0s autopkgtest [03:50:04]: starting date and time: 2026-02-05 03:50:04+0000 0s autopkgtest [03:50:04]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [03:50:04]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1z91her9/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade hts-nim-tools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.42-2ubuntu5 -- lxd -r lxd-armhf-10.145.243.107 lxd-armhf-10.145.243.107:autopkgtest/ubuntu/resolute/armhf 27s autopkgtest [03:50:31]: testbed dpkg architecture: armhf 29s autopkgtest [03:50:33]: testbed apt version: 3.1.14 33s autopkgtest [03:50:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 35s autopkgtest [03:50:39]: testbed release detected to be: None 43s autopkgtest [03:50:47]: updating testbed package index (apt update) 45s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 45s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 46s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 46s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 46s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [227 kB] 46s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [35.4 kB] 46s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1719 kB] 46s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5260 B] 46s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [250 kB] 46s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [1364 kB] 46s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [9664 B] 46s Fetched 3735 kB in 1s (2710 kB/s) 48s Reading package lists... 54s autopkgtest [03:50:58]: upgrading testbed (apt dist-upgrade and autopurge) 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 57s Calculating upgrade... 57s The following packages will be upgraded: 57s libc-bin libc-gconv-modules-extra libc6 locales 57s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 57s Need to get 7850 kB of archives. 57s After this operation, 0 B of additional disk space will be used. 57s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc-gconv-modules-extra armhf 2.42-2ubuntu5 [1417 kB] 58s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc6 armhf 2.42-2ubuntu5 [1632 kB] 58s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc-bin armhf 2.42-2ubuntu5 [545 kB] 58s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf locales all 2.42-2ubuntu5 [4255 kB] 59s Preconfiguring packages ... 60s Fetched 7850 kB in 1s (5477 kB/s) 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 60s Preparing to unpack .../libc-gconv-modules-extra_2.42-2ubuntu5_armhf.deb ... 60s Unpacking libc-gconv-modules-extra:armhf (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 60s Setting up libc-gconv-modules-extra:armhf (2.42-2ubuntu5) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 60s Preparing to unpack .../libc6_2.42-2ubuntu5_armhf.deb ... 60s readlink: /usr/lib/libeatmydata: No such file or directory 60s Unpacking libc6:armhf (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 60s Setting up libc6:armhf (2.42-2ubuntu5) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 60s Preparing to unpack .../libc-bin_2.42-2ubuntu5_armhf.deb ... 60s Unpacking libc-bin (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 60s Setting up libc-bin (2.42-2ubuntu5) ... 61s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 61s Preparing to unpack .../locales_2.42-2ubuntu5_all.deb ... 61s Unpacking locales (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 61s Setting up locales (2.42-2ubuntu5) ... 62s Generating locales (this might take a while)... 64s en_US.UTF-8... done 64s Generation complete. 64s Processing triggers for systemd (259-1ubuntu3) ... 65s Processing triggers for man-db (2.13.1-1) ... 68s Reading package lists... 68s Building dependency tree... 68s Reading state information... 68s Solving dependencies... 69s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 71s autopkgtest [03:51:15]: rebooting testbed after setup commands that affected boot 114s autopkgtest [03:51:58]: testbed running kernel: Linux 6.8.0-87-generic #88~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 14 14:00:09 UTC 2 139s autopkgtest [03:52:23]: @@@@@@@@@@@@@@@@@@@@ apt-source hts-nim-tools 149s Get:1 http://ftpmaster.internal/ubuntu resolute/universe hts-nim-tools 0.2.1-4 (dsc) [1666 B] 149s Get:2 http://ftpmaster.internal/ubuntu resolute/universe hts-nim-tools 0.2.1-4 (tar) [6803 B] 149s Get:3 http://ftpmaster.internal/ubuntu resolute/universe hts-nim-tools 0.2.1-4 (diff) [3712 B] 150s gpgv: Signature made Fri Sep 26 06:27:29 2025 UTC 150s gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA 150s gpgv: issuer "nilesh@debian.org" 150s gpgv: Can't check signature: No public key 150s dpkg-source: warning: cannot verify inline signature for ./hts-nim-tools_0.2.1-4.dsc: no acceptable signature found 150s autopkgtest [03:52:34]: testing package hts-nim-tools version 0.2.1-4 152s autopkgtest [03:52:36]: build not needed 154s autopkgtest [03:52:38]: test run-unit-test: preparing testbed 155s Reading package lists... 156s Building dependency tree... 156s Reading state information... 156s Solving dependencies... 156s The following NEW packages will be installed: 156s comerr-dev hts-nim-tools krb5-multidev libbrotli-dev libbz2-dev libc-dev-bin 156s libc6-dev libcrypt-dev libcurl4-gnutls-dev libdeflate-dev libdeflate0 156s libevent-2.1-7t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 156s libgnutls-openssl27t64 libgnutls28-dev libgssrpc4t64 libhts-dev libhts3t64 156s libhtscodecs2 libidn2-dev libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 156s libkrb5-dev libldap-dev liblzma-dev libnghttp2-dev libp11-kit-dev 156s libpkgconf3 libpsl-dev librtmp-dev libssh2-1-dev libssl-dev libtasn1-6-dev 156s libunbound8 libzstd-dev linux-libc-dev nettle-dev nim nim-hts-dev 156s nim-hts-examples pkgconf pkgconf-bin rpcsvc-proto zlib1g-dev 157s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. 157s Need to get 22.8 MB of archives. 157s After this operation, 70.4 MB of additional disk space will be used. 157s Get:1 http://ftpmaster.internal/ubuntu resolute/universe armhf nim armhf 2.2.4-2 [6286 kB] 161s Get:2 http://ftpmaster.internal/ubuntu resolute/universe armhf nim-hts-dev all 0.3.25+ds-3 [35.8 kB] 161s Get:3 http://ftpmaster.internal/ubuntu resolute/universe armhf hts-nim-tools armhf 0.2.1-4 [211 kB] 162s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc-dev-bin armhf 2.42-2ubuntu5 [21.8 kB] 162s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf linux-libc-dev armhf 6.18.0-9.9 [1819 kB] 162s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libcrypt-dev armhf 1:4.5.1-1 [128 kB] 162s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf rpcsvc-proto armhf 1.4.3-1build1 [62.6 kB] 162s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libc6-dev armhf 2.42-2ubuntu5 [1416 kB] 163s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf comerr-dev armhf 2.1-1.47.2-3ubuntu2 [44.1 kB] 163s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf libgssrpc4t64 armhf 1.22.1-2 [51.8 kB] 163s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf libkadm5clnt-mit12 armhf 1.22.1-2 [35.7 kB] 163s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf libkdb5-10t64 armhf 1.22.1-2 [36.0 kB] 163s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf libkadm5srv-mit12 armhf 1.22.1-2 [46.7 kB] 163s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf krb5-multidev armhf 1.22.1-2 [126 kB] 163s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf libbrotli-dev armhf 1.1.0-2build6 [337 kB] 163s Get:16 http://ftpmaster.internal/ubuntu resolute/main armhf libbz2-dev armhf 1.0.8-6build2 [31.2 kB] 163s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-10build1 [130 kB] 163s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libunbound8 armhf 1.24.2-1ubuntu1 [433 kB] 163s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf libgnutls-dane0t64 armhf 3.8.10-3ubuntu1 [32.6 kB] 163s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libgnutls-openssl27t64 armhf 3.8.10-3ubuntu1 [32.3 kB] 163s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf libidn2-dev armhf 2.3.8-4 [116 kB] 163s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf libp11-kit-dev armhf 0.25.10-1 [29.3 kB] 163s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libtasn1-6-dev armhf 4.21.0-2 [86.7 kB] 163s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf libgmpxx4ldbl armhf 2:6.3.0+dfsg-5ubuntu1 [9224 B] 163s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf libgmp-dev armhf 2:6.3.0+dfsg-5ubuntu1 [292 kB] 163s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf nettle-dev armhf 3.10.2-1 [1174 kB] 163s Get:27 http://ftpmaster.internal/ubuntu resolute/main armhf libgnutls28-dev armhf 3.8.10-3ubuntu1 [1043 kB] 164s Get:28 http://ftpmaster.internal/ubuntu resolute/main armhf libkrb5-dev armhf 1.22.1-2 [11.9 kB] 164s Get:29 http://ftpmaster.internal/ubuntu resolute/main armhf libldap-dev armhf 2.6.10+dfsg-1ubuntu5 [290 kB] 164s Get:30 http://ftpmaster.internal/ubuntu resolute/main armhf libpkgconf3 armhf 1.8.1-4build1 [26.6 kB] 164s Get:31 http://ftpmaster.internal/ubuntu resolute/main armhf pkgconf-bin armhf 1.8.1-4build1 [21.4 kB] 164s Get:32 http://ftpmaster.internal/ubuntu resolute/main armhf pkgconf armhf 1.8.1-4build1 [16.8 kB] 164s Get:33 http://ftpmaster.internal/ubuntu resolute/main armhf libnghttp2-dev armhf 1.64.0-1.1ubuntu1 [107 kB] 164s Get:34 http://ftpmaster.internal/ubuntu resolute/main armhf libpsl-dev armhf 0.21.2-1.1build2 [77.8 kB] 164s Get:35 http://ftpmaster.internal/ubuntu resolute/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu2 [881 kB] 164s Get:36 http://ftpmaster.internal/ubuntu resolute/main armhf librtmp-dev armhf 2.4+20151223.gitfa8646d.1-3 [63.4 kB] 164s Get:37 http://ftpmaster.internal/ubuntu resolute/main armhf libssl-dev armhf 3.5.3-1ubuntu2 [2550 kB] 164s Get:38 http://ftpmaster.internal/ubuntu resolute/main armhf libssh2-1-dev armhf 1.11.1-1build1 [270 kB] 164s Get:39 http://ftpmaster.internal/ubuntu resolute/main armhf libzstd-dev armhf 1.5.7+dfsg-3 [342 kB] 164s Get:40 http://ftpmaster.internal/ubuntu resolute/main armhf libcurl4-gnutls-dev armhf 8.18.0-1ubuntu1 [497 kB] 164s Get:41 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate0 armhf 1.23-2 [38.7 kB] 164s Get:42 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate-dev armhf 1.23-2 [45.2 kB] 164s Get:43 http://ftpmaster.internal/ubuntu resolute/universe armhf libhtscodecs2 armhf 1.6.1-2build1 [67.0 kB] 164s Get:44 http://ftpmaster.internal/ubuntu resolute/universe armhf libhts3t64 armhf 1.22.1+ds2-1 [408 kB] 164s Get:45 http://ftpmaster.internal/ubuntu resolute/main armhf liblzma-dev armhf 5.8.2-2 [167 kB] 164s Get:46 http://ftpmaster.internal/ubuntu resolute/universe armhf libhts-dev armhf 1.22.1+ds2-1 [1813 kB] 164s Get:47 http://ftpmaster.internal/ubuntu resolute/universe armhf nim-hts-examples all 0.3.25+ds-3 [1085 kB] 165s Fetched 22.8 MB in 8s (2850 kB/s) 165s Selecting previously unselected package nim. 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 68395 files and directories currently installed.) 165s Preparing to unpack .../00-nim_2.2.4-2_armhf.deb ... 165s Unpacking nim (2.2.4-2) ... 165s Selecting previously unselected package nim-hts-dev. 165s Preparing to unpack .../01-nim-hts-dev_0.3.25+ds-3_all.deb ... 165s Unpacking nim-hts-dev (0.3.25+ds-3) ... 166s Selecting previously unselected package hts-nim-tools. 166s Preparing to unpack .../02-hts-nim-tools_0.2.1-4_armhf.deb ... 166s Unpacking hts-nim-tools (0.2.1-4) ... 166s Selecting previously unselected package libc-dev-bin. 166s Preparing to unpack .../03-libc-dev-bin_2.42-2ubuntu5_armhf.deb ... 166s Unpacking libc-dev-bin (2.42-2ubuntu5) ... 166s Selecting previously unselected package linux-libc-dev:armhf. 166s Preparing to unpack .../04-linux-libc-dev_6.18.0-9.9_armhf.deb ... 166s Unpacking linux-libc-dev:armhf (6.18.0-9.9) ... 166s Selecting previously unselected package libcrypt-dev:armhf. 166s Preparing to unpack .../05-libcrypt-dev_1%3a4.5.1-1_armhf.deb ... 166s Unpacking libcrypt-dev:armhf (1:4.5.1-1) ... 166s Selecting previously unselected package rpcsvc-proto. 166s Preparing to unpack .../06-rpcsvc-proto_1.4.3-1build1_armhf.deb ... 166s Unpacking rpcsvc-proto (1.4.3-1build1) ... 166s Selecting previously unselected package libc6-dev:armhf. 166s Preparing to unpack .../07-libc6-dev_2.42-2ubuntu5_armhf.deb ... 166s Unpacking libc6-dev:armhf (2.42-2ubuntu5) ... 166s Selecting previously unselected package comerr-dev:armhf. 166s Preparing to unpack .../08-comerr-dev_2.1-1.47.2-3ubuntu2_armhf.deb ... 166s Unpacking comerr-dev:armhf (2.1-1.47.2-3ubuntu2) ... 166s Selecting previously unselected package libgssrpc4t64:armhf. 166s Preparing to unpack .../09-libgssrpc4t64_1.22.1-2_armhf.deb ... 166s Unpacking libgssrpc4t64:armhf (1.22.1-2) ... 166s Selecting previously unselected package libkadm5clnt-mit12:armhf. 166s Preparing to unpack .../10-libkadm5clnt-mit12_1.22.1-2_armhf.deb ... 166s Unpacking libkadm5clnt-mit12:armhf (1.22.1-2) ... 166s Selecting previously unselected package libkdb5-10t64:armhf. 166s Preparing to unpack .../11-libkdb5-10t64_1.22.1-2_armhf.deb ... 166s Unpacking libkdb5-10t64:armhf (1.22.1-2) ... 166s Selecting previously unselected package libkadm5srv-mit12:armhf. 166s Preparing to unpack .../12-libkadm5srv-mit12_1.22.1-2_armhf.deb ... 166s Unpacking libkadm5srv-mit12:armhf (1.22.1-2) ... 166s Selecting previously unselected package krb5-multidev:armhf. 166s Preparing to unpack .../13-krb5-multidev_1.22.1-2_armhf.deb ... 166s Unpacking krb5-multidev:armhf (1.22.1-2) ... 166s Selecting previously unselected package libbrotli-dev:armhf. 166s Preparing to unpack .../14-libbrotli-dev_1.1.0-2build6_armhf.deb ... 166s Unpacking libbrotli-dev:armhf (1.1.0-2build6) ... 166s Selecting previously unselected package libbz2-dev:armhf. 166s Preparing to unpack .../15-libbz2-dev_1.0.8-6build2_armhf.deb ... 166s Unpacking libbz2-dev:armhf (1.0.8-6build2) ... 166s Selecting previously unselected package libevent-2.1-7t64:armhf. 166s Preparing to unpack .../16-libevent-2.1-7t64_2.1.12-stable-10build1_armhf.deb ... 166s Unpacking libevent-2.1-7t64:armhf (2.1.12-stable-10build1) ... 166s Selecting previously unselected package libunbound8:armhf. 166s Preparing to unpack .../17-libunbound8_1.24.2-1ubuntu1_armhf.deb ... 166s Unpacking libunbound8:armhf (1.24.2-1ubuntu1) ... 166s Selecting previously unselected package libgnutls-dane0t64:armhf. 166s Preparing to unpack .../18-libgnutls-dane0t64_3.8.10-3ubuntu1_armhf.deb ... 166s Unpacking libgnutls-dane0t64:armhf (3.8.10-3ubuntu1) ... 166s Selecting previously unselected package libgnutls-openssl27t64:armhf. 166s Preparing to unpack .../19-libgnutls-openssl27t64_3.8.10-3ubuntu1_armhf.deb ... 166s Unpacking libgnutls-openssl27t64:armhf (3.8.10-3ubuntu1) ... 166s Selecting previously unselected package libidn2-dev:armhf. 166s Preparing to unpack .../20-libidn2-dev_2.3.8-4_armhf.deb ... 166s Unpacking libidn2-dev:armhf (2.3.8-4) ... 166s Selecting previously unselected package libp11-kit-dev:armhf. 166s Preparing to unpack .../21-libp11-kit-dev_0.25.10-1_armhf.deb ... 166s Unpacking libp11-kit-dev:armhf (0.25.10-1) ... 166s Selecting previously unselected package libtasn1-6-dev:armhf. 166s Preparing to unpack .../22-libtasn1-6-dev_4.21.0-2_armhf.deb ... 166s Unpacking libtasn1-6-dev:armhf (4.21.0-2) ... 166s Selecting previously unselected package libgmpxx4ldbl:armhf. 166s Preparing to unpack .../23-libgmpxx4ldbl_2%3a6.3.0+dfsg-5ubuntu1_armhf.deb ... 166s Unpacking libgmpxx4ldbl:armhf (2:6.3.0+dfsg-5ubuntu1) ... 166s Selecting previously unselected package libgmp-dev:armhf. 167s Preparing to unpack .../24-libgmp-dev_2%3a6.3.0+dfsg-5ubuntu1_armhf.deb ... 167s Unpacking libgmp-dev:armhf (2:6.3.0+dfsg-5ubuntu1) ... 167s Selecting previously unselected package nettle-dev:armhf. 167s Preparing to unpack .../25-nettle-dev_3.10.2-1_armhf.deb ... 167s Unpacking nettle-dev:armhf (3.10.2-1) ... 167s Selecting previously unselected package libgnutls28-dev:armhf. 167s Preparing to unpack .../26-libgnutls28-dev_3.8.10-3ubuntu1_armhf.deb ... 167s Unpacking libgnutls28-dev:armhf (3.8.10-3ubuntu1) ... 167s Selecting previously unselected package libkrb5-dev:armhf. 167s Preparing to unpack .../27-libkrb5-dev_1.22.1-2_armhf.deb ... 167s Unpacking libkrb5-dev:armhf (1.22.1-2) ... 167s Selecting previously unselected package libldap-dev:armhf. 167s Preparing to unpack .../28-libldap-dev_2.6.10+dfsg-1ubuntu5_armhf.deb ... 167s Unpacking libldap-dev:armhf (2.6.10+dfsg-1ubuntu5) ... 167s Selecting previously unselected package libpkgconf3:armhf. 167s Preparing to unpack .../29-libpkgconf3_1.8.1-4build1_armhf.deb ... 167s Unpacking libpkgconf3:armhf (1.8.1-4build1) ... 167s Selecting previously unselected package pkgconf-bin. 167s Preparing to unpack .../30-pkgconf-bin_1.8.1-4build1_armhf.deb ... 167s Unpacking pkgconf-bin (1.8.1-4build1) ... 167s Selecting previously unselected package pkgconf:armhf. 167s Preparing to unpack .../31-pkgconf_1.8.1-4build1_armhf.deb ... 167s Unpacking pkgconf:armhf (1.8.1-4build1) ... 167s Selecting previously unselected package libnghttp2-dev:armhf. 167s Preparing to unpack .../32-libnghttp2-dev_1.64.0-1.1ubuntu1_armhf.deb ... 167s Unpacking libnghttp2-dev:armhf (1.64.0-1.1ubuntu1) ... 167s Selecting previously unselected package libpsl-dev:armhf. 167s Preparing to unpack .../33-libpsl-dev_0.21.2-1.1build2_armhf.deb ... 167s Unpacking libpsl-dev:armhf (0.21.2-1.1build2) ... 167s Selecting previously unselected package zlib1g-dev:armhf. 167s Preparing to unpack .../34-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_armhf.deb ... 167s Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 167s Selecting previously unselected package librtmp-dev:armhf. 167s Preparing to unpack .../35-librtmp-dev_2.4+20151223.gitfa8646d.1-3_armhf.deb ... 167s Unpacking librtmp-dev:armhf (2.4+20151223.gitfa8646d.1-3) ... 167s Selecting previously unselected package libssl-dev:armhf. 167s Preparing to unpack .../36-libssl-dev_3.5.3-1ubuntu2_armhf.deb ... 167s Unpacking libssl-dev:armhf (3.5.3-1ubuntu2) ... 167s Selecting previously unselected package libssh2-1-dev:armhf. 167s Preparing to unpack .../37-libssh2-1-dev_1.11.1-1build1_armhf.deb ... 167s Unpacking libssh2-1-dev:armhf (1.11.1-1build1) ... 167s Selecting previously unselected package libzstd-dev:armhf. 167s Preparing to unpack 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... 167s Unpacking libhts3t64:armhf (1.22.1+ds2-1) ... 167s Selecting previously unselected package liblzma-dev:armhf. 167s Preparing to unpack .../44-liblzma-dev_5.8.2-2_armhf.deb ... 167s Unpacking liblzma-dev:armhf (5.8.2-2) ... 167s Selecting previously unselected package libhts-dev:armhf. 168s Preparing to unpack .../45-libhts-dev_1.22.1+ds2-1_armhf.deb ... 168s Unpacking libhts-dev:armhf (1.22.1+ds2-1) ... 168s Selecting previously unselected package nim-hts-examples. 168s Preparing to unpack .../46-nim-hts-examples_0.3.25+ds-3_all.deb ... 168s Unpacking nim-hts-examples (0.3.25+ds-3) ... 168s Setting up libhtscodecs2:armhf (1.6.1-2build1) ... 168s Setting up libgnutls-openssl27t64:armhf (3.8.10-3ubuntu1) ... 168s Setting up libzstd-dev:armhf (1.5.7+dfsg-3) ... 168s Setting up libdeflate0:armhf (1.23-2) ... 168s Setting up linux-libc-dev:armhf (6.18.0-9.9) ... 168s Setting up libevent-2.1-7t64:armhf (2.1.12-stable-10build1) ... 168s Setting up libpsl-dev:armhf (0.21.2-1.1build2) ... 168s Setting up libunbound8:armhf (1.24.2-1ubuntu1) ... 168s Setting up libpkgconf3:armhf (1.8.1-4build1) ... 168s Setting up libgmpxx4ldbl:armhf (2:6.3.0+dfsg-5ubuntu1) ... 168s Setting up rpcsvc-proto (1.4.3-1build1) ... 168s Setting up libgnutls-dane0t64:armhf (3.8.10-3ubuntu1) ... 168s Setting up libgssrpc4t64:armhf (1.22.1-2) ... 168s Setting up libldap-dev:armhf (2.6.10+dfsg-1ubuntu5) ... 168s Setting up libssl-dev:armhf (3.5.3-1ubuntu2) ... 168s Setting up pkgconf-bin (1.8.1-4build1) ... 168s Setting up libidn2-dev:armhf (2.3.8-4) ... 168s Setting up liblzma-dev:armhf (5.8.2-2) ... 168s Setting up libcrypt-dev:armhf (1:4.5.1-1) ... 168s Setting up libhts3t64:armhf (1.22.1+ds2-1) ... 168s Setting up nim (2.2.4-2) ... 168s Setting up libc-dev-bin (2.42-2ubuntu5) ... 168s Setting up libtasn1-6-dev:armhf (4.21.0-2) ... 168s Setting up libdeflate-dev:armhf (1.23-2) ... 168s Setting up libbrotli-dev:armhf (1.1.0-2build6) ... 168s Setting up libp11-kit-dev:armhf (0.25.10-1) ... 168s Setting up libkadm5clnt-mit12:armhf (1.22.1-2) ... 168s Setting up nim-hts-examples (0.3.25+ds-3) ... 168s Setting up libgmp-dev:armhf (2:6.3.0+dfsg-5ubuntu1) ... 168s Setting up nettle-dev:armhf (3.10.2-1) ... 168s Setting up libkdb5-10t64:armhf (1.22.1-2) ... 168s Setting up pkgconf:armhf (1.8.1-4build1) ... 168s Setting up nim-hts-dev (0.3.25+ds-3) ... 168s Setting up libkadm5srv-mit12:armhf (1.22.1-2) ... 168s Setting up libc6-dev:armhf (2.42-2ubuntu5) ... 168s Setting up libbz2-dev:armhf (1.0.8-6build2) ... 168s Setting up libgnutls28-dev:armhf (3.8.10-3ubuntu1) ... 168s Setting up libnghttp2-dev:armhf (1.64.0-1.1ubuntu1) ... 168s Setting up hts-nim-tools (0.2.1-4) ... 168s Setting up comerr-dev:armhf (2.1-1.47.2-3ubuntu2) ... 168s Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 168s Setting up krb5-multidev:armhf (1.22.1-2) ... 168s Setting up libkrb5-dev:armhf (1.22.1-2) ... 168s Setting up librtmp-dev:armhf (2.4+20151223.gitfa8646d.1-3) ... 168s Setting up libssh2-1-dev:armhf (1.11.1-1build1) ... 168s Setting up libcurl4-gnutls-dev:armhf (8.18.0-1ubuntu1) ... 168s Setting up libhts-dev:armhf (1.22.1+ds2-1) ... 168s Processing triggers for install-info (7.2-5) ... 168s Processing triggers for libc-bin (2.42-2ubuntu5) ... 168s Processing triggers for man-db (2.13.1-1) ... 177s autopkgtest [03:53:01]: test run-unit-test: [----------------------- 180s Test 1 180s SRR741409.55403397 163 6 32815223 60 101M = 32815450 307 AGGCAAGACTACTGGGGTTTCAGCAAAGGTAAAGATGGCTGGGGGGTGAGATGAGGGGAGAGAGTACCTGTGTCATAGCCCTGAGGGAGTCCAGAGATGAA 3I76FEC-CF:CDDBEEF?+EDAGHGIGGGBH;G?KGC)HF:@$;2@=ED?AFD@%--9?.632B+7>DFMAFDDDDGGGG6=9G+9BAED X0:i:1 X1:i:0 MD:Z:43T11T45 RG:Z:SRR741409 AM:i:37 NM:i:2 SM:i:37 MQ:i:60 XT:A:U BQ:Z:@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@GI 180s SRR741410.29215685 147 6 32815248 60 35S66M = 32814948 -365 TGAAGGATAAAGGCAAGGCTACTGGGGTTTCAGCGAAGGTAAAGATGGCTGGGTGGTAAGATGAGGGGAGAGAGTACCTGTGTCATAGCCCTGAGGGAGTC ####################################KC,3+48>+.:J32A>>D;>**5-(F81@J?@B@?-BC@3 X0:i:1 X1:i:0 XC:i:66 MD:Z:22G7T35 RG:Z:SRR741410 AM:i:37 NM:i:2 SM:i:37 MQ:i:60 XT:A:U BQ:Z:@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ 180s SRR741410.55980768 147 6 32816034 60 101M = 32815881 -253 GGAGTAGAGATAGAAGAAGCAGCAAAGACAAGGGCAGAGACCCAGCACCACTATGCCACACACTTGATGTCAGATACCACCAGGATAGGGAAAAATCACAT CGHFDIHIIJGNNLONENIIKJKIIJJIJGJFLFJHFHFECFGIEHGFFFG@FHHGEKDJDFGFEGCED@KHEG>EIFCEFDDI7(HHHH>?EEFCEAJD3 X0:i:1 X1:i:0 MD:Z:20G64A15 RG:Z:SRR741410 AM:i:37 NM:i:2 SM:i:37 MQ:i:60 XT:A:U BQ:Z:AB@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ 180s SRR741410.35483374 147 6 32816073 60 5S96M = 32815822 -346 CAGAGGCCCAGCACCACTATGCCACACACTTGATGTCAGATCCCACCAGGAAAGGGAAAAATCACATTCCAAATTACAAAGGAAAAGGAAAGATGGAAGAC ######DHEJB@88>4BCF7C(0BC8C7>D?D7C<7GFDE:'C8FEGF@CCEGDAGEFCDEFK>LG;DFGG>BJA?H/3C:*1CFFF*GFBF>F@G)5E-DLMEFHA?FFMKG?IB<-BCEII6+2JE######### X0:i:1 X1:i:0 XC:i:93 MD:Z:56A2C33 RG:Z:SRR741410 AM:i:29 NM:i:2 SM:i:29 MQ:i:29 XT:A:U BQ:Z:@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ 180s ======================================= 180s PASS 180s autopkgtest [03:53:04]: test run-unit-test: -----------------------] 185s run-unit-test PASS 185s autopkgtest [03:53:09]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 189s autopkgtest [03:53:13]: @@@@@@@@@@@@@@@@@@@@ summary 189s run-unit-test PASS