1_armhf.deb ... 172s Unpacking libgeotiff5:armhf (1.7.4-1) ... 172s Selecting previously unselected package libgif7:armhf. 172s Preparing to unpack .../084-libgif7_5.2.2-1ubuntu2_armhf.deb ... 172s Unpacking libgif7:armhf (5.2.2-1ubuntu2) ... 172s Selecting previously unselected package libsz2:armhf. 172s Preparing to unpack .../085-libsz2_1.1.4-2_armhf.deb ... 172s Unpacking libsz2:armhf (1.1.4-2) ... 172s Selecting previously unselected package libhdf4-0:armhf. 172s Preparing to unpack .../086-libhdf4-0_4.3.0-1_armhf.deb ... 172s Unpacking libhdf4-0:armhf (4.3.0-1) ... 172s Selecting previously unselected package libhdf5-310:armhf. 172s Preparing to unpack .../087-libhdf5-310_1.14.5+repack-4_armhf.deb ... 172s Unpacking libhdf5-310:armhf (1.14.5+repack-4) ... 172s Selecting previously unselected package libheif-plugin-aomdec:armhf. 172s Preparing to unpack .../088-libheif-plugin-aomdec_1.20.2-2build1_armhf.deb ... 172s Unpacking libheif-plugin-aomdec:armhf (1.20.2-2build1) ... 173s Selecting previously unselected package libheif-plugin-libde265:armhf. 173s Preparing to unpack .../089-libheif-plugin-libde265_1.20.2-2build1_armhf.deb ... 173s Unpacking libheif-plugin-libde265:armhf (1.20.2-2build1) ... 173s Selecting previously unselected package libheif1:armhf. 173s Preparing to unpack .../090-libheif1_1.20.2-2build1_armhf.deb ... 173s Unpacking libheif1:armhf (1.20.2-2build1) ... 173s Selecting previously unselected package liblcms2-2:armhf. 173s Preparing to unpack .../091-liblcms2-2_2.17-1_armhf.deb ... 173s Unpacking liblcms2-2:armhf (2.17-1) ... 173s Selecting previously unselected package libjxl0.11:armhf. 173s Preparing to unpack .../092-libjxl0.11_0.11.1-6ubuntu1_armhf.deb ... 173s Unpacking libjxl0.11:armhf (0.11.1-6ubuntu1) ... 173s Selecting previously unselected package liburiparser1:armhf. 173s Preparing to unpack .../093-liburiparser1_0.9.8+dfsg-2_armhf.deb ... 173s Unpacking liburiparser1:armhf (0.9.8+dfsg-2) ... 173s Selecting previously unselected package libkmlbase1t64:armhf. 173s Preparing to unpack .../094-libkmlbase1t64_1.3.0-13_armhf.deb ... 173s Unpacking libkmlbase1t64:armhf (1.3.0-13) ... 173s Selecting previously unselected package libkmldom1t64:armhf. 173s Preparing to unpack .../095-libkmldom1t64_1.3.0-13_armhf.deb ... 173s Unpacking libkmldom1t64:armhf (1.3.0-13) ... 173s Selecting previously unselected package libkmlengine1t64:armhf. 173s Preparing to unpack .../096-libkmlengine1t64_1.3.0-13_armhf.deb ... 173s Unpacking libkmlengine1t64:armhf (1.3.0-13) ... 173s Selecting previously unselected package libmuparser2v5:armhf. 173s Preparing to unpack .../097-libmuparser2v5_2.3.4-2_armhf.deb ... 173s Unpacking libmuparser2v5:armhf (2.3.4-2) ... 173s Selecting previously unselected package mysql-common. 173s Preparing to unpack .../098-mysql-common_5.8+1.1.1ubuntu1_all.deb ... 173s Unpacking mysql-common (5.8+1.1.1ubuntu1) ... 173s Selecting previously unselected package libmysqlclient24:armhf. 173s Preparing to unpack .../099-libmysqlclient24_8.4.7-0ubuntu2_armhf.deb ... 173s Unpacking libmysqlclient24:armhf (8.4.7-0ubuntu2) ... 173s Selecting previously unselected package libhdf5-hl-310:armhf. 173s Preparing to unpack .../100-libhdf5-hl-310_1.14.5+repack-4_armhf.deb ... 173s Unpacking libhdf5-hl-310:armhf (1.14.5+repack-4) ... 173s Selecting previously unselected package libnetcdf22:armhf. 173s Preparing to unpack .../101-libnetcdf22_1%3a4.9.3-1build1_armhf.deb ... 173s Unpacking libnetcdf22:armhf (1:4.9.3-1build1) ... 173s Selecting previously unselected package libltdl7:armhf. 173s Preparing to unpack .../102-libltdl7_2.5.4-7_armhf.deb ... 173s Unpacking libltdl7:armhf (2.5.4-7) ... 173s Selecting previously unselected package libodbc2:armhf. 173s Preparing to unpack .../103-libodbc2_2.3.14-1_armhf.deb ... 173s Unpacking libodbc2:armhf (2.3.14-1) ... 173s Selecting previously unselected package unixodbc-common. 173s Preparing to unpack .../104-unixodbc-common_2.3.14-1_all.deb ... 173s Unpacking unixodbc-common (2.3.14-1) ... 173s Selecting previously unselected package libodbcinst2:armhf. 173s Preparing to unpack .../105-libodbcinst2_2.3.14-1_armhf.deb ... 173s Unpacking libodbcinst2:armhf (2.3.14-1) ... 173s Selecting previously unselected package libopenjp2-7:armhf. 173s Preparing to unpack .../106-libopenjp2-7_2.5.3-2.1_armhf.deb ... 173s Unpacking libopenjp2-7:armhf (2.5.3-2.1) ... 173s Selecting previously unselected package libgpgmepp6t64:armhf. 173s Preparing to unpack .../107-libgpgmepp6t64_1.24.2-3ubuntu2_armhf.deb ... 173s Unpacking libgpgmepp6t64:armhf (1.24.2-3ubuntu2) ... 173s Selecting previously unselected package libpoppler147:armhf. 173s Preparing to unpack .../108-libpoppler147_25.03.0-11.1_armhf.deb ... 173s Unpacking libpoppler147:armhf (25.03.0-11.1) ... 173s Selecting previously unselected package libpq5:armhf. 173s Preparing to unpack .../109-libpq5_18.1-1_armhf.deb ... 173s Unpacking libpq5:armhf (18.1-1) ... 173s Selecting previously unselected package libqhull-r8.0:armhf. 173s Preparing to unpack .../110-libqhull-r8.0_2020.2-7_armhf.deb ... 173s Unpacking libqhull-r8.0:armhf (2020.2-7) ... 173s Selecting previously unselected package librttopo1:armhf. 173s Preparing to unpack .../111-librttopo1_1.1.0-4_armhf.deb ... 173s Unpacking librttopo1:armhf (1.1.0-4) ... 174s Selecting previously unselected package libspatialite8t64:armhf. 174s Preparing to unpack .../112-libspatialite8t64_5.1.0-3ubuntu1_armhf.deb ... 174s Unpacking libspatialite8t64:armhf (5.1.0-3ubuntu1) ... 174s Selecting previously unselected package libxerces-c3.2t64:armhf. 174s Preparing to unpack .../113-libxerces-c3.2t64_3.2.4+debian-1.3build1_armhf.deb ... 174s Unpacking libxerces-c3.2t64:armhf (3.2.4+debian-1.3build1) ... 174s Selecting previously unselected package libgdal38:armhf. 174s Preparing to unpack .../114-libgdal38_3.12.0+dfsg-1_armhf.deb ... 174s Unpacking libgdal38:armhf (3.12.0+dfsg-1) ... 174s Selecting previously unselected package libjs-jquery. 174s Preparing to unpack .../115-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 174s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 174s Selecting previously unselected package libjs-jquery-metadata. 174s Preparing to unpack .../116-libjs-jquery-metadata_12-4_all.deb ... 174s Unpacking libjs-jquery-metadata (12-4) ... 174s Selecting previously unselected package libjs-jquery-tablesorter. 174s Preparing to unpack .../117-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-4_all.deb ... 174s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 174s Selecting previously unselected package libjs-jquery-throttle-debounce. 174s Preparing to unpack .../118-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ... 174s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 174s Selecting previously unselected package libpython3.14-stdlib:armhf. 174s Preparing to unpack .../119-libpython3.14-stdlib_3.14.0-4_armhf.deb ... 174s Unpacking libpython3.14-stdlib:armhf (3.14.0-4) ... 174s Selecting previously unselected package pybuild-plugin-autopkgtest. 174s Preparing to unpack .../120-pybuild-plugin-autopkgtest_6.20250414_all.deb ... 174s Unpacking pybuild-plugin-autopkgtest (6.20250414) ... 174s Selecting previously unselected package python3-pyproject-hooks. 174s Preparing to unpack .../121-python3-pyproject-hooks_1.2.0-1_all.deb ... 174s Unpacking python3-pyproject-hooks (1.2.0-1) ... 174s Selecting previously unselected package python3-wheel. 174s Preparing to unpack .../122-python3-wheel_0.46.1-2_all.deb ... 174s Unpacking python3-wheel (0.46.1-2) ... 174s Selecting previously unselected package python3-build. 174s Preparing to unpack .../123-python3-build_1.2.2-4_all.deb ... 174s Unpacking python3-build (1.2.2-4) ... 174s Selecting previously unselected package python3-installer. 174s Preparing to unpack .../124-python3-installer_0.7.0+dfsg1-3_all.deb ... 174s Unpacking python3-installer (0.7.0+dfsg1-3) ... 174s Selecting previously unselected package pybuild-plugin-pyproject. 174s Preparing to unpack .../125-pybuild-plugin-pyproject_6.20250414_all.deb ... 174s Unpacking pybuild-plugin-pyproject (6.20250414) ... 174s Selecting previously unselected package python3-affine. 174s Preparing to unpack .../126-python3-affine_2.4.0-2_all.deb ... 174s Unpacking python3-affine (2.4.0-2) ... 174s Selecting previously unselected package python3.14. 174s Preparing to unpack .../127-python3.14_3.14.0-4_armhf.deb ... 174s Unpacking python3.14 (3.14.0-4) ... 175s Selecting previously unselected package python3-all. 175s Preparing to unpack .../128-python3-all_3.13.7-2_armhf.deb ... 175s Unpacking python3-all (3.13.7-2) ... 175s Selecting previously unselected package python3-cftime. 175s Preparing to unpack .../129-python3-cftime_1.6.5-1_armhf.deb ... 175s Unpacking python3-cftime (1.6.5-1) ... 175s Selecting previously unselected package python3-click. 175s Preparing to unpack .../130-python3-click_8.2.0+0.really.8.1.8-1_all.deb ... 175s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ... 175s Selecting previously unselected package python3-cligj. 175s Preparing to unpack .../131-python3-cligj_0.7.2-3_all.deb ... 175s Unpacking python3-cligj (0.7.2-3) ... 175s Selecting previously unselected package python3-cloudpickle. 175s Preparing to unpack .../132-python3-cloudpickle_3.1.1-1_all.deb ... 175s Unpacking python3-cloudpickle (3.1.1-1) ... 175s Selecting previously unselected package python3-coverage. 175s Preparing to unpack .../133-python3-coverage_7.8.2+dfsg1-1_armhf.deb ... 175s Unpacking python3-coverage (7.8.2+dfsg1-1) ... 175s Selecting previously unselected package python3-fsspec. 175s Preparing to unpack .../134-python3-fsspec_2025.3.2-1ubuntu1_all.deb ... 175s Unpacking python3-fsspec (2025.3.2-1ubuntu1) ... 175s Selecting previously unselected package python3-toolz. 175s Preparing to unpack .../135-python3-toolz_1.0.0-2_all.deb ... 175s Unpacking python3-toolz (1.0.0-2) ... 175s Selecting previously unselected package python3-locket. 175s Preparing to unpack .../136-python3-locket_1.0.0-2_all.deb ... 175s Unpacking python3-locket (1.0.0-2) ... 175s Selecting previously unselected package python3-partd. 175s Preparing to unpack .../137-python3-partd_1.4.2-1_all.deb ... 175s Unpacking python3-partd (1.4.2-1) ... 175s Selecting previously unselected package python3-dask. 175s Preparing to unpack .../138-python3-dask_2024.12.1+dfsg-2_all.deb ... 175s Unpacking python3-dask (2024.12.1+dfsg-2) ... 175s Selecting previously unselected package python3-decorator. 175s Preparing to unpack .../139-python3-decorator_5.2.1-2_all.deb ... 175s Unpacking python3-decorator (5.2.1-2) ... 175s Selecting previously unselected package python3-iniconfig. 175s Preparing to unpack .../140-python3-iniconfig_2.1.0-1_all.deb ... 175s Unpacking python3-iniconfig (2.1.0-1) ... 175s Selecting previously unselected package python3-netcdf4. 175s Preparing to unpack .../141-python3-netcdf4_1.7.3-1_armhf.deb ... 175s Unpacking python3-netcdf4 (1.7.3-1) ... 175s Selecting previously unselected package python3-pytz. 175s Preparing to unpack .../142-python3-pytz_2025.2-4_all.deb ... 175s Unpacking python3-pytz (2025.2-4) ... 175s Selecting previously unselected package python3-pandas-lib:armhf. 175s Preparing to unpack .../143-python3-pandas-lib_2.3.3+dfsg-1ubuntu1_armhf.deb ... 175s Unpacking python3-pandas-lib:armhf (2.3.3+dfsg-1ubuntu1) ... 176s Selecting previously unselected package python3-pandas. 176s Preparing to unpack .../144-python3-pandas_2.3.3+dfsg-1ubuntu1_all.deb ... 176s Unpacking python3-pandas (2.3.3+dfsg-1ubuntu1) ... 176s Selecting previously unselected package python3-pluggy. 176s Preparing to unpack .../145-python3-pluggy_1.6.0-1_all.deb ... 176s Unpacking python3-pluggy (1.6.0-1) ... 176s Selecting previously unselected package python3-pyproj. 176s Preparing to unpack .../146-python3-pyproj_3.7.2-1_armhf.deb ... 176s Unpacking python3-pyproj (3.7.2-1) ... 176s Selecting previously unselected package python3-pytest. 176s Preparing to unpack .../147-python3-pytest_8.4.2-1_all.deb ... 176s Unpacking python3-pytest (8.4.2-1) ... 176s Selecting previously unselected package libjs-jquery-hotkeys. 176s Preparing to unpack .../148-libjs-jquery-hotkeys_0.2.0-1_all.deb ... 176s Unpacking libjs-jquery-hotkeys (0.2.0-1) ... 176s Selecting previously unselected package libjs-jquery-isonscreen. 176s Preparing to unpack .../149-libjs-jquery-isonscreen_1.2.0-1.1_all.deb ... 176s Unpacking libjs-jquery-isonscreen (1.2.0-1.1) ... 176s Selecting previously unselected package python3-pytest-cov. 176s Preparing to unpack .../150-python3-pytest-cov_5.0.0-1_all.deb ... 176s Unpacking python3-pytest-cov (5.0.0-1) ... 176s Selecting previously unselected package python3-pytest-timeout. 176s Preparing to unpack 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libsharpyuv0:armhf (1.5.0-0.1) ... 178s Setting up libgpgmepp6t64:armhf (1.24.2-3ubuntu2) ... 178s Setting up libaom3:armhf (3.13.1-2) ... 178s Setting up mysql-common (5.8+1.1.1ubuntu1) ... 178s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode 178s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 178s Setting up proj-data (9.7.0-1) ... 178s Setting up libarchive-zip-perl (1.68-1) ... 178s Setting up libdebhelper-perl (13.24.2ubuntu1) ... 178s Setting up python3-fsspec (2025.3.2-1ubuntu1) ... 179s Setting up libpython3.14-minimal:armhf (3.14.0-4) ... 179s Setting up libpq5:armhf (18.1-1) ... 179s Setting up libdeflate0:armhf (1.23-2) ... 179s Setting up linux-libc-dev:armhf (6.17.0-6.6) ... 179s Setting up m4 (1.4.20-2) ... 179s Setting up libqhull-r8.0:armhf (2020.2-7) ... 179s Setting up python3-coverage (7.8.2+dfsg1-1) ... 179s Setting up python3-pytz (2025.2-4) ... 179s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 179s Setting up libxerces-c3.2t64:armhf (3.2.4+debian-1.3build1) ... 179s Setting up libgomp1:armhf (15.2.0-8ubuntu1) ... 179s Setting up python3-click (8.2.0+0.really.8.1.8-1) ... 179s Setting up libabsl20240722:armhf (20240722.0-4ubuntu1) ... 179s Setting up libmysqlclient24:armhf (8.4.7-0ubuntu2) ... 179s Setting up python3-wheel (0.46.1-2) ... 180s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 180s Setting up libaec0:armhf (1.1.4-2) ... 180s Setting up gdal-data (3.12.0+dfsg-1) ... 180s Setting up python3-cloudpickle (3.1.1-1) ... 180s Setting up libsnappy1v5:armhf (1.2.2-2) ... 180s Setting up libdw1t64:armhf (0.194-1) ... 180s Setting up python3-decorator (5.2.1-2) ... 180s Setting up autotools-dev (20240727.1) ... 180s Setting up libblas3:armhf (3.12.1-7) ... 180s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 180s Setting up rpcsvc-proto (1.4.3-1) ... 180s Setting up libcfitsio10t64:armhf (4.6.3-1) ... 180s Setting up python3-pyproject-hooks (1.2.0-1) ... 180s Setting up libfreetype6:armhf (2.13.3+dfsg-1build1) ... 180s Setting up libsvtav1enc2:armhf (2.3.0+dfsg-1) ... 180s Setting up fonts-dejavu-mono (2.37-8) ... 180s Setting up libmpc3:armhf (1.3.1-2) ... 180s Setting up python3-numpy-dev:armhf (1:2.3.4+ds-3ubuntu1) ... 180s Setting up libatomic1:armhf (15.2.0-8ubuntu1) ... 180s Setting up autopoint (0.23.2-1) ... 180s Setting up fonts-dejavu-core (2.37-8) ... 180s Setting up unixodbc-common (2.3.14-1) ... 180s Setting up libgav1-1:armhf (0.19.0-3build1) ... 180s Setting up libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 180s Setting up libltdl7:armhf (2.5.4-7) ... 180s Setting up python3-installer (0.7.0+dfsg1-3) ... 180s Setting up libgfortran5:armhf (15.2.0-8ubuntu1) ... 180s Setting up autoconf (2.72-3.1ubuntu1) ... 180s Setting up python3-pluggy (1.6.0-1) ... 181s Setting up libwebp7:armhf (1.5.0-0.1) ... 181s Setting up libubsan1:armhf (15.2.0-8ubuntu1) ... 181s Setting up libgif7:armhf (5.2.2-1ubuntu2) ... 181s Setting up libodbc2:armhf (2.3.14-1) ... 181s Setting up libgeos3.14.1:armhf (3.14.1-1) ... 181s Setting up liburiparser1:armhf (0.9.8+dfsg-2) ... 181s Setting up libfyba0t64:armhf (4.1.1-11build1) ... 181s Setting up dwz (0.16-2) ... 181s Setting up libdav1d7:armhf (1.5.2-1) ... 181s Setting up libminizip1t64:armhf (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 181s Setting up libcrypt-dev:armhf (1:4.5.1-1) ... 181s Setting up librav1e0.7:armhf (0.7.1-9) ... 181s Setting up libasan8:armhf (15.2.0-8ubuntu1) ... 181s Setting up libblosc1:armhf (1.21.5+ds-2) ... 181s Setting up debugedit (1:5.2-3) ... 181s Setting up libopenjp2-7:armhf (2.5.3-2.1) ... 181s Setting up python3-toolz (1.0.0-2) ... 181s Setting up libmuparser2v5:armhf (2.3.4-2) ... 181s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 181s Setting up libjs-jquery-hotkeys (0.2.0-1) ... 181s Setting up libisl23:armhf (0.27-1) ... 181s Setting up python3-affine (2.4.0-2) ... 181s Setting up python3-build (1.2.2-4) ... 181s Setting up libde265-0:armhf (1.0.16-1) ... 181s Setting up libc-dev-bin (2.42-2ubuntu2) ... 181s Setting up libkmlbase1t64:armhf (1.3.0-13) ... 181s Setting up python3-locket (1.0.0-2) ... 182s Setting up cpp-15-arm-linux-gnueabihf (15.2.0-8ubuntu1) ... 182s Setting up libjxl0.11:armhf (0.11.1-6ubuntu1) ... 182s Setting up python3.14-minimal (3.14.0-4) ... 183s Setting up libcc1-0:armhf (15.2.0-8ubuntu1) ... 183s Setting up cpp-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 183s Setting up libsz2:armhf (1.1.4-2) ... 183s Setting up gdal-plugins:armhf (3.12.0+dfsg-1) ... 183s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 183s Setting up automake (1:1.18.1-3) ... 183s update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode 183s Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... 183s Setting up python3-partd (1.4.2-1) ... 183s Setting up libodbcinst2:armhf (2.3.14-1) ... 183s Setting up liblapack3:armhf (3.12.1-7) ... 183s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 183s Setting up gettext (0.23.2-1) ... 183s Setting up libarpack2t64:armhf (3.9.1-6) ... 183s Setting up libgcc-15-dev:armhf (15.2.0-8ubuntu1) ... 183s Setting up gcc-15-arm-linux-gnueabihf (15.2.0-8ubuntu1) ... 183s Setting up libpython3.14-stdlib:armhf (3.14.0-4) ... 183s Setting up pybuild-plugin-pyproject (6.20250414) ... 183s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 183s Setting up python3-pytest (8.4.2-1) ... 184s Setting up libgeos-c1t64:armhf (3.14.1-1) ... 184s Setting up python3-cligj (0.7.2-3) ... 184s Setting up python3-dask (2024.12.1+dfsg-2) ... 187s Setting up libhdf4-0:armhf (4.3.0-1) ... 187s Setting up libsuperlu7:armhf (7.0.1+dfsg1-2) ... 187s Setting up intltool-debian (0.35.0+20060710.6) ... 187s Setting up libkmldom1t64:armhf (1.3.0-13) ... 187s Setting up libjs-jquery-metadata (12-4) ... 187s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... 187s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 191s Setting up dh-strip-nondeterminism (1.15.0-1) ... 191s Setting up librttopo1:armhf (1.1.0-4) ... 191s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 191s Setting up libhdf5-310:armhf (1.14.5+repack-4) ... 191s Setting up libfreexl1:armhf (2.0.0-1build2) ... 191s Setting up cpp-15 (15.2.0-8ubuntu1) ... 191s Setting up libtiff6:armhf (4.7.0-3ubuntu3) ... 191s Setting up cpp (4:15.2.0-4ubuntu1) ... 191s Setting up libc6-dev:armhf (2.42-2ubuntu2) ... 191s Setting up libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 191s Setting up python3.14 (3.14.0-4) ... 192s Setting up libarmadillo15 (1:15.2.1+dfsg-2) ... 192s Setting up libyuv0:armhf (0.0.1919.20250919-1) ... 192s Setting up gcc-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 192s Setting up libhdf5-hl-310:armhf (1.14.5+repack-4) ... 192s Setting up libavif16:armhf (1.3.0-1ubuntu1) ... 192s Setting up python3-scipy (1.16.3-1) ... 200s Setting up libpoppler147:armhf (25.03.0-11.1) ... 200s Setting up python3-pytest-timeout (2.4.0-2) ... 201s Setting up libproj25:armhf (9.7.0-1) ... 201s Setting up po-debconf (1.0.21+nmu1) ... 201s Setting up python3-pandas-lib:armhf (2.3.3+dfsg-1ubuntu1) ... 201s Setting up libnetcdf22:armhf (1:4.9.3-1build1) ... 201s Setting up python3-all (3.13.7-2) ... 201s Setting up python3-pytest-cov (5.0.0-1) ... 201s Setting up libkmlengine1t64:armhf (1.3.0-13) ... 201s Setting up python3-pyproj (3.7.2-1) ... 201s Setting up libgeotiff5:armhf (1.7.4-1) ... 201s Setting up gcc-15 (15.2.0-8ubuntu1) ... 201s Setting up libstdc++-15-dev:armhf (15.2.0-8ubuntu1) ... 201s Setting up python3-pandas (2.3.3+dfsg-1ubuntu1) ... 211s Setting up python3-cftime (1.6.5-1) ... 211s Setting up python3-netcdf4 (1.7.3-1) ... 212s Setting up libspatialite8t64:armhf (5.1.0-3ubuntu1) ... 212s Setting up libtool (2.5.4-7) ... 212s Setting up python3-xarray (2025.03.1-8) ... 215s Setting up g++-15-arm-linux-gnueabihf (15.2.0-8ubuntu1) ... 215s Setting up gcc (4:15.2.0-4ubuntu1) ... 215s Setting up dh-autoreconf (21) ... 215s Setting up g++-15 (15.2.0-8ubuntu1) ... 215s Setting up g++-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 215s Setting up debhelper (13.24.2ubuntu1) ... 215s Setting up g++ (4:15.2.0-4ubuntu1) ... 215s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 215s Setting up build-essential (12.12ubuntu2) ... 215s Setting up pybuild-plugin-autopkgtest (6.20250414) ... 215s Setting up libheif1:armhf (1.20.2-2build1) ... 215s Setting up libheif-plugin-aomdec:armhf (1.20.2-2build1) ... 215s Setting up libheif-plugin-libde265:armhf (1.20.2-2build1) ... 215s Setting up libgdal38:armhf (3.12.0+dfsg-1) ... 215s Setting up python3-rasterio (1.4.3-4build2) ... 215s Setting up python3-rioxarray (0.19.0-1) ... 215s Processing triggers for systemd (257.9-0ubuntu2) ... 215s Processing triggers for man-db (2.13.1-1) ... 217s Processing triggers for install-info (7.2-5) ... 217s Processing triggers for libc-bin (2.42-2ubuntu2) ... 225s autopkgtest [10:24:16]: test pybuild-autopkgtest: pybuild-autopkgtest 225s autopkgtest [10:24:16]: test pybuild-autopkgtest: [----------------------- 228s pybuild-autopkgtest 229s I: pybuild base:311: cd /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build; python3.14 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 232s ============================= test session starts ============================== 232s platform linux -- Python 3.14.0, pytest-8.4.2, pluggy-1.6.0 232s rootdir: /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build 232s configfile: pyproject.toml 232s plugins: typeguard-4.4.2, cov-5.0.0, timeout-2.4.0 232s collected 495 items / 44 deselected / 451 selected 232s 233s test/integration/test_integration__io.py ............................... [ 6%] 239s .............X....x.F.......................................... [ 20%] 240s test/integration/test_integration__io_uri_manager.py ........ [ 22%] 240s test/integration/test_integration_merge.py FFXx. [ 23%] 241s test/integration/test_integration_rioxarray.py ......................... [ 29%] 244s .............................................................F.......... [ 45%] 246s ........................................................................ [ 61%] 249s ..............................................XX........................ [ 77%] 250s ........................................................................ [ 93%] 251s .......F........ [ 96%] 252s test/integration/test_integration_xarray_plugin.py ...... [ 98%] 252s test/unit/test_options.py .... [ 98%] 252s test/unit/test_show_versions.py .... [ 99%] 252s test/unit/test_unit_reproject_match.py . [100%]/usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b02_1', mode='r', kwargs={'sharing': False}, manager_id='8fee5e8d-69f7-44e5-b9bc-e19c647589e8'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b01_1', mode='r', kwargs={'sharing': False}, manager_id='f6a5d8e5-b97b-499d-8adf-4e1aba175a9f'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:num_observations_500m', mode='r', kwargs={'sharing': False}, manager_id='42e43d92-a1c5-486a-9fa4-eee805c888df'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorZenith_1', mode='r', kwargs={'sharing': False}, manager_id='251bf6cf-d79c-49ed-8c67-c166f81ba90c'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:granule_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='aad3b516-030a-48bd-94cf-1794a4ead97a'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:state_1km_1', mode='r', kwargs={'sharing': False}, manager_id='f9fe2e1c-60d9-454f-af62-5f96ab03a5db'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:num_observations_1km', mode='r', kwargs={'sharing': False}, manager_id='74d9e9f4-2dbf-43af-856e-ed970dc43216'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='031957e9-1d39-464d-9488-cbc3784f2cb4'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='d84cfb58-0362-4ff3-a67d-939021bc31bd'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='e0c2cfb8-6e60-400e-9911-1a9ea5e797de'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='e847b6ee-66c3-4e58-825d-5ccc1fa2c6fd'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='f4cf0d4d-15be-4be9-b490-bf4498c0c29e'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='03f085fc-9016-4c75-83a2-acdf0650a036'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='833a2763-df61-449f-a5f4-d77640584ec7'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='b8c89901-ac86-4bb6-a62c-9919528a432a'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='090d05ca-2cb4-4b87-848c-f0d1fbce1f70'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='70c4a179-a666-4f94-8056-e88b5dc242dd'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='e7881cfd-8b81-4608-a419-6ca9f233bbce'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='9859149f-f4a5-49c0-a9c0-ada42757d428'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='8594beb4-7b6a-4869-bc82-fb3a95a471da'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='0ab914f3-b5d5-4c6b-ab85-c28ac4991e22'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:Range_1', mode='r', kwargs={'sharing': False}, manager_id='94fe8ac7-6701-4f42-a93e-1b97e5ab50c1'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarZenith_1', mode='r', kwargs={'sharing': False}, manager_id='60b04bb1-cd18-4eda-956e-002e0f6dd067'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='5f314dd7-b257-4974-95e7-5421a75f79e0'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:gflags_1', mode='r', kwargs={'sharing': False}, manager_id='2666b988-0722-4d14-aba7-dfa4e504bd9a'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:orbit_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='f30b9c75-41db-4cbb-962a-81b07f027402'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s 252s =================================== FAILURES =================================== 252s ____________________________ test_rasterio_vrt_gcps ____________________________ 252s 252s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-0/test_rasterio_vrt_gcps0') 252s 252s def test_rasterio_vrt_gcps(tmp_path): 252s tiffname = tmp_path / "test.tif" 252s src_gcps = [ 252s GroundControlPoint(row=0, col=0, x=156113, y=2818720, z=0), 252s GroundControlPoint(row=0, col=800, x=338353, y=2785790, z=0), 252s GroundControlPoint(row=800, col=800, x=297939, y=2618518, z=0), 252s GroundControlPoint(row=800, col=0, x=115698, y=2651448, z=0), 252s ] 252s crs = CRS.from_epsg(32618) 252s with rasterio.open( 252s tiffname, 252s mode="w", 252s height=800, 252s width=800, 252s count=3, 252s dtype=numpy.uint8, 252s driver="GTiff", 252s ) as source: 252s source.gcps = (src_gcps, crs) 252s 252s with rasterio.open(tiffname) as src: 252s # NOTE: Eventually src_crs will not need to be provided 252s # https://github.com/mapbox/rasterio/pull/2193 252s with rasterio.vrt.WarpedVRT(src, src_crs=crs) as vrt: 252s with rioxarray.open_rasterio(vrt) as rds: 252s assert rds.rio.height == 923 252s assert rds.rio.width == 1027 252s assert rds.rio.crs == crs 252s > assert rds.rio.transform().almost_equals( 252s Affine( 252s 216.8587081056465, 252s 0.0, 252s 115698.25, 252s 0.0, 252s -216.8587081056465, 252s 2818720.0, 252s ) 252s ) 252s E assert False 252s E + where False = almost_equals(Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0)) 252s E + where almost_equals = Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0).almost_equals 252s E + where Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0) = transform() 252s E + where transform = .transform 252s E + where = Size: 3MB\n[2843763 values with dtype=uint8]\nCoordinates:\n * band ...2.818e+06 ... 2.619e+06 2.619e+06\n spatial_ref int32 4B 0\nAttributes:\n scale_factor: 1.0\n add_offset: 0.0.rio 252s E + and Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0) = Affine(216.8587081056465, 0.0, 115698.25, 0.0, -216.8587081056465, 2818720.0) 252s 252s test/integration/test_integration__io.py:998: AssertionError 252s ------------------------------ Captured log call ------------------------------- 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s WARNING rasterio._env:test_integration__io.py:993 CPLE_NotSupported in transformer options does not support option INIT_DEST 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s WARNING rasterio._env:_io.py:55 CPLE_NotSupported in transformer options does not support option INIT_DEST 252s WARNING rasterio._env:_io.py:55 CPLE_NotSupported in transformer options does not support option INIT_DEST 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s ___________________________ test_merge_arrays[True] ____________________________ 252s 252s squeeze = True 252s 252s @pytest.mark.parametrize("squeeze", [True, False]) 252s def test_merge_arrays(squeeze): 252s dem_test = os.path.join(TEST_INPUT_DATA_DIR, "MODIS_ARRAY.nc") 252s with open_rasterio(dem_test) as rds: 252s rds.attrs = { 252s "_FillValue": rds.rio.nodata, 252s } 252s arrays = [ 252s rds.isel(x=slice(100), y=slice(100)), 252s rds.isel(x=slice(100, 200), y=slice(100, 200)), 252s rds.isel(x=slice(100), y=slice(100, 200)), 252s rds.isel(x=slice(100, 200), y=slice(100)), 252s ] 252s if squeeze: 252s arrays = [array.squeeze() for array in arrays] 252s merged = merge_arrays(arrays) 252s 252s assert_almost_equal( 252s merged.rio.bounds(), 252s (-7274009.6494863, 5003777.3385, -7227678.3778335, 5050108.6101528), 252s ) 252s assert merged.rio.shape == (200, 200) 252s assert_almost_equal(merged.sum(), 22865733) 252s 252s assert_almost_equal( 252s tuple(merged.rio.transform()), 252s ( 252s 231.6563582639536, 252s 0.0, 252s -7274009.649486291, 252s 0.0, 252s -231.65635826374404, 252s 5050108.61015275, 252s 0.0, 252s 0.0, 252s 1.0, 252s ), 252s ) 252s assert merged.rio._cached_transform() == merged.rio.transform() 252s assert sorted(merged.coords) == sorted(rds.coords) 252s assert merged.coords["band"].values == [1] 252s assert merged.rio.crs == rds.rio.crs 252s > assert merged.attrs == { 252s "AREA_OR_POINT": "Area", 252s "add_offset": 0.0, 252s "scale_factor": 1.0, 252s **rds.attrs, 252s } 252s E AssertionError: assert {'_FillValue'...int16(-28672)} == {'AREA_OR_POI..._factor': 1.0} 252s E 252s E Omitting 1 identical items, use -vv to show 252s E Right contains 3 more items: 252s E {'AREA_OR_POINT': 'Area', 'add_offset': 0.0, 'scale_factor': 1.0} 252s E Use -v to get more diff 252s 252s test/integration/test_integration_merge.py:55: AssertionError 252s ------------------------------ Captured log call ------------------------------- 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s ___________________________ test_merge_arrays[False] ___________________________ 252s 252s squeeze = False 252s 252s @pytest.mark.parametrize("squeeze", [True, False]) 252s def test_merge_arrays(squeeze): 252s dem_test = os.path.join(TEST_INPUT_DATA_DIR, "MODIS_ARRAY.nc") 252s with open_rasterio(dem_test) as rds: 252s rds.attrs = { 252s "_FillValue": rds.rio.nodata, 252s } 252s arrays = [ 252s rds.isel(x=slice(100), y=slice(100)), 252s rds.isel(x=slice(100, 200), y=slice(100, 200)), 252s rds.isel(x=slice(100), y=slice(100, 200)), 252s rds.isel(x=slice(100, 200), y=slice(100)), 252s ] 252s if squeeze: 252s arrays = [array.squeeze() for array in arrays] 252s merged = merge_arrays(arrays) 252s 252s assert_almost_equal( 252s merged.rio.bounds(), 252s (-7274009.6494863, 5003777.3385, -7227678.3778335, 5050108.6101528), 252s ) 252s assert merged.rio.shape == (200, 200) 252s assert_almost_equal(merged.sum(), 22865733) 252s 252s assert_almost_equal( 252s tuple(merged.rio.transform()), 252s ( 252s 231.6563582639536, 252s 0.0, 252s -7274009.649486291, 252s 0.0, 252s -231.65635826374404, 252s 5050108.61015275, 252s 0.0, 252s 0.0, 252s 1.0, 252s ), 252s ) 252s assert merged.rio._cached_transform() == merged.rio.transform() 252s assert sorted(merged.coords) == sorted(rds.coords) 252s assert merged.coords["band"].values == [1] 252s assert merged.rio.crs == rds.rio.crs 252s > assert merged.attrs == { 252s "AREA_OR_POINT": "Area", 252s "add_offset": 0.0, 252s "scale_factor": 1.0, 252s **rds.attrs, 252s } 252s E AssertionError: assert {'_FillValue'...int16(-28672)} == {'AREA_OR_POI..._factor': 1.0} 252s E 252s E Omitting 1 identical items, use -vv to show 252s E Right contains 3 more items: 252s E {'AREA_OR_POINT': 'Area', 'add_offset': 0.0, 'scale_factor': 1.0} 252s E Use -v to get more diff 252s 252s test/integration/test_integration_merge.py:55: AssertionError 252s ------------------------------ Captured log call ------------------------------- 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s _________________________ test_reproject__gcps_kwargs __________________________ 252s 252s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-0/test_reproject__gcps_kwargs0') 252s 252s def test_reproject__gcps_kwargs(tmp_path): 252s tiffname = tmp_path / "test.tif" 252s src_gcps = [ 252s GroundControlPoint(row=0, col=0, x=156113, y=2818720, z=0), 252s GroundControlPoint(row=0, col=800, x=338353, y=2785790, z=0), 252s GroundControlPoint(row=800, col=800, x=297939, y=2618518, z=0), 252s GroundControlPoint(row=800, col=0, x=115698, y=2651448, z=0), 252s ] 252s crs = CRS.from_epsg(32618) 252s with rasterio.open( 252s tiffname, 252s mode="w", 252s height=800, 252s width=800, 252s count=3, 252s dtype=numpy.uint8, 252s driver="GTiff", 252s ) as source: 252s source.gcps = (src_gcps, crs) 252s 252s with rioxarray.open_rasterio(tiffname) as rds: 252s rds.rio.write_crs(crs, inplace=True) 252s rds = rds.rio.reproject( 252s crs, 252s gcps=src_gcps, 252s ) 252s assert rds.rio.height == 923 252s assert rds.rio.width == 1027 252s assert rds.rio.crs == crs 252s > assert rds.rio.transform().almost_equals( 252s Affine( 252s 216.8587081056465, 252s 0.0, 252s 115698.25, 252s 0.0, 252s -216.8587081056465, 252s 2818720.0, 252s ) 252s ) 252s E assert False 252s E + where False = almost_equals(Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0)) 252s E + where almost_equals = Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0).almost_equals 252s E + where Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0) = transform() 252s E + where transform = .transform 252s E + where = Size: 3MB\narray([[[255, 255, 255, ..., 255, 255, 255],\n [255, 255...int32 4B 0\nAttributes:\n AREA_OR_POINT: Area\n scale_factor: 1.0\n add_offset: 0.0\n _FillValue: 255.rio 252s E + and Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0) = Affine(216.8587081056465, 0.0, 115698.25, 0.0, -216.8587081056465, 2818720.0) 252s 252s test/integration/test_integration_rioxarray.py:1176: AssertionError 252s ------------------------------ Captured log call ------------------------------- 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s __________________________ test_reproject__gcps_file ___________________________ 252s 252s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-0/test_reproject__gcps_file0') 252s 252s def test_reproject__gcps_file(tmp_path): 252s tiffname = tmp_path / "test.tif" 252s src_gcps = [ 252s GroundControlPoint(row=0, col=0, x=156113, y=2818720, z=0), 252s GroundControlPoint(row=0, col=800, x=338353, y=2785790, z=0), 252s GroundControlPoint(row=800, col=800, x=297939, y=2618518, z=0), 252s GroundControlPoint(row=800, col=0, x=115698, y=2651448, z=0), 252s ] 252s crs = CRS.from_epsg(32618) 252s with rasterio.open( 252s tiffname, 252s mode="w", 252s height=800, 252s width=800, 252s count=3, 252s dtype=numpy.uint8, 252s driver="GTiff", 252s ) as source: 252s source.gcps = (src_gcps, crs) 252s 252s with rioxarray.open_rasterio(tiffname) as rds: 252s rds = rds.rio.reproject( 252s crs, 252s ) 252s assert rds.rio.height == 923 252s assert rds.rio.width == 1027 252s assert rds.rio.crs == crs 252s > assert rds.rio.transform().almost_equals( 252s Affine( 252s 216.8587081056465, 252s 0.0, 252s 115698.25, 252s 0.0, 252s -216.8587081056465, 252s 2818720.0, 252s ) 252s ) 252s E assert False 252s E + where False = almost_equals(Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0)) 252s E + where almost_equals = Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0).almost_equals 252s E + where Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0) = transform() 252s E + where transform = .transform 252s E + where = Size: 3MB\narray([[[255, 255, 255, ..., 255, 255, 255],\n [255, 255...int32 4B 0\nAttributes:\n AREA_OR_POINT: Area\n scale_factor: 1.0\n add_offset: 0.0\n _FillValue: 255.rio 252s E + and Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0) = Affine(216.8587081056465, 0.0, 115698.25, 0.0, -216.8587081056465, 2818720.0) 252s 252s test/integration/test_integration_rioxarray.py:3204: AssertionError 252s ------------------------------ Captured log call ------------------------------- 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 252s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 252s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 252s =============================== warnings summary =============================== 252s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 252s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:975: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorZenith_1', mode='r', kwargs={'sharing': False}, manager_id='7adf48a4-2ec3-4827-9bcc-fb4e17941e41'), but file is not already closed. This may indicate a bug. 252s self.variable.encoding = dict(value) 252s 252s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 252s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:975: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='464e0a3f-f86c-46d7-b1db-95583c005c08'), but file is not already closed. This may indicate a bug. 252s self.variable.encoding = dict(value) 252s 252s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 252s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:975: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:Range_1', mode='r', kwargs={'sharing': False}, manager_id='bfbb7640-dbe5-4af0-b912-3a9ef6bf49eb'), but file is not already closed. This may indicate a bug. 252s self.variable.encoding = dict(value) 252s 252s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 252s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:975: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarZenith_1', mode='r', kwargs={'sharing': False}, manager_id='10f4b329-fcd9-4c80-9908-f1f943f84d24'), but file is not already closed. This may indicate a bug. 252s self.variable.encoding = dict(value) 252s 252s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 252s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:975: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='7dcb7a2d-2288-4480-bc70-de910afdea61'), but file is not already closed. This may indicate a bug. 252s self.variable.encoding = dict(value) 252s 252s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 252s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:975: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:gflags_1', mode='r', kwargs={'sharing': False}, manager_id='4073e10c-a267-4829-a95e-a1648943d710'), but file is not already closed. This may indicate a bug. 252s self.variable.encoding = dict(value) 252s 252s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 252s /usr/lib/python3/dist-packages/xarray/core/dataarray.py:975: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:orbit_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='46ee6b50-7e90-459c-9345-f9cf2ba2377f'), but file is not already closed. This may indicate a bug. 252s self.variable.encoding = dict(value) 252s 252s test/integration/test_integration__io.py::test_serialization 252s :491: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 8 from C header, got 48 from PyObject 252s 252s test/integration/test_integration__io.py: 13 warnings 252s test/integration/test_integration_rioxarray.py: 40 warnings 252s /usr/lib/python3/dist-packages/rioxarray/_io.py:939: DeprecationWarning: Supplying chunks as dimension-order tuples is deprecated. It will raise an error in the future. Instead use a dict with dimension names as keys. 252s return result.chunk(chunks, name_prefix=name_prefix, token=token) 252s 252s test/integration/test_integration__io.py: 24 warnings 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:503: DeprecationWarning: dropping variables using `drop` is deprecated; use drop_vars. 252s raster_ds[band_name], expected.sel(band=band).drop("band") 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 252s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1618: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='7cc44f24-4800-4a89-8ee9-ab9341db823f'), but file is not already closed. This may indicate a bug. 252s if any(not isinstance(idx, index_type) for idx in indexes.values()): 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 252s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1618: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='3ce19fae-25bd-4fed-a604-f642441c7943'), but file is not already closed. This may indicate a bug. 252s if any(not isinstance(idx, index_type) for idx in indexes.values()): 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 252s /usr/lib/python3/dist-packages/xarray/core/common.py:334: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='d550baa8-e9ec-46a2-8682-c118aa1782f3'), but file is not already closed. This may indicate a bug. 252s object.__setattr__(self, name, value) 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 252s /usr/lib/python3/dist-packages/xarray/core/common.py:334: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='c8a77d97-8387-4b67-8ddf-94b3711af62e'), but file is not already closed. This may indicate a bug. 252s object.__setattr__(self, name, value) 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 252s /usr/lib/python3/dist-packages/xarray/core/common.py:334: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpcxj2xj2z/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='12011461-6392-4985-9b23-dbecbfa8a74d'), but file is not already closed. This may indicate a bug. 252s object.__setattr__(self, name, value) 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 252s /usr/lib/python3/dist-packages/xarray/core/common.py:334: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpcxj2xj2z/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='618e689f-7ef4-45b5-ab50-bb6548faf644'), but file is not already closed. This may indicate a bug. 252s object.__setattr__(self, name, value) 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-None] 252s /usr/lib/python3/dist-packages/xarray/core/common.py:334: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpcxj2xj2z/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='ef8a9ccd-f6e4-4348-90be-d36c29517ea5'), but file is not already closed. This may indicate a bug. 252s object.__setattr__(self, name, value) 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:492: UserWarning: The specified chunks separate the stored chunks along dimension "y" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 252s with open_rasterio( 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:492: UserWarning: The specified chunks separate the stored chunks along dimension "x" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 252s with open_rasterio( 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:522: UserWarning: The specified chunks separate the stored chunks along dimension "y" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 252s with open_rasterio( 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:522: UserWarning: The specified chunks separate the stored chunks along dimension "x" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 252s with open_rasterio( 252s 252s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 252s /usr/lib/python3/dist-packages/_pytest/python.py:157: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='fc98d82f-5b3a-4ddb-9f81-433ebe7061b2'), but file is not already closed. This may indicate a bug. 252s result = testfunction(**testargs) 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpvfy2p0tf/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='7be3fe56-edc1-4850-a21a-b03d931eb080'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpvfy2p0tf/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='0c8a3240-f38a-4a36-9abf-f67a283a774b'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpvfy2p0tf/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='4b0c03ac-ea82-4f9f-90b2-591be98cc899'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='61409fe6-edc0-4c81-a85d-bee588303ec3'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='fea02550-8903-4434-a323-c9806c4e6add'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='ab28ea34-d836-4de5-b436-5be7b5071a2a'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='52c0de8e-078a-41fd-9aac-5662df90793b'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py::test_platecarree 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:3011: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='6d792850-4713-40da-856e-ccaf08de3633'), but file is not already closed. This may indicate a bug. 252s scalar_vars = {k for k, v in variables.items() if not v.dims} 252s 252s test/integration/test_integration__io.py: 8 warnings 252s test/integration/test_integration_rioxarray.py: 2 warnings 252s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 252s dataset = writer( 252s 252s test/integration/test_integration__io.py::test_notransform 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 252s /usr/lib/python3/dist-packages/rioxarray/_io.py:1143: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 252s warnings.warn(str(rio_warning.message), type(rio_warning.message)) # type: ignore 252s 252s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1106: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s with open_rasterio(test_file, mask_and_scale=True) as rds: 252s 252s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio1] 252s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio1] 252s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s rds = _io.open_rasterio( 252s 252s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1178: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s with open_rasterio(test_file, mask_and_scale=True) as rds: 252s 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1191: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s with open_rasterio(test_file, mask_and_scale=True) as rds: 252s 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 252s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s rds = _io.open_rasterio( 252s 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1211: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s with open_rasterio(test_file, mask_and_scale=True) as rds: 252s 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 252s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 252s test/integration/test_integration__io.py::test_writing_gcps 252s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: The given matrix is equal to Affine.identity or its flipped counterpart. GDAL may ignore this matrix and save no geotransform without raising an error. This behavior is somewhat driver-specific. 252s dataset = writer( 252s 252s test/integration/test_integration__io.py::test_rotation_affine 252s /usr/lib/python3.14/copy.py:233: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpoos81zpi/temp-21.tif', mode='r', kwargs={'sharing': False}, manager_id='77218b71-c6ac-4a88-929a-1ab0e853ea80'), but file is not already closed. This may indicate a bug. 252s args = (deepcopy(arg, memo) for arg in args) 252s 252s test/integration/test_integration__io.py::test_rotation_affine 252s /usr/lib/python3.14/copy.py:233: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpiipv7fox/temp-22.tif', mode='r', kwargs={'sharing': False}, manager_id='04999fa6-53fe-4f26-9934-6e443317f6d4'), but file is not already closed. This may indicate a bug. 252s args = (deepcopy(arg, memo) for arg in args) 252s 252s test/integration/test_integration__io.py::test_cint16_dtype[None] 252s test/integration/test_integration__io.py::test_cint16_dtype[complex_int16] 252s test/integration/test_integration__io.py::test_cint16_dtype_nodata 252s test/integration/test_integration__io.py::test_cint16_dtype_masked[None] 252s test/integration/test_integration__io.py::test_cint16_dtype_masked[complex_int16] 252s test/integration/test_integration__io.py::test_cint16_promote_dtype 252s test/integration/test_integration__io.py::test_cint16_promote_dtype 252s /usr/lib/python3/dist-packages/rasterio/__init__.py:256: ComplexWarning: Casting complex values to real discards the imaginary part 252s nodata = float(nodata) 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:state_1km_1', mode='r', kwargs={'sharing': False}, manager_id='c3b48d97-5482-4e6c-ae19-d928d53992a2'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:num_observations_1km', mode='r', kwargs={'sharing': False}, manager_id='e1be56c8-53fb-4afc-b174-7f0bcd3f1a09'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:granule_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='10139633-695b-4b46-91d5-ee6072b51c33'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpes9w96io/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='5094f23b-9fd0-4767-b2a8-5f069ea9d238'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='a7a8298d-6896-4fab-bc09-eb690697ec9c'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpes9w96io/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='ee4222bc-62d0-4ff1-a6a8-4475256e94c5'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpes9w96io/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='326046a6-edff-459a-ba78-d97008fea193'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-0/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='490bad7c-9b65-46d3-a816-d9fb44af89fb'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpf_o2vqyi/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='585a22a5-5649-4b63-ba0f-91cc3889dfb4'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpf_o2vqyi/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='c6bc1f99-5884-4403-8967-7ed84abbb3b4'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpf_o2vqyi/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='65f6f349-dd77-4837-b5c5-a6a9334b0231'), but file is not already closed. This may indicate a bug. 252s gc.collect() 252s 252s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 252s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 252s /usr/lib/python3/dist-packages/rioxarray/rioxarray.py:700: UserWarning: Transform that is non-rectilinear or with rotation found. Unable to recalculate. 252s warnings.warn( 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-True-True-open_method2] 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='01bbc24b-704b-4ac1-99ae-1702431e6781'), but file is not already closed. This may indicate a bug. 252s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-True-True-open_method2] 252s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='34b1e560-54ee-4f54-b64c-f6addc7db0f1'), but file is not already closed. This may indicate a bug. 252s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-True-True-open_method4] 252s /usr/lib/python3/dist-packages/pandas/core/indexes/frozen.py:99: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='d20d3873-10f6-4698-b55b-1e2ed671bb40'), but file is not already closed. This may indicate a bug. 252s return type(self), (list(self),) 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 252s /usr/lib/python3/dist-packages/dask/_task_spec.py:897: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='1cad0ecc-7062-4ae5-8e2a-1db326a4efd0'), but file is not already closed. This may indicate a bug. 252s self._removed = set() 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 252s /usr/lib/python3/dist-packages/dask/_task_spec.py:897: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='68879a51-8fbd-482b-b763-689226a98470'), but file is not already closed. This may indicate a bug. 252s self._removed = set() 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 252s /usr/lib/python3/dist-packages/dask/_task_spec.py:897: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='1ecfcaa1-e426-444d-b788-777d63a23466'), but file is not already closed. This may indicate a bug. 252s self._removed = set() 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method2] 252s /usr/lib/python3/dist-packages/dask/order.py:637: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='35fc76f0-985b-4f68-ba82-063a878d21bd'), but file is not already closed. This may indicate a bug. 252s result[k] = frozenset({k}) 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method2] 252s /usr/lib/python3/dist-packages/dask/order.py:637: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='844802f1-8cb4-44fe-afd3-93238d3d030f'), but file is not already closed. This may indicate a bug. 252s result[k] = frozenset({k}) 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method2] 252s /usr/lib/python3/dist-packages/dask/order.py:637: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='4a7ba7d1-0f05-42ac-a911-d4b37c7932a6'), but file is not already closed. This may indicate a bug. 252s result[k] = frozenset({k}) 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method1] 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='aaf12f9d-267f-4e59-ae2c-b6969e3b36e1'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method1] 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='8b98aace-220a-454c-a6b5-724a723556be'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method1] 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='60c7fd39-8557-4d22-acf2-73085dbfe47c'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method4] 252s /usr/lib/python3.14/copy.py:110: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='69b67a2b-2cec-446b-b5b7-e441e2b0ad7c'), but file is not already closed. This may indicate a bug. 252s def deepcopy(x, memo=None, _nil=[]): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method4] 252s /usr/lib/python3.14/copy.py:110: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='e06ad417-4328-41d2-83fb-621f1740df4f'), but file is not already closed. This may indicate a bug. 252s def deepcopy(x, memo=None, _nil=[]): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method0] 252s /usr/lib/python3.14/logging/__init__.py:1498: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='9314fb10-638f-4fca-85bb-4dab3a92ef7c'), but file is not already closed. This may indicate a bug. 252s def debug(self, msg, *args, **kwargs): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method0] 252s /usr/lib/python3.14/logging/__init__.py:1498: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='ce0c8522-ebe0-4c9e-80f1-76752ef571ca'), but file is not already closed. This may indicate a bug. 252s def debug(self, msg, *args, **kwargs): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method0] 252s /usr/lib/python3.14/logging/__init__.py:1498: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='39b66060-99c6-4018-9eff-906d26ae2573'), but file is not already closed. This may indicate a bug. 252s def debug(self, msg, *args, **kwargs): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method0] 252s /usr/lib/python3.14/logging/__init__.py:1498: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='c914c781-b4a1-4502-aec6-43c6266b0e86'), but file is not already closed. This may indicate a bug. 252s def debug(self, msg, *args, **kwargs): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method0] 252s /usr/lib/python3.14/logging/__init__.py:1498: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='8d30fd20-9f87-4615-b5e2-a2908c7a3002'), but file is not already closed. This may indicate a bug. 252s def debug(self, msg, *args, **kwargs): 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method0] 252s /usr/lib/python3.14/copy.py:226: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='91ca6ac0-9ef9-4935-bfa1-8c37a6f0484f'), but file is not already closed. This may indicate a bug. 252s memo[id(memo)]=[x] 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-True-open_method3] 252s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='d6397f76-ffc1-4427-a600-cf2f6c522d6a'), but file is not already closed. This may indicate a bug. 252s self._dependencies = frozenset((self.target,)) 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method1] 252s /usr/lib/python3/dist-packages/xarray/core/indexes.py:2032: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='2f4bf02b-4465-4633-b431-762122e9ad7a'), but file is not already closed. This may indicate a bug. 252s if not idx_coord_names <= filtered_coord_names: 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method3] 252s /usr/lib/python3/dist-packages/dask/order.py:267: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='b9c640dc-120a-4e79-a3b2-ae83c21c25a9'), but file is not already closed. This may indicate a bug. 252s def _with_offset(func: Callable[..., None]) -> Callable[..., None]: 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster__scale_factor_and_add_offset[True] 252s /usr/lib/python3/dist-packages/dask/order.py:661: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='9a9f8742-c026-428a-bf24-cfe06887712d'), but file is not already closed. This may indicate a bug. 252s if id(r_child) in transitive_deps_ids: 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1803: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s with rioxarray.open_rasterio( 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 252s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 252s /usr/lib/python3/dist-packages/rioxarray/_io.py:672: UserWarning: Scales differ across bands. The 'scale_factor' attribute will not be added. See the 'scales' attribute. 252s warnings.warn( 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 252s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 252s /usr/lib/python3/dist-packages/rioxarray/_io.py:681: UserWarning: Offsets differ across bands. The 'add_offset' attribute will not be added. See the 'offsets' attribute. 252s warnings.warn( 252s 252s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[True-True] 252s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[None-True] 252s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1897: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 252s with rioxarray.open_rasterio( 252s 252s test/integration/test_integration_rioxarray.py::test_nonstandard_dims_clip__dataset 252s /usr/lib/python3/dist-packages/xarray/core/utils.py:437: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/test_find_crs.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='98159e5c-7e67-4e4b-8dbd-fc48ee0c6bd1'), but file is not already closed. This may indicate a bug. 252s def __init__(self, mapping: Mapping[K, V]): 252s 252s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 252s /usr/lib/python3/dist-packages/xarray/core/utils.py:444: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='9a5c133c-ffd8-4f38-aeae-d6bffb6cc757'), but file is not already closed. This may indicate a bug. 252s return iter(self.mapping) 252s 252s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 252s /usr/lib/python3/dist-packages/xarray/core/utils.py:444: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='a0a901bc-8b98-4b01-bf01-98ea8473f1c9'), but file is not already closed. This may indicate a bug. 252s return iter(self.mapping) 252s 252s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 252s /usr/lib/python3/dist-packages/xarray/core/utils.py:444: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='9ebddbb8-6a79-421d-a9b6-656f96b4d1f3'), but file is not already closed. This may indicate a bug. 252s return iter(self.mapping) 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b03_1', mode='r', kwargs={'sharing': False}, manager_id='516e4862-c835-4187-ae8c-07f62425c7a4'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b04_1', mode='r', kwargs={'sharing': False}, manager_id='855a4349-8261-4700-bb5a-28117dd1cfe2'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b05_1', mode='r', kwargs={'sharing': False}, manager_id='7b876679-ed4b-43ee-91c6-e1337eb178a4'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b06_1', mode='r', kwargs={'sharing': False}, manager_id='2d6dd839-4316-4d65-a0a0-f10357e9bfa8'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b07_1', mode='r', kwargs={'sharing': False}, manager_id='5561d51a-5a1b-413a-984c-b1bd64278f0b'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:QC_500m_1', mode='r', kwargs={'sharing': False}, manager_id='6ba0ee78-3478-4984-b1b2-00dcd5f8f007'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:obscov_500m_1', mode='r', kwargs={'sharing': False}, manager_id='728cc538-be03-4264-9c4c-c86e8491f882'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 252s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:iobs_res_1', mode='r', kwargs={'sharing': False}, manager_id='c2ad0f31-35bb-4688-b6ea-3ddffd62fe1d'), but file is not already closed. This may indicate a bug. 252s @property 252s 252s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 252s =========================== short test summary info ============================ 252s FAILED test/integration/test_integration__io.py::test_rasterio_vrt_gcps - ass... 252s FAILED test/integration/test_integration_merge.py::test_merge_arrays[True] - ... 252s FAILED test/integration/test_integration_merge.py::test_merge_arrays[False] 252s FAILED test/integration/test_integration_rioxarray.py::test_reproject__gcps_kwargs 252s FAILED test/integration/test_integration_rioxarray.py::test_reproject__gcps_file 252s = 5 failed, 440 passed, 44 deselected, 2 xfailed, 4 xpassed, 196 warnings in 20.21s = 253s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build; python3.14 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 253s I: pybuild base:311: cd /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build; python3.13 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 255s ============================= test session starts ============================== 255s platform linux -- Python 3.13.9, pytest-8.4.2, pluggy-1.6.0 255s rootdir: /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build 255s configfile: pyproject.toml 255s plugins: typeguard-4.4.2, cov-5.0.0, timeout-2.4.0 255s collected 495 items / 44 deselected / 451 selected 255s 257s test/integration/test_integration__io.py ............................... [ 6%] 270s .............X....x.F.......................................... [ 20%] 270s test/integration/test_integration__io_uri_manager.py ........ [ 22%] 271s test/integration/test_integration_merge.py FFXx. [ 23%] 272s test/integration/test_integration_rioxarray.py ......................... [ 29%] 274s .............................................................F.......... [ 45%] 277s ........................................................................ [ 61%] 280s ..............................................XX........................ [ 77%] 281s ........................................................................ [ 93%] 282s .......F........ [ 96%] 282s test/integration/test_integration_xarray_plugin.py ...... [ 98%] 282s test/unit/test_options.py .... [ 98%] 283s test/unit/test_show_versions.py .... [ 99%] 283s test/unit/test_unit_reproject_match.py . [100%] 283s 283s =================================== FAILURES =================================== 283s ____________________________ test_rasterio_vrt_gcps ____________________________ 283s 283s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-1/test_rasterio_vrt_gcps0') 283s 283s def test_rasterio_vrt_gcps(tmp_path): 283s tiffname = tmp_path / "test.tif" 283s src_gcps = [ 283s GroundControlPoint(row=0, col=0, x=156113, y=2818720, z=0), 283s GroundControlPoint(row=0, col=800, x=338353, y=2785790, z=0), 283s GroundControlPoint(row=800, col=800, x=297939, y=2618518, z=0), 283s GroundControlPoint(row=800, col=0, x=115698, y=2651448, z=0), 283s ] 283s crs = CRS.from_epsg(32618) 283s with rasterio.open( 283s tiffname, 283s mode="w", 283s height=800, 283s width=800, 283s count=3, 283s dtype=numpy.uint8, 283s driver="GTiff", 283s ) as source: 283s source.gcps = (src_gcps, crs) 283s 283s with rasterio.open(tiffname) as src: 283s # NOTE: Eventually src_crs will not need to be provided 283s # https://github.com/mapbox/rasterio/pull/2193 283s with rasterio.vrt.WarpedVRT(src, src_crs=crs) as vrt: 283s with rioxarray.open_rasterio(vrt) as rds: 283s assert rds.rio.height == 923 283s assert rds.rio.width == 1027 283s assert rds.rio.crs == crs 283s > assert rds.rio.transform().almost_equals( 283s Affine( 283s 216.8587081056465, 283s 0.0, 283s 115698.25, 283s 0.0, 283s -216.8587081056465, 283s 2818720.0, 283s ) 283s ) 283s E assert False 283s E + where False = almost_equals(Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0)) 283s E + where almost_equals = Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0).almost_equals 283s E + where Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0) = transform() 283s E + where transform = .transform 283s E + where = Size: 3MB\n[2843763 values with dtype=uint8]\nCoordinates:\n * band ...2.818e+06 ... 2.619e+06 2.619e+06\n spatial_ref int32 4B 0\nAttributes:\n scale_factor: 1.0\n add_offset: 0.0.rio 283s E + and Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0) = Affine(216.8587081056465, 0.0, 115698.25, 0.0, -216.8587081056465, 2818720.0) 283s 283s test/integration/test_integration__io.py:998: AssertionError 283s ------------------------------ Captured log call ------------------------------- 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s WARNING rasterio._env:test_integration__io.py:993 CPLE_NotSupported in transformer options does not support option INIT_DEST 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s WARNING rasterio._env:_io.py:55 CPLE_NotSupported in transformer options does not support option INIT_DEST 283s WARNING rasterio._env:_io.py:55 CPLE_NotSupported in transformer options does not support option INIT_DEST 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s ___________________________ test_merge_arrays[True] ____________________________ 283s 283s squeeze = True 283s 283s @pytest.mark.parametrize("squeeze", [True, False]) 283s def test_merge_arrays(squeeze): 283s dem_test = os.path.join(TEST_INPUT_DATA_DIR, "MODIS_ARRAY.nc") 283s with open_rasterio(dem_test) as rds: 283s rds.attrs = { 283s "_FillValue": rds.rio.nodata, 283s } 283s arrays = [ 283s rds.isel(x=slice(100), y=slice(100)), 283s rds.isel(x=slice(100, 200), y=slice(100, 200)), 283s rds.isel(x=slice(100), y=slice(100, 200)), 283s rds.isel(x=slice(100, 200), y=slice(100)), 283s ] 283s if squeeze: 283s arrays = [array.squeeze() for array in arrays] 283s merged = merge_arrays(arrays) 283s 283s assert_almost_equal( 283s merged.rio.bounds(), 283s (-7274009.6494863, 5003777.3385, -7227678.3778335, 5050108.6101528), 283s ) 283s assert merged.rio.shape == (200, 200) 283s assert_almost_equal(merged.sum(), 22865733) 283s 283s assert_almost_equal( 283s tuple(merged.rio.transform()), 283s ( 283s 231.6563582639536, 283s 0.0, 283s -7274009.649486291, 283s 0.0, 283s -231.65635826374404, 283s 5050108.61015275, 283s 0.0, 283s 0.0, 283s 1.0, 283s ), 283s ) 283s assert merged.rio._cached_transform() == merged.rio.transform() 283s assert sorted(merged.coords) == sorted(rds.coords) 283s assert merged.coords["band"].values == [1] 283s assert merged.rio.crs == rds.rio.crs 283s > assert merged.attrs == { 283s "AREA_OR_POINT": "Area", 283s "add_offset": 0.0, 283s "scale_factor": 1.0, 283s **rds.attrs, 283s } 283s E AssertionError: assert {'_FillValue'...int16(-28672)} == {'AREA_OR_POI..._factor': 1.0} 283s E 283s E Omitting 1 identical items, use -vv to show 283s E Right contains 3 more items: 283s E {'AREA_OR_POINT': 'Area', 'add_offset': 0.0, 'scale_factor': 1.0} 283s E Use -v to get more diff 283s 283s test/integration/test_integration_merge.py:55: AssertionError 283s ------------------------------ Captured log call ------------------------------- 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s ___________________________ test_merge_arrays[False] ___________________________ 283s 283s squeeze = False 283s 283s @pytest.mark.parametrize("squeeze", [True, False]) 283s def test_merge_arrays(squeeze): 283s dem_test = os.path.join(TEST_INPUT_DATA_DIR, "MODIS_ARRAY.nc") 283s with open_rasterio(dem_test) as rds: 283s rds.attrs = { 283s "_FillValue": rds.rio.nodata, 283s } 283s arrays = [ 283s rds.isel(x=slice(100), y=slice(100)), 283s rds.isel(x=slice(100, 200), y=slice(100, 200)), 283s rds.isel(x=slice(100), y=slice(100, 200)), 283s rds.isel(x=slice(100, 200), y=slice(100)), 283s ] 283s if squeeze: 283s arrays = [array.squeeze() for array in arrays] 283s merged = merge_arrays(arrays) 283s 283s assert_almost_equal( 283s merged.rio.bounds(), 283s (-7274009.6494863, 5003777.3385, -7227678.3778335, 5050108.6101528), 283s ) 283s assert merged.rio.shape == (200, 200) 283s assert_almost_equal(merged.sum(), 22865733) 283s 283s assert_almost_equal( 283s tuple(merged.rio.transform()), 283s ( 283s 231.6563582639536, 283s 0.0, 283s -7274009.649486291, 283s 0.0, 283s -231.65635826374404, 283s 5050108.61015275, 283s 0.0, 283s 0.0, 283s 1.0, 283s ), 283s ) 283s assert merged.rio._cached_transform() == merged.rio.transform() 283s assert sorted(merged.coords) == sorted(rds.coords) 283s assert merged.coords["band"].values == [1] 283s assert merged.rio.crs == rds.rio.crs 283s > assert merged.attrs == { 283s "AREA_OR_POINT": "Area", 283s "add_offset": 0.0, 283s "scale_factor": 1.0, 283s **rds.attrs, 283s } 283s E AssertionError: assert {'_FillValue'...int16(-28672)} == {'AREA_OR_POI..._factor': 1.0} 283s E 283s E Omitting 1 identical items, use -vv to show 283s E Right contains 3 more items: 283s E {'AREA_OR_POINT': 'Area', 'add_offset': 0.0, 'scale_factor': 1.0} 283s E Use -v to get more diff 283s 283s test/integration/test_integration_merge.py:55: AssertionError 283s ------------------------------ Captured log call ------------------------------- 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s _________________________ test_reproject__gcps_kwargs __________________________ 283s 283s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-1/test_reproject__gcps_kwargs0') 283s 283s def test_reproject__gcps_kwargs(tmp_path): 283s tiffname = tmp_path / "test.tif" 283s src_gcps = [ 283s GroundControlPoint(row=0, col=0, x=156113, y=2818720, z=0), 283s GroundControlPoint(row=0, col=800, x=338353, y=2785790, z=0), 283s GroundControlPoint(row=800, col=800, x=297939, y=2618518, z=0), 283s GroundControlPoint(row=800, col=0, x=115698, y=2651448, z=0), 283s ] 283s crs = CRS.from_epsg(32618) 283s with rasterio.open( 283s tiffname, 283s mode="w", 283s height=800, 283s width=800, 283s count=3, 283s dtype=numpy.uint8, 283s driver="GTiff", 283s ) as source: 283s source.gcps = (src_gcps, crs) 283s 283s with rioxarray.open_rasterio(tiffname) as rds: 283s rds.rio.write_crs(crs, inplace=True) 283s rds = rds.rio.reproject( 283s crs, 283s gcps=src_gcps, 283s ) 283s assert rds.rio.height == 923 283s assert rds.rio.width == 1027 283s assert rds.rio.crs == crs 283s > assert rds.rio.transform().almost_equals( 283s Affine( 283s 216.8587081056465, 283s 0.0, 283s 115698.25, 283s 0.0, 283s -216.8587081056465, 283s 2818720.0, 283s ) 283s ) 283s E assert False 283s E + where False = almost_equals(Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0)) 283s E + where almost_equals = Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0).almost_equals 283s E + where Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0) = transform() 283s E + where transform = .transform 283s E + where = Size: 3MB\narray([[[255, 255, 255, ..., 255, 255, 255],\n [255, 255...int32 4B 0\nAttributes:\n AREA_OR_POINT: Area\n scale_factor: 1.0\n add_offset: 0.0\n _FillValue: 255.rio 283s E + and Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0) = Affine(216.8587081056465, 0.0, 115698.25, 0.0, -216.8587081056465, 2818720.0) 283s 283s test/integration/test_integration_rioxarray.py:1176: AssertionError 283s ------------------------------ Captured log call ------------------------------- 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv ./usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='26a5bbb6-0df3-4e86-97d7-229e52f7e7bf'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorZenith_1', mode='r', kwargs={'sharing': False}, manager_id='934a0df7-bd6f-4e4d-99a4-050b0bcf45cb'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='41a91188-3afa-4b69-b8bb-47ce64777ea5'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:Range_1', mode='r', kwargs={'sharing': False}, manager_id='8f1b9aa2-f0a7-4542-992f-231ebaa40c20'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarZenith_1', mode='r', kwargs={'sharing': False}, manager_id='80b58f33-ccdc-4a51-b890-d9fb9e0cab35'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='67c6655e-f8df-4199-b2f3-07b43bc0861e'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s 283s __________________________ test_reproject__gcps_file ___________________________ 283s 283s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-1/test_reproject__gcps_file0') 283s 283s def test_reproject__gcps_file(tmp_path): 283s tiffname = tmp_path / "test.tif" 283s src_gcps = [ 283s GroundControlPoint(row=0, col=0, x=156113, y=2818720, z=0), 283s GroundControlPoint(row=0, col=800, x=338353, y=2785790, z=0), 283s GroundControlPoint(row=800, col=800, x=297939, y=2618518, z=0), 283s GroundControlPoint(row=800, col=0, x=115698, y=2651448, z=0), 283s ] 283s crs = CRS.from_epsg(32618) 283s with rasterio.open( 283s tiffname, 283s mode="w", 283s height=800, 283s width=800, 283s count=3, 283s dtype=numpy.uint8, 283s driver="GTiff", 283s ) as source: 283s source.gcps = (src_gcps, crs) 283s 283s with rioxarray.open_rasterio(tiffname) as rds: 283s rds = rds.rio.reproject( 283s crs, 283s ) 283s assert rds.rio.height == 923 283s assert rds.rio.width == 1027 283s assert rds.rio.crs == crs 283s > assert rds.rio.transform().almost_equals( 283s Affine( 283s 216.8587081056465, 283s 0.0, 283s 115698.25, 283s 0.0, 283s -216.8587081056465, 283s 2818720.0, 283s ) 283s ) 283s E assert False 283s E + where False = almost_equals(Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0)) 283s E + where almost_equals = Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0).almost_equals 283s E + where Affine(216.8587081056465, 0.0, 115698.00000000004,\n 0.0, -216.8587081056465, 2818720.0) = transform() 283s E + where transform = .transform 283s E + where = Size: 3MB\narray([[[255, 255, 255, ..., 255, 255, 255],\n [255, 255...int32 4B 0\nAttributes:\n AREA_OR_POINT: Area\n scale_factor: 1.0\n add_offset: 0.0\n _FillValue: 255.rio 283s E + and Affine(216.8587081056465, 0.0, 115698.25,\n 0.0, -216.8587081056465, 2818720.0) = Affine(216.8587081056465, 0.0, 115698.25, 0.0, -216.8587081056465, 2818720.0) 283s 283s test/integration/test_integration_rioxarray.py:3204: AssertionError 283s ------------------------------ Captured log call ------------------------------- 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv , 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:gflags_1', mode='r', kwargs={'sharing': False}, manager_id='7e1487d9-caf3-4aa3-89ec-8a69bbb4ffc7'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s v.GDALEnv object at 0xe03d27a8>. 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s DEBUG rasterio._env:env.py:338 GDAL data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 PROJ data files are available at built-in paths. 283s DEBUG rasterio._env:env.py:338 Started GDALEnv: self=. 283s DEBUG rasterio._env:env.py:374 Stopped GDALEnv . 283s =============================== warnings summary =============================== 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:state_1km_1', mode='r', kwargs={'sharing': False}, manager_id='21a144e2-484e-4d3a-a63d-a6f05f06a90c'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorZenith_1', mode='r', kwargs={'sharing': False}, manager_id='eead602d-4437-4de5-90c5-6e1eb24f2a60'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SensorAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='0a6e1b7f-1063-4348-9587-544e4ba01b1b'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:Range_1', mode='r', kwargs={'sharing': False}, manager_id='726d21be-5412-4b77-a518-b0bd78e0f5a1'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarZenith_1', mode='r', kwargs={'sharing': False}, manager_id='f60b3d77-7a4b-4fb3-9705-dde6c1770609'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:SolarAzimuth_1', mode='r', kwargs={'sharing': False}, manager_id='7b4cefc1-241c-47dc-bb8b-9591fb711c2f'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:gflags_1', mode='r', kwargs={'sharing': False}, manager_id='f27ac24f-1b9d-4219-97fd-11dea06086ee'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_open_group_filter[open_rasterio1] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:2636: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:orbit_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='cf2d3bc4-c682-4a48-bc5a-2224dfd00018'), but file is not already closed. This may indicate a bug. 283s def __init__(self, dims, data, attrs=None, encoding=None, fastpath=False): 283s 283s test/integration/test_integration__io.py::test_serialization 283s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 8 from C header, got 48 from PyObject 283s 283s test/integration/test_integration__io.py: 13 warnings 283s test/integration/test_integration_rioxarray.py: 40 warnings 283s /usr/lib/python3/dist-packages/rioxarray/_io.py:939: DeprecationWarning: Supplying chunks as dimension-order tuples is deprecated. It will raise an error in the future. Instead use a dict with dimension names as keys. 283s return result.chunk(chunks, name_prefix=name_prefix, token=token) 283s 283s test/integration/test_integration__io.py: 24 warnings 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:503: DeprecationWarning: dropping variables using `drop` is deprecated; use drop_vars. 283s raster_ds[band_name], expected.sel(band=band).drop("band") 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 283s /usr/lib/python3/dist-packages/dask/order.py:646: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:granule_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='8f3bcb43-6c6a-45dd-9c64-b2c9a4e9f14b'), but file is not already closed. This may indicate a bug. 283s while current: 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 283s /usr/lib/python3/dist-packages/dask/order.py:646: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:num_observations_1km', mode='r', kwargs={'sharing': False}, manager_id='a5384502-5e44-45d1-81d8-05169ceeda2b'), but file is not already closed. This may indicate a bug. 283s while current: 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio-True] 283s /usr/lib/python3/dist-packages/_pytest/python.py:157: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='24fad3c2-b9c1-4d55-a78c-bac54aa49f69'), but file is not already closed. This may indicate a bug. 283s result = testfunction(**testargs) 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:492: UserWarning: The specified chunks separate the stored chunks along dimension "y" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 283s with open_rasterio( 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:492: UserWarning: The specified chunks separate the stored chunks along dimension "x" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 283s with open_rasterio( 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmprbad7ce8/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='7ee917d9-8392-4248-92e6-a0af64cc1f60'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmprbad7ce8/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='f1d5729d-9876-4fe4-b446-bec09506781a'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmprbad7ce8/temp-4.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='29552dbf-2213-410c-ae70-620e899f005f'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='e59a0f89-31cd-4cb4-b2b0-a6e072c9b5b0'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='5bb8735b-1caa-49df-839c-e469e70259b3'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras1/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='3e40bc82-a394-40ba-92df-869794e31984'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='da5de5eb-fe96-46ff-9744-bdef1052169f'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/dask/tokenize.py:142: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras0/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='c332a9de-549e-4b8e-887c-f8d1baf77094'), but file is not already closed. This may indicate a bug. 283s def _inner_normalize_token(item): 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:522: UserWarning: The specified chunks separate the stored chunks along dimension "y" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 283s with open_rasterio( 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:522: UserWarning: The specified chunks separate the stored chunks along dimension "x" starting at index 1. This could degrade performance. Instead, consider rechunking after loading. 283s with open_rasterio( 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/_pytest/python.py:157: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='698e6771-f1ab-4369-9e4f-d207d00cec4b'), but file is not already closed. This may indicate a bug. 283s result = testfunction(**testargs) 283s 283s test/integration/test_integration__io.py::test_band_as_variable[open_rasterio1-True] 283s /usr/lib/python3/dist-packages/_pytest/python.py:157: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='8c70557b-f613-4009-b748-01282f9fad03'), but file is not already closed. This may indicate a bug. 283s result = testfunction(**testargs) 283s 283s test/integration/test_integration__io.py: 8 warnings 283s test/integration/test_integration_rioxarray.py: 2 warnings 283s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 283s dataset = writ/usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:orbit_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='aebde9e5-b33a-48ad-a6d9-72cc2a7d5bd7'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s er( 283s 283s test/integration/test_integration__io.py::test_notransform 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 283s /usr/lib/python3/dist-packages/rioxarray/_io.py:1143: NotGeoreferencedWarning: Dataset has no geotransform, gcps, or rpcs. The identity matrix will be returned. 283s warnings.warn(str(rio_warning.message), type(rio_warning.message)) # type: ignore 283s 283s test/integration/test_integration__io.py::test_indexing 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1955: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp6y737f5j/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='971ae3df-04fa-4b53-bee4-40c1107effa1'), but file is not already closed. This may indicate a bug. 283s index_dims = {d for var in index_vars.values() for d in var.dims} 283s 283s test/integration/test_integration__io.py::test_indexing 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1955: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp6y737f5j/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='d8899643-d3a3-43fe-870c-abe26cb49e3a'), but file is not already closed. This may indicate a bug. 283s index_dims = {d for var in index_vars.values() for d in var.dims} 283s 283s test/integration/test_integration__io.py::test_indexing 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1955: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp6y737f5j/temp-6.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='a7fb5ae2-33fd-4a8b-b9a6-9c62fa51c03e'), but file is not already closed. This may indicate a bug. 283s index_dims = {d for var in index_vars.values() for d in var.dims} 283s 283s test/integration/test_integration__io.py::test_indexing 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1955: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='6dadaec0-94ee-4178-aef2-d23ef6c2f27e'), but file is not already closed. This may indicate a bug. 283s index_dims = {d for var in index_vars.values() for d in var.dims} 283s 283s test/integration/test_integration__io.py::test_indexing 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1955: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='cb52a1f7-abea-4429-8d51-05538def1b8a'), but file is not already closed. This may indicate a bug. 283s index_dims = {d for var in index_vars.values() for d in var.dims} 283s 283s test/integration/test_integration__io.py::test_indexing 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1955: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras3/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='ee5b16e4-3df7-43e4-822b-d2a802050388'), but file is not already closed. This may indicate a bug. 283s index_dims = {d for var in index_vars.values() for d in var.dims} 283s 283s test/integration/test_integration__io.py::test_indexing 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1955: RuntimeWarning: deallocating CachingFileManager(, '/tmp/pytest-of-ubuntu/pytest-1/test_band_as_variable_open_ras2/test.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='c6809800-69ce-4a8f-bd84-71934c69e547'), but file is not already closed. This may indicate a bug. 283s index_dims = {d for var in index_vars.values() for d in var.dims} 283s 283s test/integration/test_integration__io.py::test_chunks 283s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpdpv6b80v/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='a0df9228-5fe2-4a63-a9dc-69252f6e4165'), but file is not already closed. This may indicate a bug. 283s def order( 283s 283s test/integration/test_integration__io.py::test_chunks 283s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpdpv6b80v/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='ee20734b-766a-49f6-bc92-7b43856a7ffb'), but file is not already closed. This may indicate a bug. 283s def order( 283s 283s test/integration/test_integration__io.py::test_chunks 283s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpdpv6b80v/temp-5.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='28a8b60d-405a-44c3-ba7e-fab257e6b916'), but file is not already closed. This may indicate a bug. 283s def order( 283s 283s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1106: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s with open_rasterio(test_file, mask_and_scale=True) as rds: 283s 283s test/integration/test_integration__io.py::test_mask_and_scale[open_rasterio1] 283s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio1] 283s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s rds = _io.open_rasterio( 283s 283s test/integration/test_integration__io.py::test_mask_and_scale__to_raster[open_rasterio] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1178: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s with open_rasterio(test_file, mask_and_scale=True) as rds: 283s 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1191: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s with open_rasterio(test_file, mask_and_scale=True) as rds: 283s 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode[open_rasterio1] 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 283s /usr/lib/python3/dist-packages/rioxarray/xarray_plugin.py:59: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s rds = _io.open_rasterio( 283s 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io.py:1211: SerializationWarning: variable 'LST' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s with open_rasterio(test_file, mask_and_scale=True) as rds: 283s 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio] 283s test/integration/test_integration__io.py::test_mask_and_scale__unicode__to_raster[open_rasterio1] 283s test/integration/test_integration__io.py::test_writing_gcps 283s /usr/lib/python3/dist-packages/rasterio/__init__.py:366: NotGeoreferencedWarning: The given matrix is equal to Affine.identity or its flipped counterpart. GDAL may ignore this matrix and save no geotransform without raising an error. This behavior is somewhat driver-specific. 283s dataset = writer( 283s 283s test/integration/test_integration__io.py::test_lock_true 283s /usr/lib/python3/dist-packages/dask/_task_spec./usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b01_1', mode='r', kwargs={'sharing': False}, manager_id='be641797-0088-40f8-8b8c-a2753fec2108'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s py:826: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp1a8qgeqg/temp-21.tif', mode='r', kwargs={'sharing': False}, manager_id='0944a6d8-e519-4fcf-9771-e32fda7c3b12'), but file is not already closed. This may indicate a bug. 283s *( 283s 283s test/integration/test_integration__io.py::test_lock_true 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:826: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmp6qsh9w_4/temp-22.tif', mode='r', kwargs={'sharing': False}, manager_id='ffe5273a-ef61-46af-8470-c3f8418ad76b'), but file is not already closed. This may indicate a bug. 283s *( 283s 283s test/integration/test_integration__io.py::test_cint16_dtype[None] 283s test/integration/test_integration__io.py::test_cint16_dtype[complex_int16] 283s test/integration/test_integration__io.py::test_cint16_dtype_nodata 283s test/integration/test_integration__io.py::test_cint16_dtype_masked[None] 283s test/integration/test_integration__io.py::test_cint16_dtype_masked[complex_int16] 283s test/integration/test_integration__io.py::test_cint16_promote_dtype 283s test/integration/test_integration__io.py::test_cint16_promote_dtype 283s /usr/lib/python3/dist-packages/rasterio/__init__.py:256: ComplexWarning: Casting complex values to real discards the imaginary part 283s nodata = float(nodata) 283s 283s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpwn_6zowq/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 1}, manager_id='0161d4c0-91f0-476a-9804-7c024fec8f86'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s 283s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpwn_6zowq/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 0}, manager_id='6d9124d3-245e-4d9d-9ac3-48d39dcc442e'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s 283s test/integration/test_integration__io_uri_manager.py::test_uri_manager_mock_write__threaded 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration__io_uri_manager.py:44: RuntimeWarning: deallocating CachingFileManager(, '/tmp/tmpwn_6zowq/temp-3.tif', mode='r', kwargs={'sharing': False, 'bidx': 2}, manager_id='2855cd5b-5a68-406f-b54f-f133989830fe'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s 283s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 283s test/integration/test_integration_rioxarray.py::test_reproject_match__rotated 283s /usr/lib/python3/dist-packages/rioxarray/rioxarray.py:700: UserWarning: Transform that is non-rectilinear or with rotation found. Unable to recalculate. 283s warnings.warn( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-True-True-open_method2] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:647: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='da6c3087-4dc6-4f6d-8cd2-68e189f5b6b5'), but file is not already closed. This may indicate a bug. 283s self.args = tuple( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-True-True-open_method4] 283s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='c6e89bc0-793b-47ba-8e1b-42f7f0209abf'), but file is not already closed. This may indicate a bug. 283s args = (deepcopy(arg, memo) for arg in args) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='792db864-ae9f-4e5a-bb9f-d6fa28972785'), but file is not already closed. This may indicate a bug. 283s self._dependencies = frozenset((self.target,)) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='f63b558c-5a97-4e53-a330-ff5ff1c6c26a'), but file is not already closed. This may indicate a bug. 283s self._dependencies = frozenset((self.target,)) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='d66a4ef1-1192-4aaa-8337-c22c0c6c5dc0'), but file is not already closed. This may indicate a bug. 283s self._dependencies = frozenset((self.target,)) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='e1178ae4-a415-4d54-b850-6819ddaadcd9'), but file is not already closed. This may indicate a bug. 283s self._dependencies = frozenset((self.target,)) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='d149064d-e411-456f-bb4a-16000a239fb3'), but file is not already closed. This may indicate a bug. 283s self._dependencies = frozenset((self.target,)) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[None-False-False-False-open_method3] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:514: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='30dd3dc6-c860-4ef2-a70f-24a0a4c6458a'), but file is not already closed. This may indicate a bug. 283s self._dependencies = frozenset((self.target,)) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-True-True-open_method4] 283s /usr/lib/python3.13/copy.py:253: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='e5df39e3-d898-42de-b345-d200de0c0b5f'), but file is not already closed. This may indicate a bug. 283s args = (deepcopy(arg, memo) for arg in args) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 283s :850: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='8d2db838-04ba-4b59-bffc-ecd10c121657'), but file is not already closed. This may indicate a bug. 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock1-False-False-False-open_method2] 283s :850: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='95f50cae-1e84-4a69-bde3-8f873702a30e'), but file is not already closed. This may indicate a bug. 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:864: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='2653b60e-8548-43c0-b4c5-b42ab019ec8a'), but file is not already closed. This may indicate a bug. 283s self._encoding = dict(value) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method0] 283s /usr/lib/python3/dist-packages/xarray/core/variable.py:864: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='8786cfb8-5703-40db-b095-f15c8c1d586b'), but file is not already closed. This may indicate a bug. 283s self._encoding = dict(value) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method3] 283s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='26345477-40cf-4f80-a6d2-1b93f3c47e17'), but file is not already closed. This may indicate a bug. 283s def order( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-True-True-open_method3] 283s /usr/lib/python3/dist-packages/dask/order.py:81: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='55d76a33-08c1-4e8b-943d-0ec48d033486'), but file is not already closed. This may indicate a bug. 283s def order( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:647: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='3696ef14-ff14-4701-b0a7-181123738c91'), but file is not already closed. This may indicate a bug. 283s self.args = tuple( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:647: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='d6b0f4ff-bdfa-4131-aa1c-92b8e0d03c04'), but file is not already closed. This may indicate a bug. 283s self.args = tuple( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster[write_lock2-True-False-False-open_method2] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:647: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='22882028-3a00-4464-b60d-6aa1f9615086'), but file is not already closed. This may indicate a bug. 283s self.args = tuple( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method1] 283s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='83c8634c-68cb-4824-9023-4d56266ab8a7'), but file is not already closed. This may indicate a bug. 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method1] 283s :873: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='4e616fbe-3a98-40d7-bb25-b8161648218c'), but file is not already closed. This may indicate a bug. 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-True-open_method3] 283s /usr/lib/python3/dist-packages/numpy/_core/arrayprint.py:519: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='c0f13955-8981-4c62-8edf-ff04b982561c'), but file is not already closed. This may indicate a bug. 283s elif issubclass(dtypeobj, _nt.bool): 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[None-False-False-open_method4] 283s /usr/lib/python3.13/copy.py:142: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='215a91d7-f884-413d-aec1-13936101b1b3'), but file is not already closed. This may indicate a bug. 283s copier = getattr(x, "__deepcopy__", None) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='43f2eb0b-f04c-4554-899e-dd4dda57d3bd'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='1103d53c-7a94-4761-a6cb-b4113bc63787'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='9d69dbdf-0649-4ee6-9a1e-20093c85cfce'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='054dd2f2-d12c-423d-acec-cacb418bdbd2'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='9f70f60c-2324-4ce8-8488-330adba6784b'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MODIS_ARRAY.nc', mode='r', kwargs={'sharing': False}, manager_id='7777b522-9acf-441d-b473-1cf118d568f8'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='9e58fde9-4d6f-418c-9622-960b233d4c3a'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='274936e5-22d4-4dac-a5d6-cb2beb5dbe4f'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='74797c8c-7bff-4c6b-9d1a-a7a36d8299ea'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock1-False-False-open_method0] 283s /usr/lib/python3/dist-packages/xarray/namedarray/core.py:496: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='4a67c0d1-99a6-47ab-8d29-32bd910b9a57'), but file is not already closed. This may indicate a bug. 283s @property 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method0] 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1650: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='6f64ec9d-bc6d-4e4b-9787-475803657a1c'), but file is not already closed. This may indicate a bug. 283s id_coord_names[v].append(k) 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-True-open_method3] 283s /usr/lib/python3/dist-packages/xarray/core/coordinates.py:1103: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='ef72dc00-ae83-4ba0-b9b2-37151dcdda55'), but file is not already closed. This may indicate a bug. 283s for k, v in all_variables.items(): 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster_3d[write_lock2-True-False-open_method3] 283s /usr/lib/python3/dist-packages/dask/_task_spec.py:405: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='1a936d5b-a63f-4c8a-8d6b-43b4891dbe88'), but file is not already closed. This may indicate a bug. 283s if missing := set(self.dependencies) - set(values): 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1803: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s with rioxarray.open_rasterio( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 283s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 283s /usr/lib/python3/dist-packages/rioxarray/_io.py:672: UserWarning: Scales differ across bands. The 'scale_factor' attribute will not be added. See the 'scales' attribute. 283s warnings.warn( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[True] 283s test/integration/test_integration_rioxarray.py::test_to_raster__scales__offsets[False] 283s /usr/lib/python3/dist-packages/rioxarray/_io.py:681: UserWarning: Offsets differ across bands. The 'add_offset' attribute will not be added. See the 'offsets' attribute. 283s warnings.warn( 283s 283s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[True-True] 283s test/integration/test_integration_rioxarray.py::test_to_raster__dataset__mask_and_scale[None-True] 283s /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/integration/test_integration_rioxarray.py:1897: SerializationWarning: variable 'air_temperature' has _Unsigned attribute but is not of integer type. Ignoring attribute. 283s with rioxarray.open_rasterio( 283s 283s test/integration/test_integration_rioxarray.py::test_write_nodata__array__inplace 283s /usr/lib/python3/dist-packages/pandas/core/indexes/base.py:1773: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/test_find_crs.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='b014053f-4068-425e-8132-b32c73a84334'), but file is not already closed. This may indicate a bug. 283s return FrozenList((self.name,)) 283s 283s test/integration/test_integration_rioxarray.py::test_nonstandard_dims_find_dims__standard_name__projected 283s /usr/lib/python3/dist-packages/xarray/coding/variables.py:480: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='2581fd8b-a6f2-4499-9882-21af4b84362b'), but file is not already closed. This may indicate a bug. 283s def __init__( 283s 283s test/integration/test_integration_rioxarray.py::test_nonstandard_dims_find_dims__standard_name__projected 283s /usr/lib/python3/dist-packages/xarray/coding/variables.py:480: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='1e9036a1-37d1-4495-84af-116425e775a6'), but file is not already closed. This may indicate a bug. 283s def __init__( 283s 283s test/integration/test_integration_rioxarray.py::test_nonstandard_dims_find_dims__standard_name__projected 283s /usr/lib/python3/dist-packages/xarray/coding/variables.py:480: RuntimeWarning: deallocating CachingFileManager(, 'netcdf:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/PLANET_SCOPE_3D.nc:green', mode='r', kwargs={'sharing': False}, manager_id='cbf58055-e602-4fdf-bf39-a81e2adefba3'), but file is not already closed. This may indicate a bug. 283s def __init__( 283s 283s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 283s :850: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='f3eb1715-c385-40c9-b2d1-4b78a62b500f'), but file is not already closed. This may indicate a bug. 283s 283s test/integr/usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:num_observations_500m', mode='r', kwargs={'sharing': False}, manager_id='e327788c-a548-447b-939f-8182672f99be'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:granule_pnt_1', mode='r', kwargs={'sharing': False}, manager_id='3e08da46-c2db-4a3b-ba65-ce6843683dbb'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:state_1km_1', mode='r', kwargs={'sharing': False}, manager_id='57fd8ed3-2150-4424-b541-1500e48a1dc7'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:33: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_1km_2D:num_observations_1km', mode='r', kwargs={'sharing': False}, manager_id='eebf2670-da84-4738-9db3-6c501cd7f14e'), but file is not already closed. This may indicate a bug. 283s gc.collect() 283s ation/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 283s :850: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='3ccc1bfc-fa68-4352-935e-a2069098f65d'), but file is not already closed. This may indicate a bug. 283s 283s test/integration/test_integration_xarray_plugin.py::test_xarray_open_dataset__drop_variables 283s :850: RuntimeWarning: deallocating CachingFileManager(, '/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/cog.tif', mode='r', kwargs={'sharing': False}, manager_id='6982acd2-b0b7-43a7-882f-2f9dafeeb655'), but file is not already closed. This may indicate a bug. 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b02_1', mode='r', kwargs={'sharing': False}, manager_id='f587fbbf-cccd-4059-856d-9323ba6a94a8'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b03_1', mode='r', kwargs={'sharing': False}, manager_id='d6812786-d1c4-43ec-aa31-52c8d0126c42'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b04_1', mode='r', kwargs={'sharing': False}, manager_id='a3fb559f-33fe-4267-a52f-e637e8eba5b4'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b05_1', mode='r', kwargs={'sharing': False}, manager_id='9c8b366e-4a40-4a9a-81a8-5d5394aafaf8'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b06_1', mode='r', kwargs={'sharing': False}, manager_id='5c0f8f70-866d-4205-b5fa-655872f43bda'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:sur_refl_b07_1', mode='r', kwargs={'sharing': False}, manager_id='9519ef87-2173-41da-bcb8-1ef36c2b5bad'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:QC_500m_1', mode='r', kwargs={'sharing': False}, manager_id='e6c4fff4-cdb4-406c-98ef-268012a6f0bc'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:obscov_500m_1', mode='r', kwargs={'sharing': False}, manager_id='7e2f5259-8b63-41ae-b620-41615b8f4a8d'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s test/integration/test_integration_xarray_plugin.py::test_open_multiple_resolution 283s /usr/lib/python3/dist-packages/xarray/core/indexes.py:1612: RuntimeWarning: deallocating CachingFileManager(, 'HDF4_EOS:EOS_GRID:/tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build/test/test_data/input/MOD09GA.A2008296.h14v17.006.2015181011753.hdf:MODIS_Grid_500m_2D:iobs_res_1', mode='r', kwargs={'sharing': False}, manager_id='bd20660b-a102-4523-9dbb-06d80e995d48'), but file is not already closed. This may indicate a bug. 283s unmatched_keys = set(indexes) ^ set(variables) 283s 283s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 283s =========================== short test summary info ============================ 283s FAILED test/integration/test_integration__io.py::test_rasterio_vrt_gcps - ass... 283s FAILED test/integration/test_integration_merge.py::test_merge_arrays[True] - ... 283s FAILED test/integration/test_integration_merge.py::test_merge_arrays[False] 283s FAILED test/integration/test_integration_rioxarray.py::test_reproject__gcps_kwargs 283s FAILED test/integration/test_integration_rioxarray.py::test_reproject__gcps_file 283s = 5 failed, 440 passed, 44 deselected, 2 xfailed, 4 xpassed, 211 warnings in 27.91s = 283s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.R5hQY0/autopkgtest_tmp/build; python3.13 -m pytest -k "not test_clip_geojson__no_drop and not test_clip_geojson and not test_interpolate_na and not test_merge_datasets and not test_open_rasterio_mask_chunk_clip and not test_to_raster__different_dtype and not test_nonstandard_dims_write_coordinate_system__projected_ft" 283s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p "3.14 3.13" returned exit code 13 283s make: *** [/tmp/vG0UNFVIlR/run:4: pybuild-autopkgtest] Error 25 283s pybuild-autopkgtest: error: /tmp/vG0UNFVIlR/run pybuild-autopkgtest returned exit code 2 284s autopkgtest [10:25:15]: test pybuild-autopkgtest: -----------------------] 288s autopkgtest [10:25:19]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 288s pybuild-autopkgtest FAIL non-zero exit status 25 292s autopkgtest [10:25:23]: @@@@@@@@@@@@@@@@@@@@ summary 292s pybuild-autopkgtest FAIL non-zero exit status 25