0s autopkgtest [20:31:36]: starting date and time: 2026-01-22 20:31:36+0000 0s autopkgtest [20:31:36]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [20:31:36]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.p5gj_jwv/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults --apt-upgrade python-ase --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.14.2-1 -- lxd -r lxd-armhf-10.145.243.221 lxd-armhf-10.145.243.221:autopkgtest/ubuntu/resolute/armhf 22s autopkgtest [20:31:58]: testbed dpkg architecture: armhf 24s autopkgtest [20:32:00]: testbed apt version: 3.1.12 28s autopkgtest [20:32:04]: @@@@@@@@@@@@@@@@@@@@ test bed setup 30s autopkgtest [20:32:06]: testbed release detected to be: None 38s autopkgtest [20:32:14]: updating testbed package index (apt update) 40s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 41s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [124 kB] 41s Get:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease [124 kB] 41s Get:4 http://ftpmaster.internal/ubuntu resolute-security InRelease [124 kB] 41s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2820 B] 41s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [81.6 kB] 41s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1011 kB] 42s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.2 kB] 42s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [95.3 kB] 42s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [658 kB] 43s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [4896 B] 43s Get:12 http://ftpmaster.internal/ubuntu resolute/multiverse Sources [310 kB] 43s Get:13 http://ftpmaster.internal/ubuntu resolute/main Sources [1398 kB] 44s Get:14 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.4 MB] 57s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1371 kB] 59s Get:16 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [15.2 MB] 70s Get:17 http://ftpmaster.internal/ubuntu resolute/multiverse armhf Packages [175 kB] 72s Fetched 42.2 MB in 32s (1322 kB/s) 74s Reading package lists... 80s autopkgtest [20:32:56]: upgrading testbed (apt dist-upgrade and autopurge) 81s Reading package lists... 82s Building dependency tree... 82s Reading state information... 82s Calculating upgrade... 83s The following packages were automatically installed and are no longer required: 83s libpython3.13-minimal libpython3.13-stdlib python3.13 python3.13-minimal 83s Use 'apt autoremove' to remove them. 83s The following NEW packages will be installed: 83s libpython3.14-minimal libpython3.14-stdlib python3.14 python3.14-minimal 83s The following packages will be upgraded: 83s libplymouth5 libpython3-stdlib plymouth plymouth-theme-ubuntu-text python3 83s python3-gdbm python3-minimal 83s 7 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 83s Need to get 6525 kB of archives. 83s After this operation, 22.5 MB of additional disk space will be used. 83s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.14-minimal armhf 3.14.2-1 [905 kB] 84s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14-minimal armhf 3.14.2-1 [2155 kB] 87s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-gdbm armhf 3.14.2-1 [11.1 kB] 87s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-minimal armhf 3.14.2-1 [28.2 kB] 87s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3 armhf 3.14.2-1 [22.9 kB] 87s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.14-stdlib armhf 3.14.2-1 [2270 kB] 90s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14 armhf 3.14.2-1 [816 kB] 91s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libpython3-stdlib armhf 3.14.2-1 [10.9 kB] 91s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf libplymouth5 armhf 24.004.60+git20250831.4a3c171d-0ubuntu4 [147 kB] 91s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf plymouth-theme-ubuntu-text armhf 24.004.60+git20250831.4a3c171d-0ubuntu4 [10.0 kB] 91s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf plymouth armhf 24.004.60+git20250831.4a3c171d-0ubuntu4 [150 kB] 92s Fetched 6525 kB in 8s (830 kB/s) 92s Selecting previously unselected package libpython3.14-minimal:armhf. 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66485 files and directories currently installed.) 92s Preparing to unpack .../libpython3.14-minimal_3.14.2-1_armhf.deb ... 92s Unpacking libpython3.14-minimal:armhf (3.14.2-1) ... 92s Selecting previously unselected package python3.14-minimal. 92s Preparing to unpack .../python3.14-minimal_3.14.2-1_armhf.deb ... 92s Unpacking python3.14-minimal (3.14.2-1) ... 92s Preparing to unpack .../python3-gdbm_3.14.2-1_armhf.deb ... 92s Unpacking python3-gdbm (3.14.2-1) over (3.13.9-1) ... 92s Setting up libpython3.14-minimal:armhf (3.14.2-1) ... 92s Setting up python3.14-minimal (3.14.2-1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66827 files and directories currently installed.) 94s Preparing to unpack .../python3-minimal_3.14.2-1_armhf.deb ... 94s Unpacking python3-minimal (3.14.2-1) over (3.13.7-1) ... 94s Setting up python3-minimal (3.14.2-1) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66827 files and directories currently installed.) 94s Preparing to unpack .../0-python3_3.14.2-1_armhf.deb ... 94s Unpacking python3 (3.14.2-1) over (3.13.7-1) ... 94s Selecting previously unselected package libpython3.14-stdlib:armhf. 94s Preparing to unpack .../1-libpython3.14-stdlib_3.14.2-1_armhf.deb ... 94s Unpacking libpython3.14-stdlib:armhf (3.14.2-1) ... 95s Selecting previously unselected package python3.14. 95s Preparing to unpack .../2-python3.14_3.14.2-1_armhf.deb ... 95s Unpacking python3.14 (3.14.2-1) ... 95s Preparing to unpack .../3-libpython3-stdlib_3.14.2-1_armhf.deb ... 95s Unpacking libpython3-stdlib:armhf (3.14.2-1) over (3.13.7-1) ... 95s Preparing to unpack .../4-libplymouth5_24.004.60+git20250831.4a3c171d-0ubuntu4_armhf.deb ... 95s Unpacking libplymouth5:armhf (24.004.60+git20250831.4a3c171d-0ubuntu4) over (24.004.60+git20250831.4a3c171d-0ubuntu3) ... 95s Preparing to unpack .../5-plymouth-theme-ubuntu-text_24.004.60+git20250831.4a3c171d-0ubuntu4_armhf.deb ... 95s Unpacking plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu4) over (24.004.60+git20250831.4a3c171d-0ubuntu3) ... 95s Preparing to unpack .../6-plymouth_24.004.60+git20250831.4a3c171d-0ubuntu4_armhf.deb ... 95s Unpacking plymouth (24.004.60+git20250831.4a3c171d-0ubuntu4) over (24.004.60+git20250831.4a3c171d-0ubuntu3) ... 95s Setting up libpython3.14-stdlib:armhf (3.14.2-1) ... 95s Setting up libplymouth5:armhf (24.004.60+git20250831.4a3c171d-0ubuntu4) ... 95s Setting up python3.14 (3.14.2-1) ... 97s Setting up libpython3-stdlib:armhf (3.14.2-1) ... 97s Setting up python3-gdbm (3.14.2-1) ... 97s Setting up plymouth (24.004.60+git20250831.4a3c171d-0ubuntu4) ... 97s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 97s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 97s Setting up python3 (3.14.2-1) ... 98s Processing triggers for libc-bin (2.42-2ubuntu4) ... 98s Processing triggers for systemd (259-1ubuntu2) ... 98s Processing triggers for man-db (2.13.1-1) ... 99s Processing triggers for initramfs-tools (0.150ubuntu7) ... 99s Setting up plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu4) ... 99s Processing triggers for initramfs-tools (0.150ubuntu7) ... 101s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s Solving dependencies... 103s The following packages will be REMOVED: 103s libpython3.13-minimal* libpython3.13-stdlib* python3.13* python3.13-minimal* 103s 0 upgraded, 0 newly installed, 4 to remove and 0 not upgraded. 103s After this operation, 21.3 MB disk space will be freed. 103s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 67257 files and directories currently installed.) 103s Removing python3.13 (3.13.11-1) ... 103s Removing libpython3.13-stdlib:armhf (3.13.11-1) ... 104s Removing python3.13-minimal (3.13.11-1) ... 105s Removing libpython3.13-minimal:armhf (3.13.11-1) ... 105s Processing triggers for man-db (2.13.1-1) ... 105s Processing triggers for systemd (259-1ubuntu2) ... 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66518 files and directories currently installed.) 105s Purging configuration files for libpython3.13-minimal:armhf (3.13.11-1) ... 106s Purging configuration files for python3.13-minimal (3.13.11-1) ... 108s autopkgtest [20:33:24]: rebooting testbed after setup commands that affected boot 151s autopkgtest [20:34:07]: testbed running kernel: Linux 6.8.0-87-generic #88~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 14 14:00:09 UTC 2 178s autopkgtest [20:34:34]: @@@@@@@@@@@@@@@@@@@@ apt-source python-ase 202s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-ase 3.26.0-2ubuntu1 (dsc) [2745 B] 202s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-ase 3.26.0-2ubuntu1 (tar) [2632 kB] 202s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-ase 3.26.0-2ubuntu1 (diff) [10.3 kB] 202s gpgv: Signature made Wed Nov 12 18:16:14 2025 UTC 202s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 202s gpgv: Can't check signature: No public key 202s dpkg-source: warning: cannot verify inline signature for ./python-ase_3.26.0-2ubuntu1.dsc: no acceptable signature found 203s autopkgtest [20:34:59]: testing package python-ase version 3.26.0-2ubuntu1 205s autopkgtest [20:35:01]: build not needed 208s autopkgtest [20:35:04]: test command1: preparing testbed 210s Reading package lists... 210s Building dependency tree... 210s Reading state information... 210s Solving dependencies... 211s The following NEW packages will be installed: 211s ase fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 211s fonts-lyx libaec0 libblas3 libdeflate0 libfontconfig1 libfreetype6 211s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 211s libhdf5-hl-310 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 211s libjs-bootstrap5 libjs-jquery libjs-jquery-ui liblapack3 liblcms2-2 liblerc4 211s libnetcdf22 libopenjp2-7 libpython3.13-minimal libpython3.13-stdlib 211s libqhull-r8.0 libraqm0 libsharpyuv0 libsymspg2 libsz2 libtcl8.6 libtiff6 211s libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 211s libxss1 libzopfli1 node-popper2 python-matplotlib-data python3-all 211s python3-ase python3-brotli python3-cftime python3-contourpy python3-cycler 211s python3-decorator python3-fonttools python3-iniconfig python3-kiwisolver 211s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-netcdf4 211s python3-numpy python3-numpy-dev python3-pil python3-pil.imagetk 211s python3-pluggy python3-pycodcif python3-pytest python3-pytest-mock 211s python3-scipy python3-spglib python3-sympy python3-tk python3-ufolib2 211s python3-zopfli python3.13 python3.13-minimal python3.13-tk python3.14-tk 211s unicode-data x11-common 212s 0 upgraded, 84 newly installed, 0 to remove and 0 not upgraded. 212s Need to get 84.5 MB of archives. 212s After this operation, 359 MB of additional disk space will be used. 212s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.13-minimal armhf 3.13.11-1 [875 kB] 213s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf python3.13-minimal armhf 3.13.11-1 [2055 kB] 215s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf python3-numpy-dev armhf 1:2.3.5+ds-3 [141 kB] 216s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libblas3 armhf 3.12.1-7ubuntu1 [133 kB] 216s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libgfortran5 armhf 15.2.0-11ubuntu1 [334 kB] 216s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf liblapack3 armhf 3.12.1-7ubuntu1 [2090 kB] 219s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf python3-numpy armhf 1:2.3.5+ds-3 [4729 kB] 223s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.13-stdlib armhf 3.13.11-1 [1960 kB] 224s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf python3.13 armhf 3.13.11-1 [758 kB] 225s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 226s Get:11 http://ftpmaster.internal/ubuntu resolute/universe armhf node-popper2 all 2.11.2-9 [106 kB] 226s Get:12 http://ftpmaster.internal/ubuntu resolute/universe armhf libjs-bootstrap5 all 5.3.8+dfsg-2 [480 kB] 226s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 226s Get:14 http://ftpmaster.internal/ubuntu resolute/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 227s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf python3-decorator all 5.2.1-2 [28.1 kB] 227s Get:16 http://ftpmaster.internal/ubuntu resolute/universe armhf libqhull-r8.0 armhf 2020.2-8 [175 kB] 227s Get:17 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-scipy armhf 1.16.3-3 [18.2 MB] 240s Get:18 http://ftpmaster.internal/ubuntu resolute/universe armhf libsymspg2 armhf 2.6.0-3build1 [193 kB] 240s Get:19 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-spglib armhf 2.6.0-3build1 [31.3 kB] 240s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-mono all 2.37-8build1 [502 kB] 240s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-core all 2.37-8build1 [834 kB] 241s Get:22 http://ftpmaster.internal/ubuntu resolute/universe armhf fonts-lyx all 2.5.0~RC2-3 [171 kB] 241s Get:23 http://ftpmaster.internal/ubuntu resolute/universe armhf python-matplotlib-data all 3.10.7+dfsg1-1 [2930 kB] 243s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf libfreetype6 armhf 2.14.1+dfsg-2 [345 kB] 243s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf libgomp1 armhf 15.2.0-11ubuntu1 [129 kB] 243s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 243s Get:27 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg-turbo8 armhf 2.1.5-4ubuntu2 [127 kB] 243s Get:28 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 243s Get:29 http://ftpmaster.internal/ubuntu resolute/main armhf liblcms2-2 armhf 2.17-1 [139 kB] 243s Get:30 http://ftpmaster.internal/ubuntu resolute/main armhf libopenjp2-7 armhf 2.5.4-1 [175 kB] 244s Get:31 http://ftpmaster.internal/ubuntu resolute/main armhf libgraphite2-3 armhf 1.3.14-11ubuntu1 [65.2 kB] 244s Get:32 http://ftpmaster.internal/ubuntu resolute/main armhf libharfbuzz0b armhf 12.3.0-4 [507 kB] 244s Get:33 http://ftpmaster.internal/ubuntu resolute/main armhf libraqm0 armhf 0.10.3-1 [12.7 kB] 244s Get:34 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate0 armhf 1.23-2 [38.7 kB] 244s Get:35 http://ftpmaster.internal/ubuntu resolute/main armhf libjbig0 armhf 2.1-6.1ubuntu3 [25.3 kB] 244s Get:36 http://ftpmaster.internal/ubuntu resolute/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu2 [162 kB] 244s Get:37 http://ftpmaster.internal/ubuntu resolute/main armhf libsharpyuv0 armhf 1.5.0-0.1build1 [16.3 kB] 244s Get:38 http://ftpmaster.internal/ubuntu resolute/main armhf libwebp7 armhf 1.5.0-0.1build1 [189 kB] 244s Get:39 http://ftpmaster.internal/ubuntu resolute/main armhf libtiff6 armhf 4.7.0-3ubuntu3 [188 kB] 244s Get:40 http://ftpmaster.internal/ubuntu resolute/main armhf libwebpdemux2 armhf 1.5.0-0.1build1 [11.7 kB] 244s Get:41 http://ftpmaster.internal/ubuntu resolute/main armhf libwebpmux3 armhf 1.5.0-0.1build1 [22.4 kB] 244s Get:42 http://ftpmaster.internal/ubuntu resolute/main armhf python3-pil armhf 12.0.0-1ubuntu1 [462 kB] 245s Get:43 http://ftpmaster.internal/ubuntu resolute/main armhf libtcl8.6 armhf 8.6.17+dfsg-1 [918 kB] 245s Get:44 http://ftpmaster.internal/ubuntu resolute/main armhf fontconfig-config armhf 2.15.0-2.4ubuntu1 [38.2 kB] 245s Get:45 http://ftpmaster.internal/ubuntu resolute/main armhf libfontconfig1 armhf 2.15.0-2.4ubuntu1 [116 kB] 245s Get:46 http://ftpmaster.internal/ubuntu resolute/main armhf libxrender1 armhf 1:0.9.12-1 [16.6 kB] 245s Get:47 http://ftpmaster.internal/ubuntu resolute/main armhf libxft2 armhf 2.3.6-1build2 [37.2 kB] 246s Get:48 http://ftpmaster.internal/ubuntu resolute/main armhf x11-common all 1:7.7+24ubuntu1 [22.4 kB] 246s Get:49 http://ftpmaster.internal/ubuntu resolute/main armhf libxss1 armhf 1:1.2.3-1build4 [6328 B] 246s Get:50 http://ftpmaster.internal/ubuntu resolute/main armhf libtk8.6 armhf 8.6.17-1 [694 kB] 246s Get:51 http://ftpmaster.internal/ubuntu resolute/main armhf python3.13-tk armhf 3.13.11-1 [104 kB] 246s Get:52 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14-tk armhf 3.14.2-1 [105 kB] 246s Get:53 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-tk armhf 3.14.2-1 [11.2 kB] 246s Get:54 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pil.imagetk armhf 12.0.0-1ubuntu1 [9168 B] 246s Get:55 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-contourpy armhf 1.3.3-1 [268 kB] 246s Get:56 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-cycler all 0.12.1-2 [9850 B] 246s Get:57 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-brotli armhf 1.1.0-2build6 [327 kB] 247s Get:58 http://ftpmaster.internal/ubuntu resolute/main armhf libxslt1.1 armhf 1.1.43-0.3 [146 kB] 247s Get:59 http://ftpmaster.internal/ubuntu resolute/main armhf python3-lxml armhf 6.0.2-1 [2260 kB] 249s Get:60 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-lz4 armhf 4.4.5+dfsg-1 [26.1 kB] 249s Get:61 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-mpmath all 1.3.0-2 [423 kB] 249s Get:62 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-sympy all 1.14.0-2 [4306 kB] 253s Get:63 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-ufolib2 all 0.18.1+dfsg1-1 [33.7 kB] 253s Get:64 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-all armhf 3.14.2-1 [888 B] 253s Get:65 http://ftpmaster.internal/ubuntu resolute/universe armhf libzopfli1 armhf 1.0.3-3 [91.7 kB] 253s Get:66 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-zopfli armhf 0.4.0-1 [10.5 kB] 253s Get:67 http://ftpmaster.internal/ubuntu resolute/universe armhf unicode-data all 16.0.0-1build1 [9543 kB] 263s Get:68 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-fonttools armhf 4.61.1-3 [1697 kB] 264s Get:69 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-kiwisolver armhf 1.4.10~rc0-1 [77.8 kB] 264s Get:70 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-matplotlib armhf 3.10.7+dfsg1-1 [17.2 MB] 277s Get:71 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-ase all 3.26.0-2ubuntu1 [1803 kB] 278s Get:72 http://ftpmaster.internal/ubuntu resolute/universe armhf ase all 3.26.0-2ubuntu1 [31.1 kB] 278s Get:73 http://ftpmaster.internal/ubuntu resolute/universe armhf libaec0 armhf 1.1.4-2 [21.1 kB] 278s Get:74 http://ftpmaster.internal/ubuntu resolute/universe armhf libsz2 armhf 1.1.4-2 [5322 B] 278s Get:75 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-310 armhf 1.14.5+repack-4 [1422 kB] 279s Get:76 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-4 [58.7 kB] 279s Get:77 http://ftpmaster.internal/ubuntu resolute/universe armhf libnetcdf22 armhf 1:4.9.3-1build1 [511 kB] 280s Get:78 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-cftime armhf 1.6.5-1 [506 kB] 280s Get:79 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-iniconfig all 2.1.0-2 [6962 B] 280s Get:80 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-netcdf4 armhf 1.7.4-1 [873 kB] 281s Get:81 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pluggy all 1.6.0-2 [21.1 kB] 281s Get:82 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pycodcif armhf 3.11.0+dfsg-2 [69.6 kB] 281s Get:83 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pytest all 9.0.2-2 [277 kB] 281s Get:84 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pytest-mock all 3.15.1-1 [11.9 kB] 282s Fetched 84.5 MB in 1min 10s (1213 kB/s) 282s Selecting previously unselected package libpython3.13-minimal:armhf. 282s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66518 files and directories currently installed.) 282s Preparing to unpack .../00-libpython3.13-minimal_3.13.11-1_armhf.deb ... 282s Unpacking libpython3.13-minimal:armhf (3.13.11-1) ... 282s Selecting previously unselected package python3.13-minimal. 282s Preparing to unpack .../01-python3.13-minimal_3.13.11-1_armhf.deb ... 282s Unpacking python3.13-minimal (3.13.11-1) ... 282s Selecting previously unselected package python3-numpy-dev:armhf. 282s Preparing to unpack .../02-python3-numpy-dev_1%3a2.3.5+ds-3_armhf.deb ... 282s Unpacking python3-numpy-dev:armhf (1:2.3.5+ds-3) ... 282s Selecting previously unselected package libblas3:armhf. 282s Preparing to unpack .../03-libblas3_3.12.1-7ubuntu1_armhf.deb ... 282s Unpacking libblas3:armhf (3.12.1-7ubuntu1) ... 282s Selecting previously unselected package libgfortran5:armhf. 282s Preparing to unpack .../04-libgfortran5_15.2.0-11ubuntu1_armhf.deb ... 282s Unpacking libgfortran5:armhf (15.2.0-11ubuntu1) ... 282s Selecting previously unselected package liblapack3:armhf. 282s Preparing to unpack .../05-liblapack3_3.12.1-7ubuntu1_armhf.deb ... 282s Unpacking liblapack3:armhf (3.12.1-7ubuntu1) ... 282s Selecting previously unselected package python3-numpy. 282s Preparing to unpack .../06-python3-numpy_1%3a2.3.5+ds-3_armhf.deb ... 282s Unpacking python3-numpy (1:2.3.5+ds-3) ... 283s Selecting previously unselected package libpython3.13-stdlib:armhf. 283s Preparing to unpack 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.../12-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 283s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 283s Selecting previously unselected package libjs-jquery-ui. 283s Preparing to unpack .../13-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 283s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 283s Selecting previously unselected package python3-decorator. 283s Preparing to unpack .../14-python3-decorator_5.2.1-2_all.deb ... 283s Unpacking python3-decorator (5.2.1-2) ... 283s Selecting previously unselected package libqhull-r8.0:armhf. 283s Preparing to unpack .../15-libqhull-r8.0_2020.2-8_armhf.deb ... 283s Unpacking libqhull-r8.0:armhf (2020.2-8) ... 283s Selecting previously unselected package python3-scipy. 283s Preparing to unpack .../16-python3-scipy_1.16.3-3_armhf.deb ... 283s Unpacking python3-scipy (1.16.3-3) ... 284s Selecting previously unselected package libsymspg2:armhf. 284s Preparing to unpack .../17-libsymspg2_2.6.0-3build1_armhf.deb ... 284s 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liblcms2-2:armhf. 285s Preparing to unpack .../28-liblcms2-2_2.17-1_armhf.deb ... 285s Unpacking liblcms2-2:armhf (2.17-1) ... 285s Selecting previously unselected package libopenjp2-7:armhf. 285s Preparing to unpack .../29-libopenjp2-7_2.5.4-1_armhf.deb ... 285s Unpacking libopenjp2-7:armhf (2.5.4-1) ... 285s Selecting previously unselected package libgraphite2-3:armhf. 285s Preparing to unpack .../30-libgraphite2-3_1.3.14-11ubuntu1_armhf.deb ... 285s Unpacking libgraphite2-3:armhf (1.3.14-11ubuntu1) ... 285s Selecting previously unselected package libharfbuzz0b:armhf. 285s Preparing to unpack .../31-libharfbuzz0b_12.3.0-4_armhf.deb ... 285s Unpacking libharfbuzz0b:armhf (12.3.0-4) ... 285s Selecting previously unselected package libraqm0:armhf. 285s Preparing to unpack .../32-libraqm0_0.10.3-1_armhf.deb ... 285s Unpacking libraqm0:armhf (0.10.3-1) ... 285s Selecting previously unselected package libdeflate0:armhf. 285s Preparing to unpack .../33-libdeflate0_1.23-2_armhf.deb ... 285s 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unselected package libwebpdemux2:armhf. 285s Preparing to unpack .../39-libwebpdemux2_1.5.0-0.1build1_armhf.deb ... 285s Unpacking libwebpdemux2:armhf (1.5.0-0.1build1) ... 285s Selecting previously unselected package libwebpmux3:armhf. 285s Preparing to unpack .../40-libwebpmux3_1.5.0-0.1build1_armhf.deb ... 285s Unpacking libwebpmux3:armhf (1.5.0-0.1build1) ... 285s Selecting previously unselected package python3-pil:armhf. 285s Preparing to unpack .../41-python3-pil_12.0.0-1ubuntu1_armhf.deb ... 285s Unpacking python3-pil:armhf (12.0.0-1ubuntu1) ... 286s Selecting previously unselected package libtcl8.6:armhf. 286s Preparing to unpack .../42-libtcl8.6_8.6.17+dfsg-1_armhf.deb ... 286s Unpacking libtcl8.6:armhf (8.6.17+dfsg-1) ... 286s Selecting previously unselected package fontconfig-config. 286s Preparing to unpack .../43-fontconfig-config_2.15.0-2.4ubuntu1_armhf.deb ... 286s Unpacking fontconfig-config (2.15.0-2.4ubuntu1) ... 286s Selecting previously unselected package libfontconfig1:armhf. 286s Preparing to unpack .../44-libfontconfig1_2.15.0-2.4ubuntu1_armhf.deb ... 286s Unpacking libfontconfig1:armhf (2.15.0-2.4ubuntu1) ... 286s Selecting previously unselected package libxrender1:armhf. 286s Preparing to unpack .../45-libxrender1_1%3a0.9.12-1_armhf.deb ... 286s Unpacking libxrender1:armhf (1:0.9.12-1) ... 286s Selecting previously unselected package libxft2:armhf. 286s Preparing to unpack .../46-libxft2_2.3.6-1build2_armhf.deb ... 286s Unpacking libxft2:armhf (2.3.6-1build2) ... 286s Selecting previously unselected package x11-common. 286s Preparing to unpack .../47-x11-common_1%3a7.7+24ubuntu1_all.deb ... 286s Unpacking x11-common (1:7.7+24ubuntu1) ... 286s Selecting previously unselected package libxss1:armhf. 286s Preparing to unpack .../48-libxss1_1%3a1.2.3-1build4_armhf.deb ... 286s Unpacking libxss1:armhf (1:1.2.3-1build4) ... 286s Selecting previously unselected package libtk8.6:armhf. 286s Preparing to unpack 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unicode-data. 288s Preparing to unpack .../66-unicode-data_16.0.0-1build1_all.deb ... 288s Unpacking unicode-data (16.0.0-1build1) ... 288s Selecting previously unselected package python3-fonttools. 288s Preparing to unpack .../67-python3-fonttools_4.61.1-3_armhf.deb ... 288s Unpacking python3-fonttools (4.61.1-3) ... 288s Selecting previously unselected package python3-kiwisolver. 288s Preparing to unpack .../68-python3-kiwisolver_1.4.10~rc0-1_armhf.deb ... 288s Unpacking python3-kiwisolver (1.4.10~rc0-1) ... 288s Selecting previously unselected package python3-matplotlib. 288s Preparing to unpack .../69-python3-matplotlib_3.10.7+dfsg1-1_armhf.deb ... 288s Unpacking python3-matplotlib (3.10.7+dfsg1-1) ... 289s Selecting previously unselected package python3-ase. 289s Preparing to unpack .../70-python3-ase_3.26.0-2ubuntu1_all.deb ... 289s Unpacking python3-ase (3.26.0-2ubuntu1) ... 289s Selecting previously unselected package ase. 289s Preparing to unpack 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290s Selecting previously unselected package python3-cftime. 290s Preparing to unpack .../77-python3-cftime_1.6.5-1_armhf.deb ... 290s Unpacking python3-cftime (1.6.5-1) ... 290s Selecting previously unselected package python3-iniconfig. 290s Preparing to unpack .../78-python3-iniconfig_2.1.0-2_all.deb ... 290s Unpacking python3-iniconfig (2.1.0-2) ... 290s Selecting previously unselected package python3-netcdf4. 290s Preparing to unpack .../79-python3-netcdf4_1.7.4-1_armhf.deb ... 290s Unpacking python3-netcdf4 (1.7.4-1) ... 290s Selecting previously unselected package python3-pluggy. 290s Preparing to unpack .../80-python3-pluggy_1.6.0-2_all.deb ... 290s Unpacking python3-pluggy (1.6.0-2) ... 290s Selecting previously unselected package python3-pycodcif. 290s Preparing to unpack .../81-python3-pycodcif_3.11.0+dfsg-2_armhf.deb ... 290s Unpacking python3-pycodcif (3.11.0+dfsg-2) ... 290s Selecting previously unselected package python3-pytest. 290s Preparing to unpack .../82-python3-pytest_9.0.2-2_all.deb ... 290s Unpacking python3-pytest (9.0.2-2) ... 290s Selecting previously unselected package python3-pytest-mock. 290s Preparing to unpack .../83-python3-pytest-mock_3.15.1-1_all.deb ... 290s Unpacking python3-pytest-mock (3.15.1-1) ... 290s Setting up libgraphite2-3:armhf (1.3.14-11ubuntu1) ... 290s Setting up liblcms2-2:armhf (2.17-1) ... 290s Setting up python3-iniconfig (2.1.0-2) ... 291s Setting up libsharpyuv0:armhf (1.5.0-0.1build1) ... 291s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu2) ... 291s Setting up libxrender1:armhf (1:0.9.12-1) ... 291s Setting up python3-lz4 (4.4.5+dfsg-1) ... 291s Setting up fonts-lyx (2.5.0~RC2-3) ... 291s Setting up x11-common (1:7.7+24ubuntu1) ... 291s Setting up libdeflate0:armhf (1.23-2) ... 291s Setting up libqhull-r8.0:armhf (2020.2-8) ... 291s Setting up python3-pycodcif (3.11.0+dfsg-2) ... 292s Setting up libgomp1:armhf (15.2.0-11ubuntu1) ... 292s Setting up libjbig0:armhf (2.1-6.1ubuntu3) ... 292s Setting up libaec0:armhf (1.1.4-2) ... 292s Setting up unicode-data (16.0.0-1build1) ... 292s Setting up libsymspg2:armhf (2.6.0-3build1) ... 292s Setting up libpython3.13-minimal:armhf (3.13.11-1) ... 292s Setting up python3-decorator (5.2.1-2) ... 292s Setting up libblas3:armhf (3.12.1-7ubuntu1) ... 292s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 292s Setting up libzopfli1 (1.0.3-3) ... 292s Setting up libfreetype6:armhf (2.14.1+dfsg-2) ... 292s Setting up python3-brotli (1.1.0-2build6) ... 292s Setting up python3-cycler (0.12.1-2) ... 293s Setting up libimagequant0:armhf (2.18.0-1build1) ... 293s Setting up fonts-dejavu-mono (2.37-8build1) ... 293s Setting up python3-kiwisolver (1.4.10~rc0-1) ... 293s Setting up python3-numpy-dev:armhf (1:2.3.5+ds-3) ... 293s Setting up libtcl8.6:armhf (8.6.17+dfsg-1) ... 293s Setting up fonts-dejavu-core (2.37-8build1) ... 293s Setting up libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 293s Setting up libgfortran5:armhf (15.2.0-11ubuntu1) ... 293s Setting up python3-pluggy (1.6.0-2) ... 293s Setting up libwebp7:armhf (1.5.0-0.1build1) ... 293s Setting up node-popper2 (2.11.2-9) ... 293s Setting up libxslt1.1:armhf (1.1.43-0.3) ... 293s Setting up libopenjp2-7:armhf (2.5.4-1) ... 293s Setting up python3.13-minimal (3.13.11-1) ... 294s Setting up libharfbuzz0b:armhf (12.3.0-4) ... 294s Setting up libxss1:armhf (1:1.2.3-1build4) ... 294s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 294s Setting up python3-mpmath (1.3.0-2) ... 296s Setting up python-matplotlib-data (3.10.7+dfsg1-1) ... 296s Setting up libwebpmux3:armhf (1.5.0-0.1build1) ... 296s Setting up libjs-bootstrap5 (5.3.8+dfsg-2) ... 296s Setting up libpython3.13-stdlib:armhf (3.13.11-1) ... 296s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 296s Setting up libsz2:armhf (1.1.4-2) ... 296s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 296s Setting up python3-sympy (1.14.0-2) ... 305s /usr/lib/python3/dist-packages/sympy/testing/runtests.py:283: SyntaxWarning: 'return' in a 'finally' block 305s return p.returncode 313s Setting up liblapack3:armhf (3.12.1-7ubuntu1) ... 313s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 313s Setting up python3.13 (3.13.11-1) ... 315s Setting up fontconfig-config (2.15.0-2.4ubuntu1) ... 315s Setting up python3-pytest (9.0.2-2) ... 316s Setting up libwebpdemux2:armhf (1.5.0-0.1build1) ... 316s Setting up python3-all (3.14.2-1) ... 316s Setting up python3-zopfli (0.4.0-1) ... 317s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ... 317s Setting up libraqm0:armhf (0.10.3-1) ... 317s Setting up python3-numpy (1:2.3.5+ds-3) ... 323s Setting up libhdf5-310:armhf (1.14.5+repack-4) ... 323s Setting up python3-pytest-mock (3.15.1-1) ... 324s Setting up python3-lxml:armhf (6.0.2-1) ... 324s Setting up libtiff6:armhf (4.7.0-3ubuntu3) ... 324s Setting up python3-contourpy (1.3.3-1) ... 325s Setting up libfontconfig1:armhf (2.15.0-2.4ubuntu1) ... 325s Setting up python3-spglib (2.6.0-3build1) ... 325s Setting up libhdf5-hl-310:armhf (1.14.5+repack-4) ... 325s Setting up libxft2:armhf (2.3.6-1build2) ... 325s Setting up python3-scipy (1.16.3-3) ... 338s Setting up libtk8.6:armhf (8.6.17-1) ... 338s Setting up libnetcdf22:armhf (1:4.9.3-1build1) ... 338s Setting up python3.13-tk (3.13.11-1) ... 338s Setting up python3-pil:armhf (12.0.0-1ubuntu1) ... 339s Setting up python3-cftime (1.6.5-1) ... 340s Setting up python3-netcdf4 (1.7.4-1) ... 340s Setting up python3.14-tk (3.14.2-1) ... 340s Setting up python3-tk (3.14.2-1) ... 340s Setting up python3-pil.imagetk:armhf (12.0.0-1ubuntu1) ... 340s Setting up python3-fonttools (4.61.1-3) ... 343s Setting up python3-ufolib2 (0.18.1+dfsg1-1) ... 344s Setting up python3-matplotlib (3.10.7+dfsg1-1) ... 348s Setting up python3-ase (3.26.0-2ubuntu1) ... 355s Setting up ase (3.26.0-2ubuntu1) ... 355s Processing triggers for libc-bin (2.42-2ubuntu4) ... 355s Processing triggers for systemd (259-1ubuntu2) ... 355s Processing triggers for man-db (2.13.1-1) ... 365s autopkgtest [20:37:41]: test command1: for py in $(py3versions -s); do cd "$AUTOPKGTEST_TMP"; $py -m ase test --pytest -p no:cacheprovider; done 365s autopkgtest [20:37:41]: test command1: [----------------------- 368s About to run pytest with these parameters: 368s -p 368s no:cacheprovider 377s ============================= test session starts ============================== 377s platform linux -- Python 3.13.11, pytest-9.0.2, pluggy-1.6.0 377s 377s Libraries 377s ========= 377s 377s ase-3.26.0 /usr/lib/python3/dist-packages/ase 377s numpy-2.3.5 /usr/lib/python3/dist-packages/numpy 377s scipy-1.16.3 /usr/lib/python3/dist-packages/scipy 377s matplotlib-3.10.7+dfsg1 /usr/lib/python3/dist-packages/matplotlib 377s spglib-2.6.0 /usr/lib/python3/dist-packages/spglib 377s ase_ext not installed 377s flask not installed 377s psycopg2 not installed 377s pyamg not installed 377s 377s 377s Calculators 377s =========== 377s Config: No configuration file specified 377s Datafiles: ase-datafiles package not installed 377s 377s [ ] abinit not installed: 'abinit' 377s [ ] ace cfg= 377s [ ] aims not installed: 'aims' 377s [ ] amber cfg= 377s [ ] asap not installed: asap3 377s [ ] castep not installed: 'castep' 377s [ ] cp2k not installed: 'cp2k' 377s [ ] crystal cfg= 377s [ ] demon cfg= 377s [ ] demonnano cfg= 377s [ ] dftb not installed: No 'dftb' section 377s [ ] dftd3 not installed: 'dftd3' 377s [ ] dmol cfg= 377s [ ] elk not installed: 'elk' 377s [ ] espresso not installed: 'espresso' 377s [ ] exciting not installed: 'exciting' 377s [ ] gamess_us cfg= 377s [ ] gaussian cfg= 377s [ ] gpaw not installed: gpaw 377s [ ] gromacs not installed: 'gromacs' 377s [ ] gulp cfg= 377s [ ] hotbit cfg= 377s [ ] lammpslib not installed: missing python wrappers: cannot import lammps 377s [ ] lammpsrun not installed: 'lammps' 377s [ ] mopac not installed: No 'mopac' section 377s [ ] nwchem not installed: No 'nwchem' section 377s [ ] octopus not installed: 'octopus' 377s [ ] onetep cfg= 377s [ ] openmx not installed: 'openmx' 377s [ ] orca not installed: 'orca' 377s [ ] plumed not installed: 377s [ ] psi4 not installed: psi4 377s [ ] qchem cfg= 377s [ ] siesta not installed: No 'siesta' section 377s [ ] turbomole cfg= 377s [ ] vasp not installed: 'vasp' 377s 377s * Use --calculators option to select calculators. 377s 377s * See "ase test --help-calculators" on how to configure calculators. 377s 377s * This listing only includes external calculators known by the test 377s system. Others are "configured" by setting an environment variable 377s like "ASE_xxx_COMMAND" in order to allow tests to run. Please see 377s the documentation of that individual calculator. 377s 377s 377s rootdir: /usr/lib/python3/dist-packages/ase/test 377s configfile: pytest.ini 377s plugins: typeguard-4.4.4, mock-3.15.1 377s collected 3614 items 377s 377s atoms/test_atom.py .. [ 0%] 377s atoms/test_atom_scaled_pos.py ... [ 0%] 377s atoms/test_atoms.py .............. [ 0%] 377s atoms/test_atoms_angle.py . [ 0%] 377s atoms/test_atoms_distance.py .. [ 0%] 377s atoms/test_atoms_formula.py . [ 0%] 377s atoms/test_atoms_get_duplicates.py ... [ 0%] 377s atoms/test_atoms_get_positions.py ... [ 0%] 377s atoms/test_atoms_getitem.py ............. [ 1%] 377s atoms/test_atoms_indices.py . [ 1%] 377s atoms/test_atoms_info_copy.py . [ 1%] 377s atoms/test_atoms_instantiation.py .... [ 1%] 377s atoms/test_build.py . [ 1%] 377s atoms/test_center.py ........... [ 1%] 377s atoms/test_center_nonperiodic.py . [ 1%] 377s atoms/test_compare_atoms.py . [ 1%] 377s atoms/test_deprecated_get_set.py ... [ 1%] 377s atoms/test_get_angles.py . [ 1%] 377s atoms/test_h2.py . [ 1%] 377s atoms/test_mic.py . [ 1%] 377s atoms/test_momenta_velocities.py ... [ 1%] 377s atoms/test_permute_axes.py . [ 1%] 377s atoms/test_rotate.py . [ 2%] 377s atoms/test_rotate_euler.py . [ 2%] 377s atoms/test_scaled_positions.py . [ 2%] 377s atoms/test_set_get_angle.py . [ 2%] 377s bandstructure/test_bandpath.py ....... [ 2%] 378s bandstructure/test_bandstructure.py .... [ 2%] 378s bandstructure/test_bandstructure_json.py . [ 2%] 383s bandstructure/test_bandstructure_many.py ....................... [ 3%] 383s bandstructure/test_bandstructure_transform_mcl.py . [ 3%] 383s bandstructure/test_resolve_custom_kpoints.py ..... [ 3%] 383s bravais/test_2d_cell_pbc.py ..... [ 3%] 384s bravais/test_bravais_type_engine.py ................. [ 3%] 384s bravais/test_eps.py .. [ 3%] 384s bravais/test_hex.py . [ 3%] 385s bravais/test_lattices.py ............................................... [ 5%] 385s .. [ 5%] 385s bravais/test_line_lattice.py . [ 5%] 385s bravais/test_main.py ......................... [ 6%] 385s bravais/test_orcc_mcl.py . [ 6%] 385s bravais/test_reduce.py . [ 6%] 385s bravais/test_standard_form.py ....................... [ 6%] 385s build_/test_attach.py .... [ 6%] 386s build_/test_build_bulk.py .............................................. [ 8%] 386s ........................................................................ [ 10%] 386s ........................................................................ [ 12%] 386s .................................................. [ 13%] 387s build_/test_bulk.py .......... [ 13%] 387s build_/test_connected.py .... [ 13%] 387s build_/test_minimize_rotation_and_translation.py .. [ 13%] 388s build_/test_supercells.py .............................................. [ 15%] 393s .......................... [ 15%] 393s build_/test_surface.py ... [ 15%] 393s build_/test_surface_stack.py . [ 15%] 393s build_/test_surface_terminations.py . [ 16%] 393s calculator/abinit/test_abinit_cmdline.py s [ 16%] 393s calculator/abinit/test_main.py sssssssss [ 16%] 393s calculator/ace/test_ace.py s [ 16%] 393s calculator/ace/test_ace_calculator.py . [ 16%] 393s calculator/aims/test_H2O_aims.py s [ 16%] 393s calculator/aims/test_aims_interface.py s [ 16%] 393s calculator/aims/test_version.py . [ 16%] 393s calculator/amber/test_amber.py s [ 16%] 393s calculator/castep/test_castep_interface.py ........ [ 16%] 393s calculator/cp2k/test_cp2k_H2_None.py s [ 16%] 393s calculator/cp2k/test_cp2k_dcd.py s [ 16%] 393s calculator/cp2k/test_cp2k_many.py ssssssssssss [ 17%] 393s calculator/cp2k/test_cp2k_restart.py . [ 17%] 393s calculator/cp2k/test_cp2k_stress.py s [ 17%] 393s calculator/crystal/test_bulk.py s [ 17%] 393s calculator/crystal/test_graphene.py s [ 17%] 393s calculator/crystal/test_molecule.py s [ 17%] 393s calculator/demon/test_h2o.py s [ 17%] 393s calculator/demon/test_h2o_xas_xes.py s [ 17%] 393s calculator/demonnano/test_h2o.py s [ 17%] 393s calculator/dftb/test_dftb_bandstructure.py s [ 17%] 393s calculator/dftb/test_dftb_relax_bulk.py .s [ 17%] 393s calculator/dftb/test_dftb_relax_dimer.py s [ 17%] 393s calculator/dftb/test_dftb_relax_surface.py s [ 17%] 393s calculator/dftb/test_dipole.py s [ 17%] 393s calculator/dftb/test_xtb_static.py s [ 17%] 393s calculator/dmol/test_Al_dmol.py s [ 17%] 393s calculator/dmol/test_water_dmol.py s [ 17%] 393s calculator/elk/test_elk.py ss [ 17%] 393s calculator/espresso/test_espresso.py ..ssss.. [ 17%] 393s calculator/exciting/test_exciting.py sssss [ 17%] 393s calculator/exciting/test_runner.py ssss. [ 18%] 393s calculator/gamess_us/test_basis_ecp.py s [ 18%] 393s calculator/gamess_us/test_gamess_us.py sssss [ 18%] 393s calculator/gaussian/test_h2of.py s [ 18%] 393s calculator/gaussian/test_optimizer_irc.py ss [ 18%] 393s calculator/gaussian/test_water.py s [ 18%] 393s calculator/gpaw_/test_no_spin_and_spin.py s [ 18%] 393s calculator/gpaw_/test_read_text_output.py . [ 18%] 396s calculator/gpaw_/test_wannier.py ...........................ssssssssssss [ 19%] 396s ssssssssssssssssssssssssssssssssssssssssssssssssssssssss....ssss [ 21%] 396s calculator/gromacs/test_gromacs.py .ss [ 21%] 396s calculator/kim/test_cutoff_skin.py s [ 21%] 396s calculator/kim/test_energy_forces_stress.py s [ 21%] 396s calculator/kim/test_modify_parameters.py s [ 21%] 396s calculator/kim/test_multi_neighlist.py s [ 21%] 396s calculator/kim/test_relax.py s [ 21%] 396s calculator/kim/test_single_atom.py s [ 21%] 396s calculator/kim/test_update_coords.py s [ 21%] 396s calculator/kim/test_update_neighbor_parameters.py s [ 21%] 396s calculator/lammps/test_prism.py ........................................ [ 22%] 396s . [ 22%] 396s calculator/lammpslib/test_Pt_stress_cellopt.py s [ 22%] 396s calculator/lammpslib/test_lammpslib_change_cell_bcs.py s [ 22%] 396s calculator/lammpslib/test_lammpslib_neighlist_bug.py s [ 22%] 396s calculator/lammpslib/test_lammpslib_post_changebox_cmds.py s [ 22%] 396s calculator/lammpslib/test_lammpslib_simple.py sssss [ 22%] 396s calculator/lammpslib/test_lammpslib_small_nonperiodic.py s [ 22%] 396s calculator/lammpsrun/test_Ar_minimize.py ss [ 23%] 396s calculator/lammpsrun/test_NaCl_minimize.py s [ 23%] 396s calculator/lammpsrun/test_Pt_md_constraints_multistep.py s [ 23%] 396s calculator/lammpsrun/test_Pt_stress_cellopt.py s [ 23%] 396s calculator/lammpsrun/test_lammps_units.py s [ 23%] 396s calculator/lammpsrun/test_no_data_file_wrap.py s [ 23%] 396s calculator/nwchem/test_nwchem_bands.py s [ 23%] 396s calculator/nwchem/test_nwchem_broken_symmetry.py s [ 23%] 396s calculator/nwchem/test_nwchem_cmdline.py s [ 23%] 396s calculator/nwchem/test_nwchem_eigenvalues.py ss [ 23%] 396s calculator/nwchem/test_nwchem_h3o2m.py s [ 23%] 396s calculator/nwchem/test_nwchem_multitask.py sss [ 23%] 396s calculator/nwchem/test_nwchem_parser.py . [ 23%] 396s calculator/nwchem/test_nwchem_runmany.py ssssssssssssss [ 23%] 396s calculator/nwchem/test_nwchem_spin_symmetry.py s [ 23%] 396s calculator/nwchem/test_nwchem_stress.py s [ 23%] 396s calculator/nwchem/test_nwchem_version.py s [ 23%] 396s calculator/octopus/test_big.py ss [ 23%] 396s calculator/onetep/test_onetep.py s [ 24%] 396s calculator/openmx/test_md.py s [ 24%] 396s calculator/openmx/test_version.py . [ 24%] 396s calculator/plumed/test_plumed.py ssssss [ 24%] 396s calculator/psi4/test_psi4_HF_3_21G.py s [ 24%] 396s calculator/qchem/test_qchem_calculator.py s [ 24%] 396s calculator/siesta/lrtddft/test_siesta_lrtddft.py s [ 24%] 396s calculator/siesta/lrtddft/test_siesta_raman.py s [ 24%] 396s calculator/siesta/test_bandstructure.py s [ 24%] 396s calculator/siesta/test_dos.py s [ 24%] 396s calculator/siesta/test_fdf_io.py s [ 24%] 396s calculator/siesta/test_siesta_read_eigenvalues.py .s [ 24%] 396s calculator/siesta/test_siesta_version.py . [ 24%] 396s calculator/siesta/test_siesta_zmat.py sss [ 24%] 396s calculator/siesta/test_write_input.py sssss [ 24%] 396s calculator/socketio/test_h2_stiffness.py sssss [ 24%] 396s calculator/socketio/test_integration.py ss [ 24%] 396s calculator/socketio/test_ipi_protocol_bfgs.py ss [ 24%] 398s calculator/socketio/test_python_interface.py . [ 25%] 398s calculator/socketio/test_socket_io_mpi_line.py . [ 25%] 398s calculator/test_al.py s [ 25%] 398s calculator/test_bond_polarizability.py ... [ 25%] 398s calculator/test_calculator.py .. [ 25%] 398s calculator/test_ch4_energy.py sssssssssss [ 25%] 398s calculator/test_command.py ............................................. [ 26%] 399s ............... [ 27%] 399s calculator/test_dftd3.py sssssssssssssss [ 27%] 399s calculator/test_eam.py . [ 27%] 399s calculator/test_eam_run.py sssssssss [ 27%] 399s calculator/test_fd.py ... [ 27%] 399s calculator/test_gulp.py s [ 27%] 399s calculator/test_gulp_opt.py s [ 28%] 399s calculator/test_h2.py sss [ 28%] 399s calculator/test_h2_bond_force.py sssssss [ 28%] 399s calculator/test_h2morse.py ..... [ 28%] 401s calculator/test_harmonic.py ...... [ 28%] 401s calculator/test_lj.py ....... [ 28%] 401s calculator/test_mopac.py ss [ 28%] 401s calculator/test_mopac_version.py ... [ 28%] 402s calculator/test_morse.py ..... [ 29%] 402s calculator/test_orca.py .sssssss [ 29%] 402s calculator/test_orca_qmmm.py s [ 29%] 402s calculator/test_polarizability.py . [ 29%] 402s calculator/test_si_stress.py sssss [ 29%] 404s calculator/test_subprocess_calculator.py ..s. [ 29%] 406s calculator/test_tersoff.py ...... [ 29%] 406s calculator/test_traj.py sssss.sss [ 29%] 406s calculator/test_ts09.py .. [ 30%] 406s calculator/turbomole/test_turbomole_2h2o.py s [ 30%] 406s calculator/turbomole/test_turbomole_H2.py ss [ 30%] 406s calculator/turbomole/test_turbomole_au13.py s [ 30%] 406s calculator/turbomole/test_turbomole_calculator.py .... [ 30%] 406s calculator/turbomole/test_turbomole_h2o.py ss [ 30%] 406s calculator/turbomole/test_turbomole_h3o2m.py s [ 30%] 406s calculator/turbomole/test_turbomole_optimizer.py ss [ 30%] 406s calculator/turbomole/test_turbomole_parameters.py ............. [ 30%] 406s calculator/turbomole/test_turbomole_qmmm.py s [ 30%] 406s calculator/turbomole/test_turbomole_reader.py . [ 30%] 406s calculator/turbomole/test_turbomole_statpt.py s [ 30%] 406s calculator/vasp/test_chgcar.py . [ 30%] 406s calculator/vasp/test_vasp_Al_volrelax.py s [ 30%] 406s calculator/vasp/test_vasp_calculator.py ...................... [ 31%] 406s calculator/vasp/test_vasp_charge.py ssssss [ 31%] 406s calculator/vasp/test_vasp_check_state.py s [ 31%] 406s calculator/vasp/test_vasp_co.py s [ 31%] 406s calculator/vasp/test_vasp_converge.py . [ 31%] 406s calculator/vasp/test_vasp_errors.py . [ 31%] 406s calculator/vasp/test_vasp_freq.py s [ 31%] 406s calculator/vasp/test_vasp_get_dos.py s [ 31%] 406s calculator/vasp/test_vasp_incar.py .......... [ 32%] 406s calculator/vasp/test_vasp_input.py ........................ [ 32%] 407s calculator/vasp/test_vasp_kpoints.py ....ss... [ 33%] 407s calculator/vasp/test_vasp_potcar.py ss [ 33%] 407s calculator/vasp/test_vasp_setup.py sssssss [ 33%] 407s calculator/vasp/test_vasp_wdir.py s [ 33%] 407s calculator/vasp/test_vasp_xml.py s [ 33%] 407s calculator/vasp/test_version.py . [ 33%] 407s cell/test_cell.py ........... [ 33%] 407s cell/test_cell_completion.py . [ 33%] 407s cell/test_cell_conv.py . [ 33%] 407s cell/test_cell_uncompletion.py .. 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[100%] 665s 665s =============================== warnings summary =============================== 665s :488 665s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 8 from C header, got 48 from PyObject 665s 665s calculator/turbomole/test_turbomole_optimizer.py::test_turbomole_optimizer 665s /usr/lib/python3.13/pathlib/_local.py:289: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 665s @property 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s db/test_db_web.py::test_paging 665s /usr/lib/python3.13/pathlib/_local.py:277: ResourceWarning: unclosed database in 665s @property 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s dft/test_bz.py::test_repeat_transpose_bz 665s /usr/lib/python3/dist-packages/matplotlib/cbook.py:266: ResourceWarning: unclosed database in 665s self._pickled_cids = set() 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s dft/test_bz.py::test_repeat_transpose_bz 665s /usr/lib/python3/dist-packages/matplotlib/cbook.py:266: ResourceWarning: unclosed database in 665s self._pickled_cids = set() 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed database in 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed database in 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed database in 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed database in 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed database in 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed database in 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] 665s /usr/lib/python3/dist-packages/ase/db/sqlite.py:524: ResourceWarning: unclosed database in 665s def _old2new(self, values): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s geometry/test_analysis.py::test_analysis 665s /usr/lib/python3/dist-packages/scipy/sparse/_coo.py:168: ResourceWarning: unclosed database in 665s if any(len(idx) != nnz for idx in self.coords): 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s md/test_rng.py::test_andersen[rng0] 665s /usr/lib/python3/dist-packages/ase/neighborlist.py:1020: ResourceWarning: unclosed file <_io.TextIOWrapper name='/dev/null' mode='w' encoding='utf-8'> 665s displacements2 = [[] for a in range(natoms)] 665s Enable tracemalloc to get traceback where the object was allocated. 665s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 665s 665s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 665s ==== 3056 passed, 553 skipped, 5 xfailed, 15 warnings in 293.74s (0:04:53) ===== 668s About to run pytest with these parameters: 668s -p 668s no:cacheprovider 669s ImportError while loading conftest '/usr/lib/python3/dist-packages/ase/test/conftest.py'. 670s conftest.py:15: in 670s from ase.test.factories import ( 670s factories.py:32: in 670s from ase.calculators.vasp import Vasp, get_vasp_version 670s ../calculators/vasp/__init__.py:4: in 670s from .vasp import Vasp 670s ../calculators/vasp/vasp.py:43: in 670s from ase.vibrations.data import VibrationsData 670s ../vibrations/__init__.py:1: in 670s from ase.vibrations.data import VibrationsData 670s ../vibrations/data.py:18: in 670s from ase.spectrum.doscollection import DOSCollection 670s ../spectrum/doscollection.py:18: in 670s from matplotlib.axes import Axes 670s ../../matplotlib/__init__.py:161: in 670s from . import _api, _version, cbook, _docstring, rcsetup 670s ../../matplotlib/rcsetup.py:29: in 670s from matplotlib._fontconfig_pattern import parse_fontconfig_pattern 670s ../../matplotlib/_fontconfig_pattern.py:15: in 670s from pyparsing import ( 670s ../../pyparsing/__init__.py:132: in 670s from .core import __diag__, __compat__ 670s E File "/usr/lib/python3/dist-packages/pyparsing/core.py", line 5637 670s E return f"{type(self).__name__}: {retString}" 670s E ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 670s E SyntaxError: 'return' in a 'finally' block 671s autopkgtest [20:42:47]: test command1: -----------------------] 675s autopkgtest [20:42:51]: test command1: - - - - - - - - - - results - - - - - - - - - - 675s command1 FAIL non-zero exit status 4 679s autopkgtest [20:42:55]: @@@@@@@@@@@@@@@@@@@@ summary 679s command1 FAIL non-zero exit status 4