0s autopkgtest [05:32:37]: starting date and time: 2026-01-30 05:32:37+0000 0s autopkgtest [05:32:37]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [05:32:37]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qik1hc2q/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:ruamel.yaml --apt-upgrade custodian --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=ruamel.yaml/0.18.10+ds-1build1 -- lxd -r lxd-armhf-10.145.243.46 lxd-armhf-10.145.243.46:autopkgtest/ubuntu/resolute/armhf 24s autopkgtest [05:33:01]: testbed dpkg architecture: armhf 26s autopkgtest [05:33:03]: testbed apt version: 3.1.14 32s autopkgtest [05:33:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 34s autopkgtest [05:33:11]: testbed release detected to be: None 43s autopkgtest [05:33:20]: updating testbed package index (apt update) 45s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 46s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [124 kB] 46s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 46s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 46s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [33.0 kB] 46s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [103 kB] 46s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1600 kB] 48s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2820 B] 48s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [118 kB] 48s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [1078 kB] 49s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [10.8 kB] 49s Get:12 http://ftpmaster.internal/ubuntu resolute/main Sources [1406 kB] 50s Get:13 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.3 MB] 59s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1374 kB] 60s Get:15 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [15.0 MB] 75s Fetched 42.3 MB in 30s (1410 kB/s) 76s Reading package lists... 84s autopkgtest [05:34:01]: upgrading testbed (apt dist-upgrade and autopurge) 86s Reading package lists... 86s Building dependency tree... 86s Reading state information... 87s Calculating upgrade... 87s The following packages will be upgraded: 87s bzip2 inetutils-telnet libbz2-1.0 libsqlite3-0 telnet 87s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s Need to get 775 kB of archives. 87s After this operation, 2048 B of additional disk space will be used. 87s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf bzip2 armhf 1.0.8-6build2 [33.8 kB] 87s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libbz2-1.0 armhf 1.0.8-6build2 [31.6 kB] 88s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libsqlite3-0 armhf 3.46.1-9 [609 kB] 88s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf inetutils-telnet armhf 2:2.7-2ubuntu1 [96.8 kB] 88s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf telnet all 0.17+2.7-2ubuntu1 [3636 B] 89s Fetched 775 kB in 1s (691 kB/s) 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66512 files and directories currently installed.) 89s Preparing to unpack .../bzip2_1.0.8-6build2_armhf.deb ... 89s Unpacking bzip2 (1.0.8-6build2) over (1.0.8-6build1) ... 89s Preparing to unpack .../libbz2-1.0_1.0.8-6build2_armhf.deb ... 89s Unpacking libbz2-1.0:armhf (1.0.8-6build2) over (1.0.8-6build1) ... 89s Setting up libbz2-1.0:armhf (1.0.8-6build2) ... 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66512 files and directories currently installed.) 89s Preparing to unpack .../libsqlite3-0_3.46.1-9_armhf.deb ... 89s Unpacking libsqlite3-0:armhf (3.46.1-9) over (3.46.1-8) ... 89s Preparing to unpack .../inetutils-telnet_2%3a2.7-2ubuntu1_armhf.deb ... 89s Unpacking inetutils-telnet (2:2.7-2ubuntu1) over (2:2.6-4ubuntu1) ... 89s Preparing to unpack .../telnet_0.17+2.7-2ubuntu1_all.deb ... 89s Unpacking telnet (0.17+2.7-2ubuntu1) over (0.17+2.6-4ubuntu1) ... 89s Setting up libsqlite3-0:armhf (3.46.1-9) ... 89s Setting up inetutils-telnet (2:2.7-2ubuntu1) ... 89s Setting up bzip2 (1.0.8-6build2) ... 89s Setting up telnet (0.17+2.7-2ubuntu1) ... 89s Processing triggers for man-db (2.13.1-1) ... 90s Processing triggers for libc-bin (2.42-2ubuntu4) ... 92s Reading package lists... 92s Building dependency tree... 92s Reading state information... 92s Solving dependencies... 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s autopkgtest [05:34:12]: rebooting testbed after setup commands that affected boot 139s autopkgtest [05:34:56]: testbed running kernel: Linux 6.8.0-87-generic #88~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 14 14:00:09 UTC 2 166s autopkgtest [05:35:23]: @@@@@@@@@@@@@@@@@@@@ apt-source custodian 254s Get:1 http://ftpmaster.internal/ubuntu resolute/universe custodian 2024.10.16-1 (dsc) [2442 B] 254s Get:2 http://ftpmaster.internal/ubuntu resolute/universe custodian 2024.10.16-1 (tar) [51.2 MB] 254s Get:3 http://ftpmaster.internal/ubuntu resolute/universe custodian 2024.10.16-1 (diff) [8360 B] 254s gpgv: Signature made Sat Feb 15 20:44:02 2025 UTC 254s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 254s gpgv: Can't check signature: No public key 254s dpkg-source: warning: cannot verify inline signature for ./custodian_2024.10.16-1.dsc: no acceptable signature found 256s autopkgtest [05:36:53]: testing package custodian version 2024.10.16-1 258s autopkgtest [05:36:55]: build not needed 289s autopkgtest [05:37:26]: test test-custodian: preparing testbed 291s Reading package lists... 292s Building dependency tree... 292s Reading state information... 292s Solving dependencies... 293s The following NEW packages will be installed: 293s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx libblas3 293s libdeflate0 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3 293s libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 293s liblcms2-2 liblerc4 libopenjp2-7 libpython3.14-minimal libpython3.14-stdlib 293s libqhull-r8.0 libraqm0 libsharpyuv0 libsymspg2 libtcl8.6 libtiff6 libtk8.6 293s libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 293s libzopfli1 python-matplotlib-data python3-all python3-annotated-types 293s python3-brotli python3-bson python3-contourpy python3-custodian 293s python3-cycler python3-decorator python3-dnspython python3-email-validator 293s python3-fastjsonschema python3-fonttools python3-iniconfig python3-joblib 293s python3-jupyter-core python3-kiwisolver python3-latexcodec python3-lxml 293s python3-lz4 python3-matplotlib python3-monty python3-mpmath python3-nbformat 293s python3-networkx python3-numpy python3-numpy-dev python3-palettable 293s python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk 293s python3-platformdirs python3-plotly python3-pluggy python3-psutil 293s python3-pybtex python3-pydantic python3-pydantic-core python3-pymatgen 293s python3-pytest python3-pytz python3-ruamel.yaml python3-ruamel.yaml.clib 293s python3-scipy python3-sentry-sdk python3-spglib python3-sympy 293s python3-tabulate python3-tenacity python3-tk python3-tqdm python3-traitlets 293s python3-typing-inspection python3-ufolib2 python3-uncertainties 293s python3-zopfli python3.13-tk python3.14 python3.14-minimal python3.14-tk 293s unicode-data x11-common 293s 0 upgraded, 100 newly installed, 0 to remove and 0 not upgraded. 293s Need to get 110 MB of archives. 293s After this operation, 554 MB of additional disk space will be used. 293s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf python3-numpy-dev armhf 1:2.3.5+ds-3 [141 kB] 293s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libblas3 armhf 3.12.1-7ubuntu1 [133 kB] 293s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libgfortran5 armhf 15.2.0-12ubuntu1 [334 kB] 294s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf liblapack3 armhf 3.12.1-7ubuntu1 [2090 kB] 296s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf python3-numpy armhf 1:2.3.5+ds-3 [4729 kB] 300s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.14-minimal armhf 3.14.2-1 [905 kB] 301s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14-minimal armhf 3.14.2-1 [2155 kB] 303s Get:8 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-mono all 2.37-8build1 [502 kB] 303s Get:9 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-dejavu-core all 2.37-8build1 [834 kB] 304s Get:10 http://ftpmaster.internal/ubuntu resolute/main armhf fontconfig-config armhf 2.17.1-3ubuntu1 [38.5 kB] 304s Get:11 http://ftpmaster.internal/ubuntu resolute/universe armhf fonts-lyx all 2.5.0~RC2-3 [171 kB] 304s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf libdeflate0 armhf 1.23-2 [38.7 kB] 304s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf libfreetype6 armhf 2.14.1+dfsg-2 [345 kB] 304s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf libfontconfig1 armhf 2.17.1-3ubuntu1 [117 kB] 304s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf libgomp1 armhf 15.2.0-12ubuntu1 [129 kB] 305s Get:16 http://ftpmaster.internal/ubuntu resolute/main armhf libgraphite2-3 armhf 1.3.14-11ubuntu1 [65.2 kB] 305s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libharfbuzz0b armhf 12.3.1-1 [501 kB] 305s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 305s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg-turbo8 armhf 2.1.5-4ubuntu2 [127 kB] 305s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 305s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf liblcms2-2 armhf 2.17-1 [139 kB] 305s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu2 [162 kB] 305s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libpython3.14-stdlib armhf 3.14.2-1 [2270 kB] 307s Get:24 http://ftpmaster.internal/ubuntu resolute/universe armhf libqhull-r8.0 armhf 2020.2-8 [175 kB] 308s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf libraqm0 armhf 0.10.3-1 [12.7 kB] 308s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf libsharpyuv0 armhf 1.5.0-0.1build1 [16.3 kB] 308s Get:27 http://ftpmaster.internal/ubuntu resolute/universe armhf libsymspg2 armhf 2.7.0-1 [193 kB] 308s Get:28 http://ftpmaster.internal/ubuntu resolute/main armhf libtcl8.6 armhf 8.6.17+dfsg-1 [918 kB] 310s Get:29 http://ftpmaster.internal/ubuntu resolute/main armhf libjbig0 armhf 2.1-6.1ubuntu3 [25.3 kB] 310s Get:30 http://ftpmaster.internal/ubuntu resolute/main armhf libwebp7 armhf 1.5.0-0.1build1 [189 kB] 310s Get:31 http://ftpmaster.internal/ubuntu resolute/main armhf libtiff6 armhf 4.7.0-3ubuntu3 [188 kB] 310s Get:32 http://ftpmaster.internal/ubuntu resolute/main armhf libxrender1 armhf 1:0.9.12-1 [16.6 kB] 311s Get:33 http://ftpmaster.internal/ubuntu resolute/main armhf libxft2 armhf 2.3.6-1build2 [37.2 kB] 311s Get:34 http://ftpmaster.internal/ubuntu resolute/main armhf x11-common all 1:7.7+24ubuntu1 [22.4 kB] 311s Get:35 http://ftpmaster.internal/ubuntu resolute/main armhf libxss1 armhf 1:1.2.3-1build4 [6328 B] 311s Get:36 http://ftpmaster.internal/ubuntu resolute/main armhf libtk8.6 armhf 8.6.17-1 [694 kB] 311s Get:37 http://ftpmaster.internal/ubuntu resolute/main armhf libwebpdemux2 armhf 1.5.0-0.1build1 [11.7 kB] 311s Get:38 http://ftpmaster.internal/ubuntu resolute/main armhf libwebpmux3 armhf 1.5.0-0.1build1 [22.4 kB] 311s Get:39 http://ftpmaster.internal/ubuntu resolute/main armhf libxslt1.1 armhf 1.1.43-0.3 [146 kB] 312s Get:40 http://ftpmaster.internal/ubuntu resolute/universe armhf libzopfli1 armhf 1.0.3-3 [91.7 kB] 312s Get:41 http://ftpmaster.internal/ubuntu resolute/universe armhf python-matplotlib-data all 3.10.7+dfsg1-1 [2930 kB] 315s Get:42 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14 armhf 3.14.2-1 [816 kB] 316s Get:43 http://ftpmaster.internal/ubuntu resolute/main armhf python3-all armhf 3.13.9-3 [890 B] 316s Get:44 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-annotated-types all 0.7.0-1 [19.4 kB] 316s Get:45 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-brotli armhf 1.1.0-2build6 [327 kB] 316s Get:46 http://ftpmaster.internal/ubuntu resolute/main armhf python3-bson all 4.16.0-1 [44.8 kB] 316s Get:47 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-contourpy armhf 1.3.3-1 [268 kB] 316s Get:48 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pytz all 2025.2-5 [32.4 kB] 316s Get:49 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pandas-lib armhf 2.3.3+dfsg-3 [7022 kB] 327s Get:50 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pandas all 2.3.3+dfsg-3 [2948 kB] 329s Get:51 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pydantic-core armhf 2.41.5-2 [2274 kB] 331s Get:52 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-typing-inspection all 0.4.2-1 [13.1 kB] 331s Get:53 http://ftpmaster.internal/ubuntu resolute/main armhf python3-dnspython all 2.7.0-1ubuntu2 [167 kB] 331s Get:54 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-email-validator all 2.2.0-1 [28.5 kB] 331s Get:55 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pydantic armhf 2.12.5-2 [312 kB] 331s Get:56 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-tqdm all 4.67.1-7 [93.3 kB] 332s Get:57 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-ruamel.yaml.clib armhf 0.2.15+ds-1 [183 kB] 332s Get:58 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf python3-ruamel.yaml all 0.18.10+ds-1build1 [127 kB] 332s Get:59 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-monty all 2025.3.3-1 [40.4 kB] 332s Get:60 http://ftpmaster.internal/ubuntu resolute/main armhf python3-psutil armhf 7.1.0-1ubuntu1 [189 kB] 332s Get:61 http://ftpmaster.internal/ubuntu resolute/main armhf libopenjp2-7 armhf 2.5.4-1 [175 kB] 332s Get:62 http://ftpmaster.internal/ubuntu resolute/main armhf python3-pil armhf 12.0.0-1ubuntu1 [462 kB] 332s Get:63 http://ftpmaster.internal/ubuntu resolute/main armhf python3.13-tk armhf 3.13.11-1 [104 kB] 333s Get:64 http://ftpmaster.internal/ubuntu resolute/main armhf python3.14-tk armhf 3.14.2-1 [105 kB] 333s Get:65 http://ftpmaster.internal/ubuntu resolute/main armhf python3-tk armhf 3.13.9-3 [11.2 kB] 333s Get:66 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pil.imagetk armhf 12.0.0-1ubuntu1 [9168 B] 333s Get:67 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-cycler all 0.12.1-2 [9850 B] 333s Get:68 http://ftpmaster.internal/ubuntu resolute/main armhf python3-lxml armhf 6.0.2-1 [2260 kB] 335s Get:69 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-lz4 armhf 4.4.5+dfsg-1 [26.1 kB] 335s Get:70 http://ftpmaster.internal/ubuntu resolute/main armhf python3-decorator all 5.2.1-2 [28.1 kB] 335s Get:71 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-scipy armhf 1.16.3-4 [18.3 MB] 349s Get:72 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-mpmath all 1.3.0-2 [423 kB] 349s Get:73 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-sympy all 1.14.0-2 [4306 kB] 352s Get:74 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-ufolib2 all 0.18.1+dfsg1-1 [33.7 kB] 352s Get:75 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-zopfli armhf 0.4.0-1 [10.5 kB] 352s Get:76 http://ftpmaster.internal/ubuntu resolute/universe armhf unicode-data all 16.0.0-1build1 [9543 kB] 357s Get:77 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-fonttools armhf 4.61.1-3 [1697 kB] 358s Get:78 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-kiwisolver armhf 1.4.10~rc0-1 [77.8 kB] 358s Get:79 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-matplotlib armhf 3.10.7+dfsg1-1 [17.2 MB] 370s Get:80 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-sentry-sdk all 2.22.0-1 [199 kB] 370s Get:81 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-custodian all 2024.10.16-1 [90.9 kB] 370s Get:82 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-fastjsonschema all 2.21.1-1 [20.4 kB] 370s Get:83 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-iniconfig all 2.1.0-2 [6962 B] 370s Get:84 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-joblib all 1.5.2-1 [210 kB] 370s Get:85 http://ftpmaster.internal/ubuntu resolute/main armhf python3-platformdirs all 4.5.1-1 [17.1 kB] 370s Get:86 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-traitlets all 5.14.3+really5.14.3-2 [71.7 kB] 370s Get:87 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-jupyter-core all 5.9.1-1 [28.9 kB] 370s Get:88 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-latexcodec all 3.0.0-1 [16.6 kB] 370s Get:89 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-nbformat all 5.10.4-1 [39.2 kB] 370s Get:90 http://ftpmaster.internal/ubuntu resolute/main armhf python3-networkx all 3.2.1-4ubuntu2 [11.8 MB] 376s Get:91 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-palettable all 3.3.3-3 [72.6 kB] 376s Get:92 http://ftpmaster.internal/ubuntu resolute/main armhf python3-tenacity all 9.0.0-0ubuntu1 [17.0 kB] 376s Get:93 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-plotly all 5.20.0+dfsg-1.1 [2766 kB] 377s Get:94 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pluggy all 1.6.0-2 [21.1 kB] 377s Get:95 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pybtex all 0.25.1-1 [70.0 kB] 377s Get:96 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-spglib armhf 2.7.0-1 [179 kB] 377s Get:97 http://ftpmaster.internal/ubuntu resolute/main armhf python3-tabulate all 0.9.0-1build1 [45.4 kB] 377s Get:98 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-uncertainties all 3.2.3-4 [51.8 kB] 377s Get:99 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pymatgen armhf 2025.2.18+dfsg1-5 [2599 kB] 378s Get:100 http://ftpmaster.internal/ubuntu resolute/universe armhf python3-pytest all 9.0.2-2 [277 kB] 380s Fetched 110 MB in 1min 26s (1278 kB/s) 380s Selecting previously unselected package python3-numpy-dev:armhf. 380s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66512 files and directories currently installed.) 380s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.5+ds-3_armhf.deb ... 380s Unpacking python3-numpy-dev:armhf (1:2.3.5+ds-3) ... 380s Selecting previously unselected package libblas3:armhf. 380s Preparing to unpack .../01-libblas3_3.12.1-7ubuntu1_armhf.deb ... 380s Unpacking libblas3:armhf (3.12.1-7ubuntu1) ... 380s Selecting previously unselected package libgfortran5:armhf. 380s Preparing to unpack .../02-libgfortran5_15.2.0-12ubuntu1_armhf.deb ... 380s Unpacking libgfortran5:armhf (15.2.0-12ubuntu1) ... 380s Selecting previously unselected package liblapack3:armhf. 380s Preparing to unpack .../03-liblapack3_3.12.1-7ubuntu1_armhf.deb ... 380s Unpacking liblapack3:armhf (3.12.1-7ubuntu1) ... 380s Selecting previously unselected package python3-numpy. 380s Preparing to unpack .../04-python3-numpy_1%3a2.3.5+ds-3_armhf.deb ... 380s Unpacking python3-numpy (1:2.3.5+ds-3) ... 380s Selecting previously unselected package libpython3.14-minimal:armhf. 380s Preparing to unpack .../05-libpython3.14-minimal_3.14.2-1_armhf.deb ... 380s Unpacking libpython3.14-minimal:armhf (3.14.2-1) ... 381s Selecting previously unselected package python3.14-minimal. 381s Preparing to unpack .../06-python3.14-minimal_3.14.2-1_armhf.deb ... 381s Unpacking python3.14-minimal (3.14.2-1) ... 381s Selecting previously unselected package fonts-dejavu-mono. 381s Preparing to unpack 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libfreetype6:armhf (2.14.1+dfsg-2) ... 382s Selecting previously unselected package libfontconfig1:armhf. 382s Preparing to unpack .../13-libfontconfig1_2.17.1-3ubuntu1_armhf.deb ... 382s Unpacking libfontconfig1:armhf (2.17.1-3ubuntu1) ... 382s Selecting previously unselected package libgomp1:armhf. 382s Preparing to unpack .../14-libgomp1_15.2.0-12ubuntu1_armhf.deb ... 382s Unpacking libgomp1:armhf (15.2.0-12ubuntu1) ... 382s Selecting previously unselected package libgraphite2-3:armhf. 382s Preparing to unpack .../15-libgraphite2-3_1.3.14-11ubuntu1_armhf.deb ... 382s Unpacking libgraphite2-3:armhf (1.3.14-11ubuntu1) ... 382s Selecting previously unselected package libharfbuzz0b:armhf. 382s Preparing to unpack .../16-libharfbuzz0b_12.3.1-1_armhf.deb ... 382s Unpacking libharfbuzz0b:armhf (12.3.1-1) ... 382s Selecting previously unselected package libimagequant0:armhf. 382s Preparing to unpack .../17-libimagequant0_2.18.0-1build1_armhf.deb ... 382s Unpacking libimagequant0:armhf (2.18.0-1build1) ... 382s Selecting previously unselected package libjpeg-turbo8:armhf. 382s Preparing to unpack .../18-libjpeg-turbo8_2.1.5-4ubuntu2_armhf.deb ... 382s Unpacking libjpeg-turbo8:armhf (2.1.5-4ubuntu2) ... 382s Selecting previously unselected package libjpeg8:armhf. 382s Preparing to unpack .../19-libjpeg8_8c-2ubuntu11_armhf.deb ... 382s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 382s Selecting previously unselected package liblcms2-2:armhf. 382s Preparing to unpack .../20-liblcms2-2_2.17-1_armhf.deb ... 382s Unpacking liblcms2-2:armhf (2.17-1) ... 382s Selecting previously unselected package liblerc4:armhf. 382s Preparing to unpack .../21-liblerc4_4.0.0+ds-5ubuntu2_armhf.deb ... 382s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu2) ... 382s Selecting previously unselected package libpython3.14-stdlib:armhf. 382s Preparing to unpack .../22-libpython3.14-stdlib_3.14.2-1_armhf.deb ... 382s Unpacking libpython3.14-stdlib:armhf (3.14.2-1) ... 382s Selecting previously unselected package libqhull-r8.0:armhf. 382s Preparing to unpack .../23-libqhull-r8.0_2020.2-8_armhf.deb ... 382s Unpacking libqhull-r8.0:armhf (2020.2-8) ... 382s Selecting previously unselected package libraqm0:armhf. 382s Preparing to unpack .../24-libraqm0_0.10.3-1_armhf.deb ... 382s Unpacking libraqm0:armhf (0.10.3-1) ... 382s Selecting previously unselected package libsharpyuv0:armhf. 382s Preparing to unpack .../25-libsharpyuv0_1.5.0-0.1build1_armhf.deb ... 382s Unpacking libsharpyuv0:armhf (1.5.0-0.1build1) ... 383s Selecting previously unselected package libsymspg2:armhf. 383s Preparing to unpack .../26-libsymspg2_2.7.0-1_armhf.deb ... 383s Unpacking libsymspg2:armhf (2.7.0-1) ... 383s Selecting previously unselected package libtcl8.6:armhf. 383s Preparing to unpack .../27-libtcl8.6_8.6.17+dfsg-1_armhf.deb ... 383s Unpacking libtcl8.6:armhf (8.6.17+dfsg-1) ... 383s Selecting previously unselected package libjbig0:armhf. 383s Preparing to unpack .../28-libjbig0_2.1-6.1ubuntu3_armhf.deb ... 383s Unpacking libjbig0:armhf (2.1-6.1ubuntu3) ... 383s Selecting previously unselected package libwebp7:armhf. 383s Preparing to unpack .../29-libwebp7_1.5.0-0.1build1_armhf.deb ... 383s Unpacking libwebp7:armhf (1.5.0-0.1build1) ... 383s Selecting previously unselected package libtiff6:armhf. 383s Preparing to unpack .../30-libtiff6_4.7.0-3ubuntu3_armhf.deb ... 383s Unpacking libtiff6:armhf (4.7.0-3ubuntu3) ... 383s Selecting previously unselected package libxrender1:armhf. 383s Preparing to unpack .../31-libxrender1_1%3a0.9.12-1_armhf.deb ... 383s Unpacking libxrender1:armhf (1:0.9.12-1) ... 383s Selecting previously unselected package libxft2:armhf. 383s Preparing to unpack .../32-libxft2_2.3.6-1build2_armhf.deb ... 383s Unpacking libxft2:armhf (2.3.6-1build2) ... 383s Selecting previously unselected package x11-common. 383s Preparing to unpack .../33-x11-common_1%3a7.7+24ubuntu1_all.deb ... 383s Unpacking x11-common (1:7.7+24ubuntu1) ... 383s Selecting previously unselected package libxss1:armhf. 383s Preparing to unpack .../34-libxss1_1%3a1.2.3-1build4_armhf.deb ... 383s Unpacking libxss1:armhf (1:1.2.3-1build4) ... 383s Selecting previously unselected package libtk8.6:armhf. 383s Preparing to unpack .../35-libtk8.6_8.6.17-1_armhf.deb ... 383s Unpacking libtk8.6:armhf (8.6.17-1) ... 383s Selecting previously unselected package libwebpdemux2:armhf. 383s Preparing to unpack .../36-libwebpdemux2_1.5.0-0.1build1_armhf.deb ... 383s Unpacking libwebpdemux2:armhf (1.5.0-0.1build1) ... 383s Selecting previously unselected package libwebpmux3:armhf. 383s Preparing to unpack .../37-libwebpmux3_1.5.0-0.1build1_armhf.deb ... 383s Unpacking libwebpmux3:armhf (1.5.0-0.1build1) ... 383s Selecting previously unselected package libxslt1.1:armhf. 383s Preparing to unpack .../38-libxslt1.1_1.1.43-0.3_armhf.deb ... 383s Unpacking libxslt1.1:armhf (1.1.43-0.3) ... 383s Selecting previously unselected package libzopfli1. 383s Preparing to unpack .../39-libzopfli1_1.0.3-3_armhf.deb ... 383s Unpacking libzopfli1 (1.0.3-3) ... 383s Selecting previously unselected package python-matplotlib-data. 383s Preparing to unpack .../40-python-matplotlib-data_3.10.7+dfsg1-1_all.deb ... 383s Unpacking python-matplotlib-data (3.10.7+dfsg1-1) ... 384s Selecting previously unselected package python3.14. 384s Preparing to unpack .../41-python3.14_3.14.2-1_armhf.deb ... 384s Unpacking python3.14 (3.14.2-1) ... 384s Selecting previously unselected package python3-all. 384s Preparing to unpack .../42-python3-all_3.13.9-3_armhf.deb ... 384s Unpacking python3-all (3.13.9-3) ... 384s Selecting previously unselected package python3-annotated-types. 384s Preparing to unpack .../43-python3-annotated-types_0.7.0-1_all.deb ... 384s Unpacking python3-annotated-types (0.7.0-1) ... 384s Selecting previously unselected package python3-brotli. 384s Preparing to unpack .../44-python3-brotli_1.1.0-2build6_armhf.deb ... 384s Unpacking python3-brotli (1.1.0-2build6) ... 384s Selecting previously unselected package python3-bson. 384s Preparing to unpack .../45-python3-bson_4.16.0-1_all.deb ... 384s Unpacking python3-bson (4.16.0-1) ... 384s Selecting previously unselected package python3-contourpy. 384s Preparing to unpack .../46-python3-contourpy_1.3.3-1_armhf.deb ... 384s Unpacking python3-contourpy (1.3.3-1) ... 384s Selecting previously unselected package python3-pytz. 384s Preparing to unpack .../47-python3-pytz_2025.2-5_all.deb ... 384s Unpacking python3-pytz (2025.2-5) ... 384s Selecting previously unselected package python3-pandas-lib:armhf. 384s Preparing to unpack .../48-python3-pandas-lib_2.3.3+dfsg-3_armhf.deb ... 384s Unpacking python3-pandas-lib:armhf (2.3.3+dfsg-3) ... 384s Selecting previously unselected package python3-pandas. 384s Preparing to unpack .../49-python3-pandas_2.3.3+dfsg-3_all.deb ... 384s Unpacking python3-pandas (2.3.3+dfsg-3) ... 385s Selecting previously unselected package python3-pydantic-core. 385s Preparing to unpack .../50-python3-pydantic-core_2.41.5-2_armhf.deb ... 385s Unpacking python3-pydantic-core (2.41.5-2) ... 385s Selecting previously unselected package python3-typing-inspection. 385s Preparing to unpack .../51-python3-typing-inspection_0.4.2-1_all.deb ... 385s Unpacking python3-typing-inspection (0.4.2-1) ... 385s Selecting previously unselected package python3-dnspython. 385s Preparing to unpack .../52-python3-dnspython_2.7.0-1ubuntu2_all.deb ... 385s Unpacking python3-dnspython (2.7.0-1ubuntu2) ... 385s Selecting previously unselected package python3-email-validator. 385s Preparing to unpack .../53-python3-email-validator_2.2.0-1_all.deb ... 385s Unpacking python3-email-validator (2.2.0-1) ... 385s Selecting previously unselected package python3-pydantic. 385s Preparing to unpack .../54-python3-pydantic_2.12.5-2_armhf.deb ... 385s Unpacking python3-pydantic (2.12.5-2) ... 385s Selecting previously unselected package python3-tqdm. 385s Preparing to unpack .../55-python3-tqdm_4.67.1-7_all.deb ... 385s Unpacking python3-tqdm (4.67.1-7) ... 385s Selecting previously unselected package python3-ruamel.yaml.clib. 385s Preparing to unpack .../56-python3-ruamel.yaml.clib_0.2.15+ds-1_armhf.deb ... 385s Unpacking python3-ruamel.yaml.clib (0.2.15+ds-1) ... 385s Selecting previously unselected package python3-ruamel.yaml. 385s Preparing to unpack .../57-python3-ruamel.yaml_0.18.10+ds-1build1_all.deb ... 385s Unpacking python3-ruamel.yaml (0.18.10+ds-1build1) ... 386s Selecting previously unselected package python3-monty. 386s Preparing to unpack .../58-python3-monty_2025.3.3-1_all.deb ... 386s Unpacking python3-monty (2025.3.3-1) ... 386s Selecting previously unselected package python3-psutil. 386s Preparing to unpack .../59-python3-psutil_7.1.0-1ubuntu1_armhf.deb ... 386s Unpacking python3-psutil (7.1.0-1ubuntu1) ... 386s Selecting previously unselected package libopenjp2-7:armhf. 386s Preparing to unpack .../60-libopenjp2-7_2.5.4-1_armhf.deb ... 386s Unpacking libopenjp2-7:armhf (2.5.4-1) ... 386s Selecting previously unselected package python3-pil:armhf. 386s Preparing to unpack .../61-python3-pil_12.0.0-1ubuntu1_armhf.deb ... 386s Unpacking python3-pil:armhf (12.0.0-1ubuntu1) ... 386s Selecting previously unselected package python3.13-tk. 386s Preparing to unpack .../62-python3.13-tk_3.13.11-1_armhf.deb ... 386s Unpacking python3.13-tk (3.13.11-1) ... 386s Selecting previously unselected package python3.14-tk. 386s Preparing to unpack .../63-python3.14-tk_3.14.2-1_armhf.deb ... 386s Unpacking python3.14-tk (3.14.2-1) ... 386s Selecting previously unselected package python3-tk. 386s Preparing to unpack .../64-python3-tk_3.13.9-3_armhf.deb ... 386s Unpacking python3-tk (3.13.9-3) ... 386s Selecting previously unselected package python3-pil.imagetk:armhf. 386s Preparing to unpack .../65-python3-pil.imagetk_12.0.0-1ubuntu1_armhf.deb ... 386s Unpacking python3-pil.imagetk:armhf (12.0.0-1ubuntu1) ... 386s Selecting previously unselected package python3-cycler. 386s Preparing to unpack .../66-python3-cycler_0.12.1-2_all.deb ... 386s Unpacking python3-cycler (0.12.1-2) ... 386s Selecting previously unselected package python3-lxml:armhf. 386s Preparing to unpack .../67-python3-lxml_6.0.2-1_armhf.deb ... 386s Unpacking python3-lxml:armhf (6.0.2-1) ... 387s Selecting previously unselected package python3-lz4. 387s Preparing to unpack .../68-python3-lz4_4.4.5+dfsg-1_armhf.deb ... 387s Unpacking python3-lz4 (4.4.5+dfsg-1) ... 387s Selecting previously unselected package python3-decorator. 387s Preparing to unpack .../69-python3-decorator_5.2.1-2_all.deb ... 387s Unpacking python3-decorator (5.2.1-2) ... 387s Selecting previously unselected package python3-scipy. 387s Preparing to unpack .../70-python3-scipy_1.16.3-4_armhf.deb ... 387s Unpacking python3-scipy (1.16.3-4) ... 388s Selecting previously unselected package python3-mpmath. 388s Preparing to unpack .../71-python3-mpmath_1.3.0-2_all.deb ... 388s Unpacking python3-mpmath (1.3.0-2) ... 388s Selecting previously unselected package python3-sympy. 388s Preparing to unpack .../72-python3-sympy_1.14.0-2_all.deb ... 388s Unpacking python3-sympy (1.14.0-2) ... 389s Selecting previously unselected package python3-ufolib2. 389s Preparing to unpack .../73-python3-ufolib2_0.18.1+dfsg1-1_all.deb ... 389s Unpacking python3-ufolib2 (0.18.1+dfsg1-1) ... 389s Selecting previously unselected package python3-zopfli. 389s Preparing to unpack .../74-python3-zopfli_0.4.0-1_armhf.deb ... 389s Unpacking python3-zopfli (0.4.0-1) ... 389s Selecting previously unselected package unicode-data. 389s Preparing to unpack .../75-unicode-data_16.0.0-1build1_all.deb ... 389s Unpacking unicode-data (16.0.0-1build1) ... 390s Selecting previously unselected package python3-fonttools. 390s Preparing to unpack .../76-python3-fonttools_4.61.1-3_armhf.deb ... 390s Unpacking python3-fonttools (4.61.1-3) ... 390s Selecting previously unselected package python3-kiwisolver. 390s 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return p.returncode 440s Setting up liblapack3:armhf (3.12.1-7ubuntu1) ... 440s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 440s Setting up libpython3.14-stdlib:armhf (3.14.2-1) ... 440s Setting up fontconfig-config (2.17.1-3ubuntu1) ... 440s Setting up python3-pytest (9.0.2-2) ... 441s Setting up libwebpdemux2:armhf (1.5.0-0.1build1) ... 441s Setting up python3-nbformat (5.10.4-1) ... 442s Setting up python3-zopfli (0.4.0-1) ... 442s Setting up python3-pydantic (2.12.5-2) ... 443s Setting up libraqm0:armhf (0.10.3-1) ... 443s Setting up python3-plotly (5.20.0+dfsg-1.1) ... 469s Setting up python3-numpy (1:2.3.5+ds-3) ... 474s Setting up python3-lxml:armhf (6.0.2-1) ... 474s Setting up libtiff6:armhf (4.7.0-3ubuntu3) ... 474s Setting up python3-contourpy (1.3.3-1) ... 475s Setting up libfontconfig1:armhf (2.17.1-3ubuntu1) ... 475s Setting up python3.14 (3.14.2-1) ... 476s Setting up python3-spglib (2.7.0-1) ... 476s Setting up libxft2:armhf (2.3.6-1build2) ... 476s Setting up python3-scipy (1.16.3-4) ... 486s Setting up libtk8.6:armhf (8.6.17-1) ... 486s Setting up python3-pandas-lib:armhf (2.3.3+dfsg-3) ... 486s Setting up python3-all (3.13.9-3) ... 486s Setting up python3.13-tk (3.13.11-1) ... 486s Setting up python3-pil:armhf (12.0.0-1ubuntu1) ... 487s Setting up python3-pandas (2.3.3+dfsg-3) ... 499s Setting up python3-monty (2025.3.3-1) ... 500s Setting up python3.14-tk (3.14.2-1) ... 500s Setting up python3-tk (3.13.9-3) ... 500s Setting up python3-pil.imagetk:armhf (12.0.0-1ubuntu1) ... 500s Setting up python3-fonttools (4.61.1-3) ... 502s Setting up python3-ufolib2 (0.18.1+dfsg1-1) ... 503s Setting up python3-matplotlib (3.10.7+dfsg1-1) ... 507s Setting up python3-pymatgen (2025.2.18+dfsg1-5) ... 510s Setting up python3-custodian (2024.10.16-1) ... 511s Processing triggers for libc-bin (2.42-2ubuntu4) ... 511s Processing triggers for systemd (259-1ubuntu2) ... 511s Processing triggers for man-db (2.13.1-1) ... 520s autopkgtest [05:41:17]: test test-custodian: [----------------------- 522s ============================= test session starts ============================== 522s platform linux -- Python 3.14.2, pytest-9.0.2, pluggy-1.6.0 -- /usr/bin/python3.14 522s cachedir: .pytest_cache 522s rootdir: /tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests 522s plugins: typeguard-4.4.4 525s collecting ... collected 18 items / 13 errors / 3 skipped 525s 525s ==================================== ERRORS ==================================== 525s _________________ ERROR collecting tests/cp2k/test_handlers.py _________________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/cp2k/test_handlers.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 525s tests/cp2k/test_handlers.py:11: in 525s from pymatgen.io.cp2k.inputs import Keyword, KeywordList 525s /usr/lib/python3/dist-packages/pymatgen/io/cp2k/inputs.py:39: in 525s from pymatgen.core import Element 525s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 525s from pymatgen.core.lattice import Lattice 525s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 525s from pymatgen.util.coord import pbc_shortest_vectors 525s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 525s from pymatgen.util import coord_cython 525s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 525s ___________________ ERROR collecting tests/cp2k/test_jobs.py ___________________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/cp2k/test_jobs.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 525s tests/cp2k/test_jobs.py:10: in 525s from custodian.cp2k.jobs import Cp2kJob 525s /usr/lib/python3/dist-packages/custodian/cp2k/jobs.py:10: in 525s from pymatgen.io.cp2k.inputs import Cp2kInput, Keyword 525s /usr/lib/python3/dist-packages/pymatgen/io/cp2k/inputs.py:39: in 525s from pymatgen.core import Element 525s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 525s from pymatgen.core.lattice import Lattice 525s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 525s from pymatgen.util.coord import pbc_shortest_vectors 525s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 525s from pymatgen.util import coord_cython 525s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 525s _________________ ERROR collecting tests/feff/test_handlers.py _________________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/feff/test_handlers.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 525s tests/feff/test_handlers.py:6: in 525s from custodian.feff.handlers import UnconvergedErrorHandler 525s /usr/lib/python3/dist-packages/custodian/feff/handlers.py:9: in 525s from pymatgen.io.feff.sets import FEFFDictSet 525s /usr/lib/python3/dist-packages/pymatgen/io/feff/__init__.py:9: in 525s from .inputs import ( 525s /usr/lib/python3/dist-packages/pymatgen/io/feff/inputs.py:20: in 525s from pymatgen.core import Element, Lattice, Molecule, Structure 525s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 525s from pymatgen.core.lattice import Lattice 525s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 525s from pymatgen.util.coord import pbc_shortest_vectors 525s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 525s from pymatgen.util import coord_cython 525s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 525s ___________________ ERROR collecting tests/feff/test_jobs.py ___________________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/feff/test_jobs.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 525s tests/feff/test_jobs.py:5: in 525s from pymatgen.io.feff.inputs import Atoms, Tags 525s /usr/lib/python3/dist-packages/pymatgen/io/feff/__init__.py:9: in 525s from .inputs import ( 525s /usr/lib/python3/dist-packages/pymatgen/io/feff/inputs.py:20: in 525s from pymatgen.core import Element, Lattice, Molecule, Structure 525s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 525s from pymatgen.core.lattice import Lattice 525s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 525s from pymatgen.util.coord import pbc_shortest_vectors 525s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 525s from pymatgen.util import coord_cython 525s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 525s _______________ ERROR collecting tests/gaussian/test_handlers.py _______________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/gaussian/test_handlers.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 525s tests/gaussian/test_handlers.py:8: in 525s from custodian.gaussian.handlers import GaussianErrorHandler, WallTimeErrorHandler 525s /usr/lib/python3/dist-packages/custodian/gaussian/handlers.py:16: in 525s from pymatgen.io.gaussian import GaussianInput, GaussianOutput 525s /usr/lib/python3/dist-packages/pymatgen/io/gaussian.py:14: in 525s from pymatgen.core import Composition, Element, Molecule 525s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 525s from pymatgen.core.lattice import Lattice 525s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 525s from pymatgen.util.coord import pbc_shortest_vectors 525s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 525s from pymatgen.util import coord_cython 525s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 525s _________________ ERROR collecting tests/gaussian/test_jobs.py _________________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/gaussian/test_jobs.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 525s tests/gaussian/test_jobs.py:7: in 525s from custodian.gaussian.jobs import GaussianJob 525s /usr/lib/python3/dist-packages/custodian/gaussian/jobs.py:12: in 525s from pymatgen.io.gaussian import GaussianInput, GaussianOutput 525s /usr/lib/python3/dist-packages/pymatgen/io/gaussian.py:14: in 525s from pymatgen.core import Composition, Element, Molecule 525s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 525s from pymatgen.core.lattice import Lattice 525s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 525s from pymatgen.util.coord import pbc_shortest_vectors 525s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 525s from pymatgen.util import coord_cython 525s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 525s _______________ ERROR collecting tests/lobster/test_handlers.py ________________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/lobster/test_handlers.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 525s tests/lobster/test_handlers.py:3: in 525s from custodian.lobster.handlers import ChargeSpillingValidator, EnoughBandsValidator, LobsterFilesValidator 525s /usr/lib/python3/dist-packages/custodian/lobster/handlers.py:5: in 525s from pymatgen.io.lobster import Lobsterout 525s /usr/lib/python3/dist-packages/pymatgen/io/lobster/__init__.py:10: in 525s from .inputs import Lobsterin 525s /usr/lib/python3/dist-packages/pymatgen/io/lobster/inputs.py:26: in 525s from pymatgen.core.structure import Structure 525s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 525s from pymatgen.core.lattice import Lattice 525s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 525s from pymatgen.util.coord import pbc_shortest_vectors 525s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 525s from pymatgen.util import coord_cython 525s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 525s ________________ ERROR collecting tests/nwchem/test_handlers.py ________________ 525s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/nwchem/test_handlers.py'. 525s Hint: make sure your test modules/packages have valid Python names. 525s Traceback: 525s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 525s return _bootstrap._gcd_import(name[level:], package, level) 525s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 526s tests/nwchem/test_handlers.py:5: in 526s from custodian.nwchem.handlers import NwchemErrorHandler 526s /usr/lib/python3/dist-packages/custodian/nwchem/handlers.py:8: in 526s from pymatgen.io.nwchem import NwInput, NwOutput 526s /usr/lib/python3/dist-packages/pymatgen/io/nwchem.py:33: in 526s from pymatgen.analysis.excitation import ExcitationSpectrum 526s /usr/lib/python3/dist-packages/pymatgen/analysis/excitation.py:5: in 526s from pymatgen.core.spectrum import Spectrum 526s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 526s from pymatgen.core.lattice import Lattice 526s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 526s from pymatgen.util.coord import pbc_shortest_vectors 526s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 526s from pymatgen.util import coord_cython 526s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 526s _________________ ERROR collecting tests/vasp/test_handlers.py _________________ 526s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/vasp/test_handlers.py'. 526s Hint: make sure your test modules/packages have valid Python names. 526s Traceback: 526s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 526s return _bootstrap._gcd_import(name[level:], package, level) 526s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 526s tests/vasp/test_handlers.py:10: in 526s from pymatgen.io.vasp.inputs import Incar, Kpoints, Structure, VaspInput 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 526s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:35: in 526s from pymatgen.core import SETTINGS, Element, Lattice, Structure, get_el_sp 526s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 526s from pymatgen.core.lattice import Lattice 526s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 526s from pymatgen.util.coord import pbc_shortest_vectors 526s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 526s from pymatgen.util import coord_cython 526s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 526s ____________________ ERROR collecting tests/vasp/test_io.py ____________________ 526s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/vasp/test_io.py'. 526s Hint: make sure your test modules/packages have valid Python names. 526s Traceback: 526s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 526s return _bootstrap._gcd_import(name[level:], package, level) 526s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 526s tests/vasp/test_io.py:5: in 526s from custodian.vasp.io import load_outcar, load_vasprun 526s /usr/lib/python3/dist-packages/custodian/vasp/io.py:3: in 526s from pymatgen.io.vasp.outputs import Outcar, Vasprun 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 526s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:35: in 526s from pymatgen.core import SETTINGS, Element, Lattice, Structure, get_el_sp 526s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 526s from pymatgen.core.lattice import Lattice 526s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 526s from pymatgen.util.coord import pbc_shortest_vectors 526s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 526s from pymatgen.util import coord_cython 526s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 526s ___________________ ERROR collecting tests/vasp/test_jobs.py ___________________ 526s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/vasp/test_jobs.py'. 526s Hint: make sure your test modules/packages have valid Python names. 526s Traceback: 526s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 526s return _bootstrap._gcd_import(name[level:], package, level) 526s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 526s tests/vasp/test_jobs.py:10: in 526s from pymatgen.io.vasp import Incar, Kpoints, Poscar 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 526s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:35: in 526s from pymatgen.core import SETTINGS, Element, Lattice, Structure, get_el_sp 526s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 526s from pymatgen.core.lattice import Lattice 526s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 526s from pymatgen.util.coord import pbc_shortest_vectors 526s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 526s from pymatgen.util import coord_cython 526s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 526s __________________ ERROR collecting tests/vasp/test_utils.py ___________________ 526s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/vasp/test_utils.py'. 526s Hint: make sure your test modules/packages have valid Python names. 526s Traceback: 526s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 526s return _bootstrap._gcd_import(name[level:], package, level) 526s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 526s tests/vasp/test_utils.py:8: in 526s from pymatgen.core import Lattice, Structure 526s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 526s from pymatgen.core.lattice import Lattice 526s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 526s from pymatgen.util.coord import pbc_shortest_vectors 526s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 526s from pymatgen.util import coord_cython 526s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 526s ________________ ERROR collecting tests/vasp/test_validators.py ________________ 526s ImportError while importing test module '/tmp/autopkgtest.hWCKQ5/autopkgtest_tmp/runtests/tests/vasp/test_validators.py'. 526s Hint: make sure your test modules/packages have valid Python names. 526s Traceback: 526s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 526s return _bootstrap._gcd_import(name[level:], package, level) 526s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 526s tests/vasp/test_validators.py:6: in 526s from custodian.vasp.validators import VaspAECCARValidator, VaspFilesValidator, VaspNpTMDValidator, VasprunXMLValidator 526s /usr/lib/python3/dist-packages/custodian/vasp/validators.py:9: in 526s from pymatgen.io.vasp import Chgcar, Incar 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 526s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 526s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:35: in 526s from pymatgen.core import SETTINGS, Element, Lattice, Structure, get_el_sp 526s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:13: in 526s from pymatgen.core.lattice import Lattice 526s /usr/lib/python3/dist-packages/pymatgen/core/lattice.py:21: in 526s from pymatgen.util.coord import pbc_shortest_vectors 526s /usr/lib/python3/dist-packages/pymatgen/util/coord.py:15: in 526s from pymatgen.util import coord_cython 526s E ImportError: cannot import name 'coord_cython' from 'pymatgen.util' (/usr/lib/python3/dist-packages/pymatgen/util/__init__.py) 526s =========================== short test summary info ============================ 526s ERROR tests/cp2k/test_handlers.py 526s ERROR tests/cp2k/test_jobs.py 526s ERROR tests/feff/test_handlers.py 526s ERROR tests/feff/test_jobs.py 526s ERROR tests/gaussian/test_handlers.py 526s ERROR tests/gaussian/test_jobs.py 526s ERROR tests/lobster/test_handlers.py 526s ERROR tests/nwchem/test_handlers.py 526s ERROR tests/vasp/test_handlers.py 526s ERROR tests/vasp/test_io.py 526s ERROR tests/vasp/test_jobs.py 526s ERROR tests/vasp/test_utils.py 526s ERROR tests/vasp/test_validators.py 526s !!!!!!!!!!!!!!!!!!! Interrupted: 13 errors during collection !!!!!!!!!!!!!!!!!!! 526s ======================== 3 skipped, 13 errors in 2.81s ========================= 526s autopkgtest [05:41:23]: test test-custodian: -----------------------] 530s autopkgtest [05:41:27]: test test-custodian: - - - - - - - - - - results - - - - - - - - - - 530s test-custodian FAIL non-zero exit status 2 534s autopkgtest [05:41:31]: @@@@@@@@@@@@@@@@@@@@ summary 534s test-custodian FAIL non-zero exit status 2