0s autopkgtest [15:36:02]: starting date and time: 2025-10-18 15:36:02+0000 0s autopkgtest [15:36:02]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [15:36:02]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9l2f_akt/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,localhost,localdomain,internal,login.ubuntu.com,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults --apt-upgrade bedops --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.13.7-2 -- lxd -r lxd-armhf-10.145.243.160 lxd-armhf-10.145.243.160:autopkgtest/ubuntu/resolute/armhf 20s autopkgtest [15:36:22]: testbed dpkg architecture: armhf 22s autopkgtest [15:36:24]: testbed apt version: 3.1.6ubuntu2 25s autopkgtest [15:36:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 27s autopkgtest [15:36:29]: testbed release detected to be: None 36s autopkgtest [15:36:38]: updating testbed package index (apt update) 39s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 39s Get:2 http://ftpmaster.internal/ubuntu resolute InRelease [83.3 kB] 39s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 39s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 39s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [15.4 kB] 39s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [345 kB] 39s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 39s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [28.4 kB] 39s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf Packages [67.3 kB] 39s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted armhf Packages [940 B] 39s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe armhf Packages [214 kB] 39s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse armhf Packages [2804 B] 39s Get:13 http://ftpmaster.internal/ubuntu resolute/main Sources [1399 kB] 39s Get:14 http://ftpmaster.internal/ubuntu resolute/multiverse Sources [307 kB] 40s Get:15 http://ftpmaster.internal/ubuntu resolute/restricted Sources [14.4 kB] 40s Get:16 http://ftpmaster.internal/ubuntu resolute/universe Sources [21.1 MB] 40s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf Packages [1357 kB] 40s Get:18 http://ftpmaster.internal/ubuntu resolute/restricted armhf Packages [1672 B] 40s Get:19 http://ftpmaster.internal/ubuntu resolute/universe armhf Packages [14.8 MB] 41s Get:20 http://ftpmaster.internal/ubuntu resolute/multiverse armhf Packages [182 kB] 44s Fetched 40.0 MB in 5s (7922 kB/s) 45s Reading package lists... 51s autopkgtest [15:36:53]: upgrading testbed (apt dist-upgrade and autopurge) 52s Reading package lists... 53s Building dependency tree... 53s Reading state information... 53s Calculating upgrade... 54s The following packages will be upgraded: 54s apparmor apt base-files binutils binutils-arm-linux-gnueabihf 54s binutils-common cloud-init cloud-init-base distro-info-data gcc-15-base 54s gir1.2-girepository-2.0 libapparmor1 libapt-pkg7.0 libatomic1 libbinutils 54s libctf-nobfd0 libctf0 libgcc-s1 libgirepository-1.0-1 libpython3-stdlib 54s libsframe2 libstdc++6 lto-disabled-list python3 python3-minimal sudo-rs 54s 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 54s Need to get 7366 kB of archives. 54s After this operation, 14.3 kB of additional disk space will be used. 54s Get:1 http://ftpmaster.internal/ubuntu resolute/main armhf base-files armhf 14ubuntu4 [75.4 kB] 54s Get:2 http://ftpmaster.internal/ubuntu resolute/main armhf libatomic1 armhf 15.2.0-5ubuntu1 [7942 B] 54s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf gcc-15-base armhf 15.2.0-5ubuntu1 [58.1 kB] 54s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libgcc-s1 armhf 15.2.0-5ubuntu1 [40.6 kB] 54s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libstdc++6 armhf 15.2.0-5ubuntu1 [731 kB] 54s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf libapt-pkg7.0 armhf 3.1.8ubuntu1 [1148 kB] 54s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf apt armhf 3.1.8ubuntu1 [1404 kB] 54s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3-minimal armhf 3.13.7-2 [27.8 kB] 54s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf python3 armhf 3.13.7-2 [23.9 kB] 54s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main armhf libpython3-stdlib armhf 3.13.7-2 [10.6 kB] 54s Get:11 http://ftpmaster.internal/ubuntu resolute/main armhf distro-info-data all 0.67~ubuntu1 [7004 B] 54s Get:12 http://ftpmaster.internal/ubuntu resolute/main armhf libgirepository-1.0-1 armhf 1.86.0-6 [111 kB] 54s Get:13 http://ftpmaster.internal/ubuntu resolute/main armhf gir1.2-girepository-2.0 armhf 1.86.0-6 [25.3 kB] 54s Get:14 http://ftpmaster.internal/ubuntu resolute/main armhf libapparmor1 armhf 5.0.0~alpha1-0ubuntu8.1 [52.9 kB] 54s Get:15 http://ftpmaster.internal/ubuntu resolute/main armhf sudo-rs armhf 0.2.8-1ubuntu5.1 [548 kB] 54s Get:16 http://ftpmaster.internal/ubuntu resolute/main armhf apparmor armhf 5.0.0~alpha1-0ubuntu8.1 [631 kB] 54s Get:17 http://ftpmaster.internal/ubuntu resolute/main armhf libctf0 armhf 2.45-7ubuntu2 [75.7 kB] 54s Get:18 http://ftpmaster.internal/ubuntu resolute/main armhf libctf-nobfd0 armhf 2.45-7ubuntu2 [79.1 kB] 55s Get:19 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-arm-linux-gnueabihf armhf 2.45-7ubuntu2 [1022 kB] 55s Get:20 http://ftpmaster.internal/ubuntu resolute/main armhf libbinutils armhf 2.45-7ubuntu2 [411 kB] 55s Get:21 http://ftpmaster.internal/ubuntu resolute/main armhf binutils armhf 2.45-7ubuntu2 [3240 B] 55s Get:22 http://ftpmaster.internal/ubuntu resolute/main armhf binutils-common armhf 2.45-7ubuntu2 [220 kB] 55s Get:23 http://ftpmaster.internal/ubuntu resolute/main armhf libsframe2 armhf 2.45-7ubuntu2 [13.4 kB] 55s Get:24 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init-base all 25.3-0ubuntu1 [625 kB] 55s Get:25 http://ftpmaster.internal/ubuntu resolute/main armhf cloud-init all 25.3-0ubuntu1 [2106 B] 55s Get:26 http://ftpmaster.internal/ubuntu resolute/main armhf lto-disabled-list all 71 [12.5 kB] 55s Preconfiguring packages ... 55s Fetched 7366 kB in 1s (8479 kB/s) 55s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 55s Preparing to unpack .../base-files_14ubuntu4_armhf.deb ... 55s Unpacking base-files (14ubuntu4) over (14ubuntu3) ... 56s Setting up base-files (14ubuntu4) ... 56s Installing new version of config file /etc/issue ... 56s Installing new version of config file /etc/issue.net ... 56s Installing new version of config file /etc/lsb-release ... 56s motd-news.service is a disabled or a static unit not running, not starting it. 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 56s Preparing to unpack .../libatomic1_15.2.0-5ubuntu1_armhf.deb ... 56s Unpacking libatomic1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 56s Preparing to unpack .../gcc-15-base_15.2.0-5ubuntu1_armhf.deb ... 56s Unpacking gcc-15-base:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 56s Setting up gcc-15-base:armhf (15.2.0-5ubuntu1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 57s Preparing to unpack .../libgcc-s1_15.2.0-5ubuntu1_armhf.deb ... 57s Unpacking libgcc-s1:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 57s Setting up libgcc-s1:armhf (15.2.0-5ubuntu1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 57s Preparing to unpack .../libstdc++6_15.2.0-5ubuntu1_armhf.deb ... 57s Unpacking libstdc++6:armhf (15.2.0-5ubuntu1) over (15.2.0-4ubuntu4) ... 57s Setting up libstdc++6:armhf (15.2.0-5ubuntu1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 57s Preparing to unpack .../libapt-pkg7.0_3.1.8ubuntu1_armhf.deb ... 57s Unpacking libapt-pkg7.0:armhf (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 57s Setting up libapt-pkg7.0:armhf (3.1.8ubuntu1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 57s Preparing to unpack .../apt_3.1.8ubuntu1_armhf.deb ... 57s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 57s Setting up apt (3.1.8ubuntu1) ... 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 58s Preparing to unpack .../python3-minimal_3.13.7-2_armhf.deb ... 58s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 58s Setting up python3-minimal (3.13.7-2) ... 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 58s Preparing to unpack .../00-python3_3.13.7-2_armhf.deb ... 58s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 58s Preparing to unpack .../01-libpython3-stdlib_3.13.7-2_armhf.deb ... 58s Unpacking libpython3-stdlib:armhf (3.13.7-2) over (3.13.7-1) ... 58s Preparing to unpack .../02-distro-info-data_0.67~ubuntu1_all.deb ... 58s Unpacking distro-info-data (0.67~ubuntu1) over (0.66) ... 58s Preparing to unpack .../03-libgirepository-1.0-1_1.86.0-6_armhf.deb ... 58s Unpacking libgirepository-1.0-1:armhf (1.86.0-6) over (1.84.0-1) ... 58s Preparing to unpack .../04-gir1.2-girepository-2.0_1.86.0-6_armhf.deb ... 58s Unpacking gir1.2-girepository-2.0:armhf (1.86.0-6) over (1.84.0-1) ... 58s Preparing to unpack .../05-libapparmor1_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 58s Unpacking libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 58s Preparing to unpack .../06-sudo-rs_0.2.8-1ubuntu5.1_armhf.deb ... 58s Unpacking sudo-rs (0.2.8-1ubuntu5.1) over (0.2.8-1ubuntu5) ... 58s Preparing to unpack .../07-apparmor_5.0.0~alpha1-0ubuntu8.1_armhf.deb ... 60s Unpacking apparmor (5.0.0~alpha1-0ubuntu8.1) over (5.0.0~alpha1-0ubuntu8) ... 61s Preparing to unpack .../08-libctf0_2.45-7ubuntu2_armhf.deb ... 61s Unpacking libctf0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 61s Preparing to unpack .../09-libctf-nobfd0_2.45-7ubuntu2_armhf.deb ... 61s Unpacking libctf-nobfd0:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 61s Preparing to unpack .../10-binutils-arm-linux-gnueabihf_2.45-7ubuntu2_armhf.deb ... 61s Unpacking binutils-arm-linux-gnueabihf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 61s Preparing to unpack .../11-libbinutils_2.45-7ubuntu2_armhf.deb ... 61s Unpacking libbinutils:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 61s Preparing to unpack .../12-binutils_2.45-7ubuntu2_armhf.deb ... 61s Unpacking binutils (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 61s Preparing to unpack .../13-binutils-common_2.45-7ubuntu2_armhf.deb ... 61s Unpacking binutils-common:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 61s Preparing to unpack .../14-libsframe2_2.45-7ubuntu2_armhf.deb ... 61s Unpacking libsframe2:armhf (2.45-7ubuntu2) over (2.45-7ubuntu1) ... 61s Preparing to unpack .../15-cloud-init-base_25.3-0ubuntu1_all.deb ... 61s Unpacking cloud-init-base (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 62s Preparing to unpack .../16-cloud-init_25.3-0ubuntu1_all.deb ... 62s Unpacking cloud-init (25.3-0ubuntu1) over (25.3~2g890873f5-0ubuntu2) ... 62s Preparing to unpack .../17-lto-disabled-list_71_all.deb ... 62s Unpacking lto-disabled-list (71) over (69) ... 62s Setting up lto-disabled-list (71) ... 62s Setting up libapparmor1:armhf (5.0.0~alpha1-0ubuntu8.1) ... 62s Setting up distro-info-data (0.67~ubuntu1) ... 62s Setting up libsframe2:armhf (2.45-7ubuntu2) ... 62s Setting up binutils-common:armhf (2.45-7ubuntu2) ... 62s Setting up libctf-nobfd0:armhf (2.45-7ubuntu2) ... 62s Setting up apparmor (5.0.0~alpha1-0ubuntu8.1) ... 62s Installing new version of config file /etc/apparmor.d/fusermount3 ... 62s apparmor_parser: Unable to replace "lsb_release". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 62s 62s apparmor_parser: Unable to replace "kmod". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 62s 62s apparmor_parser: Unable to replace "nvidia_modprobe". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 62s 63s Reloading AppArmor profiles 63s /sbin/apparmor_parser: Unable to replace "1password". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "Discord". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "MongoDB Compass". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "balena-etcher". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "brave". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "buildah". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "cam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ch-checkns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ch-run". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "chrome". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "bwrap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "chromium". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "crun". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "vscode". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "devhelp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "babeld". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "element-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "epiphany". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "bgpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "bfdd". /sbin/apparmor_parser: Unable to replace "evolution". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "firefox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "flatpak". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "alsamixer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "dnstracer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "foliate". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "eigrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "geary". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "github-desktop". /sbin/apparmor_parser: Unable to replace "goldendict". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "fabricd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "dig". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "iotop-c". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "hostname". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "kchmviewer". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "keybase". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "fusermount3". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lc-compliance". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "Xorg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "isisd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "libcamerify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "linux-sandbox". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "loupe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ipa_verify". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "john". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ldpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "gs". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-attach". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-create". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-destroy". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-execute". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-stop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-unshare". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "linux-boot-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lxc-usernsexec". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "mmdebstrap". /sbin/apparmor_parser: Unable to replace "lsblk". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "msedge". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lsusb". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "compressor". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "locale". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "notepadqq". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "lsb_release". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "mosquitto". /sbin/apparmor_parser: Unable to replace "mbsync". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "opam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "obsidian". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "opera". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nslookup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nhrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "notify-send". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pageedit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nc.openbsd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "irssi". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ospf6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "kmod". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "nvidia_modprobe". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ospfd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "podman". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "os-prober". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pbrd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "polypane". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pathd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "privacybrowser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "qcam". /sbin/apparmor_parser: Unable to replace "qmapshack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "qutebrowser". /sbin/apparmor_parser: Unable to replace "pim6d". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "QtWebEngineProcess". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "plasmashell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "pimd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "rootlesskit". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "rssguard". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "runc". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "rpm". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-abort". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "qpdf". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-adduser". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ripd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-apt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ripngd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-checkpackages". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-clean". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-distupgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-hold". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-destroychroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-createchroot". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-shell". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-unhold". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "scide". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-update". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "signal-desktop". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "slack". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "sbuild-upgrade". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "slirp4netns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "surfshark". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "steam". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "stress-ng". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "systemd-coredump". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "thunderbird". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "openvpn". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "staticd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "ssh-keyscan". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "proftpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "trinity". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tup". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tuxedo-control-center". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Unable to replace "tinyproxy". /sbin/apparmor_parser: Unable to replace "systemd-detect-virt". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 63s /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 63s 64s /sbin/apparmor_parser: Unable to replace "unprivileged_userns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "userbindmount". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "mx-extract". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "rygel". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "unix-chkpwd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_apt_news". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "/usr/bin/man". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "uwsgi-core". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "/usr/sbin/chronyd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "vdens". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "virtiofsd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "vivaldi-bin". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "vpnns". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "wg". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "cmds". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "tnftp". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "rsyslogd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "vrrpd". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "wpcom". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "wike". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "who". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "dumpcap". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "tshark". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "tcpdump". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "ip". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "wg-quick". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "znc". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "apt_methods". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "ubuntu_pro_esm_cache". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s /sbin/apparmor_parser: Unable to replace "transmission-cli". /sbin/apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 64s 64s Error: At least one profile failed to load 64s Setting up libatomic1:armhf (15.2.0-5ubuntu1) ... 64s Setting up libgirepository-1.0-1:armhf (1.86.0-6) ... 64s Setting up libbinutils:armhf (2.45-7ubuntu2) ... 64s Setting up sudo-rs (0.2.8-1ubuntu5.1) ... 64s Setting up libpython3-stdlib:armhf (3.13.7-2) ... 64s Setting up libctf0:armhf (2.45-7ubuntu2) ... 64s Setting up python3 (3.13.7-2) ... 64s Setting up cloud-init-base (25.3-0ubuntu1) ... 66s Setting up gir1.2-girepository-2.0:armhf (1.86.0-6) ... 66s Setting up binutils-arm-linux-gnueabihf (2.45-7ubuntu2) ... 66s Setting up cloud-init (25.3-0ubuntu1) ... 66s Setting up binutils (2.45-7ubuntu2) ... 66s Processing triggers for plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu1) ... 66s Processing triggers for procps (2:4.0.4-8ubuntu3) ... 66s Processing triggers for install-info (7.1.1-1ubuntu1) ... 66s Processing triggers for libc-bin (2.42-0ubuntu3) ... 66s Processing triggers for rsyslog (8.2504.0-1ubuntu2) ... 66s Processing triggers for systemd (257.9-0ubuntu2) ... 66s Processing triggers for man-db (2.13.1-1) ... 71s Reading package lists... 72s Building dependency tree... 72s Reading state information... 72s Solving dependencies... 73s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 74s autopkgtest [15:37:16]: rebooting testbed after setup commands that affected boot 113s autopkgtest [15:37:55]: testbed running kernel: Linux 6.8.0-58-generic #60~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Fri Mar 28 14:48:37 UTC 2 136s autopkgtest [15:38:18]: @@@@@@@@@@@@@@@@@@@@ apt-source bedops 150s Get:1 http://ftpmaster.internal/ubuntu resolute/universe bedops 2.4.41+dfsg-3 (dsc) [2227 B] 150s Get:2 http://ftpmaster.internal/ubuntu resolute/universe bedops 2.4.41+dfsg-3 (tar) [13.5 MB] 150s Get:3 http://ftpmaster.internal/ubuntu resolute/universe bedops 2.4.41+dfsg-3 (diff) [10.9 kB] 150s gpgv: Signature made Tue Dec 17 17:01:06 2024 UTC 150s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 150s gpgv: issuer "crusoe@debian.org" 150s gpgv: Can't check signature: No public key 150s dpkg-source: warning: cannot verify inline signature for ./bedops_2.4.41+dfsg-3.dsc: no acceptable signature found 151s autopkgtest [15:38:33]: testing package bedops version 2.4.41+dfsg-3 153s autopkgtest [15:38:35]: build not needed 155s autopkgtest [15:38:37]: test run-unit-test: preparing testbed 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 158s Solving dependencies... 158s The following NEW packages will be installed: 158s bedops bedops-doc fonts-mathjax libjs-jquery libjs-mathjax libjs-sphinxdoc 158s libjs-underscore tcsh 159s 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. 159s Need to get 32.1 MB of archives. 159s After this operation, 86.0 MB of additional disk space will be used. 159s Get:1 http://ftpmaster.internal/ubuntu resolute/universe armhf tcsh armhf 6.24.13-2 [417 kB] 159s Get:2 http://ftpmaster.internal/ubuntu resolute/universe armhf bedops armhf 2.4.41+dfsg-3 [1456 kB] 159s Get:3 http://ftpmaster.internal/ubuntu resolute/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 159s Get:4 http://ftpmaster.internal/ubuntu resolute/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 159s Get:5 http://ftpmaster.internal/ubuntu resolute/main armhf libjs-sphinxdoc all 8.2.3-1ubuntu2 [28.0 kB] 159s Get:6 http://ftpmaster.internal/ubuntu resolute/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 159s Get:7 http://ftpmaster.internal/ubuntu resolute/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 159s Get:8 http://ftpmaster.internal/ubuntu resolute/universe armhf bedops-doc all 2.4.41+dfsg-3 [21.8 MB] 160s Fetched 32.1 MB in 1s (23.3 MB/s) 160s Selecting previously unselected package tcsh. 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61081 files and directories currently installed.) 160s Preparing to unpack .../0-tcsh_6.24.13-2_armhf.deb ... 160s Unpacking tcsh (6.24.13-2) ... 160s Selecting previously unselected package bedops. 160s Preparing to unpack .../1-bedops_2.4.41+dfsg-3_armhf.deb ... 160s Unpacking bedops (2.4.41+dfsg-3) ... 161s Selecting previously unselected package libjs-jquery. 161s Preparing to unpack .../2-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 161s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 161s Selecting previously unselected package libjs-underscore. 161s Preparing to unpack .../3-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 161s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 161s Selecting previously unselected package libjs-sphinxdoc. 161s Preparing to unpack .../4-libjs-sphinxdoc_8.2.3-1ubuntu2_all.deb ... 161s Unpacking libjs-sphinxdoc (8.2.3-1ubuntu2) ... 161s Selecting previously unselected package fonts-mathjax. 161s Preparing to unpack .../5-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 161s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 161s Selecting previously unselected package libjs-mathjax. 161s Preparing to unpack .../6-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 161s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 162s Selecting previously unselected package bedops-doc. 162s Preparing to unpack .../7-bedops-doc_2.4.41+dfsg-3_all.deb ... 162s Unpacking bedops-doc (2.4.41+dfsg-3) ... 162s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 162s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 162s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 162s Setting up tcsh (6.24.13-2) ... 162s update-alternatives: using /bin/tcsh to provide /bin/csh (csh) in auto mode 162s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 162s Setting up libjs-sphinxdoc (8.2.3-1ubuntu2) ... 162s Setting up bedops (2.4.41+dfsg-3) ... 162s Setting up bedops-doc (2.4.41+dfsg-3) ... 162s Processing triggers for man-db (2.13.1-1) ... 162s Processing triggers for debianutils (5.23.2) ... 172s autopkgtest [15:38:54]: test run-unit-test: [----------------------- 174s Testing bedops 174s Testing binary [bedops] and build type [] 174s make[1]: Entering directory '/tmp/autopkgtest.ZeYh7D/autopkgtest_tmp/tests/bedops' 174s Missing binary [bedops] for build type [] 174s Writing to [/tmp/tmp.nRNE4Gp4L8] 174s bedops --version 174s bedops 174s citation: http://bioinformatics.oxfordjournals.org/content/28/14/1919.abstract 174s https://doi.org/10.1093/bioinformatics/bts277 174s version: 2.4.41 (typical) 174s authors: Shane Neph & Scott Kuehn 174s [bedops- --merge] - [Test 001] ...passed! 174s [bedops- --merge] - [Test 002] ...passed! 174s [bedops- --merge] - [Test 003] ...passed! 174s [bedops- --merge] - [Test 004] ...passed! 174s [bedops- --merge] - [Test 005] ...passed! 174s [bedops- --merge] - [Test 006] ...passed! 174s [bedops- --merge] - [Test 007] ...passed! 174s [bedops- --merge] - [Test 008] ...passed! 174s [bedops- --merge] - [Test 009] ...passed! 174s [bedops- --complement] - [Test 001] ...passed! 174s [bedops- --complement] - [Test 002] ...passed! 174s [bedops- --complement] - [Test 003] ...passed! 174s [bedops- --complement] - [Test 004] ...passed! 174s [bedops- --complement] - [Test 005] ...passed! 174s [bedops- --complement] - [Test 006] ...passed! 174s [bedops- --complement] - [Test 007] ...passed! 174s [bedops- --complement] - [Test 008] ...passed! 174s [bedops- --complement] - [Test 009] ...passed! 174s [bedops- --intersection] - [Test 001] ...passed! 174s [bedops- --intersection] - [Test 002] ...passed! 174s [bedops- --intersection] - [Test 003] ...passed! 174s [bedops- --intersection] - [Test 004] ...passed! 174s [bedops- --difference] - [Test 001] ...passed! 174s [bedops- --difference] - [Test 002] ...passed! 174s [bedops- --difference] - [Test 003] ...passed! 174s [bedops- --difference] - [Test 004] ...passed! 174s [bedops- --difference] - [Test 005] ...passed! 174s [bedops- --difference] - [Test 006] ...passed! 174s [bedops- --difference] - [Test 007] ...passed! 174s [bedops- --symdiff] - [Test 001] ...passed! 174s [bedops- --symdiff] - [Test 002] ...passed! 174s [bedops- --symdiff] - [Test 003] ...passed! 174s [bedops- --symdiff] - [Test 004] ...passed! 175s [bedops- --symdiff] - [Test 005] ...passed! 175s [bedops- --element-of] - [Test 001] ...passed! 175s [bedops- --element-of] - [Test 002] ...passed! 175s [bedops- --element-of] - [Test 003] ...passed! 175s [bedops- --element-of] - [Test 004] ...passed! 175s [bedops- --not-element-of] - [Test 001] ...passed! 175s [bedops- --not-element-of] - [Test 002] ...passed! 175s [bedops- --not-element-of] - [Test 003] ...passed! 175s [bedops- --union] - [Test 001] ...passed! 175s [bedops- --union] - [Test 002] ...passed! 175s [bedops- --union] - [Test 003] ...passed! 175s [bedops- --union] - [Test 004] ...passed! 175s [bedops- --union] - [Test 005] ...passed! 175s [bedops- --union] - [Test 006] ...passed! 175s [bedops- --union] - [Test 007] ...passed! 175s [bedops- --union] - [Test 008] ...passed! 175s [bedops- --union] - [Test 009] ...passed! 175s [bedops- --partition] - [Test 001] ...passed! 175s [bedops- --partition] - [Test 002] ...passed! 175s [bedops- --partition] - [Test 003] ...passed! 175s [bedops- --partition] - [Test 004] ...passed! 175s [bedops- --partition] - [Test 005] ...passed! 175s [bedops- --chrom] - [Test 001] ...passed! 175s [bedops- --chrom] - [Test 002] ...passed! 175s [bedops- --chrom] - [Test 003] ...passed! 175s [bedops- --chrom] - [Test 004] ...passed! 175s [bedops- --chop] - [Test 001] ...passed! 175s [bedops- --chop] - [Test 002] ...passed! 175s [bedops- --chop] - [Test 003] ...passed! 175s [bedops- --chop] - [Test 004] ...passed! 175s [bedops- --chop] - [Test 005] ...passed! 175s [bedops- --stdin] - [Test 001] ...passed! 175s [bedops- --named-pipe] - [Test 001] ...passed! 175s [bedops- --ec] - [Test 001] ...passed! (not expected to pass) 175s make[1]: Leaving directory '/tmp/autopkgtest.ZeYh7D/autopkgtest_tmp/tests/bedops' 175s make[1]: *** [Makefile:380: ec] Error 1 175s make: *** [Makefile:10: all] Error 2 175s Testing starch 175s Testing binary group [starch] and build type [] 175s make[1]: Entering directory '/tmp/autopkgtest.ZeYh7D/autopkgtest_tmp/tests/starch' 175s Missing binary [unstarch] for build type [] 175s Writing to [/tmp/tmp.JG6ig7snQU] 175s unstarch --version 175s unstarch 175s binary version: 2.4.41 (typical) (extracts archive version: 2.2.0 or older) 175s [starch-unstarch- --signature] - [Test 001] ...passed! 175s [starch-unstarch- --signature] - [Test 002] ...passed! 175s Missing binary [bedops-starch] for build type [] 175s bedops-starch --version 175s starch 175s binary version: 2.4.41 (typical) (creates archive version: 2.2.0) 175s Writing to [/tmp/tmp.JG6ig7snQU] 175s Missing binary [bedmap] for build type [] 175s bedmap --help 175s bedmap 175s citation: http://bioinformatics.oxfordjournals.org/content/28/14/1919.abstract 175s https://doi.org/10.1093/bioinformatics/bts277 175s version: 2.4.41 (typical) 175s authors: Shane Neph & Scott Kuehn 175s 175s USAGE: bedmap [process-flags] [overlap-option] [map-file] 175s Any input file must be sorted per the sort-bed utility. 175s The program accepts BED and Starch file formats. 175s You may use '-' for a BED file to indicate the input comes from stdin. 175s 175s Traverse , while applying on qualified, overlapping elements from 175s . Output is one line for each line in , sent to standard output. There 175s is no limit on the number of operations you can specify to compute in one bedmap call. 175s If is omitted, the given file is treated as both the and . 175s This usage is more efficient than specifying the same file twice. 175s Arguments may be given in any order before the input file(s). 175s 175s Process Flags: 175s -------- 175s --chrom Jump to and process data for given only. 175s --delim Change output delimiter from '|' to between columns (e.g. '\t'). 175s --ec Error check all input files (slower). 175s --faster (advanced) Strong input assumptions are made. Compatible with: 175s --bp-ovr, --range, --fraction-both, and --exact overlap options only. 175s --header Accept headers (VCF, GFF, SAM, BED, WIG) in any input file. 175s --help Print this message and exit successfully. 175s --min-memory Minimize memory usage (slower). 175s --multidelim Change delimiter of multi-value output columns from ';' to . 175s --prec Change the post-decimal precision of scores to . 0 <= . 175s --sci Use scientific notation for score outputs. 175s --skip-unmapped Print no output for a row with no mapped elements. 175s --sweep-all Ensure is read completely (helps to prevent broken pipes). 175s --unmapped-val Print on unmapped --echo-map* and --min/max-element* operations. 175s The default is to print nothing. 175s --version Print program information. 175s 175s 175s Overlap Options (At most, one may be selected. By default, --bp-ovr 1 is used): 175s -------- 175s --bp-ovr Require bp overlap between elements of input files. 175s --exact First 3 fields from must be identical to 's. 175s --fraction-both Both --fraction-ref and --fraction-map must be true to 175s qualify as overlapping. Expect 0 < val <= 1. 175s --fraction-either Either --fraction-ref or --fraction-map must be true to 175s qualify as overlapping. Expect 0 < val <= 1. 175s --fraction-map The fraction of the element's size from that must overlap 175s the element in . Expect 0 < val <= 1. 175s --fraction-ref The fraction of the element's size from that must overlap 175s an element in . Expect 0 < val <= 1. 175s --range Grab elements within bp of 's element, 175s where 0 <= int. --range 0 is an alias for --bp-ovr 1. 175s 175s 175s Operations: (Any number of operations may be used any number of times.) 175s ---------- 175s SCORE: 175s must have at least 3 columns and 5 columns. 175s 175s --cv The result of --stdev divided by the result of --mean. 175s --kth Generalized median. Report the value, x, such that the fraction 175s of overlapping elements' scores from is less than x, 175s and the fraction 1- of scores is greater than x. 0 < val <= 1. 175s --mad The median absolute deviation of overlapping elements in . 175s Multiply mad score by . 0 < mult, and mult is 1 by default. 175s --max The highest score from overlapping elements in . 175s --max-element A (non-random) highest-scoring and overlapping element in . 175s --max-element-rand A random highest-scoring and overlapping element in . 175s --mean The average score from overlapping elements in . 175s --median The median score from overlapping elements in . 175s --min The lowest score from overlapping elements in . 175s --min-element A (non-random) lowest-scoring and overlapping element in . 175s --min-element-rand A random lowest-scoring and overlapping element in . 175s --stdev The square root of the result of --variance. 175s --sum Accumulated scores from overlapping elements in . 175s --tmean The mean score from overlapping elements in , after 175s ignoring the bottom and top fractions of those scores. 175s 0 <= low <= 1. 0 <= hi <= 1. low+hi <= 1. 175s --variance The variance of scores from overlapping elements in . 175s --wmean Weighted mean, scaled in proportion to the coverage of the 175s element by each overlapping element. 175s 175s ---------- 175s NON-SCORE: 175s must have at least 3 columns. 175s For --echo-map-id/echo-map-id-uniq, must have at least 4 columns. 175s For --echo-map-score, must have at least 5 columns. 175s For all others, requires at least 3 columns. 175s 175s --bases The total number of overlapping bases from . 175s --bases-uniq The number of distinct bases from 's element covered by 175s overlapping elements in . 175s --bases-uniq-f The fraction of distinct bases from 's element covered by 175s overlapping elements in . 175s --count The number of overlapping elements in . 175s --echo Print each line from . 175s --echo-map List all overlapping elements from . 175s --echo-map-id List IDs from all overlapping elements. 175s --echo-map-id-uniq List unique IDs from overlapping elements. 175s --echo-map-range Print genomic range of overlapping elements from . 175s --echo-map-score List scores from overlapping elements. 175s --echo-map-size List the full length of every overlapping element. 175s --echo-overlap-size List lengths of overlaps. 175s --echo-ref-name Print the first 3 fields of using chrom:start-end format. 175s --echo-ref-row-id Print 'id-' followed by the line number of . 175s --echo-ref-size Print the length of each line from . 175s --indicator Print 1 if there exists an overlapping element in , 0 otherwise. 175s 175s 175s [starch-starch-API- --starch_api_bedmap] - [Test 001] ...passed! 175s Missing binary [bedops-starch] for build type [] 175s Writing to [/tmp/tmp.JG6ig7snQU] 175s bedops-starch --version 175s starch 175s binary version: 2.4.41 (typical) (creates archive version: 2.2.0) 175s Generating random intervals... 175s ./generate_random_intervals.sh /tmp/autopkgtest.ZeYh7D/autopkgtest_tmp/tests/starch/data/hg38.bed 3 10000 | sort-bed - > /tmp/tmp.JG6ig7snQU/random_intervals.bed 177s [starch-starch- --deflate_and_inflate_bzip2] - [Test 001] ...passed! 177s [starch-starch- --deflate_and_inflate_gz] - [Test 001] ...passed! 177s Removing [/tmp/tmp.JG6ig7snQU] 177s make[1]: Leaving directory '/tmp/autopkgtest.ZeYh7D/autopkgtest_tmp/tests/starch' 178s autopkgtest [15:39:00]: test run-unit-test: -----------------------] 181s run-unit-test PASS 181s autopkgtest [15:39:03]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 185s autopkgtest [15:39:07]: @@@@@@@@@@@@@@@@@@@@ summary 185s run-unit-test PASS