0s autopkgtest [17:13:39]: starting date and time: 2025-11-17 17:13:39+0000 0s autopkgtest [17:13:39]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [17:13:39]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ascy8c9j/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:pytest --apt-upgrade python-hdf5storage --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=pytest/8.4.2-1 -- lxd -r lxd-armhf-10.145.243.46 lxd-armhf-10.145.243.46:autopkgtest/ubuntu/resolute/armhf 20s autopkgtest [17:13:59]: testbed dpkg architecture: armhf 22s autopkgtest [17:14:01]: testbed apt version: 3.1.11 26s autopkgtest [17:14:05]: @@@@@@@@@@@@@@@@@@@@ test bed setup 28s autopkgtest [17:14:07]: testbed release detected to be: None 35s autopkgtest [17:14:14]: updating testbed package index (apt update) 37s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 37s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [87.8 kB] 38s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 38s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 38s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9852 B] 38s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [779 kB] 38s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [73.2 kB] 38s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 38s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [134 kB] 38s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted armhf Packages [940 B] 38s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [474 kB] 38s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [9684 B] 38s Get:13 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.3 MB] 39s Get:14 http://ftpmaster.internal/ubuntu resolute/main Sources [1416 kB] 39s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1369 kB] 39s Get:16 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [15.4 MB] 42s Fetched 41.2 MB in 5s (7841 kB/s) 43s Reading package lists... 49s autopkgtest [17:14:28]: upgrading testbed (apt dist-upgrade and autopurge) 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s Calculating upgrade... 52s The following packages will be upgraded: 52s apt libapt-pkg7.0 libcrypt1 usbutils 52s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 52s Need to get 2774 kB of archives. 52s After this operation, 8192 B of additional disk space will be used. 52s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf libapt-pkg7.0 armhf 3.1.12 [1157 kB] 53s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf apt armhf 3.1.12 [1440 kB] 53s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libcrypt1 armhf 1:4.5.1-1 [98.9 kB] 53s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf usbutils armhf 1:019-1 [77.7 kB] 53s Fetched 2774 kB in 1s (3408 kB/s) 53s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 53s Preparing to unpack .../libapt-pkg7.0_3.1.12_armhf.deb ... 53s Unpacking libapt-pkg7.0:armhf (3.1.12) over (3.1.11) ... 53s Setting up libapt-pkg7.0:armhf (3.1.12) ... 53s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 53s Preparing to unpack .../archives/apt_3.1.12_armhf.deb ... 53s Unpacking apt (3.1.12) over (3.1.11) ... 54s Setting up apt (3.1.12) ... 54s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 54s Preparing to unpack .../libcrypt1_1%3a4.5.1-1_armhf.deb ... 54s Unpacking libcrypt1:armhf (1:4.5.1-1) over (1:4.4.38-1build1) ... 54s Setting up libcrypt1:armhf (1:4.5.1-1) ... 54s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 54s Preparing to unpack .../usbutils_1%3a019-1_armhf.deb ... 54s Unpacking usbutils (1:019-1) over (1:018-2) ... 54s Setting up usbutils (1:019-1) ... 54s Processing triggers for man-db (2.13.1-1) ... 56s Processing triggers for libc-bin (2.42-2ubuntu2) ... 59s Reading package lists... 60s Building dependency tree... 60s Reading state information... 60s Solving dependencies... 60s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 62s autopkgtest [17:14:41]: rebooting testbed after setup commands that affected boot 102s autopkgtest [17:15:21]: testbed running kernel: Linux 6.8.0-86-generic #87~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 29 09:26:46 UTC 2 127s autopkgtest [17:15:46]: @@@@@@@@@@@@@@@@@@@@ apt-source python-hdf5storage 141s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-hdf5storage 0.1.19-4 (dsc) [2495 B] 141s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-hdf5storage 0.1.19-4 (tar) [92.3 kB] 141s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-hdf5storage 0.1.19-4 (diff) [7740 B] 142s gpgv: Signature made Mon Feb 3 17:09:51 2025 UTC 142s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 142s gpgv: issuer "tchet@debian.org" 142s gpgv: Can't check signature: No public key 142s dpkg-source: warning: cannot verify inline signature for ./python-hdf5storage_0.1.19-4.dsc: no acceptable signature found 142s autopkgtest [17:16:01]: testing package python-hdf5storage version 0.1.19-4 144s autopkgtest [17:16:03]: build not needed 146s autopkgtest [17:16:05]: test command1: preparing testbed 148s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Solving dependencies... 149s The following NEW packages will be installed: 149s libaec0 libblas3 libgfortran5 libhdf5-310 libhdf5-hl-310 liblapack3 liblzf1 149s libsz2 python3-decorator python3-h5py python3-h5py-serial 149s python3-hdf5storage python3-iniconfig python3-numpy python3-numpy-dev 149s python3-pluggy python3-pytest python3-scipy 149s 0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded. 149s Need to get 29.1 MB of archives. 149s After this operation, 130 MB of additional disk space will be used. 149s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf python3-numpy-dev armhf 1:2.2.4+ds-1ubuntu1 [141 kB] 150s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libblas3 armhf 3.12.1-7 [133 kB] 150s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libgfortran5 armhf 15.2.0-7ubuntu1 [334 kB] 150s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf liblapack3 armhf 3.12.1-7 [2091 kB] 150s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf python3-numpy armhf 1:2.2.4+ds-1ubuntu1 [3724 kB] 150s Get:6 http://ftpmaster.internal/ubuntu resolute/universe armhf libaec0 armhf 1.1.4-2 [21.1 kB] 150s Get:7 http://ftpmaster.internal/ubuntu resolute/universe armhf libsz2 armhf 1.1.4-2 [5322 B] 150s Get:8 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-310 armhf 1.14.5+repack-4 [1422 kB] 150s Get:9 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-4 [58.7 kB] 150s Get:10 http://ftpmaster.internal/ubuntu resolute/universe armhf liblzf1 armhf 3.6-4 [6554 B] 150s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf python3-decorator all 5.2.1-2 [28.1 kB] 150s Get:12 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-h5py-serial armhf 3.13.0-1ubuntu1 [1109 kB] 150s Get:13 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-h5py all 3.13.0-1ubuntu1 [8230 B] 150s Get:14 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-hdf5storage all 0.1.19-4 [45.0 kB] 150s Get:15 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-iniconfig all 2.1.0-1 [6840 B] 150s Get:16 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pluggy all 1.6.0-1 [21.0 kB] 150s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-pytest all 8.4.2-1 [268 kB] 150s Get:18 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-scipy armhf 1.15.3-1ubuntu1 [19.7 MB] 152s Fetched 29.1 MB in 2s (15.8 MB/s) 152s Selecting previously unselected package python3-numpy-dev:armhf. 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 65904 files and directories currently installed.) 152s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_armhf.deb ... 152s Unpacking python3-numpy-dev:armhf (1:2.2.4+ds-1ubuntu1) ... 152s Selecting previously unselected package libblas3:armhf. 152s Preparing to unpack .../01-libblas3_3.12.1-7_armhf.deb ... 152s Unpacking libblas3:armhf (3.12.1-7) ... 152s Selecting previously unselected package libgfortran5:armhf. 152s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_armhf.deb ... 152s Unpacking libgfortran5:armhf (15.2.0-7ubuntu1) ... 152s Selecting previously unselected package liblapack3:armhf. 152s Preparing to unpack .../03-liblapack3_3.12.1-7_armhf.deb ... 152s Unpacking liblapack3:armhf (3.12.1-7) ... 152s Selecting previously unselected package python3-numpy. 152s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_armhf.deb ... 152s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 152s Selecting previously unselected package libaec0:armhf. 152s Preparing to unpack .../05-libaec0_1.1.4-2_armhf.deb ... 152s Unpacking libaec0:armhf (1.1.4-2) ... 152s Selecting previously unselected package libsz2:armhf. 152s Preparing to unpack .../06-libsz2_1.1.4-2_armhf.deb ... 152s Unpacking libsz2:armhf (1.1.4-2) ... 152s Selecting previously unselected package libhdf5-310:armhf. 152s Preparing to unpack .../07-libhdf5-310_1.14.5+repack-4_armhf.deb ... 152s Unpacking libhdf5-310:armhf (1.14.5+repack-4) ... 152s Selecting previously unselected package libhdf5-hl-310:armhf. 152s Preparing to unpack .../08-libhdf5-hl-310_1.14.5+repack-4_armhf.deb ... 152s Unpacking libhdf5-hl-310:armhf (1.14.5+repack-4) ... 152s Selecting previously unselected package liblzf1:armhf. 152s Preparing to unpack .../09-liblzf1_3.6-4_armhf.deb ... 152s Unpacking liblzf1:armhf (3.6-4) ... 152s Selecting previously unselected package python3-decorator. 152s Preparing to unpack .../10-python3-decorator_5.2.1-2_all.deb ... 152s Unpacking python3-decorator (5.2.1-2) ... 152s Selecting previously unselected package python3-h5py-serial. 152s Preparing to unpack .../11-python3-h5py-serial_3.13.0-1ubuntu1_armhf.deb ... 152s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 152s Selecting previously unselected package python3-h5py. 152s Preparing to unpack .../12-python3-h5py_3.13.0-1ubuntu1_all.deb ... 152s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 152s Selecting previously unselected package python3-hdf5storage. 152s Preparing to unpack .../13-python3-hdf5storage_0.1.19-4_all.deb ... 152s Unpacking python3-hdf5storage (0.1.19-4) ... 152s Selecting previously unselected package python3-iniconfig. 152s Preparing to unpack .../14-python3-iniconfig_2.1.0-1_all.deb ... 152s Unpacking python3-iniconfig (2.1.0-1) ... 152s Selecting previously unselected package python3-pluggy. 152s Preparing to unpack .../15-python3-pluggy_1.6.0-1_all.deb ... 152s Unpacking python3-pluggy (1.6.0-1) ... 153s Selecting previously unselected package python3-pytest. 153s Preparing to unpack .../16-python3-pytest_8.4.2-1_all.deb ... 153s Unpacking python3-pytest (8.4.2-1) ... 153s Selecting previously unselected package python3-scipy. 153s Preparing to unpack .../17-python3-scipy_1.15.3-1ubuntu1_armhf.deb ... 153s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 153s Setting up python3-iniconfig (2.1.0-1) ... 153s Setting up libaec0:armhf (1.1.4-2) ... 153s Setting up python3-decorator (5.2.1-2) ... 154s Setting up libblas3:armhf (3.12.1-7) ... 154s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 154s Setting up liblzf1:armhf (3.6-4) ... 154s Setting up python3-numpy-dev:armhf (1:2.2.4+ds-1ubuntu1) ... 154s Setting up libgfortran5:armhf (15.2.0-7ubuntu1) ... 154s Setting up python3-pluggy (1.6.0-1) ... 154s Setting up libsz2:armhf (1.1.4-2) ... 154s Setting up liblapack3:armhf (3.12.1-7) ... 154s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 154s Setting up python3-pytest (8.4.2-1) ... 154s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 156s Setting up libhdf5-310:armhf (1.14.5+repack-4) ... 156s Setting up libhdf5-hl-310:armhf (1.14.5+repack-4) ... 156s Setting up python3-scipy (1.15.3-1ubuntu1) ... 160s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 161s Setting up python3-h5py (3.13.0-1ubuntu1) ... 161s Setting up python3-hdf5storage (0.1.19-4) ... 161s Processing triggers for man-db (2.13.1-1) ... 161s Processing triggers for libc-bin (2.42-2ubuntu2) ... 169s autopkgtest [17:16:28]: test command1: cp -a ./tests $AUTOPKGTEST_TMP; cd $AUTOPKGTEST_TMP; python3 -m pytest -v tests 169s autopkgtest [17:16:28]: test command1: [----------------------- 172s ============================= test session starts ============================== 172s platform linux -- Python 3.13.9, pytest-8.4.2, pluggy-1.6.0 -- /usr/bin/python3 172s cachedir: .pytest_cache 172s rootdir: /tmp/autopkgtest.Ta3qVn/autopkgtest_tmp 172s plugins: typeguard-4.4.2 172s collecting ... collected 5 items / 3 errors 172s 172s ==================================== ERRORS ==================================== 172s _________________ ERROR collecting tests/test_hdf5_filters.py __________________ 172s 'yield' keyword is allowed in fixtures, but not in tests (test_read_filtered_data) 172s _____________ ERROR collecting tests/test_matlab_compatibility.py ______________ 172s 'yield' keyword is allowed in fixtures, but not in tests (test_read_from_matlab) 172s ____________ ERROR collecting tests/test_string_utf16_conversion.py ____________ 172s 'yield' keyword is allowed in fixtures, but not in tests (test_conv_utf16) 172s =============================== warnings summary =============================== 172s ../../../usr/lib/python3/dist-packages/hdf5storage/utilities.py:44 172s /usr/lib/python3/dist-packages/hdf5storage/utilities.py:44: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 172s from pkg_resources import parse_version 172s 172s tests/test_write_readback.py:68 172s /tmp/autopkgtest.Ta3qVn/autopkgtest_tmp/tests/test_write_readback.py:68: PytestCollectionWarning: cannot collect test class 'TestPythonMatlabFormat' because it has a __init__ constructor (from: tests/test_write_readback.py) 172s class TestPythonMatlabFormat(object): 172s 172s tests/test_write_readback.py:669 172s /tmp/autopkgtest.Ta3qVn/autopkgtest_tmp/tests/test_write_readback.py:669: PytestCollectionWarning: cannot collect test class 'TestPythonFormat' because it has a __init__ constructor (from: tests/test_write_readback.py) 172s class TestPythonFormat(TestPythonMatlabFormat): 172s 172s tests/test_write_readback.py:702 172s /tmp/autopkgtest.Ta3qVn/autopkgtest_tmp/tests/test_write_readback.py:702: PytestCollectionWarning: cannot collect test class 'TestNoneFormat' because it has a __init__ constructor (from: tests/test_write_readback.py) 172s class TestNoneFormat(TestPythonMatlabFormat): 172s 172s tests/test_write_readback.py:741 172s /tmp/autopkgtest.Ta3qVn/autopkgtest_tmp/tests/test_write_readback.py:741: PytestCollectionWarning: cannot collect test class 'TestMatlabFormat' because it has a __init__ constructor (from: tests/test_write_readback.py) 172s class TestMatlabFormat(TestPythonMatlabFormat): 172s 172s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 172s =========================== short test summary info ============================ 172s ERROR tests/test_hdf5_filters.py - Failed: 'yield' keyword is allowed in fixt... 172s ERROR tests/test_matlab_compatibility.py - Failed: 'yield' keyword is allowed... 172s ERROR tests/test_string_utf16_conversion.py - Failed: 'yield' keyword is allo... 172s !!!!!!!!!!!!!!!!!!! Interrupted: 3 errors during collection !!!!!!!!!!!!!!!!!!!! 172s ======================== 5 warnings, 3 errors in 0.40s ========================= 173s autopkgtest [17:16:32]: test command1: -----------------------] 176s command1 FAIL non-zero exit status 2 176s autopkgtest [17:16:35]: test command1: - - - - - - - - - - results - - - - - - - - - - 180s autopkgtest [17:16:39]: @@@@@@@@@@@@@@@@@@@@ summary 180s command1 FAIL non-zero exit status 2