0s autopkgtest [21:12:37]: starting date and time: 2025-10-18 21:12:37+0000 0s autopkgtest [21:12:37]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [21:12:37]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.coi2f5ju/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults --apt-upgrade lammps --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.13.7-2 -- lxd -r lxd-armhf-10.145.243.107 lxd-armhf-10.145.243.107:autopkgtest/ubuntu/resolute/armhf 21s autopkgtest [21:12:57]: testbed dpkg architecture: armhf 22s autopkgtest [21:12:59]: testbed apt version: 3.1.6ubuntu2 26s autopkgtest [21:13:03]: @@@@@@@@@@@@@@@@@@@@ test bed setup 28s autopkgtest [21:13:05]: testbed release detected to be: None 35s autopkgtest [21:13:12]: updating testbed package index (apt update) 37s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 37s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [83.3 kB] 37s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 37s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 37s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [18.2 kB] 37s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 37s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [431 kB] 37s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [54.3 kB] 38s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [89.6 kB] 38s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted armhf Packages [940 B] 38s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [307 kB] 38s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [3680 B] 38s Get:13 http://ftpmaster.internal/ubuntu resolute/main Sources [1408 kB] 38s Get:14 http://ftpmaster.internal/ubuntu resolute/restricted Sources [14.4 kB] 38s Get:15 http://ftpmaster.internal/ubuntu resolute/multiverse Sources [307 kB] 38s Get:16 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.1 MB] 38s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1357 kB] 38s Get:18 http://ftpmaster.internal/ubuntu resolute/restricted armhf Packages [1672 B] 38s Get:19 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [14.7 MB] 39s Get:20 http://ftpmaster.internal/ubuntu resolute/multiverse armhf Packages [182 kB] 42s Fetched 40.2 MB in 5s (7968 kB/s) 43s Reading package lists... 49s autopkgtest [21:13:26]: upgrading testbed (apt dist-upgrade and autopurge) 50s Reading package lists... 51s Building dependency tree... 51s Reading state information... 51s Calculating upgrade... 52s The following packages will be upgraded: 52s apparmor apt base-files binutils binutils-arm-linux-gnueabihf 52s binutils-common cloud-init cloud-init-base distro-info-data gcc-15-base 52s gir1.2-girepository-2.0 libapparmor1 libapt-pkg7.0 libatomic1 libbinutils 52s libctf-nobfd0 libctf0 libgcc-s1 libgirepository-1.0-1 libpython3-stdlib 52s libsframe2 libstdc++6 lto-disabled-list python3 python3-minimal sudo-rs 52s 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 52s Need to get 7366 kB of archives. 52s After this operation, 14.3 kB of additional disk space will be used. 52s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf base-files armhf 14ubuntu4 [75.4 kB] 53s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libatomic1 armhf 15.2.0-5ubuntu1 [7942 B] 53s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-15-base armhf 15.2.0-5ubuntu1 [58.1 kB] 53s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libgcc-s1 armhf 15.2.0-5ubuntu1 [40.6 kB] 53s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libstdc++6 armhf 15.2.0-5ubuntu1 [731 kB] 53s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libapt-pkg7.0 armhf 3.1.8ubuntu1 [1148 kB] 53s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf apt armhf 3.1.8ubuntu1 [1404 kB] 53s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-minimal armhf 3.13.7-2 [27.8 kB] 53s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3 armhf 3.13.7-2 [23.9 kB] 53s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libpython3-stdlib armhf 3.13.7-2 [10.6 kB] 53s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf distro-info-data all 0.67~ubuntu1 [7004 B] 53s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf libgirepository-1.0-1 armhf 1.86.0-6 [111 kB] 54s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf gir1.2-girepository-2.0 armhf 1.86.0-6 [25.3 kB] 54s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf libapparmor1 armhf 5.0.0~alpha1-0ubuntu8.1 [52.9 kB] 54s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf sudo-rs armhf 0.2.8-1ubuntu5.1 [548 kB] 54s Get:16 http://ftpmaster.internal/ubuntu resolute/main armhf apparmor armhf 5.0.0~alpha1-0ubuntu8.1 [631 kB] 54s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libctf0 armhf 2.45-7ubuntu2 [75.7 kB] 54s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libctf-nobfd0 armhf 2.45-7ubuntu2 [79.1 kB] 54s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-arm-linux-gnueabihf armhf 2.45-7ubuntu2 [1022 kB] 54s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libbinutils armhf 2.45-7ubuntu2 [411 kB] 54s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf binutils armhf 2.45-7ubuntu2 [3240 B] 54s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-common armhf 2.45-7ubuntu2 [220 kB] 54s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libsframe2 armhf 2.45-7ubuntu2 [13.4 kB] 54s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init-base all 25.3-0ubuntu1 [625 kB] 54s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init all 25.3-0ubuntu1 [2106 B] 54s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf lto-disabled-list all 71 [12.5 kB] 55s Preconfiguring packages ... 55s Fetched 7366 kB in 2s (4049 kB/s) 55s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 55s Preparing to unpack .../base-files_14ubuntu4_armhf.deb ... 55s Unpacking base-files (14ubuntu4) over (14ubuntu3) ... 55s Setting up base-files (14ubuntu4) ... 55s Installing new version of config file /etc/issue ... 55s Installing new version of config file /etc/issue.net ... 55s Installing new version of config file /etc/lsb-release ... 56s motd-news.service is a disabled or a static unit not running, not starting it. 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 56s Preparing to unpack .../libatomic1_15.2.0-5ubuntu1_armhf.deb ... 56s Unpacking libatomic1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 56s Preparing to unpack .../gcc-15-base_15.2.0-5ubuntu1_armhf.deb ... 56s Unpacking gcc-15-base:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 56s Setting up gcc-15-base:armhf (15.2.0-5ubuntu1) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 56s Preparing to unpack .../libgcc-s1_15.2.0-5ubuntu1_armhf.deb ... 56s Unpacking libgcc-s1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 56s Setting up libgcc-s1:armhf (15.2.0-5ubuntu1) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 56s Preparing to unpack .../libstdc++6_15.2.0-5ubuntu1_armhf.deb ... 56s Unpacking libstdc++6:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 56s Setting up libstdc++6:armhf (15.2.0-5ubuntu1) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 56s Preparing to unpack .../libapt-pkg7.0_3.1.8ubuntu1_armhf.deb ... 56s Unpacking libapt-pkg7.0:armhf (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 56s Setting up libapt-pkg7.0:armhf (3.1.8ubuntu1) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 56s Preparing to unpack .../apt_3.1.8ubuntu1_armhf.deb ... 56s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 57s Setting up apt (3.1.8ubuntu1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 57s Preparing to unpack .../python3-minimal_3.13.7-2_armhf.deb ... 57s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 57s Setting up python3-minimal (3.13.7-2) ... 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 58s Preparing to unpack .../00-python3_3.13.7-2_armhf.deb ... 58s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 58s Preparing to unpack .../01-libpython3-stdlib_3.13.7-2_armhf.deb ... 58s Unpacking libpython3-stdlib:armhf (3.13.7-2) over (3.13.7-1) ... 58s Preparing to unpack .../02-distro-info-data_0.67~ubuntu1_all.deb ... 58s Unpacking distro-info-data (0.67~ubuntu1) over (0.66) ... 58s Preparing to unpack .../03-libgirepository-1.0-1_1.86.0-6_armhf.deb ... 58s Unpacking libgirepository-1.0-1:armhf (1.86.0-6) over (1.84.0-1) ... 58s Preparing to unpack .../04-gir1.2-girepository-2.0_1.86.0-6_armhf.deb ... 58s Unpacking gir1.2-girepository-2.0:armhf (1.86.0-6) over (1.84.0-1) ... 58s Preparing to unpack .../05-libapparmor1_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 58s Unpacking libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 58s Preparing to unpack .../06-sudo-rs_0.2.8-1ubuntu5.1_armhf.deb ... 58s Unpacking sudo-rs (0.2.8-1ubuntu5.1) over (0.2.8-1ubuntu5) ... 58s Preparing to unpack .../07-apparmor_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 59s Unpacking apparmor (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 60s Preparing to unpack .../08-libctf0_2.45-7ubuntu2_armhf.deb ... 60s Unpacking libctf0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 60s Preparing to unpack .../09-libctf-nobfd0_2.45-7ubuntu2_armhf.deb ... 60s Unpacking libctf-nobfd0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 60s Preparing to unpack .../10-binutils-arm-linux-gnueabihf_2.45-7ubuntu2_armhf.deb ... 60s Unpacking binutils-arm-linux-gnueabihf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 60s Preparing to unpack .../11-libbinutils_2.45-7ubuntu2_armhf.deb ... 60s Unpacking libbinutils:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 60s Preparing to unpack .../12-binutils_2.45-7ubuntu2_armhf.deb ... 60s Unpacking binutils (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 60s Preparing to unpack .../13-binutils-common_2.45-7ubuntu2_armhf.deb ... 60s Unpacking binutils-common:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 60s Preparing to unpack .../14-libsframe2_2.45-7ubuntu2_armhf.deb ... 60s Unpacking libsframe2:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 60s Preparing to unpack .../15-cloud-init-base_25.3-0ubuntu1_all.deb ... 61s Unpacking cloud-init-base (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 61s Preparing to unpack .../16-cloud-init_25.3-0ubuntu1_all.deb ... 61s Unpacking cloud-init (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 61s Preparing to unpack .../17-lto-disabled-list_71_all.deb ... 61s Unpacking lto-disabled-list (71) over (69) ... 61s Setting up lto-disabled-list (71) ... 61s Setting up libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) ... 61s Setting up distro-info-data (0.67~ubuntu1) ... 61s Setting up libsframe2:armhf (2.45-7ubuntu2) ... 61s Setting up binutils-common:armhf (2.45-7ubuntu2) ... 61s Setting up libctf-nobfd0:armhf (2.45-7ubuntu2) ... 61s Setting up apparmor (5.0.0~alpha1-0ubuntu8.1) ... 61s Installing new version of config file /etc/apparmor.d/fusermount3 ... 61s apparmor_parser: Unable to replace "lsb_release". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 61s 61s apparmor_parser: Unable to replace "kmod". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 61s 61s apparmor_parser: Unable to replace "nvidia_modprobe". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 61s 63s Reloading AppArmor profiles 63s /sbin/apparmor_parser: Unable to replace "1password". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "Discord". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "MongoDB Compass". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "balena-etcher". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "buildah". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "brave". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "cam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ch-checkns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ch-run". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "bwrap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "chrome". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "vscode". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "chromium". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "crun". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "bfdd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "babeld". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "devhelp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "alsamixer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "element-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "bgpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "evolution". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "epiphany". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "firefox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "flatpak". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "geary". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "foliate". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "github-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "goldendict". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "eigrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "dnstracer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "fabricd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "iotop-c". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "hostname". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "dig". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "fusermount3". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "isisd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "kchmviewer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "keybase". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lc-compliance". /sbin/apparmor_parser: Unable to replace "Xorg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "libcamerify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ipa_verify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "linux-sandbox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "loupe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "gs". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "john". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-attach". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ldpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-destroy". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-create". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-execute". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lsusb". /sbin/apparmor_parser: Unable to replace "lxc-stop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-unshare". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-usernsexec". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lsblk". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "mmdebstrap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "irssi". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "msedge". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "notepadqq". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "mosquitto". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "mbsync". /sbin/apparmor_parser: Unable to replace "compressor". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "locale". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "linux-boot-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lsb_release". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "opam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "obsidian". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "opera". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "notify-send". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nslookup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nc.openbsd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nhrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pageedit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "kmod". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nvidia_modprobe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ospfd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pimd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pbrd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "podman". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "polypane". /sbin/apparmor_parser: Unable to replace "privacybrowser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "os-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ospf6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "qcam". /sbin/apparmor_parser: Unable to replace "qmapshack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "plasmashell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pathd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pim6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "qutebrowser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "rootlesskit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "rpm". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "runc". /sbin/apparmor_parser: Unable to replace "rssguard". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "qpdf". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-abort". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-adduser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ripngd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ripd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-checkpackages". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-apt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-createchroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-clean". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-distupgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-hold". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-shell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-destroychroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-unhold". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "scide". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-update". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "openvpn". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-upgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "signal-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "slack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "slirp4netns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "steam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "stress-ng". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "surfshark". /sbin/apparmor_parser: Unable to replace "systemd-coredump". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "thunderbird". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ssh-keyscan". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "trinity". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "systemd-detect-virt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tinyproxy". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "staticd". /sbin/apparmor_parser: Unable to replace "tup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tuxedo-control-center". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "proftpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "unprivileged_userns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "userbindmount". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "mx-extract". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "rygel". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "unix-chkpwd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_apt_news". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "cmds". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tnftp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "uwsgi-core". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "vdens". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "/usr/bin/man". /sbin/apparmor_parser: Unable to replace "virtiofsd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "vivaldi-bin". /sbin/apparmor_parser: Unable to replace "/usr/sbin/chronyd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "vpnns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "vrrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "dumpcap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tshark". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "wike". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "wg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "wpcom". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "rsyslogd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "who". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tcpdump". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "wg-quick". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "znc". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "apt_methods". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_esm_cache". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "transmission-cli". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s Error: At least one profile failed to load 63s Setting up libatomic1:armhf (15.2.0-5ubuntu1) ... 63s Setting up libgirepository-1.0-1:armhf (1.86.0-6) ... 63s Setting up libbinutils:armhf (2.45-7ubuntu2) ... 63s Setting up sudo-rs (0.2.8-1ubuntu5.1) ... 63s Setting up libpython3-stdlib:armhf (3.13.7-2) ... 63s Setting up libctf0:armhf (2.45-7ubuntu2) ... 63s Setting up python3 (3.13.7-2) ... 63s Setting up cloud-init-base (25.3-0ubuntu1) ... 65s Setting up gir1.2-girepository-2.0:armhf (1.86.0-6) ... 65s Setting up binutils-arm-linux-gnueabihf (2.45-7ubuntu2) ... 65s Setting up cloud-init (25.3-0ubuntu1) ... 65s Setting up binutils (2.45-7ubuntu2) ... 65s Processing triggers for plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu1) ... 65s Processing triggers for procps (2:4.0.4-8ubuntu3) ... 65s Processing triggers for install-info (7.1.1-1ubuntu1) ... 66s Processing triggers for libc-bin (2.42-0ubuntu3) ... 66s Processing triggers for rsyslog (8.2504.0-1ubuntu2) ... 66s Processing triggers for systemd (257.9-0ubuntu2) ... 66s Processing triggers for man-db (2.13.1-1) ... 70s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s Solving dependencies... 72s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 74s autopkgtest [21:13:51]: rebooting testbed after setup commands that affected boot 114s autopkgtest [21:14:31]: testbed running kernel: Linux 6.8.0-58-generic #60~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Fri Mar 28 14:48:37 UTC 2 137s autopkgtest [21:14:54]: @@@@@@@@@@@@@@@@@@@@ apt-source lammps 177s Get:1 http://ftpmaster.internal/ubuntu resolute/universe lammps 20250204+dfsg.1-2 (dsc) [3212 B] 177s Get:2 http://ftpmaster.internal/ubuntu resolute/universe lammps 20250204+dfsg.1-2 (tar) [132 MB] 177s Get:3 http://ftpmaster.internal/ubuntu resolute/universe lammps 20250204+dfsg.1-2 (diff) [17.3 kB] 178s gpgv: Signature made Mon Mar 3 06:11:14 2025 UTC 178s gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 178s gpgv: Can't check signature: No public key 178s dpkg-source: warning: cannot verify inline signature for ./lammps_20250204+dfsg.1-2.dsc: no acceptable signature found 182s autopkgtest [21:15:39]: testing package lammps version 20250204+dfsg.1-2 184s autopkgtest [21:15:41]: build not needed 198s autopkgtest [21:15:55]: test crack: preparing testbed 200s Reading package lists... 200s Building dependency tree... 200s Reading state information... 201s Solving dependencies... 201s The following NEW packages will be installed: 201s fontconfig-config fonts-dejavu-core fonts-dejavu-mono hwloc-nox lammps 201s lammps-data libaec0 libblas3 libcairo2 libcurl3t64-gnutls libdeflate0 201s libdouble-conversion3 libdrm-amdgpu1 libfftw3-double3 libfontconfig1 201s libfreetype6 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 201s libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-310 201s libhdf5-hl-310 libhwloc15 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp26 201s libkim-api2 liblammps0t64 liblapack3 liblerc4 libllvm20 libmpich12 201s libnetcdf22 libogg0 libopengl0 libpixman-1-0 libproj25 libpython3.13 201s libsharpyuv0 libslurm42t64 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 201s libtcl8.6 libtheoradec1 libtheoraenc1 libtiff6 libtk8.6 libvoro++1 libvtk9.3 201s libvulkan1 libwebp7 libx11-xcb1 libxcb-dri3-0 libxcb-glx0 libxcb-present0 201s libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxft2 201s libxrender1 libxshmfence1 libxss1 libxxf86vm1 mesa-libgallium 201s mpi-default-bin mpich proj-data x11-common 202s 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. 202s Need to get 105 MB of archives. 202s After this operation, 410 MB of additional disk space will be used. 202s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 202s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 202s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf fontconfig-config armhf 2.15.0-2.3ubuntu1 [38.1 kB] 202s Get:4 http://ftpmaster.internal/ubuntu resolute/universe armhf lammps-data all 20250204+dfsg.1-2 [10.2 MB] 205s Get:5 http://ftpmaster.internal/ubuntu resolute/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 205s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libblas3 armhf 3.12.1-6build1 [133 kB] 205s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf libfreetype6 armhf 2.13.3+dfsg-1build1 [334 kB] 205s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf libfontconfig1 armhf 2.15.0-2.3ubuntu1 [114 kB] 205s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 205s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-render0 armhf 1.17.0-2build1 [15.5 kB] 205s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-shm0 armhf 1.17.0-2build1 [5962 B] 205s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf libxrender1 armhf 1:0.9.12-1 [16.6 kB] 205s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf libcairo2 armhf 1.18.4-1build1 [489 kB] 205s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf libcurl3t64-gnutls armhf 8.14.1-2ubuntu1 [352 kB] 205s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate0 armhf 1.23-2 [38.7 kB] 205s Get:16 http://ftpmaster.internal/ubuntu resolute/universe armhf libdouble-conversion3 armhf 3.3.1-1build1 [39.3 kB] 205s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libdrm-amdgpu1 armhf 2.4.125-1 [19.5 kB] 205s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libgomp1 armhf 15.2.0-5ubuntu1 [129 kB] 205s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf libfftw3-double3 armhf 3.3.10-2fakesync1build2 [368 kB] 205s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libllvm20 armhf 1:20.1.8-0ubuntu4 [29.5 MB] 206s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf libx11-xcb1 armhf 2:1.8.12-1build1 [7920 B] 206s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-dri3-0 armhf 1.17.0-2build1 [7350 B] 206s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-present0 armhf 1.17.0-2build1 [6094 B] 206s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-randr0 armhf 1.17.0-2build1 [16.9 kB] 206s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-sync1 armhf 1.17.0-2build1 [8852 B] 206s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-xfixes0 armhf 1.17.0-2build1 [10.2 kB] 206s Get:27 http://ftpmaster.internal/ubuntu resolute/main armhf libxshmfence1 armhf 1.3.3-1 [4948 B] 206s Get:28 http://ftpmaster.internal/ubuntu resolute/main armhf mesa-libgallium armhf 25.2.3-1ubuntu1 [8778 kB] 207s Get:29 http://ftpmaster.internal/ubuntu resolute/main armhf libgbm1 armhf 25.2.3-1ubuntu1 [30.0 kB] 207s Get:30 http://ftpmaster.internal/ubuntu resolute/main armhf libgfortran5 armhf 15.2.0-5ubuntu1 [334 kB] 207s Get:31 http://ftpmaster.internal/ubuntu resolute/main armhf libvulkan1 armhf 1.4.321.0-1 [130 kB] 207s Get:32 http://ftpmaster.internal/ubuntu resolute/main armhf libgl1-mesa-dri armhf 25.2.3-1ubuntu1 [32.3 kB] 207s Get:33 http://ftpmaster.internal/ubuntu resolute/main armhf libglvnd0 armhf 1.7.0-1build2 [64.7 kB] 207s Get:34 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-glx0 armhf 1.17.0-2build1 [22.8 kB] 207s Get:35 http://ftpmaster.internal/ubuntu resolute/main armhf libxxf86vm1 armhf 1:1.1.4-1build4 [8068 B] 207s Get:36 http://ftpmaster.internal/ubuntu resolute/main armhf libglx-mesa0 armhf 25.2.3-1ubuntu1 [87.2 kB] 207s Get:37 http://ftpmaster.internal/ubuntu resolute/main armhf libglx0 armhf 1.7.0-1build2 [37.9 kB] 207s Get:38 http://ftpmaster.internal/ubuntu resolute/main armhf libgl1 armhf 1.7.0-1build2 [103 kB] 207s Get:39 http://ftpmaster.internal/ubuntu resolute/universe armhf libgl2ps1.4 armhf 1.4.2+dfsg1-2build1 [37.7 kB] 207s Get:40 http://ftpmaster.internal/ubuntu resolute/universe armhf libglew2.2 armhf 2.2.0-4build1 [197 kB] 207s Get:41 http://ftpmaster.internal/ubuntu resolute/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 207s Get:42 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-310 armhf 1.14.5+repack-3build1 [1411 kB] 207s Get:43 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-3build1 [58.9 kB] 207s Get:44 http://ftpmaster.internal/ubuntu resolute/universe armhf libhwloc15 armhf 2.12.2-1 [149 kB] 207s Get:45 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg-turbo8 armhf 2.1.5-4ubuntu2 [127 kB] 207s Get:46 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 207s Get:47 http://ftpmaster.internal/ubuntu resolute/main armhf libjsoncpp26 armhf 1.9.6-3 [75.5 kB] 207s Get:48 http://ftpmaster.internal/ubuntu resolute/universe armhf libkim-api2 armhf 2.3.0-1ubuntu1 [566 kB] 207s Get:49 http://ftpmaster.internal/ubuntu resolute/main armhf liblapack3 armhf 3.12.1-6build1 [2091 kB] 207s Get:50 http://ftpmaster.internal/ubuntu resolute/universe armhf libmpich12 armhf 4.3.0+really4.2.1-1build1 [1688 kB] 207s Get:51 http://ftpmaster.internal/ubuntu resolute/universe armhf libnetcdf22 armhf 1:4.9.3-1build1 [511 kB] 207s Get:52 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.13 armhf 3.13.7-1 [2123 kB] 207s Get:53 http://ftpmaster.internal/ubuntu resolute/universe armhf libvoro++1 armhf 0.5+revert-to-0.4.6+dfsg1-1 [94.8 kB] 207s Get:54 http://ftpmaster.internal/ubuntu resolute/main armhf libogg0 armhf 1.3.5-3build1 [20.5 kB] 207s Get:55 http://ftpmaster.internal/ubuntu resolute/main armhf libopengl0 armhf 1.7.0-1build2 [36.0 kB] 207s Get:56 http://ftpmaster.internal/ubuntu resolute/universe armhf proj-data all 9.6.0-1 [7955 kB] 208s Get:57 http://ftpmaster.internal/ubuntu resolute/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 208s Get:58 http://ftpmaster.internal/ubuntu resolute/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 208s Get:59 http://ftpmaster.internal/ubuntu resolute/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 208s Get:60 http://ftpmaster.internal/ubuntu resolute/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 208s Get:61 http://ftpmaster.internal/ubuntu resolute/main armhf libtiff6 armhf 4.7.0-3ubuntu3 [188 kB] 208s Get:62 http://ftpmaster.internal/ubuntu resolute/universe armhf libproj25 armhf 9.6.0-1 [1345 kB] 208s Get:63 http://ftpmaster.internal/ubuntu resolute/universe armhf libtbbbind-2-5 armhf 2022.1.0-1 [13.2 kB] 208s Get:64 http://ftpmaster.internal/ubuntu resolute/universe armhf libtbbmalloc2 armhf 2022.1.0-1 [47.4 kB] 208s Get:65 http://ftpmaster.internal/ubuntu resolute/universe armhf libtbb12 armhf 2022.1.0-1 [81.5 kB] 208s Get:66 http://ftpmaster.internal/ubuntu resolute/main armhf libtcl8.6 armhf 8.6.17+dfsg-1 [918 kB] 208s Get:67 http://ftpmaster.internal/ubuntu resolute/main armhf libtheoradec1 armhf 1.2.0~alpha1+dfsg-6 [45.8 kB] 208s Get:68 http://ftpmaster.internal/ubuntu resolute/main armhf libtheoraenc1 armhf 1.2.0~alpha1+dfsg-6 [91.8 kB] 208s Get:69 http://ftpmaster.internal/ubuntu resolute/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 208s Get:70 http://ftpmaster.internal/ubuntu resolute/main armhf x11-common all 1:7.7+24ubuntu1 [22.4 kB] 208s Get:71 http://ftpmaster.internal/ubuntu resolute/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 208s Get:72 http://ftpmaster.internal/ubuntu resolute/main armhf libtk8.6 armhf 8.6.17-1 [694 kB] 208s Get:73 http://ftpmaster.internal/ubuntu resolute/universe armhf libvtk9.3 armhf 9.3.0+dfsg1-4ubuntu2 [21.9 MB] 209s Get:74 http://ftpmaster.internal/ubuntu resolute/universe armhf liblammps0t64 armhf 20250204+dfsg.1-2 [7282 kB] 209s Get:75 http://ftpmaster.internal/ubuntu resolute/universe armhf libslurm42t64 armhf 24.11.5-4 [771 kB] 209s Get:76 http://ftpmaster.internal/ubuntu resolute/universe armhf hwloc-nox armhf 2.12.2-1 [215 kB] 209s Get:77 http://ftpmaster.internal/ubuntu resolute/universe armhf mpich armhf 4.3.0+really4.2.1-1build1 [239 kB] 209s Get:78 http://ftpmaster.internal/ubuntu resolute/universe armhf mpi-default-bin armhf 1.18 [2504 B] 209s Get:79 http://ftpmaster.internal/ubuntu resolute/universe armhf lammps armhf 20250204+dfsg.1-2 [14.9 kB] 210s Fetched 105 MB in 8s (13.8 MB/s) 210s Selecting previously unselected package fonts-dejavu-mono. 210s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 210s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 210s Unpacking fonts-dejavu-mono (2.37-8) ... 210s Selecting previously unselected package fonts-dejavu-core. 210s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 210s Unpacking fonts-dejavu-core (2.37-8) ... 210s Selecting previously unselected package fontconfig-config. 210s Preparing to unpack .../02-fontconfig-config_2.15.0-2.3ubuntu1_armhf.deb ... 210s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 210s Selecting previously unselected package lammps-data. 210s Preparing to unpack .../03-lammps-data_20250204+dfsg.1-2_all.deb ... 210s Unpacking lammps-data (20250204+dfsg.1-2) ... 211s Selecting previously unselected package libaec0:armhf. 211s Preparing to unpack .../04-libaec0_1.1.3-1_armhf.deb ... 211s Unpacking libaec0:armhf (1.1.3-1) ... 211s Selecting previously unselected package libblas3:armhf. 211s Preparing to unpack .../05-libblas3_3.12.1-6build1_armhf.deb ... 211s Unpacking libblas3:armhf (3.12.1-6build1) ... 211s Selecting previously unselected package libfreetype6:armhf. 211s Preparing to unpack .../06-libfreetype6_2.13.3+dfsg-1build1_armhf.deb ... 211s Unpacking libfreetype6:armhf (2.13.3+dfsg-1build1) ... 211s Selecting previously unselected package libfontconfig1:armhf. 211s Preparing to unpack .../07-libfontconfig1_2.15.0-2.3ubuntu1_armhf.deb ... 211s Unpacking libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 211s Selecting previously unselected package libpixman-1-0:armhf. 211s Preparing to unpack .../08-libpixman-1-0_0.44.0-3_armhf.deb ... 211s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 211s Selecting previously unselected package libxcb-render0:armhf. 211s Preparing to unpack .../09-libxcb-render0_1.17.0-2build1_armhf.deb ... 211s Unpacking libxcb-render0:armhf (1.17.0-2build1) ... 211s Selecting previously unselected package libxcb-shm0:armhf. 211s Preparing to unpack .../10-libxcb-shm0_1.17.0-2build1_armhf.deb ... 211s Unpacking libxcb-shm0:armhf (1.17.0-2build1) ... 211s Selecting previously unselected package libxrender1:armhf. 211s Preparing to unpack .../11-libxrender1_1%3a0.9.12-1_armhf.deb ... 211s Unpacking libxrender1:armhf (1:0.9.12-1) ... 211s Selecting previously unselected package libcairo2:armhf. 211s Preparing to unpack .../12-libcairo2_1.18.4-1build1_armhf.deb ... 211s Unpacking libcairo2:armhf (1.18.4-1build1) ... 211s Selecting previously unselected package libcurl3t64-gnutls:armhf. 211s Preparing to unpack .../13-libcurl3t64-gnutls_8.14.1-2ubuntu1_armhf.deb ... 211s Unpacking libcurl3t64-gnutls:armhf (8.14.1-2ubuntu1) ... 211s Selecting previously unselected package libdeflate0:armhf. 211s Preparing to unpack .../14-libdeflate0_1.23-2_armhf.deb ... 211s Unpacking libdeflate0:armhf (1.23-2) ... 211s Selecting previously unselected package libdouble-conversion3:armhf. 211s Preparing to unpack .../15-libdouble-conversion3_3.3.1-1build1_armhf.deb ... 211s Unpacking libdouble-conversion3:armhf (3.3.1-1build1) ... 211s Selecting previously unselected package libdrm-amdgpu1:armhf. 211s Preparing to unpack .../16-libdrm-amdgpu1_2.4.125-1_armhf.deb ... 211s Unpacking libdrm-amdgpu1:armhf (2.4.125-1) ... 211s Selecting previously unselected package libgomp1:armhf. 211s Preparing to unpack .../17-libgomp1_15.2.0-5ubuntu1_armhf.deb ... 211s Unpacking libgomp1:armhf (15.2.0-5ubuntu1) ... 211s Selecting previously unselected package libfftw3-double3:armhf. 211s Preparing to unpack .../18-libfftw3-double3_3.3.10-2fakesync1build2_armhf.deb ... 211s Unpacking libfftw3-double3:armhf (3.3.10-2fakesync1build2) ... 211s Selecting previously unselected package libllvm20:armhf. 211s Preparing to unpack .../19-libllvm20_1%3a20.1.8-0ubuntu4_armhf.deb ... 211s Unpacking libllvm20:armhf (1:20.1.8-0ubuntu4) ... 212s Selecting previously unselected package libx11-xcb1:armhf. 212s Preparing to unpack .../20-libx11-xcb1_2%3a1.8.12-1build1_armhf.deb ... 212s Unpacking libx11-xcb1:armhf (2:1.8.12-1build1) ... 212s Selecting previously unselected package libxcb-dri3-0:armhf. 212s Preparing to unpack .../21-libxcb-dri3-0_1.17.0-2build1_armhf.deb ... 212s Unpacking libxcb-dri3-0:armhf (1.17.0-2build1) ... 212s Selecting previously unselected package libxcb-present0:armhf. 212s Preparing to unpack .../22-libxcb-present0_1.17.0-2build1_armhf.deb ... 212s Unpacking libxcb-present0:armhf (1.17.0-2build1) ... 212s Selecting previously unselected package libxcb-randr0:armhf. 212s Preparing to unpack .../23-libxcb-randr0_1.17.0-2build1_armhf.deb ... 212s Unpacking libxcb-randr0:armhf (1.17.0-2build1) ... 212s Selecting previously unselected package libxcb-sync1:armhf. 212s Preparing to unpack .../24-libxcb-sync1_1.17.0-2build1_armhf.deb ... 212s Unpacking libxcb-sync1:armhf (1.17.0-2build1) ... 213s Selecting previously unselected package libxcb-xfixes0:armhf. 213s Preparing to unpack .../25-libxcb-xfixes0_1.17.0-2build1_armhf.deb ... 213s Unpacking libxcb-xfixes0:armhf (1.17.0-2build1) ... 213s Selecting previously unselected package libxshmfence1:armhf. 213s Preparing to unpack .../26-libxshmfence1_1.3.3-1_armhf.deb ... 213s Unpacking libxshmfence1:armhf (1.3.3-1) ... 213s Selecting previously unselected package mesa-libgallium:armhf. 213s Preparing to unpack .../27-mesa-libgallium_25.2.3-1ubuntu1_armhf.deb ... 213s Unpacking mesa-libgallium:armhf (25.2.3-1ubuntu1) ... 213s Selecting previously unselected package libgbm1:armhf. 213s Preparing to unpack .../28-libgbm1_25.2.3-1ubuntu1_armhf.deb ... 213s Unpacking libgbm1:armhf (25.2.3-1ubuntu1) ... 213s Selecting previously unselected package libgfortran5:armhf. 213s Preparing to unpack .../29-libgfortran5_15.2.0-5ubuntu1_armhf.deb ... 213s Unpacking libgfortran5:armhf (15.2.0-5ubuntu1) ... 213s Selecting previously unselected package libvulkan1:armhf. 213s Preparing to unpack .../30-libvulkan1_1.4.321.0-1_armhf.deb ... 213s Unpacking libvulkan1:armhf (1.4.321.0-1) ... 213s Selecting previously unselected package libgl1-mesa-dri:armhf. 213s Preparing to unpack .../31-libgl1-mesa-dri_25.2.3-1ubuntu1_armhf.deb ... 213s Unpacking libgl1-mesa-dri:armhf (25.2.3-1ubuntu1) ... 213s Selecting previously unselected package libglvnd0:armhf. 213s Preparing to unpack .../32-libglvnd0_1.7.0-1build2_armhf.deb ... 213s Unpacking libglvnd0:armhf (1.7.0-1build2) ... 213s Selecting previously unselected package libxcb-glx0:armhf. 213s Preparing to unpack .../33-libxcb-glx0_1.17.0-2build1_armhf.deb ... 213s Unpacking libxcb-glx0:armhf (1.17.0-2build1) ... 213s Selecting previously unselected package libxxf86vm1:armhf. 213s Preparing to unpack .../34-libxxf86vm1_1%3a1.1.4-1build4_armhf.deb ... 213s Unpacking libxxf86vm1:armhf (1:1.1.4-1build4) ... 213s Selecting previously unselected package libglx-mesa0:armhf. 213s Preparing to unpack .../35-libglx-mesa0_25.2.3-1ubuntu1_armhf.deb ... 213s Unpacking libglx-mesa0:armhf (25.2.3-1ubuntu1) ... 213s Selecting previously unselected package libglx0:armhf. 213s Preparing to unpack .../36-libglx0_1.7.0-1build2_armhf.deb ... 213s Unpacking libglx0:armhf (1.7.0-1build2) ... 213s Selecting previously unselected package libgl1:armhf. 213s Preparing to unpack .../37-libgl1_1.7.0-1build2_armhf.deb ... 213s Unpacking libgl1:armhf (1.7.0-1build2) ... 213s Selecting previously unselected package libgl2ps1.4. 213s Preparing to unpack .../38-libgl2ps1.4_1.4.2+dfsg1-2build1_armhf.deb ... 213s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 213s Selecting previously unselected package libglew2.2:armhf. 213s Preparing to unpack .../39-libglew2.2_2.2.0-4build1_armhf.deb ... 213s Unpacking libglew2.2:armhf (2.2.0-4build1) ... 213s Selecting previously unselected package libsz2:armhf. 213s Preparing to unpack .../40-libsz2_1.1.3-1_armhf.deb ... 213s Unpacking libsz2:armhf (1.1.3-1) ... 213s Selecting previously unselected package libhdf5-310:armhf. 213s Preparing to unpack .../41-libhdf5-310_1.14.5+repack-3build1_armhf.deb ... 213s Unpacking libhdf5-310:armhf (1.14.5+repack-3build1) ... 213s Selecting previously unselected package libhdf5-hl-310:armhf. 213s Preparing to unpack .../42-libhdf5-hl-310_1.14.5+repack-3build1_armhf.deb ... 213s Unpacking libhdf5-hl-310:armhf (1.14.5+repack-3build1) ... 213s Selecting previously unselected package libhwloc15:armhf. 213s Preparing to unpack .../43-libhwloc15_2.12.2-1_armhf.deb ... 213s Unpacking libhwloc15:armhf (2.12.2-1) ... 214s Selecting previously unselected package libjpeg-turbo8:armhf. 214s Preparing to unpack .../44-libjpeg-turbo8_2.1.5-4ubuntu2_armhf.deb ... 214s Unpacking libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 214s Selecting previously unselected package libjpeg8:armhf. 214s Preparing to unpack .../45-libjpeg8_8c-2ubuntu11_armhf.deb ... 214s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 214s Selecting previously unselected package libjsoncpp26:armhf. 214s Preparing to unpack .../46-libjsoncpp26_1.9.6-3_armhf.deb ... 214s Unpacking libjsoncpp26:armhf (1.9.6-3) ... 214s Selecting previously unselected package libkim-api2:armhf. 214s Preparing to unpack .../47-libkim-api2_2.3.0-1ubuntu1_armhf.deb ... 214s Unpacking libkim-api2:armhf (2.3.0-1ubuntu1) ... 214s Selecting previously unselected package liblapack3:armhf. 214s Preparing to unpack .../48-liblapack3_3.12.1-6build1_armhf.deb ... 214s Unpacking liblapack3:armhf (3.12.1-6build1) ... 214s Selecting previously unselected package libmpich12:armhf. 214s Preparing to unpack .../49-libmpich12_4.3.0+really4.2.1-1build1_armhf.deb ... 214s Unpacking libmpich12:armhf (4.3.0+really4.2.1-1build1) ... 214s Selecting previously unselected package libnetcdf22:armhf. 214s Preparing to unpack .../50-libnetcdf22_1%3a4.9.3-1build1_armhf.deb ... 214s Unpacking libnetcdf22:armhf (1:4.9.3-1build1) ... 214s Selecting previously unselected package libpython3.13:armhf. 214s Preparing to unpack .../51-libpython3.13_3.13.7-1_armhf.deb ... 214s Unpacking libpython3.13:armhf (3.13.7-1) ... 214s Selecting previously unselected package libvoro++1. 214s Preparing to unpack .../52-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_armhf.deb ... 214s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 214s Selecting previously unselected package libogg0:armhf. 214s Preparing to unpack .../53-libogg0_1.3.5-3build1_armhf.deb ... 214s Unpacking libogg0:armhf (1.3.5-3build1) ... 214s Selecting previously unselected package libopengl0:armhf. 214s Preparing to unpack .../54-libopengl0_1.7.0-1build2_armhf.deb ... 214s Unpacking libopengl0:armhf (1.7.0-1build2) ... 214s Selecting previously unselected package proj-data. 214s Preparing to unpack .../55-proj-data_9.6.0-1_all.deb ... 214s Unpacking proj-data (9.6.0-1) ... 214s Selecting previously unselected package libjbig0:armhf. 214s Preparing to unpack .../56-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 214s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 214s Selecting previously unselected package liblerc4:armhf. 214s Preparing to unpack .../57-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 214s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 214s Selecting previously unselected package libsharpyuv0:armhf. 215s Preparing to unpack .../58-libsharpyuv0_1.5.0-0.1_armhf.deb ... 215s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 215s Selecting previously unselected package libwebp7:armhf. 215s Preparing to unpack .../59-libwebp7_1.5.0-0.1_armhf.deb ... 215s Unpacking libwebp7:armhf (1.5.0-0.1) ... 215s Selecting previously unselected package libtiff6:armhf. 215s Preparing to unpack .../60-libtiff6_4.7.0-3ubuntu3_armhf.deb ... 215s Unpacking libtiff6:armhf (4.7.0-3ubuntu3) ... 215s Selecting previously unselected package libproj25:armhf. 215s Preparing to unpack .../61-libproj25_9.6.0-1_armhf.deb ... 215s Unpacking libproj25:armhf (9.6.0-1) ... 215s Selecting previously unselected package libtbbbind-2-5:armhf. 215s Preparing to unpack .../62-libtbbbind-2-5_2022.1.0-1_armhf.deb ... 215s Unpacking libtbbbind-2-5:armhf (2022.1.0-1) ... 215s Selecting previously unselected package libtbbmalloc2:armhf. 215s Preparing to unpack .../63-libtbbmalloc2_2022.1.0-1_armhf.deb ... 215s Unpacking libtbbmalloc2:armhf (2022.1.0-1) ... 215s Selecting previously unselected package libtbb12:armhf. 215s Preparing to unpack .../64-libtbb12_2022.1.0-1_armhf.deb ... 215s Unpacking libtbb12:armhf (2022.1.0-1) ... 215s Selecting previously unselected package libtcl8.6:armhf. 215s Preparing to unpack .../65-libtcl8.6_8.6.17+dfsg-1_armhf.deb ... 215s Unpacking libtcl8.6:armhf (8.6.17+dfsg-1) ... 215s Selecting previously unselected package libtheoradec1:armhf. 215s Preparing to unpack .../66-libtheoradec1_1.2.0~alpha1+dfsg-6_armhf.deb ... 215s Unpacking libtheoradec1:armhf (1.2.0~alpha1+dfsg-6) ... 215s Selecting previously unselected package libtheoraenc1:armhf. 215s Preparing to unpack .../67-libtheoraenc1_1.2.0~alpha1+dfsg-6_armhf.deb ... 215s Unpacking libtheoraenc1:armhf (1.2.0~alpha1+dfsg-6) ... 215s Selecting previously unselected package libxft2:armhf. 215s Preparing to unpack .../68-libxft2_2.3.6-1build1_armhf.deb ... 215s Unpacking libxft2:armhf (2.3.6-1build1) ... 215s Selecting previously unselected package x11-common. 215s Preparing to unpack .../69-x11-common_1%3a7.7+24ubuntu1_all.deb ... 215s Unpacking x11-common (1:7.7+24ubuntu1) ... 215s Selecting previously unselected package libxss1:armhf. 215s Preparing to unpack .../70-libxss1_1%3a1.2.3-1build3_armhf.deb ... 215s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 215s Selecting previously unselected package libtk8.6:armhf. 215s Preparing to unpack .../71-libtk8.6_8.6.17-1_armhf.deb ... 215s Unpacking libtk8.6:armhf (8.6.17-1) ... 215s Selecting previously unselected package libvtk9.3:armhf. 215s Preparing to unpack .../72-libvtk9.3_9.3.0+dfsg1-4ubuntu2_armhf.deb ... 215s Unpacking libvtk9.3:armhf (9.3.0+dfsg1-4ubuntu2) ... 216s Selecting previously unselected package liblammps0t64:armhf. 216s Preparing to unpack .../73-liblammps0t64_20250204+dfsg.1-2_armhf.deb ... 216s Unpacking liblammps0t64:armhf (20250204+dfsg.1-2) ... 216s Selecting previously unselected package libslurm42t64. 216s Preparing to unpack .../74-libslurm42t64_24.11.5-4_armhf.deb ... 216s Unpacking libslurm42t64 (24.11.5-4) ... 216s Selecting previously unselected package hwloc-nox. 216s Preparing to unpack .../75-hwloc-nox_2.12.2-1_armhf.deb ... 216s Unpacking hwloc-nox (2.12.2-1) ... 216s Selecting previously unselected package mpich. 216s Preparing to unpack .../76-mpich_4.3.0+really4.2.1-1build1_armhf.deb ... 216s Unpacking mpich (4.3.0+really4.2.1-1build1) ... 216s Selecting previously unselected package mpi-default-bin. 216s Preparing to unpack .../77-mpi-default-bin_1.18_armhf.deb ... 216s Unpacking mpi-default-bin (1.18) ... 216s Selecting previously unselected package lammps. 216s Preparing to unpack .../78-lammps_20250204+dfsg.1-2_armhf.deb ... 216s Unpacking lammps (20250204+dfsg.1-2) ... 217s Setting up libpython3.13:armhf (3.13.7-1) ... 217s Setting up libxcb-dri3-0:armhf (1.17.0-2build1) ... 217s Setting up libtbbmalloc2:armhf (2022.1.0-1) ... 217s Setting up libpixman-1-0:armhf (0.44.0-3) ... 217s Setting up libsharpyuv0:armhf (1.5.0-0.1) ... 217s Setting up libx11-xcb1:armhf (2:1.8.12-1build1) ... 217s Setting up libdouble-conversion3:armhf (3.3.1-1build1) ... 217s Setting up libxcb-xfixes0:armhf (1.17.0-2build1) ... 217s Setting up libogg0:armhf (1.3.5-3build1) ... 217s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 217s Setting up proj-data (9.6.0-1) ... 217s Setting up libxrender1:armhf (1:0.9.12-1) ... 217s Setting up lammps-data (20250204+dfsg.1-2) ... 217s Setting up libxcb-render0:armhf (1.17.0-2build1) ... 217s Setting up libglvnd0:armhf (1.7.0-1build2) ... 217s Setting up libxcb-glx0:armhf (1.17.0-2build1) ... 217s Setting up x11-common (1:7.7+24ubuntu1) ... 217s Setting up libdeflate0:armhf (1.23-2) ... 217s Setting up libcurl3t64-gnutls:armhf (8.14.1-2ubuntu1) ... 217s Setting up libxcb-shm0:armhf (1.17.0-2build1) ... 217s Setting up libgomp1:armhf (15.2.0-5ubuntu1) ... 217s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 217s Setting up libaec0:armhf (1.1.3-1) ... 217s Setting up libopengl0:armhf (1.7.0-1build2) ... 217s Setting up libxxf86vm1:armhf (1:1.1.4-1build4) ... 217s Setting up libxcb-present0:armhf (1.17.0-2build1) ... 217s Setting up libtheoraenc1:armhf (1.2.0~alpha1+dfsg-6) ... 217s Setting up libblas3:armhf (3.12.1-6build1) ... 217s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 217s Setting up libfreetype6:armhf (2.13.3+dfsg-1build1) ... 217s Setting up libxcb-sync1:armhf (1.17.0-2build1) ... 217s Setting up libjsoncpp26:armhf (1.9.6-3) ... 217s Setting up libslurm42t64 (24.11.5-4) ... 217s Setting up fonts-dejavu-mono (2.37-8) ... 217s Setting up libhwloc15:armhf (2.12.2-1) ... 217s Setting up libtcl8.6:armhf (8.6.17+dfsg-1) ... 217s Setting up libllvm20:armhf (1:20.1.8-0ubuntu4) ... 217s Setting up fonts-dejavu-core (2.37-8) ... 217s Setting up libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 217s Setting up libfftw3-double3:armhf (3.3.10-2fakesync1build2) ... 217s Setting up libgfortran5:armhf (15.2.0-5ubuntu1) ... 217s Setting up libvulkan1:armhf (1.4.321.0-1) ... 217s Setting up libwebp7:armhf (1.5.0-0.1) ... 217s Setting up libmpich12:armhf (4.3.0+really4.2.1-1build1) ... 217s Setting up libxshmfence1:armhf (1.3.3-1) ... 217s Setting up libxcb-randr0:armhf (1.17.0-2build1) ... 217s Setting up libxss1:armhf (1:1.2.3-1build3) ... 217s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 217s Setting up libsz2:armhf (1.1.3-1) ... 217s Setting up libdrm-amdgpu1:armhf (2.4.125-1) ... 217s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 217s Setting up mesa-libgallium:armhf (25.2.3-1ubuntu1) ... 217s Setting up liblapack3:armhf (3.12.1-6build1) ... 217s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 217s Setting up libgbm1:armhf (25.2.3-1ubuntu1) ... 217s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 217s Setting up libgl1-mesa-dri:armhf (25.2.3-1ubuntu1) ... 217s Setting up hwloc-nox (2.12.2-1) ... 217s Setting up libkim-api2:armhf (2.3.0-1ubuntu1) ... 217s Setting up libtbbbind-2-5:armhf (2022.1.0-1) ... 217s Setting up libhdf5-310:armhf (1.14.5+repack-3build1) ... 217s Setting up libtiff6:armhf (4.7.0-3ubuntu3) ... 217s Setting up libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 217s Setting up libhdf5-hl-310:armhf (1.14.5+repack-3build1) ... 217s Setting up libxft2:armhf (2.3.6-1build1) ... 217s Setting up libglx-mesa0:armhf (25.2.3-1ubuntu1) ... 217s Setting up libglx0:armhf (1.7.0-1build2) ... 217s Setting up libproj25:armhf (9.6.0-1) ... 217s Setting up mpich (4.3.0+really4.2.1-1build1) ... 217s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 217s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 217s Setting up libtk8.6:armhf (8.6.17-1) ... 217s Setting up libnetcdf22:armhf (1:4.9.3-1build1) ... 217s Setting up mpi-default-bin (1.18) ... 217s Setting up libtbb12:armhf (2022.1.0-1) ... 217s Setting up libcairo2:armhf (1.18.4-1build1) ... 217s Setting up libgl1:armhf (1.7.0-1build2) ... 217s Setting up libtheoradec1:armhf (1.2.0~alpha1+dfsg-6) ... 217s Setting up libglew2.2:armhf (2.2.0-4build1) ... 217s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 217s Setting up libvtk9.3:armhf (9.3.0+dfsg1-4ubuntu2) ... 217s Setting up liblammps0t64:armhf (20250204+dfsg.1-2) ... 217s Setting up lammps (20250204+dfsg.1-2) ... 217s Processing triggers for man-db (2.13.1-1) ... 218s Processing triggers for libc-bin (2.42-0ubuntu3) ... 226s autopkgtest [21:16:23]: test crack: [----------------------- 228s LAMMPS (4 Feb 2025) 228s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 228s using 1 OpenMP thread(s) per MPI task 228s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 228s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 228s 2 by 1 by 1 MPI processor grid 228s Created 8141 atoms 228s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 228s create_atoms CPU = 0.001 seconds 228s 302 atoms in group lower 228s 302 atoms in group upper 228s 604 atoms in group boundary 228s 7537 atoms in group mobile 228s 841 atoms in group leftupper 228s 841 atoms in group leftlower 228s Setting atom values ... 228s 841 settings made for type 228s Setting atom values ... 228s 841 settings made for type 228s Setting atom values ... 228s 302 settings made for type 228s Setting atom values ... 228s 302 settings made for type 228s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 228s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 228s Neighbor list info ... 228s update: every = 1 steps, delay = 5 steps, check = yes 228s max neighbors/atom: 2000, page size: 100000 228s master list distance cutoff = 2.8 228s ghost atom cutoff = 2.8 228s binsize = 1.4, bins = 80 56 1 228s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 228s (1) pair lj/cut, perpetual 228s attributes: half, newton on 228s pair build: half/bin/atomonly/newton 228s stencil: half/bin/2d 228s bin: standard 228s Setting up Verlet run ... 228s Unit style : lj 228s Current step : 0 228s Time step : 0.003 228s Per MPI rank memory allocation (min/avg/max) = 2.784 | 2.784 | 2.784 Mbytes 228s Step Temp E_pair E_mol TotEng Press Volume 228s 0 0.065993465 -3.2595015 0 -3.1984123 -0.035939913 8605.5917 228s 200 0.060035253 -3.2531886 0 -3.1976149 -0.22757684 8638.5331 228s 400 0.06054278 -3.2510706 0 -3.1950271 -0.42811733 8677.8288 228s 600 0.060576995 -3.246816 0 -3.1907408 -0.60017647 8717.6131 228s 800 0.060802753 -3.2413477 0 -3.1850635 -0.74499308 8756.4512 228s 1000 0.061812114 -3.2349942 0 -3.1777756 -0.87130079 8796.9575 229s 1200 0.06317147 -3.2277552 0 -3.1692783 -0.98010628 8823.1488 229s 1400 0.065125405 -3.2198031 0 -3.1595175 -1.0690179 8858.8358 229s 1600 0.06725411 -3.2111272 0 -3.148871 -1.1440993 8892.6607 229s 1800 0.069389572 -3.2019689 0 -3.137736 -1.199078 8933.7591 229s 2000 0.071276448 -3.1921621 0 -3.1261826 -1.239553 8969.0463 229s 2200 0.073243486 -3.1818809 0 -3.1140805 -1.264839 8997.6559 229s 2400 0.075063494 -3.1711703 0 -3.1016851 -1.2772278 9038.4932 229s 2600 0.076789207 -3.1600658 0 -3.0889832 -1.2754953 9073.4997 230s 2800 0.07875979 -3.1487143 0 -3.0758075 -1.2637926 9106.2245 230s 3000 0.080591853 -3.1372361 0 -3.0626334 -1.2388824 9142.7862 230s 3200 0.08227693 -3.125423 0 -3.0492605 -1.2055283 9169.4322 230s 3400 0.084289444 -3.1136554 0 -3.03563 -1.1672422 9204.8205 230s 3600 0.086720297 -3.1021183 0 -3.0218427 -1.126381 9233.2656 230s 3800 0.089264018 -3.0909262 0 -3.0082959 -1.0899774 9265.4143 230s 4000 0.091377688 -3.0795096 0 -2.9949227 -1.0580229 9297.6799 231s 4200 0.092665135 -3.0678736 0 -2.9820949 -1.0390124 9331.6135 231s 4400 0.09055434 -3.0560482 0 -2.9722234 -1.0323741 9362.2075 231s 4600 0.088763719 -3.0446018 0 -2.9624346 -1.027693 9391.6949 231s 4800 0.089467982 -3.0337452 0 -2.950926 -1.0232092 9427.4155 231s 5000 0.089910902 -3.0237571 0 -2.9405279 -1.0174796 9452.031 231s Loop time of 3.30345 on 2 procs for 5000 steps with 8141 atoms 231s 231s Performance: 392317.528 tau/day, 1513.571 timesteps/s, 12.322 Matom-step/s 231s 99.3% CPU use with 2 MPI tasks x 1 OpenMP threads 231s 231s MPI task timing breakdown: 231s Section | min time | avg time | max time |%varavg| %total 231s --------------------------------------------------------------- 231s Pair | 2.6418 | 2.6453 | 2.6488 | 0.2 | 80.08 231s Neigh | 0.12242 | 0.12628 | 0.13013 | 1.1 | 3.82 231s Comm | 0.12262 | 0.13897 | 0.15531 | 4.4 | 4.21 231s Output | 0.0014613 | 0.0020672 | 0.0026732 | 1.3 | 0.06 231s Modify | 0.24309 | 0.24717 | 0.25125 | 0.8 | 7.48 231s Other | | 0.1436 | | | 4.35 231s 231s Nlocal: 4070.5 ave 4085 max 4056 min 231s Histogram: 1 0 0 0 0 0 0 0 0 1 231s Nghost: 207 ave 208 max 206 min 231s Histogram: 1 0 0 0 0 0 0 0 0 1 231s Neighs: 35700 ave 35927 max 35473 min 231s Histogram: 1 0 0 0 0 0 0 0 0 1 231s 231s Total # of neighbors = 71400 231s Ave neighs/atom = 8.7704213 231s Neighbor list builds = 106 231s Dangerous builds = 0 231s Total wall time: 0:00:03 231s LAMMPS (4 Feb 2025) 231s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 231s using 1 OpenMP thread(s) per MPI task 231s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 231s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 231s 1 by 1 by 1 MPI processor grid 231s Created 8141 atoms 231s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 231s create_atoms CPU = 0.001 seconds 231s 302 atoms in group lower 231s 302 atoms in group upper 231s 604 atoms in group boundary 231s 7537 atoms in group mobile 231s 841 atoms in group leftupper 231s 841 atoms in group leftlower 231s Setting atom values ... 231s 841 settings made for type 231s Setting atom values ... 231s 841 settings made for type 231s Setting atom values ... 231s 302 settings made for type 231s Setting atom values ... 231s 302 settings made for type 231s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 231s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 231s Neighbor list info ... 231s update: every = 1 steps, delay = 5 steps, check = yes 231s max neighbors/atom: 2000, page size: 100000 231s master list distance cutoff = 2.8 231s ghost atom cutoff = 2.8 231s binsize = 1.4, bins = 80 56 1 231s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 231s (1) pair lj/cut, perpetual 231s attributes: half, newton on 231s pair build: half/bin/atomonly/newton 231s stencil: half/bin/2d 231s bin: standard 231s Setting up Verlet run ... 231s Unit style : lj 231s Current step : 0 231s Time step : 0.003 231s Per MPI rank memory allocation (min/avg/max) = 2.8 | 2.8 | 2.8 Mbytes 231s Step Temp E_pair E_mol TotEng Press Volume 231s 0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917 231s 200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101 232s 400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464 232s 600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569 232s 800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226 232s 1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116 233s 1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863 233s 1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893 233s 1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772 234s 1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017 234s 2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853 234s 2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136 234s 2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991 235s 2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325 235s 2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526 235s 3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552 235s 3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003 236s 3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909 236s 3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783 236s 3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348 236s 4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82 237s 4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113 237s 4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666 237s 4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925 238s 4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122 238s 5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637 238s Loop time of 6.69418 on 1 procs for 5000 steps with 8141 atoms 238s 238s Performance: 193601.070 tau/day, 746.918 timesteps/s, 6.081 Matom-step/s 238s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads 238s 238s MPI task timing breakdown: 238s Section | min time | avg time | max time |%varavg| %total 238s --------------------------------------------------------------- 238s Pair | 5.6264 | 5.6264 | 5.6264 | 0.0 | 84.05 238s Neigh | 0.23747 | 0.23747 | 0.23747 | 0.0 | 3.55 238s Comm | 0.031163 | 0.031163 | 0.031163 | 0.0 | 0.47 238s Output | 0.0038304 | 0.0038304 | 0.0038304 | 0.0 | 0.06 238s Modify | 0.53672 | 0.53672 | 0.53672 | 0.0 | 8.02 238s Other | | 0.2586 | | | 3.86 238s 238s Nlocal: 8141 ave 8141 max 8141 min 238s Histogram: 1 0 0 0 0 0 0 0 0 0 238s Nghost: 0 ave 0 max 0 min 238s Histogram: 1 0 0 0 0 0 0 0 0 0 238s Neighs: 71389 ave 71389 max 71389 min 238s Histogram: 1 0 0 0 0 0 0 0 0 0 238s 238s Total # of neighbors = 71389 238s Ave neighs/atom = 8.7690701 238s Neighbor list builds = 100 238s Dangerous builds = 0 238s Total wall time: 0:00:06 238s run: OK 238s autopkgtest [21:16:35]: test crack: -----------------------] 242s crack PASS 242s autopkgtest [21:16:39]: test crack: - - - - - - - - - - results - - - - - - - - - - 246s autopkgtest [21:16:43]: test dipole: preparing testbed 247s Reading package lists... 248s Building dependency tree... 248s Reading state information... 248s Solving dependencies... 249s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 256s autopkgtest [21:16:53]: test dipole: [----------------------- 258s LAMMPS (4 Feb 2025) 258s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 258s using 1 OpenMP thread(s) per MPI task 258s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 258s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 258s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 258s 2 by 1 by 1 MPI processor grid 258s Created 200 atoms 258s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 258s create_atoms CPU = 0.001 seconds 258s Setting atom values ... 258s 200 settings made for mass 258s Setting atom values ... 258s 200 settings made for dipole/random 258s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 258s Neighbor list info ... 258s update: every = 1 steps, delay = 0 steps, check = yes 258s max neighbors/atom: 2000, page size: 100000 258s master list distance cutoff = 2.8 258s ghost atom cutoff = 2.8 258s binsize = 1.4, bins = 13 13 2 258s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 258s (1) pair lj/cut/dipole/cut, perpetual 258s attributes: half, newton on 258s pair build: half/bin/atomonly/newton 258s stencil: half/bin/2d 258s bin: standard 258s Setting up Verlet run ... 258s Unit style : lj 258s Current step : 0 258s Time step : 0.005 258s Per MPI rank memory allocation (min/avg/max) = 4.549 | 4.549 | 4.549 Mbytes 258s Step Temp E_pair c_erot TotEng Press 258s 0 0 -2.0965715 0 -2.0965715 -2.4759659 258s 500 0.37155664 -2.7150631 0.22689419 -2.3453642 -0.33510922 258s 1000 0.42354552 -2.749888 0.21162528 -2.3284602 -0.11120147 259s 1500 0.39778312 -2.7597475 0.24737266 -2.3639533 -0.33856087 259s 2000 0.44906427 -2.8037479 0.24422576 -2.356929 0.15010432 259s 2500 0.46058471 -2.8143585 0.25012657 -2.3560767 -0.38282545 259s 3000 0.47344306 -2.8070454 0.22839921 -2.3359696 0.0086809905 259s 3500 0.40527008 -2.7047531 0.20199859 -2.3015094 0.28576366 259s 4000 0.45532509 -2.7724376 0.22443356 -2.3193892 -0.026546855 259s 4500 0.43501879 -2.7267497 0.20510275 -2.293906 -0.063127027 259s 5000 0.42443514 -2.745851 0.24060818 -2.3235381 -0.025742709 259s 5500 0.3839334 -2.7073937 0.24270814 -2.32538 -0.07170774 259s 6000 0.42922278 -2.7478329 0.25153908 -2.3207562 -0.47398846 259s 6500 0.45362461 -2.7967795 0.2756071 -2.345423 0.064335127 259s 7000 0.426427 -2.7100719 0.21223279 -2.2857771 0.23817765 259s 7500 0.44329907 -2.7592192 0.25431233 -2.3181366 -0.48160925 259s 8000 0.45710982 -2.746352 0.23112717 -2.2915277 0.067805988 259s 8500 0.45706146 -2.7008059 0.20546196 -2.2460298 -0.11582213 259s 9000 0.46491089 -2.7354016 0.23514028 -2.2728153 -0.25398947 259s 9500 0.44183004 -2.6848933 0.22534954 -2.2452724 -0.047314023 259s 10000 0.42741048 -2.7131911 0.27211413 -2.2879177 0.12679961 259s Loop time of 0.716504 on 2 procs for 10000 steps with 200 atoms 259s 259s Performance: 6029279.631 tau/day, 13956.666 timesteps/s, 2.791 Matom-step/s 259s 97.5% CPU use with 2 MPI tasks x 1 OpenMP threads 259s 259s MPI task timing breakdown: 259s Section | min time | avg time | max time |%varavg| %total 259s --------------------------------------------------------------- 259s Pair | 0.33855 | 0.3656 | 0.39264 | 4.5 | 51.03 259s Neigh | 0.015847 | 0.016757 | 0.017667 | 0.7 | 2.34 259s Comm | 0.22106 | 0.24793 | 0.27481 | 5.4 | 34.60 259s Output | 0.00096873 | 0.0011722 | 0.0013756 | 0.6 | 0.16 259s Modify | 0.033762 | 0.034481 | 0.0352 | 0.4 | 4.81 259s Other | | 0.05056 | | | 7.06 259s 259s Nlocal: 100 ave 106 max 94 min 259s Histogram: 1 0 0 0 0 0 0 0 0 1 259s Nghost: 118.5 ave 120 max 117 min 259s Histogram: 1 0 0 0 0 0 0 0 0 1 259s Neighs: 827.5 ave 911 max 744 min 259s Histogram: 1 0 0 0 0 0 0 0 0 1 259s 259s Total # of neighbors = 1655 259s Ave neighs/atom = 8.275 259s Neighbor list builds = 692 259s Dangerous builds = 0 259s Total wall time: 0:00:00 259s LAMMPS (4 Feb 2025) 259s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 259s using 1 OpenMP thread(s) per MPI task 259s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 259s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 259s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 259s 1 by 1 by 1 MPI processor grid 259s Created 200 atoms 259s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 259s create_atoms CPU = 0.000 seconds 259s Setting atom values ... 259s 200 settings made for mass 259s Setting atom values ... 259s 200 settings made for dipole/random 259s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 259s Neighbor list info ... 259s update: every = 1 steps, delay = 0 steps, check = yes 259s max neighbors/atom: 2000, page size: 100000 259s master list distance cutoff = 2.8 259s ghost atom cutoff = 2.8 259s binsize = 1.4, bins = 13 13 2 259s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 259s (1) pair lj/cut/dipole/cut, perpetual 259s attributes: half, newton on 259s pair build: half/bin/atomonly/newton 259s stencil: half/bin/2d 259s bin: standard 259s Setting up Verlet run ... 259s Unit style : lj 259s Current step : 0 259s Time step : 0.005 259s Per MPI rank memory allocation (min/avg/max) = 4.55 | 4.55 | 4.55 Mbytes 259s Step Temp E_pair c_erot TotEng Press 259s 0 0 -2.0965715 0 -2.0965715 -2.4759659 259s 500 0.37155664 -2.7150631 0.22689419 -2.3453642 -0.33510922 259s 1000 0.42354552 -2.749888 0.21162528 -2.3284602 -0.11120147 259s 1500 0.39778312 -2.7597475 0.24737266 -2.3639533 -0.33856086 259s 2000 0.44906527 -2.8037488 0.24422567 -2.3569289 0.15010101 259s 2500 0.46052127 -2.8142136 0.25010172 -2.355995 -0.38222495 259s 3000 0.48349143 -2.8019094 0.21892648 -2.3208354 -0.021940474 260s 3500 0.42818128 -2.7407155 0.22510159 -2.3146751 -0.01916692 260s 4000 0.43447865 -2.7251092 0.21179003 -2.292803 -0.054070562 260s 4500 0.49679675 -2.7760513 0.19789317 -2.2817386 -0.01374163 260s 5000 0.45369814 -2.7436186 0.22108827 -2.2921889 0.032452862 260s 5500 0.49381571 -2.8052843 0.24840557 -2.3139377 -0.011483656 260s 6000 0.47486262 -2.762914 0.230038 -2.2904257 0.35084172 260s 6500 0.47834729 -2.7628296 0.23242786 -2.286874 -0.084199114 260s 7000 0.4554671 -2.7485479 0.25152556 -2.2953581 -0.41657484 260s 7500 0.48688446 -2.7468396 0.22672266 -2.2623895 0.19798746 260s 8000 0.42093195 -2.6889197 0.24972685 -2.2700924 -0.048022487 260s 8500 0.44505913 -2.65779 0.18787506 -2.2149561 0.23409841 260s 9000 0.48102255 -2.7186808 0.22041232 -2.2400634 0.26761374 260s 9500 0.41955498 -2.688272 0.26237731 -2.2708148 0.1556688 260s 10000 0.47397757 -2.683164 0.2078595 -2.2115563 -0.21881739 260s Loop time of 0.906217 on 1 procs for 10000 steps with 200 atoms 260s 260s Performance: 4767070.823 tau/day, 11034.886 timesteps/s, 2.207 Matom-step/s 260s 98.4% CPU use with 1 MPI tasks x 1 OpenMP threads 260s 260s MPI task timing breakdown: 260s Section | min time | avg time | max time |%varavg| %total 260s --------------------------------------------------------------- 260s Pair | 0.73698 | 0.73698 | 0.73698 | 0.0 | 81.33 260s Neigh | 0.032376 | 0.032376 | 0.032376 | 0.0 | 3.57 260s Comm | 0.046565 | 0.046565 | 0.046565 | 0.0 | 5.14 260s Output | 0.00085685 | 0.00085685 | 0.00085685 | 0.0 | 0.09 260s Modify | 0.060692 | 0.060692 | 0.060692 | 0.0 | 6.70 260s Other | | 0.02874 | | | 3.17 260s 260s Nlocal: 200 ave 200 max 200 min 260s Histogram: 1 0 0 0 0 0 0 0 0 0 260s Nghost: 166 ave 166 max 166 min 260s Histogram: 1 0 0 0 0 0 0 0 0 0 260s Neighs: 1624 ave 1624 max 1624 min 260s Histogram: 1 0 0 0 0 0 0 0 0 0 260s 260s Total # of neighbors = 1624 260s Ave neighs/atom = 8.12 260s Neighbor list builds = 703 260s Dangerous builds = 0 260s Total wall time: 0:00:00 260s run: OK 260s autopkgtest [21:16:57]: test dipole: -----------------------] 264s dipole PASS 264s autopkgtest [21:17:01]: test dipole: - - - - - - - - - - results - - - - - - - - - - 268s autopkgtest [21:17:05]: test ellipse: preparing testbed 270s Reading package lists... 270s Building dependency tree... 270s Reading state information... 270s Solving dependencies... 271s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 279s autopkgtest [21:17:16]: test ellipse: [----------------------- 281s LAMMPS (4 Feb 2025) 281s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 281s using 1 OpenMP thread(s) per MPI task 281s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 281s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 281s 2 by 1 by 1 MPI processor grid 281s Created 400 atoms 281s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 281s create_atoms CPU = 0.001 seconds 281s Setting atom values ... 281s 29 settings made for type/fraction 281s Setting atom values ... 281s 371 settings made for mass 281s Setting atom values ... 281s 29 settings made for mass 281s Setting atom values ... 281s 371 settings made for shape 281s Setting atom values ... 281s 29 settings made for shape 281s Setting atom values ... 281s 400 settings made for quat/random 281s 371 atoms in group spheroid 281s 281s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 281s 281s Your simulation uses code contributions which should be cited: 281s - pair gayberne command: doi:10.1063/1.3058435 281s The log file lists these citations in BibTeX format. 281s 281s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 281s 281s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 281s Neighbor list info ... 281s update: every = 1 steps, delay = 0 steps, check = yes 281s max neighbors/atom: 2000, page size: 100000 281s master list distance cutoff = 4.8 281s ghost atom cutoff = 4.8 281s binsize = 2.4, bins = 59 59 3 281s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 281s (1) pair gayberne, perpetual 281s attributes: half, newton on 281s pair build: half/bin/atomonly/newton 281s stencil: half/bin/2d 281s bin: standard 281s Setting up Verlet run ... 281s Unit style : lj 281s Current step : 0 281s Time step : 0.002 281s Per MPI rank memory allocation (min/avg/max) = 4.306 | 4.306 | 4.306 Mbytes 281s Step c_rot E_pair TotEng Press Volume 281s 0 2.3158404 0 2.394 0.04788 20000 281s 100 1.7101139 0 1.7678302 0.034413192 20548.286 281s 200 2.3115592 0 2.3895743 0.04649702 20556.796 281s 300 1.831333 0 1.8931405 0.041256922 18354.646 281s 400 2.1838099 -0.00017499954 2.2573384 0.066506278 13574.023 281s 500 1.9604824 -0.024753591 2.0018228 0.09726581 8392.5882 281s 600 1.983652 -0.13957983 1.858954 0.28044314 4590.4733 281s 700 2.0349282 -0.7537042 1.2545559 0.45904399 2452.437 281s 800 2.1883376 -1.7033514 0.37402366 1.4284826 1377.0458 281s 900 1.8893439 -3.2012297 -1.3190748 3.1235376 889.49388 281s 1000 1.5818588 -4.6980931 -3.1320854 3.6494701 700.71079 281s 1100 1.743968 -5.3117051 -3.573368 1.7907876 666.1204 281s 1200 2.1788951 -5.0690852 -2.8893841 1.0317884 697.08645 281s 1300 2.0067166 -4.6588703 -2.6387448 -0.19855863 763.72651 281s 1400 2.1020191 -4.2786372 -2.1756186 0.5410189 815.37712 281s 1500 1.805494 -4.1713612 -2.3732785 0.88817983 855.41486 281s 1600 2.1414975 -3.9792878 -1.8690882 0.79530678 899.00645 281s 1700 1.9971755 -3.8166601 -1.8380659 0.41343091 945.60821 281s 1800 2.0033499 -3.7524192 -1.7481879 0.76104973 973.71402 281s 1900 2.0083456 -3.7603247 -1.7442111 0.74095064 988.03964 281s 2000 1.952518 -3.6531717 -1.7078818 0.50248125 989.96894 281s Loop time of 0.465834 on 2 procs for 2000 steps with 400 atoms 281s 281s Performance: 741894.581 tau/day, 4293.371 timesteps/s, 1.717 Matom-step/s 281s 96.9% CPU use with 2 MPI tasks x 1 OpenMP threads 281s 281s MPI task timing breakdown: 281s Section | min time | avg time | max time |%varavg| %total 281s --------------------------------------------------------------- 281s Pair | 0.19466 | 0.22162 | 0.24857 | 5.7 | 47.57 281s Neigh | 0.01143 | 0.011487 | 0.011544 | 0.1 | 2.47 281s Comm | 0.060821 | 0.087955 | 0.11509 | 9.1 | 18.88 281s Output | 0.014271 | 0.014589 | 0.014906 | 0.3 | 3.13 281s Modify | 0.11328 | 0.11407 | 0.11486 | 0.2 | 24.49 281s Other | | 0.01612 | | | 3.46 281s 281s Nlocal: 200 ave 211 max 189 min 281s Histogram: 1 0 0 0 0 0 0 0 0 1 281s Nghost: 215 ave 217 max 213 min 281s Histogram: 1 0 0 0 0 0 0 0 0 1 281s Neighs: 1561 ave 1651 max 1471 min 281s Histogram: 1 0 0 0 0 0 0 0 0 1 281s 281s Total # of neighbors = 3122 281s Ave neighs/atom = 7.805 281s Neighbor list builds = 346 281s Dangerous builds = 0 281s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 281s Setting up Verlet run ... 281s Unit style : lj 281s Current step : 2000 281s Time step : 0.002 281s Per MPI rank memory allocation (min/avg/max) = 6.461 | 6.461 | 6.461 Mbytes 281s Step c_rot E_pair TotEng Press Volume 281s 2000 1.952518 -3.6531717 -1.7078818 0.50248125 989.96894 281s 2100 1.9040485 -3.6005672 -1.6802923 0.39862443 989.96894 281s 2200 1.8951971 -3.5921565 -1.6947175 1.0260215 989.96894 281s 2300 2.0029243 -3.7081933 -1.6838652 0.66970186 989.96894 281s 2400 2.027189 -3.7314224 -1.7100024 0.89700378 989.96894 281s 2500 2.0661215 -3.7753463 -1.702413 0.57671879 989.96894 281s 2600 2.0610733 -3.7707904 -1.7111988 0.90914683 989.96894 281s 2700 2.0505106 -3.7599067 -1.7337499 0.65660966 989.96894 281s 2800 2.1106444 -3.8219338 -1.7370714 0.55276913 989.96894 281s 2900 2.0347978 -3.7428385 -1.7135242 0.69752989 989.96894 281s 3000 2.0331089 -3.7397511 -1.7515341 0.052123917 989.96894 281s 3100 1.9983479 -3.7074978 -1.7158075 0.7551458 989.96894 281s 3200 2.1299896 -3.8449355 -1.7171591 1.055861 989.96894 281s 3300 2.079427 -3.7934717 -1.684941 1.1625179 989.96894 281s 3400 2.1499496 -3.8651326 -1.703348 0.58109397 989.96894 281s 3500 2.0901278 -3.8054829 -1.699465 1.0231781 989.96894 282s 3600 2.1041735 -3.8168043 -1.6893938 1.0813513 989.96894 282s 3700 2.0650932 -3.7777761 -1.7224926 1.3120953 989.96894 282s 3800 2.0166275 -3.7282861 -1.7416258 0.78824642 989.96894 282s 3900 2.0726099 -3.7842546 -1.7339991 0.92130013 989.96894 282s 4000 2.1298275 -3.8450909 -1.7237177 0.95785441 989.96894 282s Loop time of 0.451942 on 2 procs for 2000 steps with 400 atoms 282s 282s Performance: 764700.105 tau/day, 4425.348 timesteps/s, 1.770 Matom-step/s 282s 96.8% CPU use with 2 MPI tasks x 1 OpenMP threads 282s 282s MPI task timing breakdown: 282s Section | min time | avg time | max time |%varavg| %total 282s --------------------------------------------------------------- 282s Pair | 0.28215 | 0.28854 | 0.29493 | 1.2 | 63.84 282s Neigh | 0.0030335 | 0.0033088 | 0.003584 | 0.5 | 0.73 282s Comm | 0.071705 | 0.078671 | 0.085637 | 2.5 | 17.41 282s Output | 0.015154 | 0.015507 | 0.015861 | 0.3 | 3.43 282s Modify | 0.042336 | 0.046191 | 0.050046 | 1.8 | 10.22 282s Other | | 0.01972 | | | 4.36 282s 282s Nlocal: 200 ave 228 max 172 min 282s Histogram: 1 0 0 0 0 0 0 0 0 1 282s Nghost: 209 ave 215 max 203 min 282s Histogram: 1 0 0 0 0 0 0 0 0 1 282s Neighs: 1639.5 ave 1963 max 1316 min 282s Histogram: 1 0 0 0 0 0 0 0 0 1 282s 282s Total # of neighbors = 3279 282s Ave neighs/atom = 8.1975 282s Neighbor list builds = 50 282s Dangerous builds = 0 282s Total wall time: 0:00:00 282s LAMMPS (4 Feb 2025) 282s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 282s using 1 OpenMP thread(s) per MPI task 282s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 282s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 282s 1 by 1 by 1 MPI processor grid 282s Created 400 atoms 282s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 282s create_atoms CPU = 0.000 seconds 282s Setting atom values ... 282s 29 settings made for type/fraction 282s Setting atom values ... 282s 371 settings made for mass 282s Setting atom values ... 282s 29 settings made for mass 282s Setting atom values ... 282s 371 settings made for shape 282s Setting atom values ... 282s 29 settings made for shape 282s Setting atom values ... 282s 400 settings made for quat/random 282s 371 atoms in group spheroid 282s 282s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 282s 282s Your simulation uses code contributions which should be cited: 282s - pair gayberne command: doi:10.1063/1.3058435 282s The log file lists these citations in BibTeX format. 282s 282s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 282s 282s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 282s Neighbor list info ... 282s update: every = 1 steps, delay = 0 steps, check = yes 282s max neighbors/atom: 2000, page size: 100000 282s master list distance cutoff = 4.8 282s ghost atom cutoff = 4.8 282s binsize = 2.4, bins = 59 59 3 282s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 282s (1) pair gayberne, perpetual 282s attributes: half, newton on 282s pair build: half/bin/atomonly/newton 282s stencil: half/bin/2d 282s bin: standard 282s Setting up Verlet run ... 282s Unit style : lj 282s Current step : 0 282s Time step : 0.002 282s Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes 282s Step c_rot E_pair TotEng Press Volume 282s 0 2.3158404 0 2.394 0.04788 20000 282s 100 1.7101139 0 1.7678302 0.034413192 20548.286 282s 200 2.3115592 0 2.3895743 0.04649702 20556.796 282s 300 1.831333 0 1.8931405 0.041256922 18354.646 282s 400 2.1838099 -0.00017499954 2.2573384 0.066506278 13574.023 282s 500 1.9604824 -0.024753591 2.0018228 0.09726581 8392.5882 282s 600 1.983652 -0.13957983 1.858954 0.28044314 4590.4733 282s 700 2.0349282 -0.7537042 1.2545559 0.45904399 2452.437 282s 800 2.1883376 -1.7033514 0.37402366 1.4284826 1377.0458 282s 900 1.8893439 -3.2012297 -1.3190748 3.1235376 889.49388 282s 1000 1.5818588 -4.6980931 -3.1320854 3.6494701 700.71079 282s 1100 1.743968 -5.3117051 -3.573368 1.7907876 666.1204 282s 1200 2.1788951 -5.0690852 -2.8893841 1.0317884 697.08645 282s 1300 2.0067166 -4.6588703 -2.6387448 -0.19855863 763.72651 282s 1400 2.1020191 -4.2786372 -2.1756186 0.5410189 815.37712 282s 1500 1.805494 -4.1713612 -2.3732785 0.88817983 855.41486 282s 1600 2.1414975 -3.9792878 -1.8690882 0.79530678 899.00645 282s 1700 1.9971755 -3.8166601 -1.8380659 0.41343091 945.60821 282s 1800 2.0033499 -3.7524192 -1.7481879 0.76104973 973.71402 282s 1900 2.0083456 -3.7603247 -1.7442111 0.74095064 988.03964 282s 2000 1.952518 -3.6531717 -1.7078818 0.50248126 989.96894 282s Loop time of 0.686799 on 1 procs for 2000 steps with 400 atoms 282s 282s Performance: 503203.878 tau/day, 2912.059 timesteps/s, 1.165 Matom-step/s 282s 97.3% CPU use with 1 MPI tasks x 1 OpenMP threads 282s 282s MPI task timing breakdown: 282s Section | min time | avg time | max time |%varavg| %total 282s --------------------------------------------------------------- 282s Pair | 0.45064 | 0.45064 | 0.45064 | 0.0 | 65.61 282s Neigh | 0.022588 | 0.022588 | 0.022588 | 0.0 | 3.29 282s Comm | 0.017056 | 0.017056 | 0.017056 | 0.0 | 2.48 282s Output | 0.025322 | 0.025322 | 0.025322 | 0.0 | 3.69 282s Modify | 0.15968 | 0.15968 | 0.15968 | 0.0 | 23.25 282s Other | | 0.01151 | | | 1.68 282s 282s Nlocal: 400 ave 400 max 400 min 282s Histogram: 1 0 0 0 0 0 0 0 0 0 282s Nghost: 276 ave 276 max 276 min 282s Histogram: 1 0 0 0 0 0 0 0 0 0 282s Neighs: 3122 ave 3122 max 3122 min 282s Histogram: 1 0 0 0 0 0 0 0 0 0 282s 282s Total # of neighbors = 3122 282s Ave neighs/atom = 7.805 282s Neighbor list builds = 346 282s Dangerous builds = 0 282s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 282s Setting up Verlet run ... 282s Unit style : lj 282s Current step : 2000 282s Time step : 0.002 282s Per MPI rank memory allocation (min/avg/max) = 6.488 | 6.488 | 6.488 Mbytes 282s Step c_rot E_pair TotEng Press Volume 282s 2000 1.952518 -3.6531717 -1.7078818 0.50248126 989.96894 282s 2100 1.9040485 -3.6005672 -1.6802923 0.39862445 989.96894 282s 2200 1.895197 -3.5921565 -1.6947175 1.0260215 989.96894 283s 2300 2.0029243 -3.7081933 -1.6838652 0.66970181 989.96894 283s 2400 2.027189 -3.7314224 -1.7100024 0.89700379 989.96894 283s 2500 2.0661215 -3.7753462 -1.702413 0.57671817 989.96894 283s 2600 2.0610736 -3.7707907 -1.7111987 0.90914701 989.96894 283s 2700 2.0505116 -3.7599078 -1.7337505 0.65660586 989.96894 283s 2800 2.1106432 -3.8219326 -1.7370705 0.55276071 989.96894 283s 2900 2.0347944 -3.7428349 -1.7135244 0.69753379 989.96894 283s 3000 2.033092 -3.739734 -1.7515318 0.05219688 989.96894 283s 3100 1.9983562 -3.707508 -1.7158135 0.75509883 989.96894 283s 3200 2.1298063 -3.8447512 -1.7171502 1.0568228 989.96894 283s 3300 2.0791428 -3.7931834 -1.6847086 1.1627829 989.96894 283s 3400 2.1498359 -3.8650337 -1.7032074 0.58032554 989.96894 283s 3500 2.0904809 -3.805739 -1.6981978 1.0208226 989.96894 283s 3600 2.1048714 -3.8174009 -1.691117 1.0550021 989.96894 283s 3700 2.0745341 -3.7874614 -1.7155849 1.3035756 989.96894 283s 3800 2.0439729 -3.7569157 -1.7364298 0.76483567 989.96894 283s 3900 2.0498921 -3.7613373 -1.7218798 1.0164212 989.96894 283s 4000 2.0584264 -3.7719072 -1.7005071 0.89500692 989.96894 283s Loop time of 0.729419 on 1 procs for 2000 steps with 400 atoms 283s 283s Performance: 473801.601 tau/day, 2741.907 timesteps/s, 1.097 Matom-step/s 283s 98.2% CPU use with 1 MPI tasks x 1 OpenMP threads 283s 283s MPI task timing breakdown: 283s Section | min time | avg time | max time |%varavg| %total 283s --------------------------------------------------------------- 283s Pair | 0.57734 | 0.57734 | 0.57734 | 0.0 | 79.15 283s Neigh | 0.0062893 | 0.0062893 | 0.0062893 | 0.0 | 0.86 283s Comm | 0.016994 | 0.016994 | 0.016994 | 0.0 | 2.33 283s Output | 0.025247 | 0.025247 | 0.025247 | 0.0 | 3.46 283s Modify | 0.09288 | 0.09288 | 0.09288 | 0.0 | 12.73 283s Other | | 0.01066 | | | 1.46 283s 283s Nlocal: 400 ave 400 max 400 min 283s Histogram: 1 0 0 0 0 0 0 0 0 0 283s Nghost: 284 ave 284 max 284 min 283s Histogram: 1 0 0 0 0 0 0 0 0 0 283s Neighs: 3286 ave 3286 max 3286 min 283s Histogram: 1 0 0 0 0 0 0 0 0 0 283s 283s Total # of neighbors = 3286 283s Ave neighs/atom = 8.215 283s Neighbor list builds = 50 283s Dangerous builds = 0 283s Total wall time: 0:00:01 283s LAMMPS (4 Feb 2025) 283s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 283s using 1 OpenMP thread(s) per MPI task 283s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 283s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 283s 2 by 1 by 1 MPI processor grid 283s Created 400 atoms 283s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 283s create_atoms CPU = 0.000 seconds 283s Setting atom values ... 283s 29 settings made for type/fraction 283s Setting atom values ... 283s 371 settings made for mass 283s Setting atom values ... 283s 29 settings made for mass 283s Setting atom values ... 283s 371 settings made for shape 283s Setting atom values ... 283s 29 settings made for shape 283s Setting atom values ... 283s 400 settings made for quat/random 283s 371 atoms in group spheroid 283s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 283s Neighbor list info ... 283s update: every = 1 steps, delay = 0 steps, check = yes 283s max neighbors/atom: 2000, page size: 100000 283s master list distance cutoff = 4.8 283s ghost atom cutoff = 4.8 283s binsize = 2.4, bins = 59 59 3 283s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 283s (1) pair resquared, perpetual 283s attributes: half, newton on 283s pair build: half/bin/atomonly/newton 283s stencil: half/bin/2d 283s bin: standard 283s Setting up Verlet run ... 283s Unit style : lj 283s Current step : 0 283s Time step : 0.002 283s Per MPI rank memory allocation (min/avg/max) = 4.306 | 4.306 | 4.306 Mbytes 283s Step c_rot E_pair TotEng Press Volume 283s 0 2.3158404 0 2.394 0.04788 20000 283s 100 1.7101139 0 1.7678302 0.034413192 20548.286 283s 200 2.3115592 0 2.3895743 0.04649702 20556.796 283s 300 1.831333 0 1.8931405 0.041256922 18354.646 283s 400 2.1837684 -8.9738883e-06 2.2574616 0.066522186 13574.035 283s 500 1.9709471 0.0022832653 2.017568 0.098398099 8395.6884 283s 600 2.1312025 0.15575534 2.2465639 0.43878461 4664.4094 283s 700 1.9768729 0.20704026 2.1544534 0.85727857 2661.7782 283s 800 1.8049358 0.20410493 1.965827 1.2647972 1769.9195 283s 900 1.8115555 0.2163004 1.9984639 1.6554526 1443.3838 284s 1000 1.9171641 0.2328859 2.1621182 1.7795638 1436.7766 284s 1100 1.9523886 0.09158383 2.0589755 0.91188602 1668.1861 284s 1200 2.0844678 0.062228051 2.0997798 0.63282414 2088.0586 284s 1300 1.9225253 0.052820284 1.9484124 0.44379326 2643.4175 284s 1400 2.1265088 0.033305088 2.1345672 0.34979266 3172.6223 284s 1500 1.9551661 0.053995306 2.0077177 0.34810901 3444.8372 284s 1600 2.15222 0.057084004 2.1910214 0.39212275 3290.66 284s 1700 2.0126393 0.092807299 2.0739086 0.53567035 2812.2166 284s 1800 2.1109716 0.18678852 2.2572287 1.0092292 2267.5536 284s 1900 1.9107655 0.26801333 2.1635401 1.5374301 1862.3897 284s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 284s Loop time of 0.723327 on 2 procs for 2000 steps with 400 atoms 284s 284s Performance: 477792.511 tau/day, 2765.003 timesteps/s, 1.106 Matom-step/s 284s 98.4% CPU use with 2 MPI tasks x 1 OpenMP threads 284s 284s MPI task timing breakdown: 284s Section | min time | avg time | max time |%varavg| %total 284s --------------------------------------------------------------- 284s Pair | 0.45331 | 0.46282 | 0.47233 | 1.4 | 63.98 284s Neigh | 0.011668 | 0.011837 | 0.012005 | 0.2 | 1.64 284s Comm | 0.078549 | 0.088001 | 0.097453 | 3.2 | 12.17 284s Output | 0.015949 | 0.016281 | 0.016613 | 0.3 | 2.25 284s Modify | 0.12307 | 0.12489 | 0.12671 | 0.5 | 17.27 284s Other | | 0.0195 | | | 2.70 284s 284s Nlocal: 200 ave 210 max 190 min 284s Histogram: 1 0 0 0 0 0 0 0 0 1 284s Nghost: 164 ave 168 max 160 min 284s Histogram: 1 0 0 0 0 0 0 0 0 1 284s Neighs: 910 ave 958 max 862 min 284s Histogram: 1 0 0 0 0 0 0 0 0 1 284s 284s Total # of neighbors = 1820 284s Ave neighs/atom = 4.55 284s Neighbor list builds = 420 284s Dangerous builds = 0 284s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 284s Setting up Verlet run ... 284s Unit style : lj 284s Current step : 2000 284s Time step : 0.002 284s Per MPI rank memory allocation (min/avg/max) = 6.452 | 6.452 | 6.452 Mbytes 284s Step c_rot E_pair TotEng Press Volume 284s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 284s 2100 1.9990056 0.14555548 2.132148 1.1813518 1639.6982 284s 2200 1.9913934 0.15343329 2.1279388 1.2079524 1639.6982 284s 2300 1.9931915 0.15156716 2.1646511 1.1963228 1639.6982 284s 2400 1.9969018 0.14779678 2.1413044 1.1999441 1639.6982 284s 2500 1.9401284 0.20640998 2.168038 1.4643778 1639.6982 284s 2600 1.9492999 0.19710633 2.136292 1.3812079 1639.6982 284s 2700 2.0106221 0.13364603 2.1384766 1.1322764 1639.6982 284s 2800 1.9890373 0.15589593 2.1204126 1.2343376 1639.6982 284s 2900 1.9922852 0.15256969 2.0956529 1.2419163 1639.6982 284s 3000 1.9618081 0.18405952 2.1392907 1.3468022 1639.6982 285s 3100 1.9208141 0.22640846 2.1223515 1.6487932 1639.6982 285s 3200 1.9201454 0.22718165 2.1360381 1.5370081 1639.6982 285s 3300 2.0073185 0.13690917 2.1185875 1.1974013 1639.6982 285s 3400 2.0179674 0.12601938 2.1227813 1.0847666 1639.6982 285s 3500 1.9561087 0.18991131 2.1150364 1.337739 1639.6982 285s 3600 1.9971228 0.14756112 2.1401422 1.2026317 1639.6982 285s 3700 1.9731706 0.1723087 2.1473857 1.273159 1639.6982 285s 3800 2.0001051 0.14443379 2.0995168 1.1502317 1639.6982 285s 3900 1.9911498 0.15371621 2.1424901 1.2279921 1639.6982 285s 4000 1.9825331 0.16267827 2.0899844 1.2154927 1639.6982 285s Loop time of 1.04051 on 2 procs for 2000 steps with 400 atoms 285s 285s Performance: 332143.433 tau/day, 1922.126 timesteps/s, 768.851 katom-step/s 285s 99.4% CPU use with 2 MPI tasks x 1 OpenMP threads 285s 285s MPI task timing breakdown: 285s Section | min time | avg time | max time |%varavg| %total 285s --------------------------------------------------------------- 285s Pair | 0.79681 | 0.83697 | 0.87713 | 4.4 | 80.44 285s Neigh | 0.0023271 | 0.0024555 | 0.002584 | 0.3 | 0.24 285s Comm | 0.080612 | 0.12073 | 0.16084 | 11.5 | 11.60 285s Output | 0.015024 | 0.015359 | 0.015693 | 0.3 | 1.48 285s Modify | 0.043713 | 0.046276 | 0.048839 | 1.2 | 4.45 285s Other | | 0.01873 | | | 1.80 285s 285s Nlocal: 200 ave 212 max 188 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s Nghost: 171.5 ave 173 max 170 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s Neighs: 880.5 ave 946 max 815 min 285s Histogram: 1 0 0 0 0 0 0 0 0 1 285s 285s Total # of neighbors = 1761 285s Ave neighs/atom = 4.4025 285s Neighbor list builds = 49 285s Dangerous builds = 0 285s Total wall time: 0:00:01 285s LAMMPS (4 Feb 2025) 285s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 285s using 1 OpenMP thread(s) per MPI task 285s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 285s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 285s 1 by 1 by 1 MPI processor grid 285s Created 400 atoms 285s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 285s create_atoms CPU = 0.000 seconds 285s Setting atom values ... 285s 29 settings made for type/fraction 285s Setting atom values ... 285s 371 settings made for mass 285s Setting atom values ... 285s 29 settings made for mass 285s Setting atom values ... 285s 371 settings made for shape 285s Setting atom values ... 285s 29 settings made for shape 285s Setting atom values ... 285s 400 settings made for quat/random 285s 371 atoms in group spheroid 285s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 285s Neighbor list info ... 285s update: every = 1 steps, delay = 0 steps, check = yes 285s max neighbors/atom: 2000, page size: 100000 285s master list distance cutoff = 4.8 285s ghost atom cutoff = 4.8 285s binsize = 2.4, bins = 59 59 3 285s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 285s (1) pair resquared, perpetual 285s attributes: half, newton on 285s pair build: half/bin/atomonly/newton 285s stencil: half/bin/2d 285s bin: standard 285s Setting up Verlet run ... 285s Unit style : lj 285s Current step : 0 285s Time step : 0.002 285s Per MPI rank memory allocation (min/avg/max) = 4.315 | 4.315 | 4.315 Mbytes 285s Step c_rot E_pair TotEng Press Volume 285s 0 2.3158404 0 2.394 0.04788 20000 285s 100 1.7101139 0 1.7678302 0.034413192 20548.286 285s 200 2.3115592 0 2.3895743 0.04649702 20556.796 285s 300 1.831333 0 1.8931405 0.041256922 18354.646 285s 400 2.1837684 -8.9738883e-06 2.2574616 0.066522186 13574.035 285s 500 1.9709471 0.0022832653 2.017568 0.098398099 8395.6884 285s 600 2.1312025 0.15575534 2.2465639 0.43878461 4664.4094 285s 700 1.9768729 0.20704026 2.1544534 0.85727857 2661.7782 285s 800 1.8049358 0.20410493 1.965827 1.2647972 1769.9195 285s 900 1.8115555 0.2163004 1.9984639 1.6554526 1443.3838 286s 1000 1.9171641 0.2328859 2.1621182 1.7795638 1436.7766 286s 1100 1.9523886 0.09158383 2.0589755 0.91188602 1668.1861 286s 1200 2.0844678 0.062228051 2.0997798 0.63282414 2088.0586 286s 1300 1.9225253 0.052820284 1.9484124 0.44379326 2643.4175 286s 1400 2.1265088 0.033305088 2.1345672 0.34979266 3172.6223 286s 1500 1.9551661 0.053995306 2.0077177 0.34810901 3444.8372 286s 1600 2.15222 0.057084004 2.1910214 0.39212275 3290.66 286s 1700 2.0126393 0.092807299 2.0739086 0.53567035 2812.2166 286s 1800 2.1109716 0.18678852 2.2572287 1.0092292 2267.5536 286s 1900 1.9107655 0.26801333 2.1635401 1.5374301 1862.3897 286s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 286s Loop time of 1.15575 on 1 procs for 2000 steps with 400 atoms 286s 286s Performance: 299027.334 tau/day, 1730.482 timesteps/s, 692.193 katom-step/s 286s 99.2% CPU use with 1 MPI tasks x 1 OpenMP threads 286s 286s MPI task timing breakdown: 286s Section | min time | avg time | max time |%varavg| %total 286s --------------------------------------------------------------- 286s Pair | 0.92967 | 0.92967 | 0.92967 | 0.0 | 80.44 286s Neigh | 0.023233 | 0.023233 | 0.023233 | 0.0 | 2.01 286s Comm | 0.01266 | 0.01266 | 0.01266 | 0.0 | 1.10 286s Output | 0.023918 | 0.023918 | 0.023918 | 0.0 | 2.07 286s Modify | 0.15559 | 0.15559 | 0.15559 | 0.0 | 13.46 286s Other | | 0.01068 | | | 0.92 286s 286s Nlocal: 400 ave 400 max 400 min 286s Histogram: 1 0 0 0 0 0 0 0 0 0 286s Nghost: 206 ave 206 max 206 min 286s Histogram: 1 0 0 0 0 0 0 0 0 0 286s Neighs: 1820 ave 1820 max 1820 min 286s Histogram: 1 0 0 0 0 0 0 0 0 0 286s 286s Total # of neighbors = 1820 286s Ave neighs/atom = 4.55 286s Neighbor list builds = 420 286s Dangerous builds = 0 286s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 286s Setting up Verlet run ... 286s Unit style : lj 286s Current step : 2000 286s Time step : 0.002 286s Per MPI rank memory allocation (min/avg/max) = 6.479 | 6.479 | 6.479 Mbytes 286s Step c_rot E_pair TotEng Press Volume 286s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 286s 2100 1.9990056 0.14555548 2.132148 1.1813518 1639.6982 286s 2200 1.9913934 0.15343329 2.1279388 1.2079524 1639.6982 287s 2300 1.9931915 0.15156716 2.1646511 1.1963228 1639.6982 287s 2400 1.9969018 0.14779678 2.1413044 1.1999441 1639.6982 287s 2500 1.9401284 0.20640998 2.168038 1.4643778 1639.6982 287s 2600 1.9492999 0.19710633 2.136292 1.3812079 1639.6982 287s 2700 2.0106221 0.13364602 2.1384766 1.1322764 1639.6982 287s 2800 1.9890373 0.15589593 2.1204126 1.2343376 1639.6982 287s 2900 1.9922852 0.15256971 2.0956529 1.2419164 1639.6982 287s 3000 1.9618081 0.18405952 2.1392906 1.3468022 1639.6982 287s 3100 1.9208145 0.22640808 2.1223513 1.6487904 1639.6982 287s 3200 1.9201455 0.22718157 2.136038 1.5370079 1639.6982 287s 3300 2.0073203 0.13690734 2.1185861 1.1973861 1639.6982 288s 3400 2.0179675 0.12601936 2.1227814 1.0847665 1639.6982 288s 3500 1.956107 0.18991303 2.1150378 1.3377467 1639.6982 288s 3600 1.9971207 0.14756338 2.1401427 1.2026439 1639.6982 288s 3700 1.9731785 0.17230049 2.1473634 1.2731222 1639.6982 288s 3800 2.0001027 0.14443629 2.0995017 1.1502317 1639.6982 288s 3900 1.9911478 0.15371832 2.1424588 1.2279852 1639.6982 288s 4000 1.9824541 0.16275998 2.0899755 1.2158078 1639.6982 288s Loop time of 1.83059 on 1 procs for 2000 steps with 400 atoms 288s 288s Performance: 188792.094 tau/day, 1092.547 timesteps/s, 437.019 katom-step/s 288s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads 288s 288s MPI task timing breakdown: 288s Section | min time | avg time | max time |%varavg| %total 288s --------------------------------------------------------------- 288s Pair | 1.687 | 1.687 | 1.687 | 0.0 | 92.16 288s Neigh | 0.0046803 | 0.0046803 | 0.0046803 | 0.0 | 0.26 288s Comm | 0.012222 | 0.012222 | 0.012222 | 0.0 | 0.67 288s Output | 0.024222 | 0.024222 | 0.024222 | 0.0 | 1.32 288s Modify | 0.092687 | 0.092687 | 0.092687 | 0.0 | 5.06 288s Other | | 0.009758 | | | 0.53 288s 288s Nlocal: 400 ave 400 max 400 min 288s Histogram: 1 0 0 0 0 0 0 0 0 0 288s Nghost: 215 ave 215 max 215 min 288s Histogram: 1 0 0 0 0 0 0 0 0 0 288s Neighs: 1761 ave 1761 max 1761 min 288s Histogram: 1 0 0 0 0 0 0 0 0 0 288s 288s Total # of neighbors = 1761 288s Ave neighs/atom = 4.4025 288s Neighbor list builds = 49 288s Dangerous builds = 0 288s Total wall time: 0:00:02 288s run: OK 288s autopkgtest [21:17:25]: test ellipse: -----------------------] 292s ellipse PASS 292s autopkgtest [21:17:29]: test ellipse: - - - - - - - - - - results - - - - - - - - - - 296s autopkgtest [21:17:33]: test flow: preparing testbed 298s Reading package lists... 298s Building dependency tree... 298s Reading state information... 299s Solving dependencies... 300s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 307s autopkgtest [21:17:44]: test flow: [----------------------- 309s LAMMPS (4 Feb 2025) 309s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 309s using 1 OpenMP thread(s) per MPI task 309s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 309s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 309s 2 by 1 by 1 MPI processor grid 309s Created 420 atoms 309s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 309s create_atoms CPU = 0.000 seconds 309s 60 atoms in group lower 309s 60 atoms in group upper 309s 120 atoms in group boundary 309s 300 atoms in group flow 309s Setting atom values ... 309s 60 settings made for type 309s Setting atom values ... 309s 60 settings made for type 309s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 309s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 309s Neighbor list info ... 309s update: every = 1 steps, delay = 5 steps, check = yes 309s max neighbors/atom: 2000, page size: 100000 309s master list distance cutoff = 1.42246 309s ghost atom cutoff = 1.42246 309s binsize = 0.71123, bins = 37 32 1 309s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 309s (1) pair lj/cut, perpetual 309s attributes: half, newton on 309s pair build: half/bin/atomonly/newton 309s stencil: half/bin/2d 309s bin: standard 309s Setting up Verlet run ... 309s Unit style : lj 309s Current step : 0 309s Time step : 0.003 309s Per MPI rank memory allocation (min/avg/max) = 2.731 | 2.731 | 2.731 Mbytes 309s Step Temp E_pair E_mol TotEng Press Volume 309s 0 1 0 0 0.71190476 0.52314537 571.54286 309s 500 1.0951876 -0.33403931 0 0.44562996 3.2502319 571.54286 309s 1000 1 -0.3731019 0 0.33880286 2.8561715 571.54286 309s 1500 1.0366879 -0.36031105 0 0.37771198 3.0196355 571.54286 309s 2000 1 -0.41053 0 0.30137476 2.8651912 571.54286 309s 2500 1.1226657 -0.37033202 0 0.42889907 2.9449242 571.54286 309s 3000 1 -0.37829439 0 0.33361038 2.724957 571.54286 309s 3500 1.0214075 -0.4474262 0 0.27971864 2.4340575 571.54286 309s 4000 1 -0.42466402 0 0.28724075 2.6468652 571.54286 309s 4500 1.0385223 -0.4060451 0 0.33328387 2.8049948 571.54286 309s 5000 1 -0.44140506 0 0.2704997 2.5732992 571.54286 309s 5500 1.0412543 -0.42975001 0 0.31152391 2.5569509 571.54286 309s 6000 1 -0.40966109 0 0.30224367 2.3906115 571.54286 309s 6500 1.0821406 -0.37547129 0 0.39490976 2.5922081 571.54286 309s 7000 1 -0.41060008 0 0.30130468 2.8506205 571.54286 309s 7500 1.0819999 -0.43038503 0 0.33989586 2.6996672 571.54286 309s 8000 1 -0.3796336 0 0.33227116 2.5245689 571.54286 309s 8500 0.94746225 -0.40425285 0 0.27025004 2.5790953 571.54286 309s 9000 1 -0.4061947 0 0.30571006 2.3866707 571.54286 309s 9500 1.0336946 -0.4404991 0 0.29539298 2.2934496 571.54286 309s 10000 1 -0.44465733 0 0.26724744 2.2764313 571.54286 309s Loop time of 0.389514 on 2 procs for 10000 steps with 420 atoms 309s 309s Performance: 6654444.678 tau/day, 25673.012 timesteps/s, 10.783 Matom-step/s 309s 95.0% CPU use with 2 MPI tasks x 1 OpenMP threads 309s 309s MPI task timing breakdown: 309s Section | min time | avg time | max time |%varavg| %total 309s --------------------------------------------------------------- 309s Pair | 0.045851 | 0.045901 | 0.045951 | 0.0 | 11.78 309s Neigh | 0.021614 | 0.021681 | 0.021748 | 0.0 | 5.57 309s Comm | 0.22911 | 0.23056 | 0.232 | 0.3 | 59.19 309s Output | 0.0010148 | 0.0012939 | 0.0015729 | 0.8 | 0.33 309s Modify | 0.035229 | 0.035405 | 0.035582 | 0.1 | 9.09 309s Other | | 0.05468 | | | 14.04 309s 309s Nlocal: 210 ave 213 max 207 min 309s Histogram: 1 0 0 0 0 0 0 0 0 1 309s Nghost: 50.5 ave 51 max 50 min 309s Histogram: 1 0 0 0 0 0 0 0 0 1 309s Neighs: 480.5 ave 492 max 469 min 309s Histogram: 1 0 0 0 0 0 0 0 0 1 309s 309s Total # of neighbors = 961 309s Ave neighs/atom = 2.2880952 309s Neighbor list builds = 964 309s Dangerous builds = 0 309s Total wall time: 0:00:00 310s LAMMPS (4 Feb 2025) 310s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 310s using 1 OpenMP thread(s) per MPI task 310s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 310s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 310s 1 by 1 by 1 MPI processor grid 310s Created 420 atoms 310s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 310s create_atoms CPU = 0.000 seconds 310s 60 atoms in group lower 310s 60 atoms in group upper 310s 120 atoms in group boundary 310s 300 atoms in group flow 310s Setting atom values ... 310s 60 settings made for type 310s Setting atom values ... 310s 60 settings made for type 310s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 310s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 310s Neighbor list info ... 310s update: every = 1 steps, delay = 5 steps, check = yes 310s max neighbors/atom: 2000, page size: 100000 310s master list distance cutoff = 1.42246 310s ghost atom cutoff = 1.42246 310s binsize = 0.71123, bins = 37 32 1 310s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 310s (1) pair lj/cut, perpetual 310s attributes: half, newton on 310s pair build: half/bin/atomonly/newton 310s stencil: half/bin/2d 310s bin: standard 310s Setting up Verlet run ... 310s Unit style : lj 310s Current step : 0 310s Time step : 0.003 310s Per MPI rank memory allocation (min/avg/max) = 2.735 | 2.735 | 2.735 Mbytes 310s Step Temp E_pair E_mol TotEng Press Volume 310s 0 1 0 0 0.71190476 0.52314537 571.54286 310s 500 1.0644427 -0.31382888 0 0.44395296 3.0013076 571.54286 310s 1000 1 -0.42965445 0 0.28225032 2.9612165 571.54286 310s 1500 1.0739874 -0.41189772 0 0.35267901 2.5621951 571.54286 310s 2000 1 -0.40814263 0 0.30376214 2.9229587 571.54286 310s 2500 1.1929729 -0.38735055 0 0.46193257 2.8337691 571.54286 310s 3000 1 -0.44542386 0 0.2664809 2.7214531 571.54286 310s 3500 1.1553179 -0.42687142 0 0.39560493 2.5109633 571.54286 310s 4000 1 -0.40604742 0 0.30585734 2.7055928 571.54286 310s 4500 1.1498154 -0.44055268 0 0.37800642 2.5561154 571.54286 310s 5000 1 -0.41742254 0 0.29448222 2.4788457 571.54286 310s 5500 1.014604 -0.42503236 0 0.29726906 2.579664 571.54286 310s 6000 1 -0.41264837 0 0.29925639 2.5861705 571.54286 310s 6500 1.1443238 -0.4392768 0 0.37537274 2.2801246 571.54286 310s 7000 1 -0.38852754 0 0.32337722 2.3294037 571.54286 310s 7500 1.0568142 -0.42350098 0 0.32885011 2.3953589 571.54286 310s 8000 1 -0.39343 0 0.31847477 2.5701342 571.54286 310s 8500 1.0872157 -0.46282796 0 0.3111661 2.2892446 571.54286 310s 9000 1 -0.402333 0 0.30957177 2.4852035 571.54286 310s 9500 0.99889786 -0.46870263 0 0.24241751 2.3763314 571.54286 310s 10000 1 -0.43338695 0 0.27851782 2.405424 571.54286 310s Loop time of 0.240887 on 1 procs for 10000 steps with 420 atoms 310s 310s Performance: 10760229.921 tau/day, 41513.233 timesteps/s, 17.436 Matom-step/s 310s 94.1% CPU use with 1 MPI tasks x 1 OpenMP threads 310s 310s MPI task timing breakdown: 310s Section | min time | avg time | max time |%varavg| %total 310s --------------------------------------------------------------- 310s Pair | 0.089918 | 0.089918 | 0.089918 | 0.0 | 37.33 310s Neigh | 0.042894 | 0.042894 | 0.042894 | 0.0 | 17.81 310s Comm | 0.015641 | 0.015641 | 0.015641 | 0.0 | 6.49 310s Output | 0.0010049 | 0.0010049 | 0.0010049 | 0.0 | 0.42 310s Modify | 0.062109 | 0.062109 | 0.062109 | 0.0 | 25.78 310s Other | | 0.02932 | | | 12.17 310s 310s Nlocal: 420 ave 420 max 420 min 310s Histogram: 1 0 0 0 0 0 0 0 0 0 310s Nghost: 46 ave 46 max 46 min 310s Histogram: 1 0 0 0 0 0 0 0 0 0 310s Neighs: 952 ave 952 max 952 min 310s Histogram: 1 0 0 0 0 0 0 0 0 0 310s 310s Total # of neighbors = 952 310s Ave neighs/atom = 2.2666667 310s Neighbor list builds = 996 310s Dangerous builds = 0 310s Total wall time: 0:00:00 310s LAMMPS (4 Feb 2025) 310s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 310s using 1 OpenMP thread(s) per MPI task 310s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 310s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 310s 2 by 1 by 1 MPI processor grid 310s Created 420 atoms 310s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 310s create_atoms CPU = 0.000 seconds 310s 60 atoms in group lower 310s 60 atoms in group upper 310s 120 atoms in group boundary 310s 300 atoms in group flow 310s Setting atom values ... 310s 60 settings made for type 310s Setting atom values ... 310s 60 settings made for type 310s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 310s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 310s Neighbor list info ... 310s update: every = 1 steps, delay = 5 steps, check = yes 310s max neighbors/atom: 2000, page size: 100000 310s master list distance cutoff = 1.42246 310s ghost atom cutoff = 1.42246 310s binsize = 0.71123, bins = 37 32 1 310s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 310s (1) pair lj/cut, perpetual 310s attributes: half, newton on 310s pair build: half/bin/atomonly/newton 310s stencil: half/bin/2d 310s bin: standard 310s Setting up Verlet run ... 310s Unit style : lj 310s Current step : 0 310s Time step : 0.003 310s Per MPI rank memory allocation (min/avg/max) = 2.731 | 2.731 | 2.731 Mbytes 310s Step Temp E_pair E_mol TotEng Press Volume 310s 0 1 0 0 0.71190476 0.52314537 571.54286 310s 500 1.0758737 -0.36090417 0 0.40501541 2.7822308 575.0659 310s 1000 1 -0.35701441 0 0.35489035 2.0575313 585.71407 310s 1500 1.2368663 -0.37709732 0 0.50343367 1.4865879 587.193 310s 2000 1 -0.39362939 0 0.31827537 1.4236 578.9418 310s 2500 1.2272957 -0.423819 0 0.44989866 1.454461 570.15856 310s 3000 1 -0.49143429 0 0.22047048 1.5345942 554.98632 310s 3500 1.2445009 -0.59762587 0 0.28834022 1.8753189 537.01593 310s 4000 1 -0.69889809 0 0.013006674 2.1402865 521.46673 310s 4500 1.2185161 -0.73848066 0 0.12898676 2.7425317 507.73058 310s 5000 1 -0.79158059 0 -0.079675829 3.1146693 502.02129 310s 5500 1.23812 -0.76063102 0 0.12079254 2.6101517 503.98532 310s 6000 1 -0.68093927 0 0.030965489 2.4050071 506.73975 310s 6500 1.2305347 -0.71537739 0 0.16064612 2.0966847 510.57681 310s 7000 1 -0.69996568 0 0.011939084 2.0829242 513.97036 310s 7500 1.2387996 -0.67617771 0 0.20572962 1.9857051 511.54835 310s 8000 1 -0.72135901 0 -0.0094542445 2.3327964 508.8105 310s 8500 1.2500467 -0.77802894 0 0.11188529 2.2915813 505.72027 310s 9000 1 -0.77033319 0 -0.058428426 2.4993315 503.47206 310s 9500 1.2000703 -0.74305547 0 0.11128027 2.3321564 504.5062 310s 10000 1 -0.72090813 0 -0.0090033642 2.3379679 505.23554 310s Loop time of 0.350904 on 2 procs for 10000 steps with 420 atoms 310s 310s Performance: 7386642.102 tau/day, 28497.848 timesteps/s, 11.969 Matom-step/s 310s 95.1% CPU use with 2 MPI tasks x 1 OpenMP threads 310s 310s MPI task timing breakdown: 310s Section | min time | avg time | max time |%varavg| %total 310s --------------------------------------------------------------- 310s Pair | 0.050062 | 0.050477 | 0.050892 | 0.2 | 14.38 310s Neigh | 0.013041 | 0.013154 | 0.013268 | 0.1 | 3.75 310s Comm | 0.13217 | 0.13309 | 0.13401 | 0.3 | 37.93 310s Output | 0.00071321 | 0.0010511 | 0.001389 | 1.0 | 0.30 310s Modify | 0.10581 | 0.10781 | 0.10981 | 0.6 | 30.72 310s Other | | 0.04532 | | | 12.92 310s 310s Nlocal: 210 ave 213 max 207 min 310s Histogram: 1 0 0 0 0 0 0 0 0 1 310s Nghost: 50 ave 51 max 49 min 310s Histogram: 1 0 0 0 0 0 0 0 0 1 310s Neighs: 558.5 ave 573 max 544 min 310s Histogram: 1 0 0 0 0 0 0 0 0 1 310s 310s Total # of neighbors = 1117 310s Ave neighs/atom = 2.6595238 310s Neighbor list builds = 562 310s Dangerous builds = 0 310s Total wall time: 0:00:00 310s LAMMPS (4 Feb 2025) 310s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 310s using 1 OpenMP thread(s) per MPI task 310s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 310s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 310s 1 by 1 by 1 MPI processor grid 310s Created 420 atoms 310s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 310s create_atoms CPU = 0.000 seconds 310s 60 atoms in group lower 310s 60 atoms in group upper 310s 120 atoms in group boundary 310s 300 atoms in group flow 310s Setting atom values ... 310s 60 settings made for type 310s Setting atom values ... 310s 60 settings made for type 310s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 310s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 310s Neighbor list info ... 310s update: every = 1 steps, delay = 5 steps, check = yes 310s max neighbors/atom: 2000, page size: 100000 310s master list distance cutoff = 1.42246 310s ghost atom cutoff = 1.42246 310s binsize = 0.71123, bins = 37 32 1 310s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 310s (1) pair lj/cut, perpetual 310s attributes: half, newton on 310s pair build: half/bin/atomonly/newton 310s stencil: half/bin/2d 310s bin: standard 310s Setting up Verlet run ... 310s Unit style : lj 310s Current step : 0 310s Time step : 0.003 310s Per MPI rank memory allocation (min/avg/max) = 2.735 | 2.735 | 2.735 Mbytes 310s Step Temp E_pair E_mol TotEng Press Volume 310s 0 1 0 0 0.71190476 0.52314537 571.54286 310s 500 1.0990751 -0.36396768 0 0.41846911 2.522517 575.55806 310s 1000 1 -0.34609791 0 0.36580685 1.9736175 584.67179 310s 1500 1.2112861 -0.39062708 0 0.47169327 1.521881 587.24778 310s 2000 1 -0.39956949 0 0.31233527 1.2496669 583.00676 310s 2500 1.2236323 -0.40128446 0 0.46982521 1.4276891 570.03729 310s 3000 1 -0.48849353 0 0.22341123 1.5091361 553.64637 310s 3500 1.2404547 -0.63017551 0 0.25291012 1.768107 535.22599 310s 4000 1 -0.71545964 0 -0.0035548789 2.2079822 516.73161 310s 4500 1.2270239 -0.78740977 0 0.086114399 2.6094706 503.17906 310s 5000 1 -0.8367971 0 -0.12489233 3.186175 498.73275 310s 5500 1.2257721 -0.77200456 0 0.10062844 2.6369599 502.75573 310s 6000 1 -0.6766551 0 0.035249665 2.2092944 512.08396 310s 6500 1.2201203 -0.67876788 0 0.18984154 1.8784541 517.92079 311s 7000 1 -0.68555696 0 0.026347797 1.8142356 516.44963 311s 7500 1.2482526 -0.7345934 0 0.15404357 2.0253109 511.4042 311s 8000 1 -0.70068231 0 0.011222455 2.1739831 504.55527 311s 8500 1.2151375 -0.77680457 0 0.088257564 2.6264947 498.00946 311s 9000 1 -0.74461165 0 -0.032706889 2.574656 498.14523 311s 9500 1.2047533 -0.75768848 0 0.09998113 2.4174997 501.8877 311s 10000 1 -0.67361996 0 0.038284798 2.2310948 507.57444 311s Loop time of 0.273476 on 1 procs for 10000 steps with 420 atoms 311s 311s Performance: 9477969.077 tau/day, 36566.239 timesteps/s, 15.358 Matom-step/s 311s 93.5% CPU use with 1 MPI tasks x 1 OpenMP threads 311s 311s MPI task timing breakdown: 311s Section | min time | avg time | max time |%varavg| %total 311s --------------------------------------------------------------- 311s Pair | 0.099737 | 0.099737 | 0.099737 | 0.0 | 36.47 311s Neigh | 0.024506 | 0.024506 | 0.024506 | 0.0 | 8.96 311s Comm | 0.012525 | 0.012525 | 0.012525 | 0.0 | 4.58 311s Output | 0.0013004 | 0.0013004 | 0.0013004 | 0.0 | 0.48 311s Modify | 0.1074 | 0.1074 | 0.1074 | 0.0 | 39.27 311s Other | | 0.02801 | | | 10.24 311s 311s Nlocal: 420 ave 420 max 420 min 311s Histogram: 1 0 0 0 0 0 0 0 0 0 311s Nghost: 48 ave 48 max 48 min 311s Histogram: 1 0 0 0 0 0 0 0 0 0 311s Neighs: 1124 ave 1124 max 1124 min 311s Histogram: 1 0 0 0 0 0 0 0 0 0 311s 311s Total # of neighbors = 1124 311s Ave neighs/atom = 2.6761905 311s Neighbor list builds = 561 311s Dangerous builds = 0 311s Total wall time: 0:00:00 311s run: OK 311s autopkgtest [21:17:48]: test flow: -----------------------] 315s flow PASS 315s autopkgtest [21:17:52]: test flow: - - - - - - - - - - results - - - - - - - - - - 319s autopkgtest [21:17:56]: test friction: preparing testbed 320s Reading package lists... 321s Building dependency tree... 321s Reading state information... 321s Solving dependencies... 322s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 329s autopkgtest [21:18:06]: test friction: [----------------------- 331s LAMMPS (4 Feb 2025) 331s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 331s using 1 OpenMP thread(s) per MPI task 331s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 331s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 331s 2 by 1 by 1 MPI processor grid 331s Created 750 atoms 331s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 331s create_atoms CPU = 0.000 seconds 331s Created 750 atoms 331s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 331s create_atoms CPU = 0.000 seconds 331s Created 112 atoms 331s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 331s create_atoms CPU = 0.000 seconds 331s Created 112 atoms 331s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 331s create_atoms CPU = 0.000 seconds 331s 750 atoms in group lo 331s 862 atoms in group lo 331s 750 atoms in group hi 331s 862 atoms in group hi 331s 150 atoms in group lo-fixed 331s 150 atoms in group hi-fixed 331s 300 atoms in group boundary 331s 1424 atoms in group mobile 331s Setting atom values ... 331s 150 settings made for type 331s Setting atom values ... 331s 150 settings made for type 331s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 331s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 331s Neighbor list info ... 331s update: every = 1 steps, delay = 5 steps, check = yes 331s max neighbors/atom: 2000, page size: 100000 331s master list distance cutoff = 2.8 331s ghost atom cutoff = 2.8 331s binsize = 1.4, bins = 41 31 1 331s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 331s (1) pair lj/cut, perpetual 331s attributes: half, newton on 331s pair build: half/bin/atomonly/newton 331s stencil: half/bin/2d 331s bin: standard 331s Setting up Verlet run ... 331s Unit style : lj 331s Current step : 0 331s Time step : 0.0025 331s Per MPI rank memory allocation (min/avg/max) = 2.737 | 2.737 | 2.737 Mbytes 331s Step Temp E_pair E_mol TotEng Press Volume 331s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 331s 1000 0.081091635 -3.0930924 0 -3.0596257 -0.030127914 2444.9333 332s 2000 0.082087761 -3.0850474 0 -3.0511696 -0.44306626 2444.9333 332s 3000 0.088948343 -3.08139 0 -3.0446807 -0.25586469 2444.9333 332s 4000 0.091186493 -3.0656845 0 -3.0280515 -0.10060397 2444.9333 332s 5000 0.10802896 -3.0566391 0 -3.0120553 -0.13618814 2444.9333 332s 6000 0.1 -3.0489246 0 -3.0076543 -0.20314787 2444.9333 332s 7000 0.11587092 -3.0413277 0 -2.9935074 -0.37543734 2444.9333 333s 8000 0.1 -3.0296549 0 -2.9883846 -0.41894885 2444.9333 333s 9000 0.11363101 -3.0247314 0 -2.9778355 -0.43224741 2444.9333 333s 10000 0.11551834 -3.0287315 0 -2.9810568 -0.37046468 2444.9333 333s 11000 0.1131303 -3.0177397 0 -2.9710505 -0.48802477 2444.9333 333s 12000 0.1 -3.0280411 0 -2.9867708 -0.23387667 2444.9333 333s 13000 0.11507336 -3.0315952 0 -2.984104 -0.40349366 2444.9333 334s 14000 0.11501583 -3.0318726 0 -2.9844053 -0.31400965 2444.9333 334s 15000 0.10799871 -3.0337962 0 -2.9892248 -0.32505402 2444.9333 334s 16000 0.10673344 -3.0405071 0 -2.9964579 -0.24604448 2444.9333 334s 17000 0.10623843 -3.0391607 0 -2.9953158 -0.44372008 2444.9333 334s 18000 0.11358768 -3.0422681 0 -2.9953901 -0.30148543 2444.9333 334s 19000 0.11591119 -3.0468785 0 -2.9990416 -0.33570287 2444.9333 334s 20000 0.11149703 -3.0428984 0 -2.9968833 -0.34952494 2444.9333 334s Loop time of 3.29409 on 2 procs for 20000 steps with 1724 atoms 334s 334s Performance: 1311440.661 tau/day, 6071.485 timesteps/s, 10.467 Matom-step/s 334s 97.3% CPU use with 2 MPI tasks x 1 OpenMP threads 334s 334s MPI task timing breakdown: 334s Section | min time | avg time | max time |%varavg| %total 334s --------------------------------------------------------------- 334s Pair | 1.9116 | 2.0902 | 2.2687 | 12.3 | 63.45 334s Neigh | 0.10344 | 0.11537 | 0.12729 | 3.5 | 3.50 334s Comm | 0.44277 | 0.63487 | 0.82698 | 24.1 | 19.27 334s Output | 0.00095717 | 0.0012952 | 0.0016333 | 0.9 | 0.04 334s Modify | 0.22579 | 0.24666 | 0.26752 | 4.2 | 7.49 334s Other | | 0.2057 | | | 6.25 334s 334s Nlocal: 862 ave 868 max 856 min 334s Histogram: 1 0 0 0 0 0 0 0 0 1 334s Nghost: 160.5 ave 161 max 160 min 334s Histogram: 1 0 0 0 0 0 0 0 0 1 334s Neighs: 7178.5 ave 7223 max 7134 min 334s Histogram: 1 0 0 0 0 0 0 0 0 1 334s 334s Total # of neighbors = 14357 334s Ave neighs/atom = 8.3277262 334s Neighbor list builds = 716 334s Dangerous builds = 0 334s Total wall time: 0:00:03 335s LAMMPS (4 Feb 2025) 335s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 335s using 1 OpenMP thread(s) per MPI task 335s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 335s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 335s 1 by 1 by 1 MPI processor grid 335s Created 750 atoms 335s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 335s create_atoms CPU = 0.000 seconds 335s Created 750 atoms 335s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 335s create_atoms CPU = 0.000 seconds 335s Created 112 atoms 335s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 335s create_atoms CPU = 0.000 seconds 335s Created 112 atoms 335s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 335s create_atoms CPU = 0.000 seconds 335s 750 atoms in group lo 335s 862 atoms in group lo 335s 750 atoms in group hi 335s 862 atoms in group hi 335s 150 atoms in group lo-fixed 335s 150 atoms in group hi-fixed 335s 300 atoms in group boundary 335s 1424 atoms in group mobile 335s Setting atom values ... 335s 150 settings made for type 335s Setting atom values ... 335s 150 settings made for type 335s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:551) 335s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 335s Neighbor list info ... 335s update: every = 1 steps, delay = 5 steps, check = yes 335s max neighbors/atom: 2000, page size: 100000 335s master list distance cutoff = 2.8 335s ghost atom cutoff = 2.8 335s binsize = 1.4, bins = 41 31 1 335s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 335s (1) pair lj/cut, perpetual 335s attributes: half, newton on 335s pair build: half/bin/atomonly/newton 335s stencil: half/bin/2d 335s bin: standard 335s Setting up Verlet run ... 335s Unit style : lj 335s Current step : 0 335s Time step : 0.0025 335s Per MPI rank memory allocation (min/avg/max) = 2.746 | 2.746 | 2.746 Mbytes 335s Step Temp E_pair E_mol TotEng Press Volume 335s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 335s 1000 0.1 -3.0915072 0 -3.0502369 0.0099866805 2444.9333 335s 2000 0.1 -3.0826007 0 -3.0413304 -0.41998885 2444.9333 335s 3000 0.08982505 -3.0757908 0 -3.0387197 -0.25244271 2444.9333 336s 4000 0.098727892 -3.0666371 0 -3.0258918 -0.25382683 2444.9333 336s 5000 0.11345478 -3.0506905 0 -3.0038674 -0.029177812 2444.9333 336s 6000 0.11386723 -3.0515296 0 -3.0045363 -0.32135016 2444.9333 336s 7000 0.11555642 -3.0379879 0 -2.9902974 -0.40431666 2444.9333 337s 8000 0.10658282 -3.0364048 0 -2.9924178 -0.45722834 2444.9333 337s 9000 0.11650947 -3.0271611 0 -2.9790773 -0.4588819 2444.9333 337s 10000 0.10575546 -3.0298463 0 -2.9862007 -0.35241095 2444.9333 337s 11000 0.10953331 -3.0352955 0 -2.9900908 -0.4622173 2444.9333 338s 12000 0.11720787 -3.0378371 0 -2.989465 -0.27733023 2444.9333 338s 13000 0.11492573 -3.037974 0 -2.9905438 -0.43259084 2444.9333 338s 14000 0.11125454 -3.0413758 0 -2.9954607 -0.31244429 2444.9333 338s 15000 0.10882772 -3.0406062 0 -2.9956927 -0.30403665 2444.9333 339s 16000 0.1152685 -3.0433936 0 -2.9958219 -0.26659294 2444.9333 339s 17000 0.10840025 -3.0414208 0 -2.9966837 -0.36183887 2444.9333 339s 18000 0.11159326 -3.0416392 0 -2.9955843 -0.22725121 2444.9333 339s 19000 0.11530974 -3.0457005 0 -2.9981118 -0.36488457 2444.9333 340s 20000 0.1131733 -3.0417814 0 -2.9950744 -0.27902539 2444.9333 340s Loop time of 5.04355 on 1 procs for 20000 steps with 1724 atoms 340s 340s Performance: 856539.156 tau/day, 3965.459 timesteps/s, 6.836 Matom-step/s 340s 99.1% CPU use with 1 MPI tasks x 1 OpenMP threads 340s 340s MPI task timing breakdown: 340s Section | min time | avg time | max time |%varavg| %total 340s --------------------------------------------------------------- 340s Pair | 4.1181 | 4.1181 | 4.1181 | 0.0 | 81.65 340s Neigh | 0.21261 | 0.21261 | 0.21261 | 0.0 | 4.22 340s Comm | 0.057933 | 0.057933 | 0.057933 | 0.0 | 1.15 340s Output | 0.0015602 | 0.0015602 | 0.0015602 | 0.0 | 0.03 340s Modify | 0.47226 | 0.47226 | 0.47226 | 0.0 | 9.36 340s Other | | 0.1811 | | | 3.59 340s 340s Nlocal: 1724 ave 1724 max 1724 min 340s Histogram: 1 0 0 0 0 0 0 0 0 0 340s Nghost: 144 ave 144 max 144 min 340s Histogram: 1 0 0 0 0 0 0 0 0 0 340s Neighs: 14364 ave 14364 max 14364 min 340s Histogram: 1 0 0 0 0 0 0 0 0 0 340s 340s Total # of neighbors = 14364 340s Ave neighs/atom = 8.3317865 340s Neighbor list builds = 714 340s Dangerous builds = 0 340s Total wall time: 0:00:05 340s run: OK 340s autopkgtest [21:18:17]: test friction: -----------------------] 344s friction PASS 344s autopkgtest [21:18:21]: test friction: - - - - - - - - - - results - - - - - - - - - - 348s autopkgtest [21:18:25]: test hugo: preparing testbed 349s Reading package lists... 350s Building dependency tree... 350s Reading state information... 350s Solving dependencies... 351s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 358s autopkgtest [21:18:35]: test hugo: [----------------------- 360s LAMMPS (4 Feb 2025) 360s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 360s using 1 OpenMP thread(s) per MPI task 360s Lattice spacing in x,y,z = 1.4142135 2 2 360s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 360s 1 by 1 by 2 MPI processor grid 360s Created 1000 atoms 360s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 360s create_atoms CPU = 0.000 seconds 360s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 360s Neighbor list info ... 360s update: every = 1 steps, delay = 0 steps, check = yes 360s max neighbors/atom: 2000, page size: 100000 360s master list distance cutoff = 1.8475372 360s ghost atom cutoff = 1.8475372 360s binsize = 0.92376862, bins = 8 11 11 360s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 360s (1) pair lj/cubic, perpetual 360s attributes: half, newton on 360s pair build: half/bin/atomonly/newton 360s stencil: half/bin/3d 360s bin: standard 360s Setting up cg style minimization ... 360s Unit style : lj 360s Current step : 0 360s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 360s (src/min.cpp:219) 360s Per MPI rank memory allocation (min/avg/max) = 3.924 | 3.924 | 3.924 Mbytes 360s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 360s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 360s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 360s 134 0 -6.3344253 -6.3344253 -4.3497387e-13 -4.7220431e-13 -4.7089748e-13 6.9780267 9.8684199 9.8684199 360s Loop time of 0.040571 on 2 procs for 134 steps with 1000 atoms 360s 360s 97.5% CPU use with 2 MPI tasks x 1 OpenMP threads 360s 360s Minimization stats: 360s Stopping criterion = force tolerance 360s Energy initial, next-to-last, final = 360s -6.29375358358574 -6.33442531515467 -6.33442531515467 360s Force two-norm initial, final = 3395.2895 5.5900884e-10 360s Force max component initial, final = 1960.2713 3.2516979e-10 360s Final line search alpha, max atom move = 1 3.2516979e-10 360s Iterations, force evaluations = 134 137 360s 360s MPI task timing breakdown: 360s Section | min time | avg time | max time |%varavg| %total 360s --------------------------------------------------------------- 360s Pair | 0.022138 | 0.023985 | 0.025832 | 1.2 | 59.12 360s Neigh | 0.0003924 | 0.00043307 | 0.00047373 | 0.0 | 1.07 360s Comm | 0.0055787 | 0.0073414 | 0.0091042 | 2.1 | 18.10 360s Output | 2.816e-05 | 4.448e-05 | 6.0801e-05 | 0.0 | 0.11 360s Modify | 0 | 0 | 0 | 0.0 | 0.00 360s Other | | 0.008767 | | | 21.61 360s 360s Nlocal: 500 ave 550 max 450 min 360s Histogram: 1 0 0 0 0 0 0 0 0 1 360s Nghost: 1214 ave 1264 max 1164 min 360s Histogram: 1 0 0 0 0 0 0 0 0 1 360s Neighs: 10500 ave 11550 max 9450 min 360s Histogram: 1 0 0 0 0 0 0 0 0 1 360s 360s Total # of neighbors = 21000 360s Ave neighs/atom = 21 360s Neighbor list builds = 1 360s Dangerous builds = 0 360s System init for write_restart ... 360s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 360s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 360s using 1 OpenMP thread(s) per MPI task 360s Reading restart file ... 360s restart file = 4 Feb 2025, LAMMPS = 4 Feb 2025 360s restoring atom style atomic from restart 360s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 360s 1 by 1 by 2 MPI processor grid 360s restoring pair style lj/cubic from restart 360s 1000 atoms 360s read_restart CPU = 0.001 seconds 360s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 360s Neighbor list info ... 360s update: every = 1 steps, delay = 0 steps, check = yes 360s max neighbors/atom: 2000, page size: 100000 360s master list distance cutoff = 1.7475372 360s ghost atom cutoff = 1.7475372 360s binsize = 0.87376862, bins = 8 12 12 360s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 360s (1) pair lj/cubic, perpetual 360s attributes: half, newton on 360s pair build: half/bin/atomonly/newton 360s stencil: half/bin/3d 360s bin: standard 360s Setting up Verlet run ... 360s Unit style : lj 360s Current step : 0 360s Time step : 0.001 360s Per MPI rank memory allocation (min/avg/max) = 2.799 | 2.799 | 2.799 Mbytes 360s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 360s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355674 -0.00025875943 9.8684199 0 -0.004855272 2.3793218 0.0041072261 361s 1000 0.010142951 0.015199212 -2.1715786 -4183.8734 129.07448 58.487036 8.3141728 -4.1817171 0.93612119 23.511325 3.7371582 361s 2000 0.37217696 0.55770718 -5.501671 -1113.5078 12.361734 0.56717221 9.4220234 -1.1085639 -0.39798945 13.397419 0.62811105 361s 3000 0.52025677 0.77960476 -3.8549126 -3288.4446 57.946721 16.7702 8.5666574 -3.2853693 -0.20934692 17.195254 2.2940268 362s 4000 0.52000674 0.77923009 -4.0042813 -3180.1686 42.281055 5.2538452 8.5173574 -3.1769436 -0.37279124 14.42108 1.9958424 362s 5000 0.26632329 0.39908545 -5.1559109 -1725.4657 25.17764 3.3288258 8.8480337 -1.7207089 -0.22616494 12.779441 1.3411624 362s 6000 0.14673418 0.21988117 -3.7657368 -1845.8673 60.573444 14.615699 8.242708 -1.8423215 0.21289355 15.752155 2.6177037 363s 7000 0.085950705 0.12879713 -5.1644144 -1924.7174 30.48448 5.8732723 8.6787408 -1.9196818 -0.010600412 13.03827 1.5916113 363s 8000 0.040267888 0.060341431 -4.7547111 -1486.1603 41.506923 9.5593428 8.4878924 -1.4814659 0.11935469 14.137029 1.9986677 363s 9000 0.025458786 0.038149991 -4.5523455 -1642.5001 44.838555 9.9866475 8.4152155 -1.6379859 0.15016793 14.325688 2.1306608 364s 10000 0.013645992 0.020448519 -5.2852664 -2425.1699 28.141793 5.1524388 8.6994187 -2.419905 0.02671273 12.635999 1.516074 364s Loop time of 3.45276 on 2 procs for 10000 steps with 1000 atoms 364s 364s Performance: 250234.756 tau/day, 2896.236 timesteps/s, 2.896 Matom-step/s 364s 98.6% CPU use with 2 MPI tasks x 1 OpenMP threads 364s 364s MPI task timing breakdown: 364s Section | min time | avg time | max time |%varavg| %total 364s --------------------------------------------------------------- 364s Pair | 2.1249 | 2.1896 | 2.2543 | 4.4 | 63.42 364s Neigh | 0.085389 | 0.088978 | 0.092568 | 1.2 | 2.58 364s Comm | 0.45027 | 0.52134 | 0.59241 | 9.8 | 15.10 364s Output | 0.00091445 | 0.0010156 | 0.0011168 | 0.3 | 0.03 364s Modify | 0.56194 | 0.56452 | 0.56709 | 0.3 | 16.35 364s Other | | 0.08732 | | | 2.53 364s 364s Nlocal: 500 ave 510 max 490 min 364s Histogram: 1 0 0 0 0 0 0 0 0 1 364s Nghost: 1351.5 ave 1357 max 1346 min 364s Histogram: 1 0 0 0 0 0 0 0 0 1 364s Neighs: 10160.5 ave 10780 max 9541 min 364s Histogram: 1 0 0 0 0 0 0 0 0 1 364s 364s Total # of neighbors = 20321 364s Ave neighs/atom = 20.321 364s Neighbor list builds = 194 364s Dangerous builds = 0 364s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 364s using 1 OpenMP thread(s) per MPI task 364s Reading restart file ... 364s restart file = 4 Feb 2025, LAMMPS = 4 Feb 2025 364s restoring atom style atomic from restart 364s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 364s 1 by 1 by 2 MPI processor grid 364s restoring pair style lj/cubic from restart 364s 1000 atoms 364s read_restart CPU = 0.001 seconds 364s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 364s Neighbor list info ... 364s update: every = 1 steps, delay = 0 steps, check = yes 364s max neighbors/atom: 2000, page size: 100000 364s master list distance cutoff = 1.7475372 364s ghost atom cutoff = 1.7475372 364s binsize = 0.87376862, bins = 8 12 12 364s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 364s (1) pair lj/cubic, perpetual 364s attributes: half, newton on 364s pair build: half/bin/atomonly/newton 364s stencil: half/bin/3d 364s bin: standard 364s Setting up Verlet run ... 364s Unit style : lj 364s Current step : 0 364s Time step : 0.001 364s Per MPI rank memory allocation (min/avg/max) = 2.799 | 2.799 | 2.799 Mbytes 364s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 364s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355674 -0.00025875943 9.8684199 0 -0.004855272 2.3793218 0.0041072261 364s 1000 0.0062486434 0.0093635921 -5.9891167 -1670.9585 18.915821 7.5825014 9.233799 -1.6649788 0.023420172 13.975961 0.92134379 364s 2000 0.0067916638 0.010177308 -5.4565133 -2537.9542 37.064222 15.536207 8.949588 -2.5325079 0.10233218 16.324942 1.5455443 365s 3000 0.0073287622 0.01098215 -5.3664364 -2643.9475 39.90842 16.808813 8.915463 -2.638592 0.11823484 16.639094 1.6327251 365s 4000 0.0070205928 0.010520358 -5.3625886 -2655.7942 40.007504 16.850221 8.9144166 -2.6504422 0.11869019 16.650758 1.6356322 365s 5000 0.007504613 0.011245663 -5.3630526 -2664.53 39.995767 16.844528 8.9145098 -2.6591782 0.11842922 16.649115 1.6353137 366s 6000 0.0076250338 0.011426113 -5.3627977 -2673.3599 39.995632 16.842795 8.9145438 -2.6680085 0.11826685 16.649378 1.6352823 366s 7000 0.0075689977 0.011342143 -5.3621825 -2682.2145 40.003065 16.845001 8.9145477 -2.6768636 0.11817069 16.650959 1.6354309 366s 8000 0.0078519894 0.011766206 -5.3620929 -2691.0711 39.995512 16.838121 8.9145618 -2.6857208 0.11790857 16.649508 1.6352647 367s 9000 0.0084026053 0.012591304 -5.3624375 -2700.1249 40.00216 16.845103 8.9145931 -2.694775 0.11780799 16.65116 1.6353742 367s 10000 0.0087571135 0.013122535 -5.3624901 -2708.9831 39.996386 16.840912 8.9146292 -2.7036337 0.11756735 16.650267 1.6352259 367s Loop time of 3.32008 on 2 procs for 10000 steps with 1000 atoms 367s 367s Performance: 260234.832 tau/day, 3011.977 timesteps/s, 3.012 Matom-step/s 367s 98.3% CPU use with 2 MPI tasks x 1 OpenMP threads 367s 367s MPI task timing breakdown: 367s Section | min time | avg time | max time |%varavg| %total 367s --------------------------------------------------------------- 367s Pair | 1.9171 | 1.9584 | 1.9997 | 3.0 | 58.99 367s Neigh | 0.0045645 | 0.0045918 | 0.0046191 | 0.0 | 0.14 367s Comm | 0.43044 | 0.47155 | 0.51266 | 6.0 | 14.20 367s Output | 0.0014139 | 0.0014381 | 0.0014623 | 0.1 | 0.04 367s Modify | 0.78612 | 0.79022 | 0.79432 | 0.5 | 23.80 367s Other | | 0.09389 | | | 2.83 367s 367s Nlocal: 500 ave 503 max 497 min 367s Histogram: 1 0 0 0 0 0 0 0 0 1 367s Nghost: 1214 ave 1217 max 1211 min 367s Histogram: 1 0 0 0 0 0 0 0 0 1 367s Neighs: 10500 ave 10560 max 10440 min 367s Histogram: 1 0 0 0 0 0 0 0 0 1 367s 367s Total # of neighbors = 21000 367s Ave neighs/atom = 21 367s Neighbor list builds = 10 367s Dangerous builds = 0 367s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 367s using 1 OpenMP thread(s) per MPI task 367s Reading restart file ... 367s restart file = 4 Feb 2025, LAMMPS = 4 Feb 2025 367s restoring atom style atomic from restart 367s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 367s 1 by 1 by 2 MPI processor grid 367s restoring pair style lj/cubic from restart 367s 1000 atoms 367s read_restart CPU = 0.001 seconds 367s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 367s Neighbor list info ... 367s update: every = 1 steps, delay = 0 steps, check = yes 367s max neighbors/atom: 2000, page size: 100000 367s master list distance cutoff = 1.7475372 367s ghost atom cutoff = 1.7475372 367s binsize = 0.87376862, bins = 8 12 12 367s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 367s (1) pair lj/cubic, perpetual 367s attributes: half, newton on 367s pair build: half/bin/atomonly/newton 367s stencil: half/bin/3d 367s bin: standard 367s Setting up Verlet run ... 367s Unit style : lj 367s Current step : 0 367s Time step : 0.001 367s Per MPI rank memory allocation (min/avg/max) = 2.799 | 2.799 | 2.799 Mbytes 367s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 367s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355674 -0.00025875943 9.8684199 0 -0.004855272 2.3793218 0.0041072261 367s 1000 0.0081680995 0.012239897 -5.502183 -838.86998 35.611847 14.887133 8.9677725 -0.83338004 0.093826643 16.159657 1.5001702 368s 2000 0.019411571 0.02908824 -5.2936173 -1019.8648 41.786268 17.574468 8.8958707 -1.0146003 0.11822851 16.856679 1.6874844 368s 3000 0.047493358 0.071168797 -5.3442104 -973.41424 39.063178 16.131155 8.932271 -0.9681412 0.073773934 16.606449 1.6012863 368s 4000 0.11967749 0.17933672 -5.2091216 -1305.4423 40.847348 16.439268 8.9207902 -1.3004125 0.017533293 16.880106 1.647278 369s 5000 0.1321076 0.19796323 -5.2602273 -1221.8186 39.035827 15.56534 8.9413169 -1.2167564 -0.00091184948 16.679969 1.5931121 369s 6000 0.14696328 0.22022448 -5.1837201 -1395.6748 40.850308 16.268271 8.9221523 -1.3907113 -0.0051917075 16.892648 1.6461742 369s 7000 0.12077248 0.18097755 -5.2583118 -1181.0031 39.190631 15.648852 8.9380865 -1.1759258 0.0072501862 16.684492 1.5989963 370s 8000 0.14329465 0.21472703 -5.1714516 -1352.4587 40.863939 16.196848 8.9218327 -1.347502 -0.0071500832 16.892664 1.646722 370s 9000 0.12213842 0.18302442 -5.259117 -1191.6806 39.213345 15.658699 8.9368295 -1.1866045 0.0076494093 16.678266 1.6005204 370s 10000 0.1480674 0.221879 -5.1796888 -1362.5622 40.676046 16.107317 8.9229551 -1.3576044 -0.0093926147 16.863607 1.6419747 370s Loop time of 3.26369 on 2 procs for 10000 steps with 1000 atoms 370s 370s Performance: 264731.201 tau/day, 3064.019 timesteps/s, 3.064 Matom-step/s 370s 98.6% CPU use with 2 MPI tasks x 1 OpenMP threads 370s 370s MPI task timing breakdown: 370s Section | min time | avg time | max time |%varavg| %total 370s --------------------------------------------------------------- 370s Pair | 1.9648 | 1.9911 | 2.0174 | 1.9 | 61.01 370s Neigh | 0.04051 | 0.04068 | 0.040849 | 0.1 | 1.25 370s Comm | 0.41984 | 0.44527 | 0.4707 | 3.8 | 13.64 370s Output | 0.0012075 | 0.0012711 | 0.0013348 | 0.2 | 0.04 370s Modify | 0.69572 | 0.69847 | 0.70121 | 0.3 | 21.40 370s Other | | 0.08689 | | | 2.66 370s 370s Nlocal: 500 ave 503 max 497 min 370s Histogram: 1 0 0 0 0 0 0 0 0 1 370s Nghost: 1217.5 ave 1219 max 1216 min 370s Histogram: 1 0 0 0 0 0 0 0 0 1 370s Neighs: 10291 ave 10353 max 10229 min 370s Histogram: 1 0 0 0 0 0 0 0 0 1 370s 370s Total # of neighbors = 20582 370s Ave neighs/atom = 20.582 370s Neighbor list builds = 89 370s Dangerous builds = 0 370s Total wall time: 0:00:10 370s LAMMPS (4 Feb 2025) 370s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 370s using 1 OpenMP thread(s) per MPI task 370s Lattice spacing in x,y,z = 1.4142135 2 2 370s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 370s 1 by 1 by 1 MPI processor grid 370s Created 1000 atoms 370s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 370s create_atoms CPU = 0.000 seconds 370s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 370s Neighbor list info ... 370s update: every = 1 steps, delay = 0 steps, check = yes 370s max neighbors/atom: 2000, page size: 100000 370s master list distance cutoff = 1.8475372 370s ghost atom cutoff = 1.8475372 370s binsize = 0.92376862, bins = 8 11 11 370s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 370s (1) pair lj/cubic, perpetual 370s attributes: half, newton on 370s pair build: half/bin/atomonly/newton 370s stencil: half/bin/3d 370s bin: standard 370s Setting up cg style minimization ... 370s Unit style : lj 370s Current step : 0 370s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 370s (src/min.cpp:219) 370s Per MPI rank memory allocation (min/avg/max) = 3.934 | 3.934 | 3.934 Mbytes 370s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 370s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 370s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 370s 134 0 -6.3344253 -6.3344253 -4.3330648e-13 -4.7530261e-13 -4.7130069e-13 6.9780267 9.8684199 9.8684199 370s Loop time of 0.0609686 on 1 procs for 134 steps with 1000 atoms 370s 370s 98.3% CPU use with 1 MPI tasks x 1 OpenMP threads 370s 370s Minimization stats: 370s Stopping criterion = force tolerance 370s Energy initial, next-to-last, final = 370s -6.29375358358557 -6.33442531515503 -6.33442531515503 370s Force two-norm initial, final = 3395.2895 5.5740327e-10 370s Force max component initial, final = 1960.2713 3.2730334e-10 370s Final line search alpha, max atom move = 1 3.2730334e-10 370s Iterations, force evaluations = 134 137 370s 370s MPI task timing breakdown: 370s Section | min time | avg time | max time |%varavg| %total 370s --------------------------------------------------------------- 370s Pair | 0.04726 | 0.04726 | 0.04726 | 0.0 | 77.52 370s Neigh | 0.00081605 | 0.00081605 | 0.00081605 | 0.0 | 1.34 370s Comm | 0.0014112 | 0.0014112 | 0.0014112 | 0.0 | 2.31 370s Output | 7.7721e-05 | 7.7721e-05 | 7.7721e-05 | 0.0 | 0.13 370s Modify | 0 | 0 | 0 | 0.0 | 0.00 370s Other | | 0.0114 | | | 18.70 370s 370s Nlocal: 1000 ave 1000 max 1000 min 370s Histogram: 1 0 0 0 0 0 0 0 0 0 370s Nghost: 1724 ave 1724 max 1724 min 370s Histogram: 1 0 0 0 0 0 0 0 0 0 370s Neighs: 21000 ave 21000 max 21000 min 370s Histogram: 1 0 0 0 0 0 0 0 0 0 370s 370s Total # of neighbors = 21000 370s Ave neighs/atom = 21 370s Neighbor list builds = 1 370s Dangerous builds = 0 370s System init for write_restart ... 370s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 370s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 370s using 1 OpenMP thread(s) per MPI task 370s Reading restart file ... 370s restart file = 4 Feb 2025, LAMMPS = 4 Feb 2025 370s restoring atom style atomic from restart 370s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 370s 1 by 1 by 1 MPI processor grid 370s restoring pair style lj/cubic from restart 370s 1000 atoms 370s read_restart CPU = 0.001 seconds 370s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 370s Neighbor list info ... 370s update: every = 1 steps, delay = 0 steps, check = yes 370s max neighbors/atom: 2000, page size: 100000 370s master list distance cutoff = 1.7475372 370s ghost atom cutoff = 1.7475372 370s binsize = 0.87376862, bins = 8 12 12 370s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 370s (1) pair lj/cubic, perpetual 370s attributes: half, newton on 370s pair build: half/bin/atomonly/newton 370s stencil: half/bin/3d 370s bin: standard 370s Setting up Verlet run ... 370s Unit style : lj 370s Current step : 0 370s Time step : 0.001 370s Per MPI rank memory allocation (min/avg/max) = 2.811 | 2.811 | 2.811 Mbytes 370s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 370s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 371s 1000 0.0093381492 0.013993217 -2.1704431 -4183.8284 129.15284 58.544409 8.3142517 -4.1816719 0.93744212 23.519052 3.7381985 371s 2000 0.24794859 0.37155095 -5.8915826 -528.38691 8.3849811 1.3744297 9.5938806 -0.52286688 -0.24350394 13.910493 0.41033425 372s 3000 0.3892042 0.5832225 -3.7686896 -3442.3257 72.742382 28.486576 8.6238082 -3.4391402 0.0038227739 19.697354 2.5139569 373s 4000 0.67010303 1.0041494 -4.2080956 -2935.8105 35.596234 3.9346859 8.7508489 -2.9326065 -0.58038927 14.529876 1.6677093 373s 5000 0.41845028 0.62704774 -4.8392822 -1894.6664 30.624319 4.6370699 8.7827304 -1.8904542 -0.31998377 13.670423 1.5249748 374s 6000 0.22409652 0.33580864 -3.7653422 -2666.4156 50.804071 7.220865 8.25496 -2.6629861 -0.017448126 14.48017 2.3883779 374s 7000 0.094832866 0.14210705 -4.5432169 -2337.0271 35.853414 3.4750842 8.4475655 -2.332626 -0.052659776 12.95347 1.8841809 375s 8000 0.043338745 0.06494311 -4.6249403 -1687.4892 39.679004 6.7256868 8.4321684 -1.6829292 0.070571417 13.554654 1.9927395 375s 9000 0.018233343 0.027322664 -4.425909 -1916.4941 41.680023 5.9079935 8.3470382 -1.9120955 0.090887676 13.502397 2.1013348 376s 10000 0.0082616415 0.01238007 -4.6221264 -1723.6542 39.842157 6.5678795 8.41093 -1.7190444 0.099616538 13.484322 2.0113699 376s Loop time of 5.45914 on 1 procs for 10000 steps with 1000 atoms 376s 376s Performance: 158266.685 tau/day, 1831.790 timesteps/s, 1.832 Matom-step/s 376s 99.1% CPU use with 1 MPI tasks x 1 OpenMP threads 376s 376s MPI task timing breakdown: 376s Section | min time | avg time | max time |%varavg| %total 376s --------------------------------------------------------------- 376s Pair | 4.3827 | 4.3827 | 4.3827 | 0.0 | 80.28 376s Neigh | 0.16696 | 0.16696 | 0.16696 | 0.0 | 3.06 376s Comm | 0.11861 | 0.11861 | 0.11861 | 0.0 | 2.17 376s Output | 0.0011649 | 0.0011649 | 0.0011649 | 0.0 | 0.02 376s Modify | 0.70214 | 0.70214 | 0.70214 | 0.0 | 12.86 376s Other | | 0.08757 | | | 1.60 376s 376s Nlocal: 1000 ave 1000 max 1000 min 376s Histogram: 1 0 0 0 0 0 0 0 0 0 376s Nghost: 1886 ave 1886 max 1886 min 376s Histogram: 1 0 0 0 0 0 0 0 0 0 376s Neighs: 20874 ave 20874 max 20874 min 376s Histogram: 1 0 0 0 0 0 0 0 0 0 376s 376s Total # of neighbors = 20874 376s Ave neighs/atom = 20.874 376s Neighbor list builds = 188 376s Dangerous builds = 0 376s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 376s using 1 OpenMP thread(s) per MPI task 376s Reading restart file ... 376s restart file = 4 Feb 2025, LAMMPS = 4 Feb 2025 376s restoring atom style atomic from restart 376s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 376s 1 by 1 by 1 MPI processor grid 376s restoring pair style lj/cubic from restart 376s 1000 atoms 376s read_restart CPU = 0.000 seconds 376s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 376s Neighbor list info ... 376s update: every = 1 steps, delay = 0 steps, check = yes 376s max neighbors/atom: 2000, page size: 100000 376s master list distance cutoff = 1.7475372 376s ghost atom cutoff = 1.7475372 376s binsize = 0.87376862, bins = 8 12 12 376s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 376s (1) pair lj/cubic, perpetual 376s attributes: half, newton on 376s pair build: half/bin/atomonly/newton 376s stencil: half/bin/3d 376s bin: standard 376s Setting up Verlet run ... 376s Unit style : lj 376s Current step : 0 376s Time step : 0.001 376s Per MPI rank memory allocation (min/avg/max) = 2.811 | 2.811 | 2.811 Mbytes 376s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 376s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 376s 1000 0.0062572988 0.0093765623 -5.989087 -1670.9191 18.918118 7.5844401 9.2338165 -1.6649394 0.023419337 13.976997 0.92138738 377s 2000 0.0068451081 0.010257394 -5.456581 -2537.81 37.064253 15.537266 8.9496405 -2.5323637 0.10230605 16.325406 1.5455016 377s 3000 0.0073276099 0.010980423 -5.3663421 -2643.8751 39.907292 16.807489 8.9154852 -2.6385198 0.11818116 16.63905 1.6326832 378s 4000 0.0069296906 0.010384141 -5.36234 -2655.7228 40.010742 16.851482 8.9144328 -2.6503709 0.11868137 16.651571 1.6356847 378s 5000 0.0076142461 0.011409948 -5.3631443 -2664.4499 39.997648 16.846756 8.9145416 -2.6590982 0.1184114 16.649779 1.6353254 379s 6000 0.0077053831 0.011546517 -5.3628538 -2673.2444 39.991598 16.840314 8.9145803 -2.667893 0.11818361 16.648852 1.6351691 379s 7000 0.0077405663 0.011599239 -5.3623531 -2682.1589 40.000448 16.844009 8.9145774 -2.6768081 0.11809899 16.650669 1.6353525 380s 8000 0.0080673569 0.012088934 -5.3623755 -2691.0104 39.995327 16.840134 8.9146099 -2.6856601 0.11787103 16.649882 1.6352204 380s 9000 0.0083223083 0.012470979 -5.3622988 -2699.8929 40.00571 16.847764 8.9146503 -2.6945431 0.11781523 16.652389 1.6353987 381s 10000 0.0091249116 0.01367368 -5.3630138 -2708.966 39.987197 16.837314 8.9146848 -2.7036167 0.11743014 16.648832 1.6349911 381s Loop time of 4.82492 on 1 procs for 10000 steps with 1000 atoms 381s 381s Performance: 179070.501 tau/day, 2072.575 timesteps/s, 2.073 Matom-step/s 381s 98.8% CPU use with 1 MPI tasks x 1 OpenMP threads 381s 381s MPI task timing breakdown: 381s Section | min time | avg time | max time |%varavg| %total 381s --------------------------------------------------------------- 381s Pair | 3.9325 | 3.9325 | 3.9325 | 0.0 | 81.50 381s Neigh | 0.0096859 | 0.0096859 | 0.0096859 | 0.0 | 0.20 381s Comm | 0.097247 | 0.097247 | 0.097247 | 0.0 | 2.02 381s Output | 0.0011359 | 0.0011359 | 0.0011359 | 0.0 | 0.02 381s Modify | 0.7 | 0.7 | 0.7 | 0.0 | 14.51 381s Other | | 0.08431 | | | 1.75 381s 381s Nlocal: 1000 ave 1000 max 1000 min 381s Histogram: 1 0 0 0 0 0 0 0 0 0 381s Nghost: 1724 ave 1724 max 1724 min 381s Histogram: 1 0 0 0 0 0 0 0 0 0 381s Neighs: 21000 ave 21000 max 21000 min 381s Histogram: 1 0 0 0 0 0 0 0 0 0 381s 381s Total # of neighbors = 21000 381s Ave neighs/atom = 21 381s Neighbor list builds = 11 381s Dangerous builds = 0 381s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 381s using 1 OpenMP thread(s) per MPI task 381s Reading restart file ... 381s restart file = 4 Feb 2025, LAMMPS = 4 Feb 2025 381s restoring atom style atomic from restart 381s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 381s 1 by 1 by 1 MPI processor grid 381s restoring pair style lj/cubic from restart 381s 1000 atoms 381s read_restart CPU = 0.000 seconds 381s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 381s Neighbor list info ... 381s update: every = 1 steps, delay = 0 steps, check = yes 381s max neighbors/atom: 2000, page size: 100000 381s master list distance cutoff = 1.7475372 381s ghost atom cutoff = 1.7475372 381s binsize = 0.87376862, bins = 8 12 12 381s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 381s (1) pair lj/cubic, perpetual 381s attributes: half, newton on 381s pair build: half/bin/atomonly/newton 381s stencil: half/bin/3d 381s bin: standard 381s Setting up Verlet run ... 381s Unit style : lj 381s Current step : 0 381s Time step : 0.001 381s Per MPI rank memory allocation (min/avg/max) = 2.811 | 2.811 | 2.811 Mbytes 381s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 381s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 381s 1000 0.0083300318 0.012482553 -5.5023183 -838.99233 35.610078 14.886668 8.9677982 -0.83350249 0.093761717 16.159482 1.500112 382s 2000 0.020386436 0.030549075 -5.294934 -1021.4347 41.760404 17.563313 8.8960328 -1.0161703 0.1178086 16.852842 1.6868239 382s 3000 0.049693082 0.074465084 -5.3469418 -982.1922 39.030412 16.123502 8.9325589 -0.97691972 0.073097533 16.601991 1.6003728 383s 4000 0.11859524 0.17771497 -5.207074 -1299.948 40.941639 16.507821 8.9213137 -1.2949186 0.018189971 16.904165 1.6487306 383s 5000 0.130146 0.19502378 -5.261025 -1208.3405 39.059595 15.609328 8.9431689 -1.2032745 -0.00023811036 16.701434 1.5920334 384s 6000 0.13812959 0.20698719 -5.1710048 -1334.1421 40.904888 16.242199 8.9222846 -1.329178 -0.0044756362 16.90509 1.6471606 384s 7000 0.12107441 0.18143001 -5.2602562 -1170.0585 39.060849 15.577606 8.9397535 -1.1649797 0.005587398 16.671517 1.5949415 385s 8000 0.14333426 0.21478639 -5.1717109 -1352.635 40.876285 16.205871 8.9218128 -1.3476781 -0.0069373292 16.895041 1.6469877 385s 9000 0.12159783 0.18221435 -5.2591928 -1186.8604 39.22852 15.6778 8.9376658 -1.1817834 0.0077335044 16.68885 1.6001243 386s 10000 0.15321647 0.22959488 -5.188176 -1391.2245 40.666599 16.146259 8.9228489 -1.3862659 -0.0091900905 16.860718 1.6418747 386s Loop time of 5.02755 on 1 procs for 10000 steps with 1000 atoms 386s 386s Performance: 171852.995 tau/day, 1989.039 timesteps/s, 1.989 Matom-step/s 386s 99.1% CPU use with 1 MPI tasks x 1 OpenMP threads 386s 386s MPI task timing breakdown: 386s Section | min time | avg time | max time |%varavg| %total 386s --------------------------------------------------------------- 386s Pair | 4.0086 | 4.0086 | 4.0086 | 0.0 | 79.73 386s Neigh | 0.085699 | 0.085699 | 0.085699 | 0.0 | 1.70 386s Comm | 0.10578 | 0.10578 | 0.10578 | 0.0 | 2.10 386s Output | 0.0011381 | 0.0011381 | 0.0011381 | 0.0 | 0.02 386s Modify | 0.73648 | 0.73648 | 0.73648 | 0.0 | 14.65 386s Other | | 0.08981 | | | 1.79 386s 386s Nlocal: 1000 ave 1000 max 1000 min 386s Histogram: 1 0 0 0 0 0 0 0 0 0 386s Nghost: 1724 ave 1724 max 1724 min 386s Histogram: 1 0 0 0 0 0 0 0 0 0 386s Neighs: 20654 ave 20654 max 20654 min 386s Histogram: 1 0 0 0 0 0 0 0 0 0 386s 386s Total # of neighbors = 20654 386s Ave neighs/atom = 20.654 386s Neighbor list builds = 94 386s Dangerous builds = 0 386s Total wall time: 0:00:15 386s run: OK 386s autopkgtest [21:19:03]: test hugo: -----------------------] 390s hugo PASS 390s autopkgtest [21:19:07]: test hugo: - - - - - - - - - - results - - - - - - - - - - 393s autopkgtest [21:19:10]: test command1: preparing testbed 416s autopkgtest [21:19:33]: testbed dpkg architecture: armhf 418s autopkgtest [21:19:35]: testbed apt version: 3.1.6ubuntu2 422s autopkgtest [21:19:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 424s autopkgtest [21:19:41]: testbed release detected to be: resolute 431s autopkgtest [21:19:48]: updating testbed package index (apt update) 433s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 433s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [83.3 kB] 433s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 433s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 433s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [18.2 kB] 433s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 433s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [431 kB] 433s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [54.3 kB] 434s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [89.6 kB] 434s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted armhf Packages [940 B] 434s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [307 kB] 434s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [3680 B] 434s Get:13 http://ftpmaster.internal/ubuntu resolute/main Sources [1408 kB] 434s Get:14 http://ftpmaster.internal/ubuntu resolute/restricted Sources [14.4 kB] 434s Get:15 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.1 MB] 434s Get:16 http://ftpmaster.internal/ubuntu resolute/multiverse Sources [307 kB] 434s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1357 kB] 435s Get:18 http://ftpmaster.internal/ubuntu resolute/restricted armhf Packages [1672 B] 435s Get:19 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [14.7 MB] 435s Get:20 http://ftpmaster.internal/ubuntu resolute/multiverse armhf Packages [182 kB] 438s Fetched 40.2 MB in 5s (7826 kB/s) 439s Reading package lists... 445s autopkgtest [21:20:02]: upgrading testbed (apt dist-upgrade and autopurge) 447s Reading package lists... 447s Building dependency tree... 447s Reading state information... 447s Calculating upgrade... 448s The following packages will be upgraded: 448s apparmor apt base-files binutils binutils-arm-linux-gnueabihf 448s binutils-common cloud-init cloud-init-base distro-info-data gcc-15-base 448s gir1.2-girepository-2.0 libapparmor1 libapt-pkg7.0 libatomic1 libbinutils 448s libctf-nobfd0 libctf0 libgcc-s1 libgirepository-1.0-1 libpython3-stdlib 448s libsframe2 libstdc++6 lto-disabled-list python3 python3-minimal sudo-rs 448s 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 448s Need to get 7366 kB of archives. 448s After this operation, 14.3 kB of additional disk space will be used. 448s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf base-files armhf 14ubuntu4 [75.4 kB] 448s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libatomic1 armhf 15.2.0-5ubuntu1 [7942 B] 448s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-15-base armhf 15.2.0-5ubuntu1 [58.1 kB] 448s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libgcc-s1 armhf 15.2.0-5ubuntu1 [40.6 kB] 449s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libstdc++6 armhf 15.2.0-5ubuntu1 [731 kB] 449s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libapt-pkg7.0 armhf 3.1.8ubuntu1 [1148 kB] 449s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf apt armhf 3.1.8ubuntu1 [1404 kB] 449s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-minimal armhf 3.13.7-2 [27.8 kB] 449s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3 armhf 3.13.7-2 [23.9 kB] 449s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libpython3-stdlib armhf 3.13.7-2 [10.6 kB] 449s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf distro-info-data all 0.67~ubuntu1 [7004 B] 449s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf libgirepository-1.0-1 armhf 1.86.0-6 [111 kB] 449s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf gir1.2-girepository-2.0 armhf 1.86.0-6 [25.3 kB] 449s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf libapparmor1 armhf 5.0.0~alpha1-0ubuntu8.1 [52.9 kB] 449s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf sudo-rs armhf 0.2.8-1ubuntu5.1 [548 kB] 449s Get:16 http://ftpmaster.internal/ubuntu resolute/main armhf apparmor armhf 5.0.0~alpha1-0ubuntu8.1 [631 kB] 449s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libctf0 armhf 2.45-7ubuntu2 [75.7 kB] 449s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libctf-nobfd0 armhf 2.45-7ubuntu2 [79.1 kB] 449s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-arm-linux-gnueabihf armhf 2.45-7ubuntu2 [1022 kB] 449s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libbinutils armhf 2.45-7ubuntu2 [411 kB] 449s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf binutils armhf 2.45-7ubuntu2 [3240 B] 449s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-common armhf 2.45-7ubuntu2 [220 kB] 449s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libsframe2 armhf 2.45-7ubuntu2 [13.4 kB] 449s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init-base all 25.3-0ubuntu1 [625 kB] 449s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init all 25.3-0ubuntu1 [2106 B] 449s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf lto-disabled-list all 71 [12.5 kB] 450s Preconfiguring packages ... 450s Fetched 7366 kB in 1s (5524 kB/s) 450s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 450s Preparing to unpack .../base-files_14ubuntu4_armhf.deb ... 450s Unpacking base-files (14ubuntu4) over (14ubuntu3) ... 450s Setting up base-files (14ubuntu4) ... 450s Installing new version of config file /etc/issue ... 450s Installing new version of config file /etc/issue.net ... 450s Installing new version of config file /etc/lsb-release ... 451s motd-news.service is a disabled or a static unit not running, not starting it. 451s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 451s Preparing to unpack .../libatomic1_15.2.0-5ubuntu1_armhf.deb ... 451s Unpacking libatomic1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 451s Preparing to unpack .../gcc-15-base_15.2.0-5ubuntu1_armhf.deb ... 451s Unpacking gcc-15-base:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 451s Setting up gcc-15-base:armhf (15.2.0-5ubuntu1) ... 451s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 451s Preparing to unpack .../libgcc-s1_15.2.0-5ubuntu1_armhf.deb ... 451s Unpacking libgcc-s1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 451s Setting up libgcc-s1:armhf (15.2.0-5ubuntu1) ... 451s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 451s Preparing to unpack .../libstdc++6_15.2.0-5ubuntu1_armhf.deb ... 451s Unpacking libstdc++6:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 451s Setting up libstdc++6:armhf (15.2.0-5ubuntu1) ... 452s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 452s Preparing to unpack .../libapt-pkg7.0_3.1.8ubuntu1_armhf.deb ... 452s Unpacking libapt-pkg7.0:armhf (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 452s Setting up libapt-pkg7.0:armhf (3.1.8ubuntu1) ... 452s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 452s Preparing to unpack .../apt_3.1.8ubuntu1_armhf.deb ... 452s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 452s Setting up apt (3.1.8ubuntu1) ... 453s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 453s Preparing to unpack .../python3-minimal_3.13.7-2_armhf.deb ... 453s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 453s Setting up python3-minimal (3.13.7-2) ... 453s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 453s Preparing to unpack .../00-python3_3.13.7-2_armhf.deb ... 453s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 453s Preparing to unpack .../01-libpython3-stdlib_3.13.7-2_armhf.deb ... 453s Unpacking libpython3-stdlib:armhf (3.13.7-2) over (3.13.7-1) ... 453s Preparing to unpack .../02-distro-info-data_0.67~ubuntu1_all.deb ... 453s Unpacking distro-info-data (0.67~ubuntu1) over (0.66) ... 453s Preparing to unpack .../03-libgirepository-1.0-1_1.86.0-6_armhf.deb ... 453s Unpacking libgirepository-1.0-1:armhf (1.86.0-6) over (1.84.0-1) ... 453s Preparing to unpack .../04-gir1.2-girepository-2.0_1.86.0-6_armhf.deb ... 453s Unpacking gir1.2-girepository-2.0:armhf (1.86.0-6) over (1.84.0-1) ... 453s Preparing to unpack .../05-libapparmor1_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 453s Unpacking libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 453s Preparing to unpack .../06-sudo-rs_0.2.8-1ubuntu5.1_armhf.deb ... 453s Unpacking sudo-rs (0.2.8-1ubuntu5.1) over (0.2.8-1ubuntu5) ... 453s Preparing to unpack .../07-apparmor_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 454s Unpacking apparmor (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 455s Preparing to unpack .../08-libctf0_2.45-7ubuntu2_armhf.deb ... 455s Unpacking libctf0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 455s Preparing to unpack .../09-libctf-nobfd0_2.45-7ubuntu2_armhf.deb ... 455s Unpacking libctf-nobfd0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 455s Preparing to unpack .../10-binutils-arm-linux-gnueabihf_2.45-7ubuntu2_armhf.deb ... 455s Unpacking binutils-arm-linux-gnueabihf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 455s Preparing to unpack .../11-libbinutils_2.45-7ubuntu2_armhf.deb ... 455s Unpacking libbinutils:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 455s Preparing to unpack .../12-binutils_2.45-7ubuntu2_armhf.deb ... 455s Unpacking binutils (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 455s Preparing to unpack .../13-binutils-common_2.45-7ubuntu2_armhf.deb ... 455s Unpacking binutils-common:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 455s Preparing to unpack .../14-libsframe2_2.45-7ubuntu2_armhf.deb ... 455s Unpacking libsframe2:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 455s Preparing to unpack .../15-cloud-init-base_25.3-0ubuntu1_all.deb ... 456s Unpacking cloud-init-base (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 456s Preparing to unpack .../16-cloud-init_25.3-0ubuntu1_all.deb ... 456s Unpacking cloud-init (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 456s Preparing to unpack .../17-lto-disabled-list_71_all.deb ... 456s Unpacking lto-disabled-list (71) over (69) ... 456s Setting up lto-disabled-list (71) ... 456s Setting up libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) ... 456s Setting up distro-info-data (0.67~ubuntu1) ... 456s Setting up libsframe2:armhf (2.45-7ubuntu2) ... 456s Setting up binutils-common:armhf (2.45-7ubuntu2) ... 456s Setting up libctf-nobfd0:armhf (2.45-7ubuntu2) ... 456s Setting up apparmor (5.0.0~alpha1-0ubuntu8.1) ... 456s Installing new version of config file /etc/apparmor.d/fusermount3 ... 456s apparmor_parser: Unable to replace "lsb_release". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 456s 456s apparmor_parser: Unable to replace "kmod". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 456s 456s apparmor_parser: Unable to replace "nvidia_modprobe". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 456s 458s Reloading AppArmor profiles 458s /sbin/apparmor_parser: Unable to replace "1password". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "Discord". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "MongoDB Compass". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "balena-etcher". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "brave". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "buildah". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "cam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "bwrap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ch-checkns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ch-run". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "chrome". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "chromium". /sbin/apparmor_parser: Unable to replace "vscode". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "babeld". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "crun". /sbin/apparmor_parser: Unable to replace "devhelp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "bfdd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "element-desktop". /sbin/apparmor_parser: Unable to replace "bgpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "alsamixer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "evolution". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "epiphany". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "firefox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "flatpak". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "foliate". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "geary". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "github-desktop". /sbin/apparmor_parser: Unable to replace "goldendict". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "eigrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "dnstracer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "fabricd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "hostname". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "dig". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "iotop-c". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "kchmviewer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "keybase". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "fusermount3". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lc-compliance". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "libcamerify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "isisd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "john". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "linux-sandbox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ipa_verify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "loupe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "Xorg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ldpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lxc-attach". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "gs". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lxc-create". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lxc-execute". /sbin/apparmor_parser: Unable to replace "lxc-destroy". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lxc-stop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lxc-unshare". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lsblk". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "mmdebstrap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lxc-usernsexec". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "compressor". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "locale". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "msedge". /sbin/apparmor_parser: Unable to replace "linux-boot-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lsusb". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "lsb_release". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "notepadqq". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "irssi". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "obsidian". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "mosquitto". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "mbsync". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "opera". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "opam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "nhrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "notify-send". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "nslookup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "nc.openbsd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "pageedit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "kmod". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "nvidia_modprobe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ospf6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "pathd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ospfd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "podman". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "polypane". /sbin/apparmor_parser: Unable to replace "os-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "privacybrowser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "pim6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "qcam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "pbrd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "qmapshack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "pimd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "qutebrowser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "plasmashell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "rpm". /sbin/apparmor_parser: Unable to replace "rootlesskit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "rssguard". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "runc". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild". /sbin/apparmor_parser: Unable to replace "sbuild-abort". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "qpdf". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ripd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ripngd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-adduser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-apt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-checkpackages". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-clean". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-createchroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-destroychroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-distupgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-shell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-unhold". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-hold". /sbin/apparmor_parser: Unable to replace "sbuild-update". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "sbuild-upgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "signal-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "scide". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "slack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "slirp4netns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "steam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "stress-ng". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "surfshark". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "systemd-coredump". /sbin/apparmor_parser: Unable to replace "thunderbird". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "openvpn". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "proftpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "trinity". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ssh-keyscan". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "staticd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "tup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "tinyproxy". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "tuxedo-control-center". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "systemd-detect-virt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "unprivileged_userns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "userbindmount". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "unix-chkpwd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "mx-extract". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "rygel". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "/usr/bin/man". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_apt_news". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "uwsgi-core". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "vdens". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "cmds". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "tnftp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "virtiofsd". /sbin/apparmor_parser: Unable to replace "vivaldi-bin". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "vpnns". /sbin/apparmor_parser: Unable to replace "rsyslogd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "/usr/sbin/chronyd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "dumpcap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "tshark". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "wike". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "wpcom". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "wg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "vrrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "who". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "wg-quick". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "znc". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "tcpdump". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "apt_methods". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_esm_cache". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s /sbin/apparmor_parser: Unable to replace "transmission-cli". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 458s 458s Error: At least one profile failed to load 458s Setting up libatomic1:armhf (15.2.0-5ubuntu1) ... 458s Setting up libgirepository-1.0-1:armhf (1.86.0-6) ... 458s Setting up libbinutils:armhf (2.45-7ubuntu2) ... 458s Setting up sudo-rs (0.2.8-1ubuntu5.1) ... 458s Setting up libpython3-stdlib:armhf (3.13.7-2) ... 458s Setting up libctf0:armhf (2.45-7ubuntu2) ... 458s Setting up python3 (3.13.7-2) ... 458s Setting up cloud-init-base (25.3-0ubuntu1) ... 460s Setting up gir1.2-girepository-2.0:armhf (1.86.0-6) ... 460s Setting up binutils-arm-linux-gnueabihf (2.45-7ubuntu2) ... 460s Setting up cloud-init (25.3-0ubuntu1) ... 460s Setting up binutils (2.45-7ubuntu2) ... 460s Processing triggers for plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu1) ... 460s Processing triggers for procps (2:4.0.4-8ubuntu3) ... 460s Processing triggers for install-info (7.1.1-1ubuntu1) ... 460s Processing triggers for libc-bin (2.42-0ubuntu3) ... 461s Processing triggers for rsyslog (8.2504.0-1ubuntu2) ... 461s Processing triggers for systemd (257.9-0ubuntu2) ... 461s Processing triggers for man-db (2.13.1-1) ... 465s Reading package lists... 466s Building dependency tree... 466s Reading state information... 466s Solving dependencies... 467s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 469s autopkgtest [21:20:26]: rebooting testbed after setup commands that affected boot 533s Reading package lists... 533s Building dependency tree... 533s Reading state information... 533s Solving dependencies... 534s The following NEW packages will be installed: 534s autoconf automake autotools-dev cpp cpp-15 cpp-15-arm-linux-gnueabihf 534s cpp-arm-linux-gnueabihf fontconfig-config fonts-dejavu-core 534s fonts-dejavu-mono g++ g++-15 g++-15-arm-linux-gnueabihf 534s g++-arm-linux-gnueabihf gcc gcc-15 gcc-15-arm-linux-gnueabihf 534s gcc-arm-linux-gnueabihf gfortran-15 gfortran-15-arm-linux-gnueabihf 534s hwloc-nox libaec0 libasan8 libblas3 libc-dev-bin libc6-dev libcairo2 534s libcc1-0 libcrypt-dev libcurl3t64-gnutls libdeflate0 libdouble-conversion3 534s libdrm-amdgpu1 libfftw3-double3 libfontconfig1 libfreetype6 libgbm1 534s libgcc-15-dev libgfortran-15-dev libgfortran5 libgl1 libgl1-mesa-dri 534s libgl2ps1.4 libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-310 534s libhdf5-hl-310 libhwloc-dev libhwloc15 libisl23 libjbig0 libjpeg-turbo8 534s libjpeg8 libjsoncpp26 libkim-api2 liblammps-dev liblammps0t64 liblapack3 534s liblerc4 libllvm20 libltdl-dev libltdl7 libmpc3 libmpich-dev libmpich12 534s libnetcdf22 libnuma-dev libogg0 libopengl0 libpixman-1-0 libproj25 534s libpython3.13 libsharpyuv0 libslurm42t64 libstdc++-15-dev libsz2 libtbb12 534s libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtheoradec1 libtheoraenc1 libtiff6 534s libtk8.6 libubsan1 libvoro++1 libvtk9.3 libvulkan1 libwebp7 libx11-xcb1 534s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 534s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxft2 libxrender1 libxshmfence1 534s libxss1 libxxf86vm1 linux-libc-dev m4 mesa-libgallium mpi-default-bin 534s mpi-default-dev mpich proj-data python3-lammps rpcsvc-proto x11-common 534s 0 upgraded, 116 newly installed, 0 to remove and 0 not upgraded. 534s Need to get 163 MB of archives. 534s After this operation, 549 MB of additional disk space will be used. 534s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf m4 armhf 1.4.19-8 [238 kB] 535s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf autoconf all 2.72-3.1ubuntu1 [384 kB] 535s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf autotools-dev all 20240727.1 [43.4 kB] 535s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf automake all 1:1.17-4ubuntu1 [572 kB] 536s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libisl23 armhf 0.27-1 [546 kB] 536s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libmpc3 armhf 1.3.1-1build3 [47.2 kB] 536s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf cpp-15-arm-linux-gnueabihf armhf 15.2.0-5ubuntu1 [10.1 MB] 540s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf cpp-15 armhf 15.2.0-5ubuntu1 [1034 B] 540s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf cpp-arm-linux-gnueabihf armhf 4:15.2.0-4ubuntu1 [5756 B] 540s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf cpp armhf 4:15.2.0-4ubuntu1 [22.4 kB] 540s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 540s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 540s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf fontconfig-config armhf 2.15.0-2.3ubuntu1 [38.1 kB] 540s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf libcc1-0 armhf 15.2.0-5ubuntu1 [43.6 kB] 540s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf libgomp1 armhf 15.2.0-5ubuntu1 [129 kB] 540s Get:16 http://ftpmaster.internal/ubuntu resolute/main armhf libasan8 armhf 15.2.0-5ubuntu1 [2952 kB] 540s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libubsan1 armhf 15.2.0-5ubuntu1 [1187 kB] 540s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libgcc-15-dev armhf 15.2.0-5ubuntu1 [898 kB] 541s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-15-arm-linux-gnueabihf armhf 15.2.0-5ubuntu1 [19.5 MB] 542s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-15 armhf 15.2.0-5ubuntu1 [492 kB] 542s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-arm-linux-gnueabihf armhf 4:15.2.0-4ubuntu1 [1220 B] 542s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf gcc armhf 4:15.2.0-4ubuntu1 [5022 B] 542s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libc-dev-bin armhf 2.42-0ubuntu3 [21.8 kB] 542s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf linux-libc-dev armhf 6.17.0-5.5 [1771 kB] 542s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf libcrypt-dev armhf 1:4.4.38-1build1 [120 kB] 542s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf rpcsvc-proto armhf 1.4.3-1 [62.3 kB] 542s Get:27 http://ftpmaster.internal/ubuntu resolute/main armhf libc6-dev armhf 2.42-0ubuntu3 [1416 kB] 542s Get:28 http://ftpmaster.internal/ubuntu resolute/main armhf libstdc++-15-dev armhf 15.2.0-5ubuntu1 [2635 kB] 542s Get:29 http://ftpmaster.internal/ubuntu resolute/main armhf g++-15-arm-linux-gnueabihf armhf 15.2.0-5ubuntu1 [11.4 MB] 542s Get:30 http://ftpmaster.internal/ubuntu resolute/main armhf g++-15 armhf 15.2.0-5ubuntu1 [23.7 kB] 542s Get:31 http://ftpmaster.internal/ubuntu resolute/main armhf g++-arm-linux-gnueabihf armhf 4:15.2.0-4ubuntu1 [968 B] 542s Get:32 http://ftpmaster.internal/ubuntu resolute/main armhf g++ armhf 4:15.2.0-4ubuntu1 [1086 B] 542s Get:33 http://ftpmaster.internal/ubuntu resolute/main armhf libgfortran5 armhf 15.2.0-5ubuntu1 [334 kB] 542s Get:34 http://ftpmaster.internal/ubuntu resolute/main armhf libgfortran-15-dev armhf 15.2.0-5ubuntu1 [380 kB] 542s Get:35 http://ftpmaster.internal/ubuntu resolute/main armhf gfortran-15-arm-linux-gnueabihf armhf 15.2.0-5ubuntu1 [10.7 MB] 543s Get:36 http://ftpmaster.internal/ubuntu resolute/main armhf gfortran-15 armhf 15.2.0-5ubuntu1 [17.7 kB] 543s Get:37 http://ftpmaster.internal/ubuntu resolute/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 543s Get:38 http://ftpmaster.internal/ubuntu resolute/main armhf libblas3 armhf 3.12.1-6build1 [133 kB] 543s Get:39 http://ftpmaster.internal/ubuntu resolute/main armhf libfreetype6 armhf 2.13.3+dfsg-1build1 [334 kB] 543s Get:40 http://ftpmaster.internal/ubuntu resolute/main armhf libfontconfig1 armhf 2.15.0-2.3ubuntu1 [114 kB] 543s Get:41 http://ftpmaster.internal/ubuntu resolute/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 543s Get:42 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-render0 armhf 1.17.0-2build1 [15.5 kB] 543s Get:43 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-shm0 armhf 1.17.0-2build1 [5962 B] 543s Get:44 http://ftpmaster.internal/ubuntu resolute/main armhf libxrender1 armhf 1:0.9.12-1 [16.6 kB] 543s Get:45 http://ftpmaster.internal/ubuntu resolute/main armhf libcairo2 armhf 1.18.4-1build1 [489 kB] 543s Get:46 http://ftpmaster.internal/ubuntu resolute/main armhf libcurl3t64-gnutls armhf 8.14.1-2ubuntu1 [352 kB] 543s Get:47 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate0 armhf 1.23-2 [38.7 kB] 543s Get:48 http://ftpmaster.internal/ubuntu resolute/universe armhf libdouble-conversion3 armhf 3.3.1-1build1 [39.3 kB] 543s Get:49 http://ftpmaster.internal/ubuntu resolute/main armhf libdrm-amdgpu1 armhf 2.4.125-1 [19.5 kB] 543s Get:50 http://ftpmaster.internal/ubuntu resolute/main armhf libfftw3-double3 armhf 3.3.10-2fakesync1build2 [368 kB] 543s Get:51 http://ftpmaster.internal/ubuntu resolute/main armhf libllvm20 armhf 1:20.1.8-0ubuntu4 [29.5 MB] 544s Get:52 http://ftpmaster.internal/ubuntu resolute/main armhf libx11-xcb1 armhf 2:1.8.12-1build1 [7920 B] 544s Get:53 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-dri3-0 armhf 1.17.0-2build1 [7350 B] 544s Get:54 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-present0 armhf 1.17.0-2build1 [6094 B] 544s Get:55 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-randr0 armhf 1.17.0-2build1 [16.9 kB] 544s Get:56 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-sync1 armhf 1.17.0-2build1 [8852 B] 544s Get:57 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-xfixes0 armhf 1.17.0-2build1 [10.2 kB] 544s Get:58 http://ftpmaster.internal/ubuntu resolute/main armhf libxshmfence1 armhf 1.3.3-1 [4948 B] 544s Get:59 http://ftpmaster.internal/ubuntu resolute/main armhf mesa-libgallium armhf 25.2.3-1ubuntu1 [8778 kB] 544s Get:60 http://ftpmaster.internal/ubuntu resolute/main armhf libgbm1 armhf 25.2.3-1ubuntu1 [30.0 kB] 544s Get:61 http://ftpmaster.internal/ubuntu resolute/main armhf libvulkan1 armhf 1.4.321.0-1 [130 kB] 544s Get:62 http://ftpmaster.internal/ubuntu resolute/main armhf libgl1-mesa-dri armhf 25.2.3-1ubuntu1 [32.3 kB] 544s Get:63 http://ftpmaster.internal/ubuntu resolute/main armhf libglvnd0 armhf 1.7.0-1build2 [64.7 kB] 544s Get:64 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-glx0 armhf 1.17.0-2build1 [22.8 kB] 544s Get:65 http://ftpmaster.internal/ubuntu resolute/main armhf libxxf86vm1 armhf 1:1.1.4-1build4 [8068 B] 544s Get:66 http://ftpmaster.internal/ubuntu resolute/main armhf libglx-mesa0 armhf 25.2.3-1ubuntu1 [87.2 kB] 544s Get:67 http://ftpmaster.internal/ubuntu resolute/main armhf libglx0 armhf 1.7.0-1build2 [37.9 kB] 544s Get:68 http://ftpmaster.internal/ubuntu resolute/main armhf libgl1 armhf 1.7.0-1build2 [103 kB] 544s Get:69 http://ftpmaster.internal/ubuntu resolute/universe armhf libgl2ps1.4 armhf 1.4.2+dfsg1-2build1 [37.7 kB] 545s Get:70 http://ftpmaster.internal/ubuntu resolute/universe armhf libglew2.2 armhf 2.2.0-4build1 [197 kB] 545s Get:71 http://ftpmaster.internal/ubuntu resolute/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 545s Get:72 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-310 armhf 1.14.5+repack-3build1 [1411 kB] 545s Get:73 http://ftpmaster.internal/ubuntu resolute/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-3build1 [58.9 kB] 545s Get:74 http://ftpmaster.internal/ubuntu resolute/universe armhf libhwloc15 armhf 2.12.2-1 [149 kB] 545s Get:75 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg-turbo8 armhf 2.1.5-4ubuntu2 [127 kB] 545s Get:76 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 545s Get:77 http://ftpmaster.internal/ubuntu resolute/main armhf libjsoncpp26 armhf 1.9.6-3 [75.5 kB] 545s Get:78 http://ftpmaster.internal/ubuntu resolute/universe armhf libkim-api2 armhf 2.3.0-1ubuntu1 [566 kB] 545s Get:79 http://ftpmaster.internal/ubuntu resolute/main armhf liblapack3 armhf 3.12.1-6build1 [2091 kB] 545s Get:80 http://ftpmaster.internal/ubuntu resolute/universe armhf libmpich12 armhf 4.3.0+really4.2.1-1build1 [1688 kB] 545s Get:81 http://ftpmaster.internal/ubuntu resolute/universe armhf libnetcdf22 armhf 1:4.9.3-1build1 [511 kB] 545s Get:82 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.13 armhf 3.13.7-1 [2123 kB] 545s Get:83 http://ftpmaster.internal/ubuntu resolute/universe armhf libvoro++1 armhf 0.5+revert-to-0.4.6+dfsg1-1 [94.8 kB] 545s Get:84 http://ftpmaster.internal/ubuntu resolute/main armhf libogg0 armhf 1.3.5-3build1 [20.5 kB] 545s Get:85 http://ftpmaster.internal/ubuntu resolute/main armhf libopengl0 armhf 1.7.0-1build2 [36.0 kB] 545s Get:86 http://ftpmaster.internal/ubuntu resolute/universe armhf proj-data all 9.6.0-1 [7955 kB] 545s Get:87 http://ftpmaster.internal/ubuntu resolute/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 545s Get:88 http://ftpmaster.internal/ubuntu resolute/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 545s Get:89 http://ftpmaster.internal/ubuntu resolute/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 545s Get:90 http://ftpmaster.internal/ubuntu resolute/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 545s Get:91 http://ftpmaster.internal/ubuntu resolute/main armhf libtiff6 armhf 4.7.0-3ubuntu3 [188 kB] 545s Get:92 http://ftpmaster.internal/ubuntu resolute/universe armhf libproj25 armhf 9.6.0-1 [1345 kB] 545s Get:93 http://ftpmaster.internal/ubuntu resolute/universe armhf libtbbbind-2-5 armhf 2022.1.0-1 [13.2 kB] 545s Get:94 http://ftpmaster.internal/ubuntu resolute/universe armhf libtbbmalloc2 armhf 2022.1.0-1 [47.4 kB] 545s Get:95 http://ftpmaster.internal/ubuntu resolute/universe armhf libtbb12 armhf 2022.1.0-1 [81.5 kB] 545s Get:96 http://ftpmaster.internal/ubuntu resolute/main armhf libtcl8.6 armhf 8.6.17+dfsg-1 [918 kB] 545s Get:97 http://ftpmaster.internal/ubuntu resolute/main armhf libtheoradec1 armhf 1.2.0~alpha1+dfsg-6 [45.8 kB] 545s Get:98 http://ftpmaster.internal/ubuntu resolute/main armhf libtheoraenc1 armhf 1.2.0~alpha1+dfsg-6 [91.8 kB] 545s Get:99 http://ftpmaster.internal/ubuntu resolute/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 545s Get:100 http://ftpmaster.internal/ubuntu resolute/main armhf x11-common all 1:7.7+24ubuntu1 [22.4 kB] 545s Get:101 http://ftpmaster.internal/ubuntu resolute/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 546s Get:102 http://ftpmaster.internal/ubuntu resolute/main armhf libtk8.6 armhf 8.6.17-1 [694 kB] 546s Get:103 http://ftpmaster.internal/ubuntu resolute/universe armhf libvtk9.3 armhf 9.3.0+dfsg1-4ubuntu2 [21.9 MB] 547s Get:104 http://ftpmaster.internal/ubuntu resolute/universe armhf liblammps0t64 armhf 20250204+dfsg.1-2 [7282 kB] 547s Get:105 http://ftpmaster.internal/ubuntu resolute/main armhf libnuma-dev armhf 2.0.19-1 [35.1 kB] 547s Get:106 http://ftpmaster.internal/ubuntu resolute/main armhf libltdl7 armhf 2.5.4-4build1 [40.0 kB] 547s Get:107 http://ftpmaster.internal/ubuntu resolute/main armhf libltdl-dev armhf 2.5.4-4build1 [169 kB] 547s Get:108 http://ftpmaster.internal/ubuntu resolute/universe armhf libhwloc-dev armhf 2.12.2-1 [248 kB] 547s Get:109 http://ftpmaster.internal/ubuntu resolute/universe armhf hwloc-nox armhf 2.12.2-1 [215 kB] 547s Get:110 http://ftpmaster.internal/ubuntu resolute/universe armhf libslurm42t64 armhf 24.11.5-4 [771 kB] 547s Get:111 http://ftpmaster.internal/ubuntu resolute/universe armhf mpich armhf 4.3.0+really4.2.1-1build1 [239 kB] 547s Get:112 http://ftpmaster.internal/ubuntu resolute/universe armhf libmpich-dev armhf 4.3.0+really4.2.1-1build1 [2644 kB] 547s Get:113 http://ftpmaster.internal/ubuntu resolute/universe armhf mpi-default-dev armhf 1.18 [3322 B] 547s Get:114 http://ftpmaster.internal/ubuntu resolute/universe armhf liblammps-dev armhf 20250204+dfsg.1-2 [114 kB] 547s Get:115 http://ftpmaster.internal/ubuntu resolute/universe armhf mpi-default-bin armhf 1.18 [2504 B] 547s Get:116 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-lammps armhf 20250204+dfsg.1-2 [75.4 kB] 548s Fetched 163 MB in 13s (12.1 MB/s) 548s Selecting previously unselected package m4. 548s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 548s Preparing to unpack .../000-m4_1.4.19-8_armhf.deb ... 548s Unpacking m4 (1.4.19-8) ... 548s Selecting previously unselected package autoconf. 548s Preparing to unpack .../001-autoconf_2.72-3.1ubuntu1_all.deb ... 548s Unpacking autoconf (2.72-3.1ubuntu1) ... 548s Selecting previously unselected package autotools-dev. 548s Preparing to unpack .../002-autotools-dev_20240727.1_all.deb ... 548s Unpacking autotools-dev (20240727.1) ... 548s Selecting previously unselected package automake. 548s Preparing to unpack .../003-automake_1%3a1.17-4ubuntu1_all.deb ... 548s Unpacking automake (1:1.17-4ubuntu1) ... 548s Selecting previously unselected package libisl23:armhf. 548s Preparing to unpack .../004-libisl23_0.27-1_armhf.deb ... 548s Unpacking libisl23:armhf (0.27-1) ... 549s Selecting previously unselected package libmpc3:armhf. 549s Preparing to unpack .../005-libmpc3_1.3.1-1build3_armhf.deb ... 549s Unpacking libmpc3:armhf (1.3.1-1build3) ... 549s Selecting previously unselected package cpp-15-arm-linux-gnueabihf. 549s Preparing to unpack .../006-cpp-15-arm-linux-gnueabihf_15.2.0-5ubuntu1_armhf.deb ... 549s Unpacking cpp-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 549s Selecting previously unselected package cpp-15. 549s Preparing to unpack .../007-cpp-15_15.2.0-5ubuntu1_armhf.deb ... 549s Unpacking cpp-15 (15.2.0-5ubuntu1) ... 549s Selecting previously unselected package cpp-arm-linux-gnueabihf. 549s Preparing to unpack .../008-cpp-arm-linux-gnueabihf_4%3a15.2.0-4ubuntu1_armhf.deb ... 549s Unpacking cpp-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 549s Selecting previously unselected package cpp. 549s Preparing to unpack .../009-cpp_4%3a15.2.0-4ubuntu1_armhf.deb ... 549s Unpacking cpp (4:15.2.0-4ubuntu1) ... 549s Selecting previously unselected package fonts-dejavu-mono. 549s Preparing to unpack .../010-fonts-dejavu-mono_2.37-8_all.deb ... 549s Unpacking fonts-dejavu-mono (2.37-8) ... 549s Selecting previously unselected package fonts-dejavu-core. 549s Preparing to unpack .../011-fonts-dejavu-core_2.37-8_all.deb ... 549s Unpacking fonts-dejavu-core (2.37-8) ... 549s Selecting previously unselected package fontconfig-config. 549s Preparing to unpack .../012-fontconfig-config_2.15.0-2.3ubuntu1_armhf.deb ... 549s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 549s Selecting previously unselected package libcc1-0:armhf. 549s Preparing to unpack .../013-libcc1-0_15.2.0-5ubuntu1_armhf.deb ... 549s Unpacking libcc1-0:armhf (15.2.0-5ubuntu1) ... 550s Selecting previously unselected package libgomp1:armhf. 550s Preparing to unpack .../014-libgomp1_15.2.0-5ubuntu1_armhf.deb ... 550s Unpacking libgomp1:armhf (15.2.0-5ubuntu1) ... 550s Selecting previously unselected package libasan8:armhf. 550s Preparing to unpack .../015-libasan8_15.2.0-5ubuntu1_armhf.deb ... 550s Unpacking libasan8:armhf (15.2.0-5ubuntu1) ... 550s Selecting previously unselected package libubsan1:armhf. 550s Preparing to unpack .../016-libubsan1_15.2.0-5ubuntu1_armhf.deb ... 550s Unpacking libubsan1:armhf (15.2.0-5ubuntu1) ... 550s Selecting previously unselected package libgcc-15-dev:armhf. 550s Preparing to unpack .../017-libgcc-15-dev_15.2.0-5ubuntu1_armhf.deb ... 550s Unpacking libgcc-15-dev:armhf (15.2.0-5ubuntu1) ... 550s Selecting previously unselected package gcc-15-arm-linux-gnueabihf. 550s Preparing to unpack .../018-gcc-15-arm-linux-gnueabihf_15.2.0-5ubuntu1_armhf.deb ... 550s Unpacking gcc-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 550s Selecting previously unselected package gcc-15. 550s Preparing to unpack .../019-gcc-15_15.2.0-5ubuntu1_armhf.deb ... 550s Unpacking gcc-15 (15.2.0-5ubuntu1) ... 550s Selecting previously unselected package gcc-arm-linux-gnueabihf. 550s Preparing to unpack .../020-gcc-arm-linux-gnueabihf_4%3a15.2.0-4ubuntu1_armhf.deb ... 550s Unpacking gcc-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 550s Selecting previously unselected package gcc. 550s Preparing to unpack .../021-gcc_4%3a15.2.0-4ubuntu1_armhf.deb ... 550s Unpacking gcc (4:15.2.0-4ubuntu1) ... 550s Selecting previously unselected package libc-dev-bin. 550s Preparing to unpack .../022-libc-dev-bin_2.42-0ubuntu3_armhf.deb ... 550s Unpacking libc-dev-bin (2.42-0ubuntu3) ... 550s Selecting previously unselected package linux-libc-dev:armhf. 550s Preparing to unpack .../023-linux-libc-dev_6.17.0-5.5_armhf.deb ... 550s Unpacking linux-libc-dev:armhf (6.17.0-5.5) ... 551s Selecting previously unselected package libcrypt-dev:armhf. 551s Preparing to unpack .../024-libcrypt-dev_1%3a4.4.38-1build1_armhf.deb ... 551s Unpacking libcrypt-dev:armhf (1:4.4.38-1build1) ... 551s Selecting previously unselected package rpcsvc-proto. 551s Preparing to unpack .../025-rpcsvc-proto_1.4.3-1_armhf.deb ... 551s Unpacking rpcsvc-proto (1.4.3-1) ... 551s Selecting previously unselected package libc6-dev:armhf. 551s Preparing to unpack .../026-libc6-dev_2.42-0ubuntu3_armhf.deb ... 551s Unpacking libc6-dev:armhf (2.42-0ubuntu3) ... 551s Selecting previously unselected package libstdc++-15-dev:armhf. 551s Preparing to unpack .../027-libstdc++-15-dev_15.2.0-5ubuntu1_armhf.deb ... 551s Unpacking libstdc++-15-dev:armhf (15.2.0-5ubuntu1) ... 551s Selecting previously unselected package g++-15-arm-linux-gnueabihf. 551s Preparing to unpack .../028-g++-15-arm-linux-gnueabihf_15.2.0-5ubuntu1_armhf.deb ... 551s Unpacking g++-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 551s Selecting previously unselected package g++-15. 551s Preparing to unpack .../029-g++-15_15.2.0-5ubuntu1_armhf.deb ... 551s Unpacking g++-15 (15.2.0-5ubuntu1) ... 551s Selecting previously unselected package g++-arm-linux-gnueabihf. 551s Preparing to unpack .../030-g++-arm-linux-gnueabihf_4%3a15.2.0-4ubuntu1_armhf.deb ... 551s Unpacking g++-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 551s Selecting previously unselected package g++. 551s Preparing to unpack .../031-g++_4%3a15.2.0-4ubuntu1_armhf.deb ... 551s Unpacking g++ (4:15.2.0-4ubuntu1) ... 551s Selecting previously unselected package libgfortran5:armhf. 552s Preparing to unpack .../032-libgfortran5_15.2.0-5ubuntu1_armhf.deb ... 552s Unpacking libgfortran5:armhf (15.2.0-5ubuntu1) ... 552s Selecting previously unselected package libgfortran-15-dev:armhf. 552s Preparing to unpack .../033-libgfortran-15-dev_15.2.0-5ubuntu1_armhf.deb ... 552s Unpacking libgfortran-15-dev:armhf (15.2.0-5ubuntu1) ... 552s Selecting previously unselected package gfortran-15-arm-linux-gnueabihf. 552s Preparing to unpack .../034-gfortran-15-arm-linux-gnueabihf_15.2.0-5ubuntu1_armhf.deb ... 552s Unpacking gfortran-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 552s Selecting previously unselected package gfortran-15. 552s Preparing to unpack .../035-gfortran-15_15.2.0-5ubuntu1_armhf.deb ... 552s Unpacking gfortran-15 (15.2.0-5ubuntu1) ... 552s Selecting previously unselected package libaec0:armhf. 552s Preparing to unpack .../036-libaec0_1.1.3-1_armhf.deb ... 552s Unpacking libaec0:armhf (1.1.3-1) ... 552s Selecting previously unselected package libblas3:armhf. 552s Preparing to unpack .../037-libblas3_3.12.1-6build1_armhf.deb ... 552s Unpacking libblas3:armhf (3.12.1-6build1) ... 552s Selecting previously unselected package libfreetype6:armhf. 552s Preparing to unpack .../038-libfreetype6_2.13.3+dfsg-1build1_armhf.deb ... 552s Unpacking libfreetype6:armhf (2.13.3+dfsg-1build1) ... 552s Selecting previously unselected package libfontconfig1:armhf. 552s Preparing to unpack .../039-libfontconfig1_2.15.0-2.3ubuntu1_armhf.deb ... 552s Unpacking libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 552s Selecting previously unselected package libpixman-1-0:armhf. 552s Preparing to unpack .../040-libpixman-1-0_0.44.0-3_armhf.deb ... 552s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 552s Selecting previously unselected package libxcb-render0:armhf. 552s Preparing to unpack .../041-libxcb-render0_1.17.0-2build1_armhf.deb ... 552s Unpacking libxcb-render0:armhf (1.17.0-2build1) ... 552s Selecting previously unselected package libxcb-shm0:armhf. 552s Preparing to unpack .../042-libxcb-shm0_1.17.0-2build1_armhf.deb ... 552s Unpacking libxcb-shm0:armhf (1.17.0-2build1) ... 552s Selecting previously unselected package libxrender1:armhf. 552s Preparing to unpack .../043-libxrender1_1%3a0.9.12-1_armhf.deb ... 552s Unpacking libxrender1:armhf (1:0.9.12-1) ... 552s Selecting previously unselected package libcairo2:armhf. 552s Preparing to unpack .../044-libcairo2_1.18.4-1build1_armhf.deb ... 552s Unpacking libcairo2:armhf (1.18.4-1build1) ... 552s Selecting previously unselected package libcurl3t64-gnutls:armhf. 552s Preparing to unpack .../045-libcurl3t64-gnutls_8.14.1-2ubuntu1_armhf.deb ... 552s Unpacking libcurl3t64-gnutls:armhf (8.14.1-2ubuntu1) ... 552s Selecting previously unselected package libdeflate0:armhf. 552s Preparing to unpack .../046-libdeflate0_1.23-2_armhf.deb ... 552s Unpacking libdeflate0:armhf (1.23-2) ... 552s Selecting previously unselected package libdouble-conversion3:armhf. 552s Preparing to unpack .../047-libdouble-conversion3_3.3.1-1build1_armhf.deb ... 552s Unpacking libdouble-conversion3:armhf (3.3.1-1build1) ... 552s Selecting previously unselected package libdrm-amdgpu1:armhf. 552s Preparing to unpack .../048-libdrm-amdgpu1_2.4.125-1_armhf.deb ... 552s Unpacking libdrm-amdgpu1:armhf (2.4.125-1) ... 552s Selecting previously unselected package libfftw3-double3:armhf. 552s Preparing to unpack .../049-libfftw3-double3_3.3.10-2fakesync1build2_armhf.deb ... 552s Unpacking libfftw3-double3:armhf (3.3.10-2fakesync1build2) ... 553s Selecting previously unselected package libllvm20:armhf. 553s Preparing to unpack .../050-libllvm20_1%3a20.1.8-0ubuntu4_armhf.deb ... 553s Unpacking libllvm20:armhf (1:20.1.8-0ubuntu4) ... 554s Selecting previously unselected package libx11-xcb1:armhf. 554s Preparing to unpack .../051-libx11-xcb1_2%3a1.8.12-1build1_armhf.deb ... 554s Unpacking libx11-xcb1:armhf (2:1.8.12-1build1) ... 554s Selecting previously unselected package libxcb-dri3-0:armhf. 554s Preparing to unpack .../052-libxcb-dri3-0_1.17.0-2build1_armhf.deb ... 554s Unpacking libxcb-dri3-0:armhf (1.17.0-2build1) ... 554s Selecting previously unselected package libxcb-present0:armhf. 554s Preparing to unpack .../053-libxcb-present0_1.17.0-2build1_armhf.deb ... 554s Unpacking libxcb-present0:armhf (1.17.0-2build1) ... 554s Selecting previously unselected package libxcb-randr0:armhf. 554s Preparing to unpack .../054-libxcb-randr0_1.17.0-2build1_armhf.deb ... 554s Unpacking libxcb-randr0:armhf (1.17.0-2build1) ... 554s Selecting previously unselected package libxcb-sync1:armhf. 554s Preparing to unpack .../055-libxcb-sync1_1.17.0-2build1_armhf.deb ... 554s Unpacking libxcb-sync1:armhf (1.17.0-2build1) ... 554s Selecting previously unselected package libxcb-xfixes0:armhf. 554s Preparing to unpack .../056-libxcb-xfixes0_1.17.0-2build1_armhf.deb ... 554s Unpacking libxcb-xfixes0:armhf (1.17.0-2build1) ... 554s Selecting previously unselected package libxshmfence1:armhf. 554s Preparing to unpack .../057-libxshmfence1_1.3.3-1_armhf.deb ... 554s Unpacking libxshmfence1:armhf (1.3.3-1) ... 554s Selecting previously unselected package mesa-libgallium:armhf. 554s Preparing to unpack .../058-mesa-libgallium_25.2.3-1ubuntu1_armhf.deb ... 554s Unpacking mesa-libgallium:armhf (25.2.3-1ubuntu1) ... 554s Selecting previously unselected package libgbm1:armhf. 554s Preparing to unpack .../059-libgbm1_25.2.3-1ubuntu1_armhf.deb ... 554s Unpacking libgbm1:armhf (25.2.3-1ubuntu1) ... 554s Selecting previously unselected package libvulkan1:armhf. 554s Preparing to unpack .../060-libvulkan1_1.4.321.0-1_armhf.deb ... 554s Unpacking libvulkan1:armhf (1.4.321.0-1) ... 554s Selecting previously unselected package libgl1-mesa-dri:armhf. 554s Preparing to unpack .../061-libgl1-mesa-dri_25.2.3-1ubuntu1_armhf.deb ... 554s Unpacking libgl1-mesa-dri:armhf (25.2.3-1ubuntu1) ... 554s Selecting previously unselected package libglvnd0:armhf. 554s Preparing to unpack .../062-libglvnd0_1.7.0-1build2_armhf.deb ... 554s Unpacking libglvnd0:armhf (1.7.0-1build2) ... 554s Selecting previously unselected package libxcb-glx0:armhf. 554s Preparing to unpack .../063-libxcb-glx0_1.17.0-2build1_armhf.deb ... 554s Unpacking libxcb-glx0:armhf (1.17.0-2build1) ... 555s Selecting previously unselected package libxxf86vm1:armhf. 555s Preparing to unpack .../064-libxxf86vm1_1%3a1.1.4-1build4_armhf.deb ... 555s Unpacking libxxf86vm1:armhf (1:1.1.4-1build4) ... 555s Selecting previously unselected package libglx-mesa0:armhf. 555s Preparing to unpack .../065-libglx-mesa0_25.2.3-1ubuntu1_armhf.deb ... 555s Unpacking libglx-mesa0:armhf (25.2.3-1ubuntu1) ... 555s Selecting previously unselected package libglx0:armhf. 555s Preparing to unpack .../066-libglx0_1.7.0-1build2_armhf.deb ... 555s Unpacking libglx0:armhf (1.7.0-1build2) ... 555s Selecting previously unselected package libgl1:armhf. 555s Preparing to unpack .../067-libgl1_1.7.0-1build2_armhf.deb ... 555s Unpacking libgl1:armhf (1.7.0-1build2) ... 555s Selecting previously unselected package libgl2ps1.4. 555s Preparing to unpack .../068-libgl2ps1.4_1.4.2+dfsg1-2build1_armhf.deb ... 555s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 555s Selecting previously unselected package libglew2.2:armhf. 555s Preparing to unpack .../069-libglew2.2_2.2.0-4build1_armhf.deb ... 555s Unpacking libglew2.2:armhf (2.2.0-4build1) ... 555s Selecting previously unselected package libsz2:armhf. 555s Preparing to unpack .../070-libsz2_1.1.3-1_armhf.deb ... 555s Unpacking libsz2:armhf (1.1.3-1) ... 555s Selecting previously unselected package libhdf5-310:armhf. 555s Preparing to unpack .../071-libhdf5-310_1.14.5+repack-3build1_armhf.deb ... 555s Unpacking libhdf5-310:armhf (1.14.5+repack-3build1) ... 555s Selecting previously unselected package libhdf5-hl-310:armhf. 555s Preparing to unpack .../072-libhdf5-hl-310_1.14.5+repack-3build1_armhf.deb ... 555s Unpacking libhdf5-hl-310:armhf (1.14.5+repack-3build1) ... 555s Selecting previously unselected package libhwloc15:armhf. 555s Preparing to unpack .../073-libhwloc15_2.12.2-1_armhf.deb ... 555s Unpacking libhwloc15:armhf (2.12.2-1) ... 555s Selecting previously unselected package libjpeg-turbo8:armhf. 555s Preparing to unpack .../074-libjpeg-turbo8_2.1.5-4ubuntu2_armhf.deb ... 555s Unpacking libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 555s Selecting previously unselected package libjpeg8:armhf. 555s Preparing to unpack .../075-libjpeg8_8c-2ubuntu11_armhf.deb ... 555s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 555s Selecting previously unselected package libjsoncpp26:armhf. 555s Preparing to unpack .../076-libjsoncpp26_1.9.6-3_armhf.deb ... 555s Unpacking libjsoncpp26:armhf (1.9.6-3) ... 555s Selecting previously unselected package libkim-api2:armhf. 555s Preparing to unpack .../077-libkim-api2_2.3.0-1ubuntu1_armhf.deb ... 555s Unpacking libkim-api2:armhf (2.3.0-1ubuntu1) ... 555s Selecting previously unselected package liblapack3:armhf. 555s Preparing to unpack .../078-liblapack3_3.12.1-6build1_armhf.deb ... 555s Unpacking liblapack3:armhf (3.12.1-6build1) ... 555s Selecting previously unselected package libmpich12:armhf. 555s Preparing to unpack .../079-libmpich12_4.3.0+really4.2.1-1build1_armhf.deb ... 555s Unpacking libmpich12:armhf (4.3.0+really4.2.1-1build1) ... 555s Selecting previously unselected package libnetcdf22:armhf. 555s Preparing to unpack .../080-libnetcdf22_1%3a4.9.3-1build1_armhf.deb ... 555s Unpacking libnetcdf22:armhf (1:4.9.3-1build1) ... 555s Selecting previously unselected package libpython3.13:armhf. 555s Preparing to unpack .../081-libpython3.13_3.13.7-1_armhf.deb ... 555s Unpacking libpython3.13:armhf (3.13.7-1) ... 556s Selecting previously unselected package libvoro++1. 556s Preparing to unpack .../082-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_armhf.deb ... 556s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 556s Selecting previously unselected package libogg0:armhf. 556s Preparing to unpack .../083-libogg0_1.3.5-3build1_armhf.deb ... 556s Unpacking libogg0:armhf (1.3.5-3build1) ... 556s Selecting previously unselected package libopengl0:armhf. 556s Preparing to unpack .../084-libopengl0_1.7.0-1build2_armhf.deb ... 556s Unpacking libopengl0:armhf (1.7.0-1build2) ... 556s Selecting previously unselected package proj-data. 556s Preparing to unpack .../085-proj-data_9.6.0-1_all.deb ... 556s Unpacking proj-data (9.6.0-1) ... 556s Selecting previously unselected package libjbig0:armhf. 556s Preparing to unpack .../086-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 556s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 556s Selecting previously unselected package liblerc4:armhf. 556s Preparing to unpack .../087-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 556s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 556s Selecting previously unselected package libsharpyuv0:armhf. 556s Preparing to unpack .../088-libsharpyuv0_1.5.0-0.1_armhf.deb ... 556s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 556s Selecting previously unselected package libwebp7:armhf. 556s Preparing to unpack .../089-libwebp7_1.5.0-0.1_armhf.deb ... 556s Unpacking libwebp7:armhf (1.5.0-0.1) ... 556s Selecting previously unselected package libtiff6:armhf. 556s Preparing to unpack .../090-libtiff6_4.7.0-3ubuntu3_armhf.deb ... 556s Unpacking libtiff6:armhf (4.7.0-3ubuntu3) ... 556s Selecting previously unselected package libproj25:armhf. 556s Preparing to unpack .../091-libproj25_9.6.0-1_armhf.deb ... 556s Unpacking libproj25:armhf (9.6.0-1) ... 556s Selecting previously unselected package libtbbbind-2-5:armhf. 556s Preparing to unpack .../092-libtbbbind-2-5_2022.1.0-1_armhf.deb ... 556s Unpacking libtbbbind-2-5:armhf (2022.1.0-1) ... 556s Selecting previously unselected package libtbbmalloc2:armhf. 556s Preparing to unpack .../093-libtbbmalloc2_2022.1.0-1_armhf.deb ... 556s Unpacking libtbbmalloc2:armhf (2022.1.0-1) ... 556s Selecting previously unselected package libtbb12:armhf. 556s Preparing to unpack .../094-libtbb12_2022.1.0-1_armhf.deb ... 556s Unpacking libtbb12:armhf (2022.1.0-1) ... 556s Selecting previously unselected package libtcl8.6:armhf. 556s Preparing to unpack .../095-libtcl8.6_8.6.17+dfsg-1_armhf.deb ... 556s Unpacking libtcl8.6:armhf (8.6.17+dfsg-1) ... 556s Selecting previously unselected package libtheoradec1:armhf. 557s Preparing to unpack .../096-libtheoradec1_1.2.0~alpha1+dfsg-6_armhf.deb ... 557s Unpacking libtheoradec1:armhf (1.2.0~alpha1+dfsg-6) ... 557s Selecting previously unselected package libtheoraenc1:armhf. 557s Preparing to unpack .../097-libtheoraenc1_1.2.0~alpha1+dfsg-6_armhf.deb ... 557s Unpacking libtheoraenc1:armhf (1.2.0~alpha1+dfsg-6) ... 557s Selecting previously unselected package libxft2:armhf. 557s Preparing to unpack .../098-libxft2_2.3.6-1build1_armhf.deb ... 557s Unpacking libxft2:armhf (2.3.6-1build1) ... 557s Selecting previously unselected package x11-common. 557s Preparing to unpack .../099-x11-common_1%3a7.7+24ubuntu1_all.deb ... 557s Unpacking x11-common (1:7.7+24ubuntu1) ... 557s Selecting previously unselected package libxss1:armhf. 557s Preparing to unpack .../100-libxss1_1%3a1.2.3-1build3_armhf.deb ... 557s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 557s Selecting previously unselected package libtk8.6:armhf. 557s Preparing to unpack .../101-libtk8.6_8.6.17-1_armhf.deb ... 557s Unpacking libtk8.6:armhf (8.6.17-1) ... 557s Selecting previously unselected package libvtk9.3:armhf. 557s Preparing to unpack .../102-libvtk9.3_9.3.0+dfsg1-4ubuntu2_armhf.deb ... 557s Unpacking libvtk9.3:armhf (9.3.0+dfsg1-4ubuntu2) ... 558s Selecting previously unselected package liblammps0t64:armhf. 558s Preparing to unpack .../103-liblammps0t64_20250204+dfsg.1-2_armhf.deb ... 558s Unpacking liblammps0t64:armhf (20250204+dfsg.1-2) ... 558s Selecting previously unselected package libnuma-dev:armhf. 558s Preparing to unpack .../104-libnuma-dev_2.0.19-1_armhf.deb ... 558s Unpacking libnuma-dev:armhf (2.0.19-1) ... 558s Selecting previously unselected package libltdl7:armhf. 558s Preparing to unpack .../105-libltdl7_2.5.4-4build1_armhf.deb ... 558s Unpacking libltdl7:armhf (2.5.4-4build1) ... 558s Selecting previously unselected package libltdl-dev:armhf. 558s Preparing to unpack .../106-libltdl-dev_2.5.4-4build1_armhf.deb ... 558s Unpacking libltdl-dev:armhf (2.5.4-4build1) ... 558s Selecting previously unselected package libhwloc-dev:armhf. 558s Preparing to unpack .../107-libhwloc-dev_2.12.2-1_armhf.deb ... 558s Unpacking libhwloc-dev:armhf (2.12.2-1) ... 558s Selecting previously unselected package hwloc-nox. 558s Preparing to unpack .../108-hwloc-nox_2.12.2-1_armhf.deb ... 558s Unpacking hwloc-nox (2.12.2-1) ... 558s Selecting previously unselected package libslurm42t64. 558s Preparing to unpack .../109-libslurm42t64_24.11.5-4_armhf.deb ... 558s Unpacking libslurm42t64 (24.11.5-4) ... 558s Selecting previously unselected package mpich. 558s Preparing to unpack .../110-mpich_4.3.0+really4.2.1-1build1_armhf.deb ... 558s Unpacking mpich (4.3.0+really4.2.1-1build1) ... 558s Selecting previously unselected package libmpich-dev:armhf. 558s Preparing to unpack .../111-libmpich-dev_4.3.0+really4.2.1-1build1_armhf.deb ... 558s Unpacking libmpich-dev:armhf (4.3.0+really4.2.1-1build1) ... 558s Selecting previously unselected package mpi-default-dev. 558s Preparing 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libdouble-conversion3:armhf (3.3.1-1build1) ... 559s Setting up libxcb-xfixes0:armhf (1.17.0-2build1) ... 559s Setting up libogg0:armhf (1.3.5-3build1) ... 559s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 559s Setting up proj-data (9.6.0-1) ... 559s Setting up libxrender1:armhf (1:0.9.12-1) ... 559s Setting up libxcb-render0:armhf (1.17.0-2build1) ... 559s Setting up libglvnd0:armhf (1.7.0-1build2) ... 559s Setting up libxcb-glx0:armhf (1.17.0-2build1) ... 559s Setting up x11-common (1:7.7+24ubuntu1) ... 559s Setting up libdeflate0:armhf (1.23-2) ... 559s Setting up libcurl3t64-gnutls:armhf (8.14.1-2ubuntu1) ... 559s Setting up linux-libc-dev:armhf (6.17.0-5.5) ... 559s Setting up m4 (1.4.19-8) ... 559s Setting up libxcb-shm0:armhf (1.17.0-2build1) ... 559s Setting up libgomp1:armhf (15.2.0-5ubuntu1) ... 559s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 559s Setting up libaec0:armhf (1.1.3-1) ... 559s Setting up libopengl0:armhf (1.7.0-1build2) ... 559s Setting up libxxf86vm1:armhf (1:1.1.4-1build4) ... 559s Setting up libxcb-present0:armhf (1.17.0-2build1) ... 559s Setting up libtheoraenc1:armhf (1.2.0~alpha1+dfsg-6) ... 559s Setting up autotools-dev (20240727.1) ... 559s Setting up libblas3:armhf (3.12.1-6build1) ... 559s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 559s Setting up rpcsvc-proto (1.4.3-1) ... 559s Setting up libfreetype6:armhf (2.13.3+dfsg-1build1) ... 559s Setting up libxcb-sync1:armhf (1.17.0-2build1) ... 559s Setting up libjsoncpp26:armhf (1.9.6-3) ... 559s Setting up libslurm42t64 (24.11.5-4) ... 559s Setting up fonts-dejavu-mono (2.37-8) ... 559s Setting up libhwloc15:armhf (2.12.2-1) ... 559s Setting up libmpc3:armhf (1.3.1-1build3) ... 559s Setting up libtcl8.6:armhf (8.6.17+dfsg-1) ... 559s Setting up libllvm20:armhf (1:20.1.8-0ubuntu4) ... 559s Setting up fonts-dejavu-core (2.37-8) ... 559s Setting up libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 559s Setting up libltdl7:armhf (2.5.4-4build1) ... 559s Setting up libfftw3-double3:armhf (3.3.10-2fakesync1build2) ... 559s Setting up libgfortran5:armhf (15.2.0-5ubuntu1) ... 559s Setting up libvulkan1:armhf (1.4.321.0-1) ... 559s Setting up autoconf (2.72-3.1ubuntu1) ... 559s Setting up libwebp7:armhf (1.5.0-0.1) ... 559s Setting up libubsan1:armhf (15.2.0-5ubuntu1) ... 559s Setting up libmpich12:armhf (4.3.0+really4.2.1-1build1) ... 559s Setting up libxshmfence1:armhf (1.3.3-1) ... 559s Setting up libcrypt-dev:armhf (1:4.4.38-1build1) ... 559s Setting up libxcb-randr0:armhf (1.17.0-2build1) ... 559s Setting up libasan8:armhf (15.2.0-5ubuntu1) ... 559s Setting up libxss1:armhf (1:1.2.3-1build3) ... 559s Setting up libisl23:armhf (0.27-1) ... 559s Setting up libc-dev-bin (2.42-0ubuntu3) ... 559s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 559s Setting up cpp-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 559s Setting up libcc1-0:armhf (15.2.0-5ubuntu1) ... 559s Setting up cpp-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 559s Setting up libsz2:armhf (1.1.3-1) ... 559s Setting up libdrm-amdgpu1:armhf (2.4.125-1) ... 559s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 559s Setting up automake (1:1.17-4ubuntu1) ... 559s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 559s Setting up mesa-libgallium:armhf (25.2.3-1ubuntu1) ... 559s Setting up liblapack3:armhf (3.12.1-6build1) ... 559s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 559s Setting up libgcc-15-dev:armhf (15.2.0-5ubuntu1) ... 559s Setting up gcc-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 559s Setting up libgbm1:armhf (25.2.3-1ubuntu1) ... 559s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 560s Setting up libgl1-mesa-dri:armhf (25.2.3-1ubuntu1) ... 560s Setting up hwloc-nox (2.12.2-1) ... 560s Setting up libkim-api2:armhf (2.3.0-1ubuntu1) ... 560s Setting up libgfortran-15-dev:armhf (15.2.0-5ubuntu1) ... 560s Setting up libtbbbind-2-5:armhf (2022.1.0-1) ... 560s Setting up libltdl-dev:armhf (2.5.4-4build1) ... 560s Setting up libhdf5-310:armhf (1.14.5+repack-3build1) ... 560s Setting up cpp-15 (15.2.0-5ubuntu1) ... 560s Setting up libtiff6:armhf (4.7.0-3ubuntu3) ... 560s Setting up cpp (4:15.2.0-4ubuntu1) ... 560s Setting up libc6-dev:armhf (2.42-0ubuntu3) ... 560s Setting up libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 560s Setting up gcc-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 560s Setting up libhdf5-hl-310:armhf (1.14.5+repack-3build1) ... 560s Setting up libxft2:armhf (2.3.6-1build1) ... 560s Setting up libglx-mesa0:armhf (25.2.3-1ubuntu1) ... 560s Setting up gfortran-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 560s Setting up libglx0:armhf (1.7.0-1build2) ... 560s Setting up libproj25:armhf (9.6.0-1) ... 560s Setting up mpich (4.3.0+really4.2.1-1build1) ... 560s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 560s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 560s Setting up libtk8.6:armhf (8.6.17-1) ... 560s Setting up libnetcdf22:armhf (1:4.9.3-1build1) ... 560s Setting up mpi-default-bin (1.18) ... 560s Setting up libtbb12:armhf (2022.1.0-1) ... 560s Setting up libcairo2:armhf (1.18.4-1build1) ... 560s Setting up libnuma-dev:armhf (2.0.19-1) ... 560s Setting up gcc-15 (15.2.0-5ubuntu1) ... 560s Setting up libgl1:armhf (1.7.0-1build2) ... 560s Setting up libstdc++-15-dev:armhf (15.2.0-5ubuntu1) ... 560s Setting up libtheoradec1:armhf (1.2.0~alpha1+dfsg-6) ... 560s Setting up libglew2.2:armhf (2.2.0-4build1) ... 560s Setting up libhwloc-dev:armhf (2.12.2-1) ... 560s Setting up gfortran-15 (15.2.0-5ubuntu1) ... 560s Setting up g++-15-arm-linux-gnueabihf (15.2.0-5ubuntu1) ... 560s Setting up gcc (4:15.2.0-4ubuntu1) ... 560s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 560s Setting up libvtk9.3:armhf (9.3.0+dfsg1-4ubuntu2) ... 560s Setting up g++-15 (15.2.0-5ubuntu1) ... 560s Setting up g++-arm-linux-gnueabihf (4:15.2.0-4ubuntu1) ... 560s Setting up liblammps0t64:armhf (20250204+dfsg.1-2) ... 560s Setting up g++ (4:15.2.0-4ubuntu1) ... 560s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 560s Setting up libmpich-dev:armhf (4.3.0+really4.2.1-1build1) ... 560s update-alternatives: using /usr/include/arm-linux-gnueabihf/mpich to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode 560s Setting up mpi-default-dev (1.18) ... 560s Setting up liblammps-dev (20250204+dfsg.1-2) ... 560s Setting up python3-lammps (20250204+dfsg.1-2) ... 560s Processing triggers for man-db (2.13.1-1) ... 561s Processing triggers for install-info (7.1.1-1ubuntu1) ... 561s Processing triggers for libc-bin (2.42-0ubuntu3) ... 595s autopkgtest [21:22:32]: test command1: cd python/examples; python3 demo.py 595s autopkgtest [21:22:32]: test command1: [----------------------- 597s LAMMPS (4 Feb 2025) 597s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99) 597s using 1 OpenMP thread(s) per MPI task 597s Lattice spacing in x,y,z = 1.6795962 1.6795962 1.6795962 597s Created orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 597s 1 by 1 by 1 MPI processor grid 597s Created 4000 atoms 597s using lattice units in orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 597s create_atoms CPU = 0.001 seconds 597s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 597s Neighbor list info ... 597s update: every = 20 steps, delay = 0 steps, check = no 597s max neighbors/atom: 2000, page size: 100000 597s master list distance cutoff = 2.8 597s ghost atom cutoff = 2.8 597s binsize = 1.4, bins = 12 12 12 597s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 597s (1) pair lj/cut, perpetual 597s attributes: half, newton on 597s pair build: half/bin/atomonly/newton 597s stencil: half/bin/3d 597s bin: standard 597s Setting up Verlet run ... 597s Unit style : lj 597s Current step : 0 597s Time step : 0.005 597s Per MPI rank memory allocation (min/avg/max) = 3.513 | 3.513 | 3.513 Mbytes 597s Step Temp E_pair E_mol TotEng Press 597s 0 1.44 -6.7733681 0 -4.6139081 -5.0199732 598s 100 0.76838481 -5.7743924 0 -4.6221033 0.13682061 598s Loop time of 0.267214 on 1 procs for 100 steps with 4000 atoms 598s 598s Performance: 161668.047 tau/day, 374.232 timesteps/s, 1.497 Matom-step/s 598s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 598s 598s MPI task timing breakdown: 598s Section | min time | avg time | max time |%varavg| %total 598s --------------------------------------------------------------- 598s Pair | 0.22534 | 0.22534 | 0.22534 | 0.0 | 84.33 598s Neigh | 0.028939 | 0.028939 | 0.028939 | 0.0 | 10.83 598s Comm | 0.0063189 | 0.0063189 | 0.0063189 | 0.0 | 2.36 598s Output | 0.00010276 | 0.00010276 | 0.00010276 | 0.0 | 0.04 598s Modify | 0.0045866 | 0.0045866 | 0.0045866 | 0.0 | 1.72 598s Other | | 0.001925 | | | 0.72 598s 598s Nlocal: 4000 ave 4000 max 4000 min 598s Histogram: 1 0 0 0 0 0 0 0 0 0 598s Nghost: 5758 ave 5758 max 5758 min 598s Histogram: 1 0 0 0 0 0 0 0 0 0 598s Neighs: 150488 ave 150488 max 150488 min 598s Histogram: 1 0 0 0 0 0 0 0 0 0 598s 598s Total # of neighbors = 150488 598s Ave neighs/atom = 37.622 598s Neighbor list builds = 5 598s Dangerous builds not checked 598s 598s Python output: 598s Natoms, mass, x[0][0] coord = 4000 1.0 16.651271530416228 598s Temperature from compute = 0.7683848148006243 598s Energy from equal-style variable = -5.774392400140558 598s Velocity component from atom-style variable = -0.16696430269966717 598s Volume from get_thermo = 4738.213693437576 598s Natoms from get_natoms = 4000 598s Global coords from gather_atoms = 16.651271530416228 16.79001077301678 0.19047524160173676 598s Changed x[0][0] via scatter_atoms = 17.651271530416228 598s Total wall time: 0:00:00 598s autopkgtest [21:22:35]: test command1: -----------------------] 602s command1 PASS 602s autopkgtest [21:22:39]: test command1: - - - - - - - - - - results - - - - - - - - - - 605s autopkgtest [21:22:42]: @@@@@@@@@@@@@@@@@@@@ summary 605s crack PASS 605s dipole PASS 605s ellipse PASS 605s flow PASS 605s friction PASS 605s hugo PASS 605s command1 PASS