0s autopkgtest [18:10:59]: starting date and time: 2025-10-18 18:10:59+0000 0s autopkgtest [18:10:59]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [18:10:59]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yffv9mng/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults --apt-upgrade kmer --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.13.7-2 -- lxd -r lxd-armhf-10.145.243.46 lxd-armhf-10.145.243.46:autopkgtest/ubuntu/resolute/armhf 20s autopkgtest [18:11:19]: testbed dpkg architecture: armhf 22s autopkgtest [18:11:21]: testbed apt version: 3.1.6ubuntu2 26s autopkgtest [18:11:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 28s autopkgtest [18:11:27]: testbed release detected to be: None 35s autopkgtest [18:11:34]: updating testbed package index (apt update) 37s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 37s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [83.3 kB] 37s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 37s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 37s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 37s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [16.7 kB] 37s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [50.7 kB] 37s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [456 kB] 37s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [85.4 kB] 38s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted armhf Packages [940 B] 38s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [321 kB] 38s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [3680 B] 38s Get:13 http://ftpmaster.internal/ubuntu resolute/restricted Sources [14.4 kB] 38s Get:14 http://ftpmaster.internal/ubuntu resolute/multiverse Sources [307 kB] 38s Get:15 http://ftpmaster.internal/ubuntu resolute/main Sources [1399 kB] 38s Get:16 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.1 MB] 42s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1357 kB] 42s Get:18 http://ftpmaster.internal/ubuntu resolute/restricted armhf Packages [1672 B] 42s Get:19 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [14.8 MB] 45s Get:20 http://ftpmaster.internal/ubuntu resolute/multiverse armhf Packages [182 kB] 47s Fetched 40.3 MB in 10s (3906 kB/s) 48s Reading package lists... 54s autopkgtest [18:11:53]: upgrading testbed (apt dist-upgrade and autopurge) 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Calculating upgrade... 57s The following packages will be upgraded: 57s apparmor apt base-files binutils binutils-arm-linux-gnueabihf 57s binutils-common cloud-init cloud-init-base distro-info-data gcc-15-base 57s gir1.2-girepository-2.0 libapparmor1 libapt-pkg7.0 libatomic1 libbinutils 57s libctf-nobfd0 libctf0 libgcc-s1 libgirepository-1.0-1 libpython3-stdlib 57s libsframe2 libstdc++6 lto-disabled-list python3 python3-minimal sudo-rs 57s 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Need to get 7366 kB of archives. 57s After this operation, 14.3 kB of additional disk space will be used. 57s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf base-files armhf 14ubuntu4 [75.4 kB] 57s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libatomic1 armhf 15.2.0-5ubuntu1 [7942 B] 57s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-15-base armhf 15.2.0-5ubuntu1 [58.1 kB] 57s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libgcc-s1 armhf 15.2.0-5ubuntu1 [40.6 kB] 57s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libstdc++6 armhf 15.2.0-5ubuntu1 [731 kB] 58s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libapt-pkg7.0 armhf 3.1.8ubuntu1 [1148 kB] 58s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf apt armhf 3.1.8ubuntu1 [1404 kB] 58s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-minimal armhf 3.13.7-2 [27.8 kB] 58s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3 armhf 3.13.7-2 [23.9 kB] 58s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libpython3-stdlib armhf 3.13.7-2 [10.6 kB] 58s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf distro-info-data all 0.67~ubuntu1 [7004 B] 58s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf libgirepository-1.0-1 armhf 1.86.0-6 [111 kB] 58s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf gir1.2-girepository-2.0 armhf 1.86.0-6 [25.3 kB] 58s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf libapparmor1 armhf 5.0.0~alpha1-0ubuntu8.1 [52.9 kB] 58s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf sudo-rs armhf 0.2.8-1ubuntu5.1 [548 kB] 58s Get:16 http://ftpmaster.internal/ubuntu resolute/main armhf apparmor armhf 5.0.0~alpha1-0ubuntu8.1 [631 kB] 58s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libctf0 armhf 2.45-7ubuntu2 [75.7 kB] 58s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libctf-nobfd0 armhf 2.45-7ubuntu2 [79.1 kB] 58s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-arm-linux-gnueabihf armhf 2.45-7ubuntu2 [1022 kB] 58s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libbinutils armhf 2.45-7ubuntu2 [411 kB] 58s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf binutils armhf 2.45-7ubuntu2 [3240 B] 58s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-common armhf 2.45-7ubuntu2 [220 kB] 58s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libsframe2 armhf 2.45-7ubuntu2 [13.4 kB] 58s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init-base all 25.3-0ubuntu1 [625 kB] 58s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init all 25.3-0ubuntu1 [2106 B] 58s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf lto-disabled-list all 71 [12.5 kB] 58s Preconfiguring packages ... 59s Fetched 7366 kB in 1s (7583 kB/s) 59s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 59s Preparing to unpack .../base-files_14ubuntu4_armhf.deb ... 59s Unpacking base-files (14ubuntu4) over (14ubuntu3) ... 59s Setting up base-files (14ubuntu4) ... 59s Installing new version of config file /etc/issue ... 59s Installing new version of config file /etc/issue.net ... 59s Installing new version of config file /etc/lsb-release ... 60s motd-news.service is a disabled or a static unit not running, not starting it. 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 60s Preparing to unpack .../libatomic1_15.2.0-5ubuntu1_armhf.deb ... 60s Unpacking libatomic1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 60s Preparing to unpack .../gcc-15-base_15.2.0-5ubuntu1_armhf.deb ... 60s Unpacking gcc-15-base:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 60s Setting up gcc-15-base:armhf (15.2.0-5ubuntu1) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 60s Preparing to unpack .../libgcc-s1_15.2.0-5ubuntu1_armhf.deb ... 60s Unpacking libgcc-s1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 60s Setting up libgcc-s1:armhf (15.2.0-5ubuntu1) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 60s Preparing to unpack .../libstdc++6_15.2.0-5ubuntu1_armhf.deb ... 60s Unpacking libstdc++6:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 60s Setting up libstdc++6:armhf (15.2.0-5ubuntu1) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 60s Preparing to unpack .../libapt-pkg7.0_3.1.8ubuntu1_armhf.deb ... 60s Unpacking libapt-pkg7.0:armhf (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 60s Setting up libapt-pkg7.0:armhf (3.1.8ubuntu1) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 60s Preparing to unpack .../apt_3.1.8ubuntu1_armhf.deb ... 60s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 60s Setting up apt (3.1.8ubuntu1) ... 61s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 61s Preparing to unpack .../python3-minimal_3.13.7-2_armhf.deb ... 61s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 61s Setting up python3-minimal (3.13.7-2) ... 61s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 61s Preparing to unpack .../00-python3_3.13.7-2_armhf.deb ... 62s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 62s Preparing to unpack .../01-libpython3-stdlib_3.13.7-2_armhf.deb ... 62s Unpacking libpython3-stdlib:armhf (3.13.7-2) over (3.13.7-1) ... 62s Preparing to unpack .../02-distro-info-data_0.67~ubuntu1_all.deb ... 62s Unpacking distro-info-data (0.67~ubuntu1) over (0.66) ... 62s Preparing to unpack .../03-libgirepository-1.0-1_1.86.0-6_armhf.deb ... 62s Unpacking libgirepository-1.0-1:armhf (1.86.0-6) over (1.84.0-1) ... 62s Preparing to unpack .../04-gir1.2-girepository-2.0_1.86.0-6_armhf.deb ... 62s Unpacking gir1.2-girepository-2.0:armhf (1.86.0-6) over (1.84.0-1) ... 62s Preparing to unpack .../05-libapparmor1_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 62s Unpacking libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 62s Preparing to unpack .../06-sudo-rs_0.2.8-1ubuntu5.1_armhf.deb ... 62s Unpacking sudo-rs (0.2.8-1ubuntu5.1) over (0.2.8-1ubuntu5) ... 62s Preparing to unpack .../07-apparmor_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 63s Unpacking apparmor (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 64s Preparing to unpack .../08-libctf0_2.45-7ubuntu2_armhf.deb ... 64s Unpacking libctf0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 64s Preparing to unpack .../09-libctf-nobfd0_2.45-7ubuntu2_armhf.deb ... 64s Unpacking libctf-nobfd0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 64s Preparing to unpack .../10-binutils-arm-linux-gnueabihf_2.45-7ubuntu2_armhf.deb ... 64s Unpacking binutils-arm-linux-gnueabihf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 64s Preparing to unpack .../11-libbinutils_2.45-7ubuntu2_armhf.deb ... 65s Unpacking libbinutils:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 65s Preparing to unpack .../12-binutils_2.45-7ubuntu2_armhf.deb ... 65s Unpacking binutils (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 65s Preparing to unpack .../13-binutils-common_2.45-7ubuntu2_armhf.deb ... 65s Unpacking binutils-common:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 65s Preparing to unpack .../14-libsframe2_2.45-7ubuntu2_armhf.deb ... 65s Unpacking libsframe2:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 65s Preparing to unpack .../15-cloud-init-base_25.3-0ubuntu1_all.deb ... 65s Unpacking cloud-init-base (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 65s Preparing to unpack .../16-cloud-init_25.3-0ubuntu1_all.deb ... 65s Unpacking cloud-init (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 65s Preparing to unpack .../17-lto-disabled-list_71_all.deb ... 65s Unpacking lto-disabled-list (71) over (69) ... 65s Setting up lto-disabled-list (71) ... 65s Setting up libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) ... 65s Setting up distro-info-data (0.67~ubuntu1) ... 65s Setting up libsframe2:armhf (2.45-7ubuntu2) ... 65s Setting up binutils-common:armhf (2.45-7ubuntu2) ... 65s Setting up libctf-nobfd0:armhf (2.45-7ubuntu2) ... 65s Setting up apparmor (5.0.0~alpha1-0ubuntu8.1) ... 65s Installing new version of config file /etc/apparmor.d/fusermount3 ... 65s apparmor_parser: Unable to replace "lsb_release". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 65s 65s apparmor_parser: Unable to replace "kmod". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 65s 65s apparmor_parser: Unable to replace "nvidia_modprobe". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 65s 66s Reloading AppArmor profiles 66s /sbin/apparmor_parser: Unable to replace "1password". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "Discord". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "MongoDB Compass". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "balena-etcher". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "brave". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "buildah". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "cam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "ch-checkns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "ch-run". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "chrome". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "bwrap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "chromium". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "vscode". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "crun". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "devhelp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "babeld". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "bfdd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "element-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "bgpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "epiphany". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "evolution". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "alsamixer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "firefox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "flatpak". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "foliate". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "geary". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "github-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "goldendict". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "dnstracer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "eigrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "fabricd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "dig". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "hostname". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "iotop-c". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "kchmviewer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "keybase". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "fusermount3". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "lc-compliance". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "libcamerify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "isisd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "linux-sandbox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "Xorg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "ipa_verify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "ldpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "john". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 66s /sbin/apparmor_parser: Unable to replace "loupe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 66s 67s /sbin/apparmor_parser: Unable to replace "gs". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lxc-attach". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lxc-create". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lxc-destroy". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lxc-execute". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lxc-stop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "linux-boot-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lxc-unshare". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lxc-usernsexec". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "mmdebstrap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "msedge". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lsusb". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lsblk". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "notepadqq". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "compressor". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "locale". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "lsb_release". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "irssi". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "obsidian". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "mosquitto". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "mbsync". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "opam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "opera". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "nhrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "notify-send". /sbin/apparmor_parser: Unable to replace "nslookup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "pageedit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "nc.openbsd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "kmod". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "nvidia_modprobe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ospf6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "os-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "pathd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ospfd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "pbrd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "podman". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "polypane". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "privacybrowser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "qcam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "plasmashell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "qmapshack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "qutebrowser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "pim6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "pimd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "rootlesskit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "rpm". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "rssguard". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "runc". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-abort". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-apt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-adduser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "qpdf". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-checkpackages". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ripd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-clean". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ripngd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-createchroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-hold". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-destroychroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-distupgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-shell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "scide". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "signal-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-unhold". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "slack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-update". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "slirp4netns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "sbuild-upgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "steam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "stress-ng". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "surfshark". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "systemd-coredump". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "thunderbird". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ssh-keyscan". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "openvpn". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "proftpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "systemd-detect-virt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "trinity". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "tup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "tinyproxy". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "tuxedo-control-center". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "staticd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "unprivileged_userns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "userbindmount". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "mx-extract". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "rygel". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "unix-chkpwd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_apt_news". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "/usr/bin/man". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "uwsgi-core". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "vdens". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "virtiofsd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "vivaldi-bin". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "vpnns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "/usr/sbin/chronyd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "vrrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "wg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "rsyslogd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "wike". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "wpcom". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "cmds". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "tnftp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "who". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "dumpcap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "tshark". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "wg-quick". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "znc". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "tcpdump". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "apt_methods". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_esm_cache". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s /sbin/apparmor_parser: Unable to replace "transmission-cli". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 67s 67s Error: At least one profile failed to load 67s Setting up libatomic1:armhf (15.2.0-5ubuntu1) ... 67s Setting up libgirepository-1.0-1:armhf (1.86.0-6) ... 67s Setting up libbinutils:armhf (2.45-7ubuntu2) ... 67s Setting up sudo-rs (0.2.8-1ubuntu5.1) ... 67s Setting up libpython3-stdlib:armhf (3.13.7-2) ... 67s Setting up libctf0:armhf (2.45-7ubuntu2) ... 67s Setting up python3 (3.13.7-2) ... 67s Setting up cloud-init-base (25.3-0ubuntu1) ... 70s Setting up gir1.2-girepository-2.0:armhf (1.86.0-6) ... 70s Setting up binutils-arm-linux-gnueabihf (2.45-7ubuntu2) ... 70s Setting up cloud-init (25.3-0ubuntu1) ... 70s Setting up binutils (2.45-7ubuntu2) ... 70s Processing triggers for plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu1) ... 70s Processing triggers for procps (2:4.0.4-8ubuntu3) ... 70s Processing triggers for install-info (7.1.1-1ubuntu1) ... 70s Processing triggers for libc-bin (2.42-0ubuntu3) ... 70s Processing triggers for rsyslog (8.2504.0-1ubuntu2) ... 70s Processing triggers for systemd (257.9-0ubuntu2) ... 70s Processing triggers for man-db (2.13.1-1) ... 76s Reading package lists... 76s Building dependency tree... 76s Reading state information... 76s Solving dependencies... 76s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 78s autopkgtest [18:12:17]: rebooting testbed after setup commands that affected boot 118s autopkgtest [18:12:57]: testbed running kernel: Linux 6.8.0-58-generic #60~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Fri Mar 28 14:48:37 UTC 2 142s autopkgtest [18:13:21]: @@@@@@@@@@@@@@@@@@@@ apt-source kmer 178s Get:1 http://ftpmaster.internal/ubuntu resolute/universe kmer 0~20150903+r2013-9build1 (dsc) [2395 B] 178s Get:2 http://ftpmaster.internal/ubuntu resolute/universe kmer 0~20150903+r2013-9build1 (tar) [1252 kB] 178s Get:3 http://ftpmaster.internal/ubuntu resolute/universe kmer 0~20150903+r2013-9build1 (diff) [2380 kB] 178s gpgv: Signature made Fri Jan 3 10:57:38 2025 UTC 178s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 178s gpgv: Can't check signature: No public key 178s dpkg-source: warning: cannot verify inline signature for ./kmer_0~20150903+r2013-9build1.dsc: no acceptable signature found 179s autopkgtest [18:13:58]: testing package kmer version 0~20150903+r2013-9build1 181s autopkgtest [18:14:00]: build not needed 184s autopkgtest [18:14:03]: test sim4db-unit-test: preparing testbed 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 186s Solving dependencies... 187s The following NEW packages will be installed: 187s adwaita-icon-theme aglfn at-spi2-common atac dconf-gsettings-backend 187s dconf-service fontconfig fontconfig-config fonts-dejavu-core 187s fonts-dejavu-mono gnuplot gnuplot-data gnuplot-qt gtk-update-icon-cache 187s hicolor-icon-theme kmer kmer-examples leaff libaom3 libatk-bridge2.0-0t64 187s libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data 187s libavahi-common3 libcairo-gobject2 libcairo2 libcolord2 libcups2t64 187s libdatrie1 libdconf1 libde265-0 libdeflate0 libdouble-conversion3 187s libdrm-amdgpu1 libegl-mesa0 libegl1 libepoxy0 libfile-which-perl 187s libfontconfig1 libfreetype6 libgbm1 libgd3 libgdk-pixbuf-2.0-0 187s libgdk-pixbuf2.0-common libgles2 libglvnd0 libgomp1 libgraphite2-3 187s libgtk-3-0t64 libgtk-3-common libgudev-1.0-0 libharfbuzz0b 187s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libice6 libicu76 187s libimagequant0 libinput-bin libinput10 libjbig0 libjpeg-turbo8 libjpeg8 187s libkmer-dev liblcms2-2 liblerc4 libllvm20 liblua5.4-0 libmd4c0 libmeryl-dev 187s libmtdev1t64 libnotify4 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 187s libpcre2-16-0 libpcre2-32-0 libpixman-1-0 libqt5core5t64 libqt5dbus5t64 187s libqt5gui5t64 libqt5network5t64 libqt5printsupport5t64 libqt5svg5 187s libqt5widgets5t64 libsharpyuv0 libsm6 libthai-data libthai0 libtiff6 187s libwacom-common libwacom9 libwayland-client0 libwayland-cursor0 187s libwayland-egl1 libwebp7 libwebpmux3 libwxbase3.2-1t64 libwxgtk3.2-1t64 187s libx11-xcb1 libxcb-dri3-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 187s libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 187s libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 187s libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcomposite1 libxcursor1 187s libxdamage1 libxfixes3 libxi6 libxinerama1 libxkbcommon-x11-0 libxpm4 187s libxrandr2 libxrender1 libxshmfence1 libxtst6 meryl mesa-libgallium sim4db 187s x11-common 187s 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. 187s Need to get 82.3 MB of archives. 187s After this operation, 301 MB of additional disk space will be used. 187s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf libgdk-pixbuf2.0-common all 2.42.12+dfsg-5 [8326 B] 187s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg-turbo8 armhf 2.1.5-4ubuntu2 [127 kB] 187s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 187s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate0 armhf 1.23-2 [38.7 kB] 187s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 188s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 188s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 188s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 188s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf libtiff6 armhf 4.7.0-3ubuntu3 [188 kB] 188s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.12+dfsg-5 [138 kB] 188s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf gtk-update-icon-cache armhf 4.20.1+ds-2 [53.7 kB] 188s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf hicolor-icon-theme all 0.18-2 [13.3 kB] 188s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf adwaita-icon-theme all 49.0-1 [581 kB] 188s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf at-spi2-common all 2.57.1-1 [9432 B] 188s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf libfile-which-perl all 1.27-2 [12.5 kB] 188s Get:16 http://ftpmaster.internal/ubuntu resolute/universe armhf leaff armhf 0~20150903+r2013-9build1 [67.7 kB] 188s Get:17 http://ftpmaster.internal/ubuntu resolute/universe armhf meryl armhf 0~20150903+r2013-9build1 [231 kB] 188s Get:18 http://ftpmaster.internal/ubuntu resolute/universe armhf aglfn all 1.7+git20191031.4036a9c-2 [30.6 kB] 188s Get:19 http://ftpmaster.internal/ubuntu resolute/universe armhf gnuplot-data all 6.0.2+dfsg1-2ubuntu1 [76.0 kB] 188s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libfreetype6 armhf 2.13.3+dfsg-1build1 [334 kB] 188s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 189s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 189s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf fontconfig-config armhf 2.15.0-2.3ubuntu1 [38.1 kB] 189s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf libfontconfig1 armhf 2.15.0-2.3ubuntu1 [114 kB] 189s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 189s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-render0 armhf 1.17.0-2build1 [15.5 kB] 189s Get:27 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-shm0 armhf 1.17.0-2build1 [5962 B] 189s Get:28 http://ftpmaster.internal/ubuntu resolute/main armhf libxrender1 armhf 1:0.9.12-1 [16.6 kB] 189s Get:29 http://ftpmaster.internal/ubuntu resolute/main armhf libcairo2 armhf 1.18.4-1build1 [489 kB] 189s Get:30 http://ftpmaster.internal/ubuntu resolute/main armhf libaom3 armhf 3.12.1-1 [1232 kB] 190s Get:31 http://ftpmaster.internal/ubuntu resolute/main armhf libheif-plugin-aomdec armhf 1.20.2-1 [11.5 kB] 190s Get:32 http://ftpmaster.internal/ubuntu resolute/main armhf libde265-0 armhf 1.0.16-1 [158 kB] 190s Get:33 http://ftpmaster.internal/ubuntu resolute/main armhf libheif-plugin-libde265 armhf 1.20.2-1 [13.3 kB] 190s Get:34 http://ftpmaster.internal/ubuntu resolute/main armhf libheif1 armhf 1.20.2-1 [556 kB] 190s Get:35 http://ftpmaster.internal/ubuntu resolute/main armhf libgomp1 armhf 15.2.0-5ubuntu1 [129 kB] 190s Get:36 http://ftpmaster.internal/ubuntu resolute/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 190s Get:37 http://ftpmaster.internal/ubuntu resolute/main armhf libxpm4 armhf 1:3.5.17-1build2 [30.1 kB] 190s Get:38 http://ftpmaster.internal/ubuntu resolute/main armhf libgd3 armhf 2.3.3-13ubuntu1 [109 kB] 190s Get:39 http://ftpmaster.internal/ubuntu resolute/main armhf liblua5.4-0 armhf 5.4.8-1 [134 kB] 190s Get:40 http://ftpmaster.internal/ubuntu resolute/main armhf fontconfig armhf 2.15.0-2.3ubuntu1 [190 kB] 190s Get:41 http://ftpmaster.internal/ubuntu resolute/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 190s Get:42 http://ftpmaster.internal/ubuntu resolute/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 190s Get:43 http://ftpmaster.internal/ubuntu resolute/main armhf libthai-data all 0.1.29-2build1 [158 kB] 190s Get:44 http://ftpmaster.internal/ubuntu resolute/main armhf libdatrie1 armhf 0.2.13-4 [15.9 kB] 190s Get:45 http://ftpmaster.internal/ubuntu resolute/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 190s Get:46 http://ftpmaster.internal/ubuntu resolute/main armhf libpango-1.0-0 armhf 1.56.3-1build1 [217 kB] 191s Get:47 http://ftpmaster.internal/ubuntu resolute/main armhf libpangoft2-1.0-0 armhf 1.56.3-1build1 [44.4 kB] 191s Get:48 http://ftpmaster.internal/ubuntu resolute/main armhf libpangocairo-1.0-0 armhf 1.56.3-1build1 [25.4 kB] 191s Get:49 http://ftpmaster.internal/ubuntu resolute/universe armhf libdouble-conversion3 armhf 3.3.1-1build1 [39.3 kB] 191s Get:50 http://ftpmaster.internal/ubuntu resolute/main armhf libicu76 armhf 76.1-4ubuntu2 [10.8 MB] 194s Get:51 http://ftpmaster.internal/ubuntu resolute/main armhf libpcre2-16-0 armhf 10.46-1 [206 kB] 194s Get:52 http://ftpmaster.internal/ubuntu resolute/universe armhf libqt5core5t64 armhf 5.15.17+dfsg-1ubuntu1 [1771 kB] 194s Get:53 http://ftpmaster.internal/ubuntu resolute/main armhf libglvnd0 armhf 1.7.0-1build2 [64.7 kB] 194s Get:54 http://ftpmaster.internal/ubuntu resolute/main armhf libdrm-amdgpu1 armhf 2.4.125-1 [19.5 kB] 194s Get:55 http://ftpmaster.internal/ubuntu resolute/main armhf libllvm20 armhf 1:20.1.8-0ubuntu4 [29.5 MB] 197s Get:56 http://ftpmaster.internal/ubuntu resolute/main armhf libx11-xcb1 armhf 2:1.8.12-1build1 [7920 B] 197s Get:57 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-dri3-0 armhf 1.17.0-2build1 [7350 B] 197s Get:58 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-present0 armhf 1.17.0-2build1 [6094 B] 197s Get:59 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-randr0 armhf 1.17.0-2build1 [16.9 kB] 197s Get:60 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-sync1 armhf 1.17.0-2build1 [8852 B] 197s Get:61 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-xfixes0 armhf 1.17.0-2build1 [10.2 kB] 197s Get:62 http://ftpmaster.internal/ubuntu resolute/main armhf libxshmfence1 armhf 1.3.3-1 [4948 B] 197s Get:63 http://ftpmaster.internal/ubuntu resolute/main armhf mesa-libgallium armhf 25.2.3-1ubuntu1 [8778 kB] 197s Get:64 http://ftpmaster.internal/ubuntu resolute/main armhf libgbm1 armhf 25.2.3-1ubuntu1 [30.0 kB] 197s Get:65 http://ftpmaster.internal/ubuntu resolute/main armhf libwayland-client0 armhf 1.24.0-1build1 [24.7 kB] 197s Get:66 http://ftpmaster.internal/ubuntu resolute/main armhf libegl-mesa0 armhf 25.2.3-1ubuntu1 [96.1 kB] 197s Get:67 http://ftpmaster.internal/ubuntu resolute/main armhf libegl1 armhf 1.7.0-1build2 [30.1 kB] 197s Get:68 http://ftpmaster.internal/ubuntu resolute/main armhf libgles2 armhf 1.7.0-1build2 [18.1 kB] 197s Get:69 http://ftpmaster.internal/ubuntu resolute/main armhf x11-common all 1:7.7+24ubuntu1 [22.4 kB] 197s Get:70 http://ftpmaster.internal/ubuntu resolute/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 197s Get:71 http://ftpmaster.internal/ubuntu resolute/main armhf libmtdev1t64 armhf 1.1.7-1 [13.0 kB] 197s Get:72 http://ftpmaster.internal/ubuntu resolute/main armhf libgudev-1.0-0 armhf 1:238-7 [13.9 kB] 197s Get:73 http://ftpmaster.internal/ubuntu resolute/main armhf libwacom-common all 2.16.1-1 [113 kB] 197s Get:74 http://ftpmaster.internal/ubuntu resolute/main armhf libwacom9 armhf 2.16.1-1 [24.7 kB] 197s Get:75 http://ftpmaster.internal/ubuntu resolute/main armhf libinput-bin armhf 1.28.1-1build1 [26.3 kB] 197s Get:76 http://ftpmaster.internal/ubuntu resolute/main armhf libinput10 armhf 1.28.1-1build1 [132 kB] 197s Get:77 http://ftpmaster.internal/ubuntu resolute/universe armhf libmd4c0 armhf 0.5.2-2 [38.2 kB] 197s Get:78 http://ftpmaster.internal/ubuntu resolute/universe armhf libqt5dbus5t64 armhf 5.15.17+dfsg-1ubuntu1 [197 kB] 197s Get:79 http://ftpmaster.internal/ubuntu resolute/universe armhf libqt5network5t64 armhf 5.15.17+dfsg-1ubuntu1 [653 kB] 197s Get:80 http://ftpmaster.internal/ubuntu resolute/main armhf libsm6 armhf 2:1.2.6-1 [15.3 kB] 197s Get:81 http://ftpmaster.internal/ubuntu resolute/universe armhf libxcb-icccm4 armhf 0.4.2-1 [9840 B] 197s Get:82 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-util1 armhf 0.4.1-1 [9468 B] 197s Get:83 http://ftpmaster.internal/ubuntu resolute/universe armhf libxcb-image0 armhf 0.4.0-2build1 [9680 B] 197s Get:84 http://ftpmaster.internal/ubuntu resolute/universe armhf libxcb-keysyms1 armhf 0.4.1-1 [8076 B] 198s Get:85 http://ftpmaster.internal/ubuntu resolute/universe armhf libxcb-render-util0 armhf 0.3.10-1 [9444 B] 198s Get:86 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-shape0 armhf 1.17.0-2build1 [6196 B] 198s Get:87 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-xinerama0 armhf 1.17.0-2build1 [5364 B] 198s Get:88 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-xinput0 armhf 1.17.0-2build1 [29.2 kB] 198s Get:89 http://ftpmaster.internal/ubuntu resolute/main armhf libxcb-xkb1 armhf 1.17.0-2build1 [28.4 kB] 198s Get:90 http://ftpmaster.internal/ubuntu resolute/main armhf libxkbcommon-x11-0 armhf 1.7.0-2.1 [13.9 kB] 198s Get:91 http://ftpmaster.internal/ubuntu resolute/universe armhf libqt5gui5t64 armhf 5.15.17+dfsg-1ubuntu1 [2968 kB] 198s Get:92 http://ftpmaster.internal/ubuntu resolute/main armhf libavahi-common-data armhf 0.8-16ubuntu3 [31.1 kB] 198s Get:93 http://ftpmaster.internal/ubuntu resolute/main armhf libavahi-common3 armhf 0.8-16ubuntu3 [20.4 kB] 198s Get:94 http://ftpmaster.internal/ubuntu resolute/main armhf libavahi-client3 armhf 0.8-16ubuntu3 [24.7 kB] 198s Get:95 http://ftpmaster.internal/ubuntu resolute/main armhf libcups2t64 armhf 2.4.12-0ubuntu3 [241 kB] 198s Get:96 http://ftpmaster.internal/ubuntu resolute/universe armhf libqt5widgets5t64 armhf 5.15.17+dfsg-1ubuntu1 [2258 kB] 198s Get:97 http://ftpmaster.internal/ubuntu resolute/universe armhf libqt5printsupport5t64 armhf 5.15.17+dfsg-1ubuntu1 [192 kB] 198s Get:98 http://ftpmaster.internal/ubuntu resolute/universe armhf libqt5svg5 armhf 5.15.17-1 [128 kB] 198s Get:99 http://ftpmaster.internal/ubuntu resolute/main armhf libwebpmux3 armhf 1.5.0-0.1 [22.4 kB] 198s Get:100 http://ftpmaster.internal/ubuntu resolute/main armhf libpcre2-32-0 armhf 10.46-1 [197 kB] 198s Get:101 http://ftpmaster.internal/ubuntu resolute/universe armhf libwxbase3.2-1t64 armhf 3.2.8+dfsg-2 [1009 kB] 198s Get:102 http://ftpmaster.internal/ubuntu resolute/main armhf libcairo-gobject2 armhf 1.18.4-1build1 [126 kB] 198s Get:103 http://ftpmaster.internal/ubuntu resolute/main armhf libatk1.0-0t64 armhf 2.57.1-1 [49.3 kB] 198s Get:104 http://ftpmaster.internal/ubuntu resolute/main armhf libxi6 armhf 2:1.8.2-1 [26.5 kB] 198s Get:105 http://ftpmaster.internal/ubuntu resolute/main armhf libatspi2.0-0t64 armhf 2.57.1-1 [76.2 kB] 198s Get:106 http://ftpmaster.internal/ubuntu resolute/main armhf libatk-bridge2.0-0t64 armhf 2.57.1-1 [60.5 kB] 198s Get:107 http://ftpmaster.internal/ubuntu resolute/main armhf liblcms2-2 armhf 2.16-2 [137 kB] 198s Get:108 http://ftpmaster.internal/ubuntu resolute/main armhf libcolord2 armhf 1.4.7-3build1 [132 kB] 198s Get:109 http://ftpmaster.internal/ubuntu resolute/main armhf libepoxy0 armhf 1.5.10-2 [192 kB] 198s Get:110 http://ftpmaster.internal/ubuntu resolute/main armhf libwayland-cursor0 armhf 1.24.0-1build1 [9966 B] 198s Get:111 http://ftpmaster.internal/ubuntu resolute/main armhf libwayland-egl1 armhf 1.24.0-1build1 [6082 B] 198s Get:112 http://ftpmaster.internal/ubuntu resolute/main armhf libxcomposite1 armhf 1:0.4.6-1 [6060 B] 198s Get:113 http://ftpmaster.internal/ubuntu resolute/main armhf libxfixes3 armhf 1:6.0.0-2build1 [9038 B] 198s Get:114 http://ftpmaster.internal/ubuntu resolute/main armhf libxcursor1 armhf 1:1.2.3-1 [18.0 kB] 198s Get:115 http://ftpmaster.internal/ubuntu resolute/main armhf libxdamage1 armhf 1:1.1.6-1build1 [5462 B] 198s Get:116 http://ftpmaster.internal/ubuntu resolute/main armhf libxinerama1 armhf 2:1.1.4-3build1 [5866 B] 198s Get:117 http://ftpmaster.internal/ubuntu resolute/main armhf libxrandr2 armhf 2:1.5.4-1 [15.8 kB] 198s Get:118 http://ftpmaster.internal/ubuntu resolute/main armhf libdconf1 armhf 0.40.0-5willsync1 [38.9 kB] 198s Get:119 http://ftpmaster.internal/ubuntu resolute/main armhf dconf-service armhf 0.40.0-5willsync1 [27.7 kB] 199s Get:120 http://ftpmaster.internal/ubuntu resolute/main armhf dconf-gsettings-backend armhf 0.40.0-5willsync1 [24.0 kB] 199s Get:121 http://ftpmaster.internal/ubuntu resolute/main armhf libgtk-3-common all 3.24.50-1ubuntu2 [1425 kB] 199s Get:122 http://ftpmaster.internal/ubuntu resolute/main armhf libgtk-3-0t64 armhf 3.24.50-1ubuntu2 [2762 kB] 199s Get:123 http://ftpmaster.internal/ubuntu resolute/main armhf libnotify4 armhf 0.8.6-2 [24.8 kB] 199s Get:124 http://ftpmaster.internal/ubuntu resolute/main armhf libxtst6 armhf 2:1.2.5-1 [11.0 kB] 199s Get:125 http://ftpmaster.internal/ubuntu resolute/universe armhf libwxgtk3.2-1t64 armhf 3.2.8+dfsg-2 [4449 kB] 199s Get:126 http://ftpmaster.internal/ubuntu resolute/universe armhf gnuplot-qt armhf 6.0.2+dfsg1-2ubuntu1 [1146 kB] 199s Get:127 http://ftpmaster.internal/ubuntu resolute/universe armhf gnuplot all 6.0.2+dfsg1-2ubuntu1 [3574 B] 199s Get:128 http://ftpmaster.internal/ubuntu resolute/universe armhf atac armhf 0~20150903+r2013-9build1 [396 kB] 199s Get:129 http://ftpmaster.internal/ubuntu resolute/universe armhf sim4db armhf 0~20150903+r2013-9build1 [430 kB] 199s Get:130 http://ftpmaster.internal/ubuntu resolute/universe armhf kmer all 0~20150903+r2013-9build1 [3832 B] 199s Get:131 http://ftpmaster.internal/ubuntu resolute/universe armhf kmer-examples all 0~20150903+r2013-9build1 [2351 kB] 200s Get:132 http://ftpmaster.internal/ubuntu resolute/universe armhf libmeryl-dev armhf 0~20150903+r2013-9build1 [67.4 kB] 200s Get:133 http://ftpmaster.internal/ubuntu resolute/universe armhf libkmer-dev armhf 0~20150903+r2013-9build1 [218 kB] 200s Fetched 82.3 MB in 13s (6496 kB/s) 200s Selecting previously unselected package libgdk-pixbuf2.0-common. 200s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 200s Preparing to unpack .../000-libgdk-pixbuf2.0-common_2.42.12+dfsg-5_all.deb ... 200s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-5) ... 200s Selecting previously unselected package libjpeg-turbo8:armhf. 201s Preparing to unpack .../001-libjpeg-turbo8_2.1.5-4ubuntu2_armhf.deb ... 201s Unpacking libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 201s Selecting previously unselected package libjpeg8:armhf. 201s Preparing to unpack .../002-libjpeg8_8c-2ubuntu11_armhf.deb ... 201s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 201s Selecting previously unselected package libdeflate0:armhf. 201s Preparing to unpack .../003-libdeflate0_1.23-2_armhf.deb ... 201s Unpacking libdeflate0:armhf (1.23-2) ... 201s Selecting previously unselected package libjbig0:armhf. 201s Preparing to unpack .../004-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 201s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 201s Selecting previously unselected package liblerc4:armhf. 201s Preparing to unpack .../005-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 201s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 201s Selecting previously unselected package libsharpyuv0:armhf. 201s Preparing to unpack .../006-libsharpyuv0_1.5.0-0.1_armhf.deb ... 201s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 201s Selecting previously unselected package libwebp7:armhf. 201s Preparing to unpack .../007-libwebp7_1.5.0-0.1_armhf.deb ... 201s Unpacking libwebp7:armhf (1.5.0-0.1) ... 201s Selecting previously unselected package libtiff6:armhf. 201s Preparing to unpack .../008-libtiff6_4.7.0-3ubuntu3_armhf.deb ... 201s Unpacking libtiff6:armhf (4.7.0-3ubuntu3) ... 201s Selecting previously unselected package libgdk-pixbuf-2.0-0:armhf. 201s Preparing to unpack .../009-libgdk-pixbuf-2.0-0_2.42.12+dfsg-5_armhf.deb ... 201s Unpacking libgdk-pixbuf-2.0-0:armhf (2.42.12+dfsg-5) ... 201s Selecting previously unselected package gtk-update-icon-cache. 201s Preparing to unpack .../010-gtk-update-icon-cache_4.20.1+ds-2_armhf.deb ... 201s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 201s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 201s Unpacking gtk-update-icon-cache (4.20.1+ds-2) ... 201s Selecting previously unselected package hicolor-icon-theme. 201s Preparing to unpack .../011-hicolor-icon-theme_0.18-2_all.deb ... 201s Unpacking hicolor-icon-theme (0.18-2) ... 201s Selecting previously unselected package adwaita-icon-theme. 201s Preparing to unpack .../012-adwaita-icon-theme_49.0-1_all.deb ... 201s Unpacking adwaita-icon-theme (49.0-1) ... 201s Selecting previously unselected package at-spi2-common. 201s Preparing to unpack .../013-at-spi2-common_2.57.1-1_all.deb ... 201s Unpacking at-spi2-common (2.57.1-1) ... 201s Selecting previously unselected package libfile-which-perl. 201s Preparing to unpack .../014-libfile-which-perl_1.27-2_all.deb ... 201s Unpacking libfile-which-perl (1.27-2) ... 201s Selecting previously unselected package leaff. 201s Preparing to unpack .../015-leaff_0~20150903+r2013-9build1_armhf.deb ... 201s Unpacking leaff (0~20150903+r2013-9build1) ... 201s Selecting previously unselected package meryl. 201s Preparing to unpack .../016-meryl_0~20150903+r2013-9build1_armhf.deb ... 201s Unpacking meryl (0~20150903+r2013-9build1) ... 201s Selecting previously unselected package aglfn. 201s Preparing to unpack .../017-aglfn_1.7+git20191031.4036a9c-2_all.deb ... 201s Unpacking aglfn (1.7+git20191031.4036a9c-2) ... 201s Selecting previously unselected package gnuplot-data. 201s Preparing to unpack .../018-gnuplot-data_6.0.2+dfsg1-2ubuntu1_all.deb ... 201s Unpacking gnuplot-data (6.0.2+dfsg1-2ubuntu1) ... 201s Selecting previously unselected package libfreetype6:armhf. 201s Preparing to unpack .../019-libfreetype6_2.13.3+dfsg-1build1_armhf.deb ... 201s Unpacking libfreetype6:armhf (2.13.3+dfsg-1build1) ... 201s Selecting previously unselected package fonts-dejavu-mono. 201s Preparing to unpack .../020-fonts-dejavu-mono_2.37-8_all.deb ... 201s Unpacking fonts-dejavu-mono (2.37-8) ... 202s Selecting previously unselected package fonts-dejavu-core. 202s Preparing to unpack .../021-fonts-dejavu-core_2.37-8_all.deb ... 202s Unpacking fonts-dejavu-core (2.37-8) ... 202s Selecting previously unselected package fontconfig-config. 202s Preparing to unpack .../022-fontconfig-config_2.15.0-2.3ubuntu1_armhf.deb ... 202s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 202s Selecting previously unselected package libfontconfig1:armhf. 202s Preparing to unpack .../023-libfontconfig1_2.15.0-2.3ubuntu1_armhf.deb ... 202s Unpacking libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 202s Selecting previously unselected package libpixman-1-0:armhf. 202s Preparing to unpack .../024-libpixman-1-0_0.44.0-3_armhf.deb ... 202s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 202s Selecting previously unselected package libxcb-render0:armhf. 202s Preparing to unpack .../025-libxcb-render0_1.17.0-2build1_armhf.deb ... 202s Unpacking libxcb-render0:armhf (1.17.0-2build1) ... 202s Selecting previously unselected package libxcb-shm0:armhf. 202s Preparing to unpack .../026-libxcb-shm0_1.17.0-2build1_armhf.deb ... 202s Unpacking libxcb-shm0:armhf (1.17.0-2build1) ... 202s Selecting previously unselected package libxrender1:armhf. 202s Preparing to unpack .../027-libxrender1_1%3a0.9.12-1_armhf.deb ... 202s Unpacking libxrender1:armhf (1:0.9.12-1) ... 202s Selecting previously unselected package libcairo2:armhf. 202s Preparing to unpack .../028-libcairo2_1.18.4-1build1_armhf.deb ... 202s Unpacking libcairo2:armhf (1.18.4-1build1) ... 202s Selecting previously unselected package libaom3:armhf. 202s Preparing to unpack .../029-libaom3_3.12.1-1_armhf.deb ... 202s Unpacking libaom3:armhf (3.12.1-1) ... 202s Selecting previously unselected package libheif-plugin-aomdec:armhf. 202s Preparing to unpack .../030-libheif-plugin-aomdec_1.20.2-1_armhf.deb ... 202s Unpacking libheif-plugin-aomdec:armhf (1.20.2-1) ... 202s Selecting previously unselected package libde265-0:armhf. 202s Preparing to unpack .../031-libde265-0_1.0.16-1_armhf.deb ... 202s Unpacking libde265-0:armhf (1.0.16-1) ... 202s Selecting previously unselected package libheif-plugin-libde265:armhf. 202s Preparing to unpack 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Unpacking libgd3:armhf (2.3.3-13ubuntu1) ... 203s Selecting previously unselected package liblua5.4-0:armhf. 203s Preparing to unpack .../038-liblua5.4-0_5.4.8-1_armhf.deb ... 203s Unpacking liblua5.4-0:armhf (5.4.8-1) ... 203s Selecting previously unselected package fontconfig. 203s Preparing to unpack .../039-fontconfig_2.15.0-2.3ubuntu1_armhf.deb ... 203s Unpacking fontconfig (2.15.0-2.3ubuntu1) ... 203s Selecting previously unselected package libgraphite2-3:armhf. 203s Preparing to unpack .../040-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 203s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 203s Selecting previously unselected package libharfbuzz0b:armhf. 203s Preparing to unpack .../041-libharfbuzz0b_10.2.0-1_armhf.deb ... 203s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 203s Selecting previously unselected package libthai-data. 203s Preparing to unpack .../042-libthai-data_0.1.29-2build1_all.deb ... 203s Unpacking libthai-data (0.1.29-2build1) ... 203s Selecting previously unselected package libdatrie1:armhf. 203s Preparing to unpack .../043-libdatrie1_0.2.13-4_armhf.deb ... 203s Unpacking libdatrie1:armhf (0.2.13-4) ... 203s Selecting previously unselected package libthai0:armhf. 203s Preparing to unpack .../044-libthai0_0.1.29-2build1_armhf.deb ... 203s Unpacking libthai0:armhf (0.1.29-2build1) ... 203s Selecting previously unselected package libpango-1.0-0:armhf. 203s Preparing to unpack .../045-libpango-1.0-0_1.56.3-1build1_armhf.deb ... 203s Unpacking libpango-1.0-0:armhf (1.56.3-1build1) ... 203s Selecting previously unselected package libpangoft2-1.0-0:armhf. 203s Preparing to unpack .../046-libpangoft2-1.0-0_1.56.3-1build1_armhf.deb ... 203s Unpacking libpangoft2-1.0-0:armhf (1.56.3-1build1) ... 203s Selecting previously unselected package libpangocairo-1.0-0:armhf. 203s Preparing to unpack .../047-libpangocairo-1.0-0_1.56.3-1build1_armhf.deb ... 203s Unpacking libpangocairo-1.0-0:armhf (1.56.3-1build1) ... 203s Selecting previously unselected package libdouble-conversion3:armhf. 203s Preparing to unpack .../048-libdouble-conversion3_3.3.1-1build1_armhf.deb ... 203s Unpacking libdouble-conversion3:armhf (3.3.1-1build1) ... 203s Selecting previously unselected package libicu76:armhf. 203s Preparing to unpack .../049-libicu76_76.1-4ubuntu2_armhf.deb ... 203s Unpacking libicu76:armhf (76.1-4ubuntu2) ... 203s Selecting previously unselected package libpcre2-16-0:armhf. 203s Preparing to unpack .../050-libpcre2-16-0_10.46-1_armhf.deb ... 203s Unpacking libpcre2-16-0:armhf (10.46-1) ... 203s Selecting previously unselected package libqt5core5t64:armhf. 203s Preparing to unpack .../051-libqt5core5t64_5.15.17+dfsg-1ubuntu1_armhf.deb ... 203s Unpacking libqt5core5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 204s Selecting previously unselected package libglvnd0:armhf. 204s Preparing to unpack .../052-libglvnd0_1.7.0-1build2_armhf.deb ... 204s Unpacking libglvnd0:armhf (1.7.0-1build2) ... 204s Selecting previously unselected package libdrm-amdgpu1:armhf. 204s Preparing to unpack .../053-libdrm-amdgpu1_2.4.125-1_armhf.deb ... 204s Unpacking libdrm-amdgpu1:armhf (2.4.125-1) ... 204s Selecting previously unselected package libllvm20:armhf. 204s Preparing to unpack .../054-libllvm20_1%3a20.1.8-0ubuntu4_armhf.deb ... 204s Unpacking libllvm20:armhf (1:20.1.8-0ubuntu4) ... 205s Selecting previously unselected package libx11-xcb1:armhf. 205s Preparing to unpack .../055-libx11-xcb1_2%3a1.8.12-1build1_armhf.deb ... 205s Unpacking libx11-xcb1:armhf (2:1.8.12-1build1) ... 205s Selecting previously unselected package libxcb-dri3-0:armhf. 205s Preparing to unpack .../056-libxcb-dri3-0_1.17.0-2build1_armhf.deb ... 205s Unpacking libxcb-dri3-0:armhf (1.17.0-2build1) ... 205s Selecting previously unselected package libxcb-present0:armhf. 205s Preparing to unpack .../057-libxcb-present0_1.17.0-2build1_armhf.deb ... 205s Unpacking libxcb-present0:armhf (1.17.0-2build1) ... 205s Selecting previously unselected package libxcb-randr0:armhf. 205s Preparing to unpack .../058-libxcb-randr0_1.17.0-2build1_armhf.deb ... 205s Unpacking libxcb-randr0:armhf (1.17.0-2build1) ... 205s Selecting previously unselected package libxcb-sync1:armhf. 205s Preparing to unpack .../059-libxcb-sync1_1.17.0-2build1_armhf.deb ... 205s Unpacking libxcb-sync1:armhf (1.17.0-2build1) ... 205s Selecting previously unselected package libxcb-xfixes0:armhf. 205s Preparing to unpack .../060-libxcb-xfixes0_1.17.0-2build1_armhf.deb ... 205s Unpacking libxcb-xfixes0:armhf (1.17.0-2build1) ... 205s Selecting previously unselected package libxshmfence1:armhf. 205s Preparing to unpack .../061-libxshmfence1_1.3.3-1_armhf.deb ... 205s Unpacking libxshmfence1:armhf (1.3.3-1) ... 205s Selecting previously unselected package mesa-libgallium:armhf. 205s Preparing to unpack .../062-mesa-libgallium_25.2.3-1ubuntu1_armhf.deb ... 205s Unpacking mesa-libgallium:armhf (25.2.3-1ubuntu1) ... 205s Selecting previously unselected package libgbm1:armhf. 205s Preparing to unpack .../063-libgbm1_25.2.3-1ubuntu1_armhf.deb ... 205s Unpacking libgbm1:armhf (25.2.3-1ubuntu1) ... 205s Selecting previously unselected package libwayland-client0:armhf. 205s Preparing to unpack .../064-libwayland-client0_1.24.0-1build1_armhf.deb ... 205s Unpacking libwayland-client0:armhf (1.24.0-1build1) ... 205s Selecting previously unselected package libegl-mesa0:armhf. 205s Preparing to unpack .../065-libegl-mesa0_25.2.3-1ubuntu1_armhf.deb ... 205s Unpacking libegl-mesa0:armhf (25.2.3-1ubuntu1) ... 205s Selecting previously unselected package libegl1:armhf. 205s Preparing to unpack .../066-libegl1_1.7.0-1build2_armhf.deb ... 205s Unpacking libegl1:armhf (1.7.0-1build2) ... 205s Selecting previously unselected package libgles2:armhf. 205s Preparing to unpack .../067-libgles2_1.7.0-1build2_armhf.deb ... 205s Unpacking libgles2:armhf (1.7.0-1build2) ... 205s Selecting previously unselected package x11-common. 205s Preparing to unpack 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Selecting previously unselected package libinput-bin. 206s Preparing to unpack .../074-libinput-bin_1.28.1-1build1_armhf.deb ... 206s Unpacking libinput-bin (1.28.1-1build1) ... 206s Selecting previously unselected package libinput10:armhf. 206s Preparing to unpack .../075-libinput10_1.28.1-1build1_armhf.deb ... 206s Unpacking libinput10:armhf (1.28.1-1build1) ... 206s Selecting previously unselected package libmd4c0:armhf. 206s Preparing to unpack .../076-libmd4c0_0.5.2-2_armhf.deb ... 206s Unpacking libmd4c0:armhf (0.5.2-2) ... 206s Selecting previously unselected package libqt5dbus5t64:armhf. 206s Preparing to unpack .../077-libqt5dbus5t64_5.15.17+dfsg-1ubuntu1_armhf.deb ... 206s Unpacking libqt5dbus5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 206s Selecting previously unselected package libqt5network5t64:armhf. 206s Preparing to unpack .../078-libqt5network5t64_5.15.17+dfsg-1ubuntu1_armhf.deb ... 206s Unpacking libqt5network5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 206s Selecting previously unselected package libsm6:armhf. 206s Preparing to unpack .../079-libsm6_2%3a1.2.6-1_armhf.deb ... 206s Unpacking libsm6:armhf (2:1.2.6-1) ... 206s Selecting previously unselected package libxcb-icccm4:armhf. 206s Preparing to unpack .../080-libxcb-icccm4_0.4.2-1_armhf.deb ... 206s Unpacking libxcb-icccm4:armhf (0.4.2-1) ... 206s Selecting previously unselected package libxcb-util1:armhf. 206s Preparing to unpack .../081-libxcb-util1_0.4.1-1_armhf.deb ... 206s Unpacking libxcb-util1:armhf (0.4.1-1) ... 206s Selecting previously unselected package libxcb-image0:armhf. 206s Preparing to unpack .../082-libxcb-image0_0.4.0-2build1_armhf.deb ... 206s Unpacking libxcb-image0:armhf (0.4.0-2build1) ... 206s Selecting previously unselected package libxcb-keysyms1:armhf. 206s Preparing to unpack .../083-libxcb-keysyms1_0.4.1-1_armhf.deb ... 206s Unpacking libxcb-keysyms1:armhf (0.4.1-1) ... 206s Selecting previously unselected package libxcb-render-util0:armhf. 206s Preparing to unpack .../084-libxcb-render-util0_0.3.10-1_armhf.deb ... 206s Unpacking libxcb-render-util0:armhf (0.3.10-1) ... 206s Selecting previously unselected package libxcb-shape0:armhf. 206s Preparing to unpack .../085-libxcb-shape0_1.17.0-2build1_armhf.deb ... 206s Unpacking libxcb-shape0:armhf (1.17.0-2build1) ... 206s Selecting previously unselected package libxcb-xinerama0:armhf. 206s Preparing to unpack .../086-libxcb-xinerama0_1.17.0-2build1_armhf.deb ... 206s Unpacking libxcb-xinerama0:armhf (1.17.0-2build1) ... 206s Selecting previously unselected package libxcb-xinput0:armhf. 206s Preparing to unpack .../087-libxcb-xinput0_1.17.0-2build1_armhf.deb ... 206s Unpacking libxcb-xinput0:armhf (1.17.0-2build1) ... 206s Selecting previously unselected package libxcb-xkb1:armhf. 206s Preparing to unpack .../088-libxcb-xkb1_1.17.0-2build1_armhf.deb ... 206s Unpacking libxcb-xkb1:armhf (1.17.0-2build1) ... 206s Selecting previously unselected package libxkbcommon-x11-0:armhf. 206s Preparing to unpack .../089-libxkbcommon-x11-0_1.7.0-2.1_armhf.deb ... 206s Unpacking libxkbcommon-x11-0:armhf (1.7.0-2.1) ... 206s Selecting previously unselected package libqt5gui5t64:armhf. 206s Preparing to unpack .../090-libqt5gui5t64_5.15.17+dfsg-1ubuntu1_armhf.deb ... 206s Unpacking libqt5gui5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 206s Selecting previously unselected package libavahi-common-data:armhf. 206s Preparing to unpack .../091-libavahi-common-data_0.8-16ubuntu3_armhf.deb ... 206s Unpacking libavahi-common-data:armhf (0.8-16ubuntu3) ... 206s Selecting previously unselected package libavahi-common3:armhf. 207s Preparing to unpack .../092-libavahi-common3_0.8-16ubuntu3_armhf.deb ... 207s Unpacking libavahi-common3:armhf (0.8-16ubuntu3) ... 207s Selecting previously unselected package libavahi-client3:armhf. 207s Preparing to unpack .../093-libavahi-client3_0.8-16ubuntu3_armhf.deb ... 207s Unpacking libavahi-client3:armhf (0.8-16ubuntu3) ... 207s Selecting previously unselected package libcups2t64:armhf. 207s Preparing to unpack .../094-libcups2t64_2.4.12-0ubuntu3_armhf.deb ... 207s Unpacking libcups2t64:armhf (2.4.12-0ubuntu3) ... 207s Selecting previously unselected package libqt5widgets5t64:armhf. 207s Preparing to unpack .../095-libqt5widgets5t64_5.15.17+dfsg-1ubuntu1_armhf.deb ... 207s Unpacking libqt5widgets5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 207s Selecting previously unselected package libqt5printsupport5t64:armhf. 207s Preparing to unpack .../096-libqt5printsupport5t64_5.15.17+dfsg-1ubuntu1_armhf.deb ... 207s Unpacking libqt5printsupport5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 207s Selecting previously unselected package libqt5svg5:armhf. 207s Preparing to unpack .../097-libqt5svg5_5.15.17-1_armhf.deb ... 207s Unpacking libqt5svg5:armhf (5.15.17-1) ... 207s Selecting previously unselected package libwebpmux3:armhf. 207s Preparing to unpack .../098-libwebpmux3_1.5.0-0.1_armhf.deb ... 207s Unpacking libwebpmux3:armhf (1.5.0-0.1) ... 207s Selecting previously unselected package libpcre2-32-0:armhf. 207s Preparing to unpack .../099-libpcre2-32-0_10.46-1_armhf.deb ... 207s Unpacking libpcre2-32-0:armhf (10.46-1) ... 207s Selecting previously unselected package libwxbase3.2-1t64:armhf. 207s Preparing to unpack .../100-libwxbase3.2-1t64_3.2.8+dfsg-2_armhf.deb ... 207s Unpacking libwxbase3.2-1t64:armhf (3.2.8+dfsg-2) ... 207s Selecting previously unselected package libcairo-gobject2:armhf. 207s Preparing to unpack .../101-libcairo-gobject2_1.18.4-1build1_armhf.deb ... 207s Unpacking libcairo-gobject2:armhf (1.18.4-1build1) ... 207s Selecting previously unselected package libatk1.0-0t64:armhf. 207s Preparing to unpack .../102-libatk1.0-0t64_2.57.1-1_armhf.deb ... 207s Unpacking libatk1.0-0t64:armhf (2.57.1-1) ... 207s Selecting previously unselected package libxi6:armhf. 207s Preparing to unpack .../103-libxi6_2%3a1.8.2-1_armhf.deb ... 207s Unpacking libxi6:armhf (2:1.8.2-1) ... 207s Selecting previously unselected package libatspi2.0-0t64:armhf. 207s Preparing to unpack .../104-libatspi2.0-0t64_2.57.1-1_armhf.deb ... 207s Unpacking libatspi2.0-0t64:armhf (2.57.1-1) ... 207s Selecting previously unselected package libatk-bridge2.0-0t64:armhf. 207s Preparing to unpack .../105-libatk-bridge2.0-0t64_2.57.1-1_armhf.deb ... 207s Unpacking libatk-bridge2.0-0t64:armhf (2.57.1-1) ... 207s Selecting previously unselected package liblcms2-2:armhf. 207s Preparing to unpack .../106-liblcms2-2_2.16-2_armhf.deb ... 207s Unpacking liblcms2-2:armhf (2.16-2) ... 207s Selecting previously unselected package libcolord2:armhf. 207s Preparing to unpack .../107-libcolord2_1.4.7-3build1_armhf.deb ... 207s Unpacking libcolord2:armhf (1.4.7-3build1) ... 207s Selecting previously unselected package libepoxy0:armhf. 207s Preparing to unpack .../108-libepoxy0_1.5.10-2_armhf.deb ... 207s Unpacking libepoxy0:armhf (1.5.10-2) ... 207s Selecting previously unselected package libwayland-cursor0:armhf. 207s Preparing to unpack .../109-libwayland-cursor0_1.24.0-1build1_armhf.deb ... 207s Unpacking libwayland-cursor0:armhf (1.24.0-1build1) ... 207s Selecting previously unselected package libwayland-egl1:armhf. 207s Preparing to unpack .../110-libwayland-egl1_1.24.0-1build1_armhf.deb ... 207s Unpacking libwayland-egl1:armhf (1.24.0-1build1) ... 207s Selecting previously unselected package libxcomposite1:armhf. 207s Preparing to unpack .../111-libxcomposite1_1%3a0.4.6-1_armhf.deb ... 207s Unpacking libxcomposite1:armhf (1:0.4.6-1) ... 207s Selecting previously unselected package libxfixes3:armhf. 207s Preparing to unpack .../112-libxfixes3_1%3a6.0.0-2build1_armhf.deb ... 207s Unpacking libxfixes3:armhf (1:6.0.0-2build1) ... 207s Selecting previously unselected package libxcursor1:armhf. 207s Preparing to unpack .../113-libxcursor1_1%3a1.2.3-1_armhf.deb ... 207s Unpacking libxcursor1:armhf (1:1.2.3-1) ... 207s Selecting previously unselected package libxdamage1:armhf. 207s Preparing to unpack .../114-libxdamage1_1%3a1.1.6-1build1_armhf.deb ... 207s Unpacking libxdamage1:armhf (1:1.1.6-1build1) ... 207s Selecting previously unselected package libxinerama1:armhf. 207s Preparing to unpack .../115-libxinerama1_2%3a1.1.4-3build1_armhf.deb ... 207s Unpacking libxinerama1:armhf (2:1.1.4-3build1) ... 207s Selecting previously unselected package libxrandr2:armhf. 207s Preparing to unpack .../116-libxrandr2_2%3a1.5.4-1_armhf.deb ... 207s Unpacking libxrandr2:armhf (2:1.5.4-1) ... 208s Selecting previously unselected package libdconf1:armhf. 208s Preparing to unpack .../117-libdconf1_0.40.0-5willsync1_armhf.deb ... 208s Unpacking libdconf1:armhf (0.40.0-5willsync1) ... 208s Selecting previously unselected package dconf-service. 208s Preparing to unpack .../118-dconf-service_0.40.0-5willsync1_armhf.deb ... 208s Unpacking dconf-service (0.40.0-5willsync1) ... 208s Selecting previously unselected package dconf-gsettings-backend:armhf. 208s Preparing to unpack .../119-dconf-gsettings-backend_0.40.0-5willsync1_armhf.deb ... 208s Unpacking dconf-gsettings-backend:armhf (0.40.0-5willsync1) ... 208s Selecting previously unselected package libgtk-3-common. 208s Preparing to unpack .../120-libgtk-3-common_3.24.50-1ubuntu2_all.deb ... 208s Unpacking libgtk-3-common (3.24.50-1ubuntu2) ... 208s Selecting previously unselected package libgtk-3-0t64:armhf. 208s Preparing to unpack .../121-libgtk-3-0t64_3.24.50-1ubuntu2_armhf.deb ... 208s Unpacking libgtk-3-0t64:armhf (3.24.50-1ubuntu2) ... 208s Selecting previously unselected package libnotify4:armhf. 208s Preparing to unpack .../122-libnotify4_0.8.6-2_armhf.deb ... 208s Unpacking libnotify4:armhf (0.8.6-2) ... 208s Selecting previously unselected package libxtst6:armhf. 208s Preparing to unpack .../123-libxtst6_2%3a1.2.5-1_armhf.deb ... 208s Unpacking libxtst6:armhf (2:1.2.5-1) ... 208s Selecting previously unselected package libwxgtk3.2-1t64:armhf. 208s Preparing to unpack .../124-libwxgtk3.2-1t64_3.2.8+dfsg-2_armhf.deb ... 208s Unpacking libwxgtk3.2-1t64:armhf (3.2.8+dfsg-2) ... 208s Selecting previously unselected package gnuplot-qt. 208s Preparing to unpack .../125-gnuplot-qt_6.0.2+dfsg1-2ubuntu1_armhf.deb ... 208s Unpacking gnuplot-qt (6.0.2+dfsg1-2ubuntu1) ... 208s Selecting previously unselected package gnuplot. 208s Preparing to unpack .../126-gnuplot_6.0.2+dfsg1-2ubuntu1_all.deb ... 208s Unpacking gnuplot (6.0.2+dfsg1-2ubuntu1) ... 208s Selecting previously unselected package atac. 208s Preparing to unpack .../127-atac_0~20150903+r2013-9build1_armhf.deb ... 208s Unpacking atac (0~20150903+r2013-9build1) ... 208s Selecting previously unselected package sim4db. 208s Preparing to unpack .../128-sim4db_0~20150903+r2013-9build1_armhf.deb ... 208s Unpacking sim4db (0~20150903+r2013-9build1) ... 208s Selecting previously unselected package kmer. 208s Preparing to unpack .../129-kmer_0~20150903+r2013-9build1_all.deb ... 208s Unpacking kmer (0~20150903+r2013-9build1) ... 208s Selecting previously unselected package kmer-examples. 208s Preparing to unpack .../130-kmer-examples_0~20150903+r2013-9build1_all.deb ... 208s Unpacking kmer-examples (0~20150903+r2013-9build1) ... 209s Selecting previously unselected package libmeryl-dev. 209s Preparing to unpack .../131-libmeryl-dev_0~20150903+r2013-9build1_armhf.deb ... 209s Unpacking libmeryl-dev (0~20150903+r2013-9build1) ... 209s Selecting previously unselected package libkmer-dev. 209s Preparing to unpack .../132-libkmer-dev_0~20150903+r2013-9build1_armhf.deb ... 209s Unpacking libkmer-dev (0~20150903+r2013-9build1) ... 209s Setting up libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 209s Setting up libxcb-dri3-0:armhf (1.17.0-2build1) ... 209s Setting up liblcms2-2:armhf (2.16-2) ... 209s Setting up libpixman-1-0:armhf (0.44.0-3) ... 209s Setting up leaff (0~20150903+r2013-9build1) ... 209s Setting up libsharpyuv0:armhf (1.5.0-0.1) ... 209s Setting up libaom3:armhf (3.12.1-1) ... 209s Setting up libx11-xcb1:armhf (2:1.8.12-1build1) ... 209s Setting up libfile-which-perl (1.27-2) ... 209s Setting up libdouble-conversion3:armhf (3.3.1-1build1) ... 209s Setting up libxdamage1:armhf (1:1.1.6-1build1) ... 209s Setting up libxcb-xfixes0:armhf (1.17.0-2build1) ... 209s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 209s Setting up libxpm4:armhf (1:3.5.17-1build2) ... 209s Setting up hicolor-icon-theme (0.18-2) ... 209s Setting up libxi6:armhf (2:1.8.2-1) ... 209s Setting up libxcb-xinput0:armhf (1.17.0-2build1) ... 209s Setting up libxrender1:armhf (1:0.9.12-1) ... 209s Setting up libdatrie1:armhf (0.2.13-4) ... 209s Setting up libxcb-render0:armhf (1.17.0-2build1) ... 209s Setting up libglvnd0:armhf (1.7.0-1build2) ... 209s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-5) ... 209s Setting up libxcb-keysyms1:armhf (0.4.1-1) ... 209s Setting up libxcb-shape0:armhf (1.17.0-2build1) ... 209s Setting up x11-common (1:7.7+24ubuntu1) ... 209s Setting up libdeflate0:armhf (1.23-2) ... 209s Setting up libxcb-render-util0:armhf (0.3.10-1) ... 209s Setting up libxcb-shm0:armhf (1.17.0-2build1) ... 209s Setting up libxcb-icccm4:armhf (0.4.2-1) ... 209s Setting up sim4db (0~20150903+r2013-9build1) ... 209s Setting up libgomp1:armhf (15.2.0-5ubuntu1) ... 209s Setting up kmer-examples (0~20150903+r2013-9build1) ... 209s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 209s Setting up libpcre2-16-0:armhf (10.46-1) ... 209s Setting up libcolord2:armhf (1.4.7-3build1) ... 209s Setting up libxcb-util1:armhf (0.4.1-1) ... 209s Setting up libxcb-xkb1:armhf (1.17.0-2build1) ... 209s Setting up libxcb-image0:armhf (0.4.0-2build1) ... 209s Setting up libxcb-present0:armhf (1.17.0-2build1) ... 209s Setting up libdconf1:armhf (0.40.0-5willsync1) ... 209s Setting up libpcre2-32-0:armhf (10.46-1) ... 209s Setting up libxcb-xinerama0:armhf (1.17.0-2build1) ... 209s Setting up libgles2:armhf (1.7.0-1build2) ... 209s Setting up libfreetype6:armhf (2.13.3+dfsg-1build1) ... 209s Setting up libepoxy0:armhf (1.5.10-2) ... 209s Setting up libxfixes3:armhf (1:6.0.0-2build1) ... 209s Setting up libxcb-sync1:armhf (1.17.0-2build1) ... 209s Setting up aglfn (1.7+git20191031.4036a9c-2) ... 209s Setting up libavahi-common-data:armhf (0.8-16ubuntu3) ... 209s Setting up libatspi2.0-0t64:armhf (2.57.1-1) ... 209s Setting up libxinerama1:armhf (2:1.1.4-3build1) ... 209s Setting up libimagequant0:armhf (2.18.0-1build1) ... 209s Setting up libxkbcommon-x11-0:armhf (1.7.0-2.1) ... 209s Setting up fonts-dejavu-mono (2.37-8) ... 209s Setting up libxrandr2:armhf (2:1.5.4-1) ... 209s Setting up libmeryl-dev (0~20150903+r2013-9build1) ... 209s Setting up libllvm20:armhf (1:20.1.8-0ubuntu4) ... 209s Setting up fonts-dejavu-core (2.37-8) ... 209s Setting up libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 209s Setting up libwebp7:armhf (1.5.0-0.1) ... 209s Setting up libmtdev1t64:armhf (1.1.7-1) ... 209s Setting up libxshmfence1:armhf (1.3.3-1) ... 209s Setting up at-spi2-common (2.57.1-1) ... 209s Setting up libxcb-randr0:armhf (1.17.0-2build1) ... 209s Setting up libmd4c0:armhf (0.5.2-2) ... 209s Setting up liblua5.4-0:armhf (5.4.8-1) ... 209s Setting up libharfbuzz0b:armhf (10.2.0-1) ... 209s Setting up libthai-data (0.1.29-2build1) ... 209s Setting up libwayland-egl1:armhf (1.24.0-1build1) ... 209s Setting up libicu76:armhf (76.1-4ubuntu2) ... 209s Setting up libwxbase3.2-1t64:armhf (3.2.8+dfsg-2) ... 209s Setting up libde265-0:armhf (1.0.16-1) ... 209s Setting up meryl (0~20150903+r2013-9build1) ... 209s Setting up libwebpmux3:armhf (1.5.0-0.1) ... 209s Setting up libxcomposite1:armhf (1:0.4.6-1) ... 209s Setting up libgudev-1.0-0:armhf (1:238-7) ... 209s Setting up libdrm-amdgpu1:armhf (2.4.125-1) ... 209s Setting up libwacom-common (2.16.1-1) ... 209s Setting up libwayland-client0:armhf (1.24.0-1build1) ... 209s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 209s Setting up gnuplot-data (6.0.2+dfsg1-2ubuntu1) ... 209s Setting up libice6:armhf (2:1.1.1-1) ... 209s Setting up mesa-libgallium:armhf (25.2.3-1ubuntu1) ... 209s Setting up libatk1.0-0t64:armhf (2.57.1-1) ... 209s Setting up libgbm1:armhf (25.2.3-1ubuntu1) ... 209s Setting up libwacom9:armhf (2.16.1-1) ... 209s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 210s Setting up libxtst6:armhf (2:1.2.5-1) ... 210s Setting up libxcursor1:armhf (1:1.2.3-1) ... 210s Setting up libavahi-common3:armhf (0.8-16ubuntu3) ... 210s Setting up dconf-service (0.40.0-5willsync1) ... 210s Setting up libinput-bin (1.28.1-1build1) ... 210s Setting up libthai0:armhf (0.1.29-2build1) ... 210s Setting up libqt5core5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 210s Setting up libegl-mesa0:armhf (25.2.3-1ubuntu1) ... 210s Setting up libkmer-dev (0~20150903+r2013-9build1) ... 210s Setting up libtiff6:armhf (4.7.0-3ubuntu3) ... 210s Setting up libwayland-cursor0:armhf (1.24.0-1build1) ... 210s Setting up libegl1:armhf (1.7.0-1build2) ... 210s Setting up libgdk-pixbuf-2.0-0:armhf (2.42.12+dfsg-5) ... 210s Setting up libfontconfig1:armhf (2.15.0-2.3ubuntu1) ... 210s Setting up libsm6:armhf (2:1.2.6-1) ... 210s Setting up libavahi-client3:armhf (0.8-16ubuntu3) ... 210s Setting up libatk-bridge2.0-0t64:armhf (2.57.1-1) ... 210s Setting up libinput10:armhf (1.28.1-1build1) ... 210s Setting up gtk-update-icon-cache (4.20.1+ds-2) ... 210s Setting up fontconfig (2.15.0-2.3ubuntu1) ... 212s Regenerating fonts cache... done. 212s Setting up libqt5dbus5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 212s Setting up dconf-gsettings-backend:armhf (0.40.0-5willsync1) ... 212s Setting up libpango-1.0-0:armhf (1.56.3-1build1) ... 212s Setting up libqt5network5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 212s Setting up libcairo2:armhf (1.18.4-1build1) ... 212s Setting up libqt5gui5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 212s Setting up adwaita-icon-theme (49.0-1) ... 212s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 212s Setting up libnotify4:armhf (0.8.6-2) ... 212s Setting up libcairo-gobject2:armhf (1.18.4-1build1) ... 212s Setting up libpangoft2-1.0-0:armhf (1.56.3-1build1) ... 212s Setting up libcups2t64:armhf (2.4.12-0ubuntu3) ... 212s Setting up libgtk-3-common (3.24.50-1ubuntu2) ... 212s Setting up libpangocairo-1.0-0:armhf (1.56.3-1build1) ... 212s Setting up libqt5widgets5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 212s Setting up libqt5svg5:armhf (5.15.17-1) ... 212s Setting up libqt5printsupport5t64:armhf (5.15.17+dfsg-1ubuntu1) ... 212s Setting up libheif-plugin-aomdec:armhf (1.20.2-1) ... 212s Setting up libheif-plugin-libde265:armhf (1.20.2-1) ... 212s Setting up libheif1:armhf (1.20.2-1) ... 212s Setting up libgd3:armhf (2.3.3-13ubuntu1) ... 212s Processing triggers for udev (257.9-0ubuntu2) ... 212s Processing triggers for libc-bin (2.42-0ubuntu3) ... 212s Processing triggers for man-db (2.13.1-1) ... 213s Processing triggers for libglib2.0-0t64:armhf (2.86.0-2) ... 213s Setting up libgtk-3-0t64:armhf (3.24.50-1ubuntu2) ... 213s Setting up libwxgtk3.2-1t64:armhf (3.2.8+dfsg-2) ... 213s Setting up gnuplot-qt (6.0.2+dfsg1-2ubuntu1) ... 213s update-alternatives: using /usr/bin/gnuplot-qt to provide /usr/bin/gnuplot (gnuplot) in auto mode 213s Setting up gnuplot (6.0.2+dfsg1-2ubuntu1) ... 213s Setting up atac (0~20150903+r2013-9build1) ... 213s Setting up kmer (0~20150903+r2013-9build1) ... 213s Processing triggers for libc-bin (2.42-0ubuntu3) ... 234s autopkgtest [18:14:53]: test sim4db-unit-test: [----------------------- 236s Testing sim4 for intra-species alignment... 236s 237s Testing sim4cc for inter-species alignment... 237s 240s RESULTS: OK 240s 241s autopkgtest [18:15:00]: test sim4db-unit-test: -----------------------] 246s autopkgtest [18:15:05]: test sim4db-unit-test: - - - - - - - - - - results - - - - - - - - - - 246s sim4db-unit-test PASS 250s autopkgtest [18:15:09]: test atac-unit-test: preparing testbed 252s Reading package lists... 252s Building dependency tree... 252s Reading state information... 252s Solving dependencies... 253s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 274s autopkgtest [18:15:33]: test atac-unit-test: [----------------------- 276s Rewriting '/tmp/autopkgtest.29NFmB/autopkgtest_tmp/GCF_000195855.1_ASM19585v1_genomic.fna' to '/tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.fasta', removing newlines. 276s Rewriting '/tmp/autopkgtest.29NFmB/autopkgtest_tmp/GCF_000195955.2_ASM19595v2_genomic.fna' to '/tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.fasta', removing newlines. 276s 276s /usr/bin/meryl -B -C -threads 2 -m 20 -s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.fasta -o /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.ms20 276s 277s 277s /usr/bin/meryl -v -M lessthanorequal 1 -s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.ms20 -o /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.ms20.le1 277s 278s 278s /usr/bin/meryl -B -C -threads 2 -m 20 -s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.fasta -o /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.ms20 278s 279s 279s /usr/bin/meryl -v -M lessthanorequal 1 -s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.ms20 -o /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.ms20.le1 279s 280s Finding the min count between Lepr.ms20.le1 and Tuber.ms20.le1. 280s 280s /usr/bin/meryl -M min -s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.ms20.le1 -s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.ms20.le1 -o /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/min.Lepr.ms20.le1.Tuber.ms20.le1 280s 280s includeSize is proportional to 1048608. 280s excludeSize is proportional to 15724920. 280s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/min.Lepr.ms20.le1.Tuber.ms20.le1 has 33265 mers. 280s /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.ms20 has 3268184 mers. 280s includeSize is exactly 33265 mers. 280s excludeSize is exactly 3234919 mers. 280s 280s /usr/bin/../lib/atac/bin/seatac -verbose -mersize 20 -minlength 20 -maxgap 0 -numthreads 4 -table /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.fasta -stream /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.fasta -only /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.include -output /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber-segment-000.matches -filtername /usr/bin/../lib/atac/lib/filter-heavychains.so -filteropts "-1 Lepr -2 Tuber -S 100 -J 100000" > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber-000.out 2>&1 280s 283s 283s /usr/bin/../lib/atac/bin/matchExtender /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.header /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber-segment-000.matches > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended 283s 283s WARNING: TMPDIR not set, defaulting to '/tmp/autopkgtest.29NFmB/autopkgtest_tmp/results'. 283s 283s python3 /usr/bin/../lib/atac/bin/AtacDriver.py /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended 283s 283s Read checkpoint in 0 seconds. 283s Creating /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Lepr.fasta.idxStore 283s Creating /tmp/autopkgtest.29NFmB/autopkgtest_tmp/meryldir/Tuber.fasta.idxStore 283s We need to make the raw matches. 283s runName = /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended 283s 283s Keep step=0 283s At step=0 283s Time elapsed=0.0003609657287597656 283s At uniqueFilter, step=1 283s Time elapsed=0.00037550926208496094 283s Running UniqueFilter 283s sort -T . -k 1,1 -k 2,2 -k 3n -k 4nr /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/tmpogaowjyg > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/tmp5tjzyd68 283s time elapsed is 0.005213737487792969 283s time elapsed is 0.00013208389282226562 283s sort -T . -k 1,1 -k 2,2 -k 3n -k 4nr /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/tmp4mcuorbv > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/tmpmhlszd9m 283s time elapsed is 0.005272626876831055 283s time elapsed is 9.465217590332031e-05 283s At filterByMatchLength, step=2 283s Time elapsed=0.4880962371826172 283s Running filterByMatchLength 283s At trimMatchOverlaps, step=3 283s Time elapsed=0.48858070373535156 283s Start trimming for bp one-to-one-ness 283s trimMatchOverlapsInX: 283s #posgaps, #abuts, #overlaps, #contained, bp_trimmed= 0 0 0 0 0 283s 283s trimMatchOverlapsInY: 283s #posgaps, #abuts, #overlaps, #contained, bp_trimmed= 0 0 0 0 0 283s 283s Finished trimming for bp one-to-one-ness 283s At formPerfectRuns, step=4 283s Time elapsed=0.5714190006256104 283s from /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.uniq.t40.trim making /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.uniq.t40.trim.p6 283s formPerfectRuns step=0 283s formPerfectRuns step=1 283s formPerfectRuns step=2 283s formPerfectRuns step=3 283s At onlyKeepLongRuns, step=5 283s Time elapsed=0.6483035087585449 283s from /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.uniq.t40.trim.p6 making /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.uniq.t40.trim.p6.l100 283s At formPerfectRuns, step=6 283s Time elapsed=0.6488940715789795 283s Heal the perfect runs 283s formPerfectRuns step=0 283s formPerfectRuns step=1 283s formPerfectRuns step=2 284s formPerfectRuns step=3 284s At squeezeIntraRunGaps, step=7 284s Time elapsed=0.7426631450653076 284s from /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.uniq.t40.trim.p6.l100.pr to /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.uniq.t40.trim.p6.l100.pr.sq 284s countLines 0 inter_run_gap_count 0 closed_gap_count 0 squeezed 0 x_len 0 y_len 0 x_nonACGT 0 y_nonACGT 0 284s theIsolatedSNPcount = 0 284s completefillednotXY = 0 284s completefilledXnotY = 0 284s completefilledYnotX = 0 284s completefilledXandY = 0 284s At TrimMatchOverlaps, step=8 284s Time elapsed=0.7432739734649658 284s Start trimming for bp one-to-one-ness 284s trimMatchOverlapsInX: 284s #posgaps, #abuts, #overlaps, #contained, bp_trimmed= 0 0 0 0 0 284s 284s trimMatchOverlapsInY: 284s #posgaps, #abuts, #overlaps, #contained, bp_trimmed= 0 0 0 0 0 284s 284s Finished trimming for bp one-to-one-ness 284s At RunsAsMatches, step=9 284s Time elapsed=0.8151125907897949 284s At fillIntraRunGaps, step=10 284s Time elapsed=0.8156716823577881 284s fill the intrarun gaps 284s begin 284s countLines=0 284s countLines 0 inter_run_gap_count 0 284s At TrimMatchOverlaps, step=11 284s Time elapsed=0.816173791885376 284s trim the overlaps 284s trimMatchOverlapsInX: 284s #posgaps, #abuts, #overlaps, #contained, bp_trimmed= 0 0 0 0 0 284s 284s trimMatchOverlapsInY: 284s #posgaps, #abuts, #overlaps, #contained, bp_trimmed= 0 0 0 0 0 284s 284s Ran in 0 seconds. 284s 284s /usr/bin/../lib/atac/bin/correctGaps -m /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.chained.atac -l /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.chained.gapsclosed.log > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/work/LeprvsTuber.matches.extended.chained.gapsclosed.atac 284s 284s 284s cd /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results && /usr/bin/../lib/atac/bin/clumpMaker -c 5000 -1 -f /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.atac > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.ref=Lepr.clumpCost=5000.atac 284s 284s 1 load the matches 284s 2 sort the matches 284s 3 score the matches 284s 4 mark clumps 284s 5 sort the matches 284s 6 output matches with clumps 284s 284s cd /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results && /usr/bin/../lib/atac/bin/clumpMaker -c 5000 -2 -f /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.atac > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.ref=Tuber.clumpCost=5000.atac 284s 284s 1 load the matches 284s 2 sort the matches 284s 3 score the matches 284s 4 mark clumps 284s 5 sort the matches 284s 6 output matches with clumps 284s 284s /usr/bin/../lib/atac/bin/statsGenerator -a /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.atac -p /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/stats/LeprvsTuber -g A > /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/stats/LeprvsTuber.stats 284s 284s 284s perl /usr/bin/../lib/atac/bin/makeplot.pl u /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.atac /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/stats/LeprvsTuber.matches.png 284s 284s 284s replot 284s ^ 284s "/tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/stats/LeprvsTuber.matches.gp" line 24: no previous plot 284s 284s 284s perl /usr/bin/../lib/atac/bin/makeplot.pl r /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.atac /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/stats/LeprvsTuber.runs.png 284s 284s 284s replot 284s ^ 284s "/tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/stats/LeprvsTuber.runs.gp" line 24: no previous plot 284s 284s RESULTS: OK 284s 284s 284s Finished! Output is: 284s matches and runs -- /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.atac 284s clumps -- /tmp/autopkgtest.29NFmB/autopkgtest_tmp/results/LeprvsTuber.*clump*.atac 285s autopkgtest [18:15:44]: test atac-unit-test: -----------------------] 288s autopkgtest [18:15:47]: test atac-unit-test: - - - - - - - - - - results - - - - - - - - - - 288s atac-unit-test PASS 292s autopkgtest [18:15:51]: @@@@@@@@@@@@@@@@@@@@ summary 292s sim4db-unit-test PASS 292s atac-unit-test PASS