0s autopkgtest [17:30:20]: starting date and time: 2026-01-30 17:30:20+0000 0s autopkgtest [17:30:20]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [17:30:20]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hbm_pv9m/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rnetcdf --apt-upgrade r-cran-stars --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-rnetcdf/2.11-1-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-arm64-11.secgroup --name adt-resolute-arm64-r-cran-stars-20260130-173020-juju-7f2275-prod-proposed-migration-environment-2-22ddd426-b493-410d-9832-ecaf3e12bc07 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-arm64-r-cran-stars-20260130-173020-juju-7f2275-prod-proposed-migration-environment-2-22ddd426-b493-410d-9832-ecaf3e12bc07 from image adt/ubuntu-resolute-arm64-server-20260130.img (UUID d80a3628-95a8-4c17-a25a-26b02882b363)... 57s autopkgtest [17:31:17]: testbed dpkg architecture: arm64 57s autopkgtest [17:31:17]: testbed apt version: 3.1.14 57s autopkgtest [17:31:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 57s autopkgtest [17:31:17]: testbed release detected to be: None 58s autopkgtest [17:31:18]: updating testbed package index (apt update) 59s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 59s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 59s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 59s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 59s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1267 kB] 59s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [30.9 kB] 59s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [4676 B] 59s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [105 kB] 59s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [120 kB] 59s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [4276 B] 60s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [20.7 kB] 60s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [328 B] 60s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [995 kB] 60s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [28.6 kB] 60s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [23.7 kB] 60s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [988 B] 63s Fetched 2726 kB in 2s (1767 kB/s) 64s Reading package lists... 65s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 65s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 65s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 65s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 66s Reading package lists... 66s Reading package lists... 66s Building dependency tree... 66s Reading state information... 66s Calculating upgrade... 67s The following packages will be upgraded: 67s 3cpio bzip2 inetutils-telnet libbz2-1.0 libsqlite3-0 rng-tools-debian telnet 67s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 67s Need to get 1199 kB of archives. 67s After this operation, 62.5 kB disk space will be freed. 67s Get:1 http://ftpmaster.internal/ubuntu resolute/universe arm64 rng-tools-debian arm64 2.6build1 [44.3 kB] 67s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 bzip2 arm64 1.0.8-6build2 [34.0 kB] 67s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-1.0 arm64 1.0.8-6build2 [34.9 kB] 67s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libsqlite3-0 arm64 3.46.1-9 [711 kB] 67s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 inetutils-telnet arm64 2:2.7-2ubuntu1 [104 kB] 67s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 telnet all 0.17+2.7-2ubuntu1 [3636 B] 67s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 3cpio arm64 0.13.1-1ubuntu1 [267 kB] 67s dpkg-preconfigure: unable to re-open stdin: No such file or directory 67s Fetched 1199 kB in 0s (15.9 MB/s) 67s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 67s Preparing to unpack .../rng-tools-debian_2.6build1_arm64.deb ... 67s Unpacking rng-tools-debian (2.6build1) over (2.6) ... 67s Preparing to unpack .../bzip2_1.0.8-6build2_arm64.deb ... 67s Unpacking bzip2 (1.0.8-6build2) over (1.0.8-6build1) ... 68s Preparing to unpack .../libbz2-1.0_1.0.8-6build2_arm64.deb ... 68s Unpacking libbz2-1.0:arm64 (1.0.8-6build2) over (1.0.8-6build1) ... 68s Setting up libbz2-1.0:arm64 (1.0.8-6build2) ... 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 68s Preparing to unpack .../libsqlite3-0_3.46.1-9_arm64.deb ... 68s Unpacking libsqlite3-0:arm64 (3.46.1-9) over (3.46.1-8) ... 68s Preparing to unpack .../inetutils-telnet_2%3a2.7-2ubuntu1_arm64.deb ... 68s Unpacking inetutils-telnet (2:2.7-2ubuntu1) over (2:2.6-4ubuntu1) ... 68s Preparing to unpack .../telnet_0.17+2.7-2ubuntu1_all.deb ... 68s Unpacking telnet (0.17+2.7-2ubuntu1) over (0.17+2.6-4ubuntu1) ... 68s Preparing to unpack .../3cpio_0.13.1-1ubuntu1_arm64.deb ... 68s Unpacking 3cpio (0.13.1-1ubuntu1) over (0.12.0-1ubuntu1) ... 68s Setting up 3cpio (0.13.1-1ubuntu1) ... 68s Setting up libsqlite3-0:arm64 (3.46.1-9) ... 68s Setting up inetutils-telnet (2:2.7-2ubuntu1) ... 68s Setting up bzip2 (1.0.8-6build2) ... 68s Setting up rng-tools-debian (2.6build1) ... 69s Setting up telnet (0.17+2.7-2ubuntu1) ... 69s Processing triggers for man-db (2.13.1-1) ... 70s Processing triggers for libc-bin (2.42-2ubuntu4) ... 70s autopkgtest [17:31:30]: upgrading testbed (apt dist-upgrade and autopurge) 71s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s Calculating upgrade... 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 72s Solving dependencies... 72s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 73s autopkgtest [17:31:33]: rebooting testbed after setup commands that affected boot 111s autopkgtest [17:32:11]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:41:39 UTC 2026 113s autopkgtest [17:32:13]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-stars 115s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.6-8-1 (dsc) [2749 B] 115s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.6-8-1 (tar) [4038 kB] 115s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.6-8-1 (diff) [4400 B] 115s gpgv: Signature made Wed Feb 19 23:48:57 2025 UTC 115s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 115s gpgv: issuer "plessy@debian.org" 115s gpgv: Can't check signature: No public key 115s dpkg-source: warning: cannot verify inline signature for ./r-cran-stars_0.6-8-1.dsc: no acceptable signature found 115s autopkgtest [17:32:15]: testing package r-cran-stars version 0.6-8-1 116s autopkgtest [17:32:16]: build not needed 119s autopkgtest [17:32:19]: test run-unit-test: preparing testbed 119s Reading package lists... 119s Building dependency tree... 119s Reading state information... 120s Solving dependencies... 120s The following NEW packages will be installed: 120s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 120s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data 120s gdal-plugins javascript-common libabsl20260107 libaec0 libaom3 120s libarmadillo15 libarpack2t64 libavif16 libblas3 libblosc1 libcairo2 120s libcfitsio10t64 libdatrie1 libdav1d7 libde265-0 libdeflate0 libfontconfig1 120s libfreexl1 libfyba0t64 libgav1-2 libgdal38 libgeos-c1t64 libgeos3.14.1 120s libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 120s libharfbuzz0b libhdf4-0 libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 120s libheif-plugin-libde265 libheif1 libhwy1t64 libice6 libjbig0 libjpeg-turbo8 120s libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 120s libjs-highlight.js libjs-jquery libjs-jquery-datatables 120s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 120s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 120s libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 libkmlbase1t64 120s libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 120s liblua5.4-0 libminizip1t64 libmuparser2v5 libmysqlclient24 libnetcdf22 120s libodbc2 libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 120s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libpoppler147 120s libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 120s libspatialite8t64 libsuperlu7 libsz2 libtcl8.6 libthai-data libthai0 120s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 120s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 120s libxt6t64 libyuv0 mysql-common node-bootstrap-sass node-html5shiv 120s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 120s r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio 120s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-cftime 120s r-cran-class r-cran-classint r-cran-cli r-cran-clue r-cran-cluster 120s r-cran-codetools r-cran-collapse r-cran-commonmark r-cran-covr r-cran-cpp11 120s r-cran-crayon r-cran-cubelyr r-cran-curl r-cran-dbi r-cran-deldir 120s r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 120s r-cran-evaluate r-cran-exactextractr r-cran-fansi r-cran-farver 120s r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula r-cran-fs 120s r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 120s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 120s r-cran-gridextra r-cran-gstat r-cran-gtable r-cran-highr r-cran-htmltools 120s r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib 120s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later 120s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv 120s r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata 120s r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise 120s r-cran-mgcv r-cran-mime r-cran-misctools r-cran-ncdfgeom r-cran-ncmeta 120s r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict 120s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 120s r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx 120s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6 120s r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils 120s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex 120s r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot 120s r-cran-s2 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-sftime 120s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 120s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 120s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 120s r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils 120s r-cran-stars r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 120s r-cran-systemfonts r-cran-tensor r-cran-terra r-cran-testthat r-cran-tibble 120s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tweenr r-cran-units 120s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-waldo 120s r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml 120s r-cran-zoo unixodbc-common unzip x11-common xdg-utils zip 120s 0 upgraded, 292 newly installed, 0 to remove and 0 not upgraded. 120s Need to get 293 MB of archives. 120s After this operation, 788 MB of additional disk space will be used. 120s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 120s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 120s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 120s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 120s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 120s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 120s Get:7 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 120s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 120s Get:9 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-data all 3.12.1+dfsg-1 [278 kB] 120s Get:10 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-plugins arm64 3.12.1+dfsg-1 [26.8 kB] 120s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1 [4828 B] 120s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libabsl20260107 arm64 20260107.0-0ubuntu2 [563 kB] 120s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.5-1 [21.8 kB] 120s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libaom3 arm64 3.13.1-2 [1773 kB] 121s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 121s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 121s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 121s Get:18 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarpack2t64 arm64 3.9.1-6 [94.9 kB] 121s Get:19 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsuperlu7 arm64 7.0.1+dfsg1-2 [171 kB] 121s Get:20 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarmadillo15 arm64 1:15.2.1+dfsg-2 [108 kB] 121s Get:21 http://ftpmaster.internal/ubuntu resolute/universe arm64 libdav1d7 arm64 1.5.3-1 [297 kB] 121s Get:22 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgav1-2 arm64 0.20.0-2build1 [547 kB] 121s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB] 121s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 121s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libyuv0 arm64 0.0.1922.20260106-1 [160 kB] 121s Get:26 http://ftpmaster.internal/ubuntu resolute/universe arm64 libavif16 arm64 1.3.0-1ubuntu3 [112 kB] 121s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 libsnappy1v5 arm64 1.2.2-2 [30.1 kB] 121s Get:28 http://ftpmaster.internal/ubuntu resolute/universe arm64 libblosc1 arm64 1.21.5+ds-2 [25.9 kB] 121s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 121s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 121s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 121s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 121s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 121s Get:34 http://ftpmaster.internal/ubuntu resolute/universe arm64 libcfitsio10t64 arm64 4.6.3-1 [517 kB] 121s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 121s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 libde265-0 arm64 1.0.16-1build1 [148 kB] 121s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 121s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfyba0t64 arm64 4.1.1-11build2 [119 kB] 121s Get:39 http://ftpmaster.internal/ubuntu resolute/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [24.4 kB] 121s Get:40 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfreexl1 arm64 2.0.0-1build3 [42.4 kB] 121s Get:41 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos3.14.1 arm64 3.14.1-2 [935 kB] 121s Get:42 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos-c1t64 arm64 3.14.1-2 [110 kB] 121s Get:43 http://ftpmaster.internal/ubuntu resolute/universe arm64 proj-data all 9.7.1-1 [7950 kB] 121s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 121s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 121s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 121s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 121s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 121s Get:49 http://ftpmaster.internal/ubuntu resolute/universe arm64 libproj25 arm64 9.7.1-1 [1370 kB] 121s Get:50 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeotiff5 arm64 1.7.4-1 [58.9 kB] 121s Get:51 http://ftpmaster.internal/ubuntu resolute/main arm64 libgif7 arm64 5.2.2-1ubuntu3 [35.8 kB] 121s Get:52 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.5-1 [17.0 kB] 121s Get:53 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf4-0 arm64 4.3.1-2 [304 kB] 121s Get:54 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.6+repack-2 [1287 kB] 121s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-aomdec arm64 1.21.2-1 [13.9 kB] 121s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-libde265 arm64 1.21.2-1 [9696 B] 121s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif1 arm64 1.21.2-1 [502 kB] 121s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwy1t64 arm64 1.3.0-2 [513 kB] 121s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 liblcms2-2 arm64 2.17-1 [170 kB] 121s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libjxl0.11 arm64 0.11.1-6ubuntu1 [909 kB] 121s Get:61 http://ftpmaster.internal/ubuntu resolute/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB] 121s Get:62 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlbase1t64 arm64 1.3.0-13 [48.2 kB] 121s Get:63 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmldom1t64 arm64 1.3.0-13 [143 kB] 121s Get:64 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlengine1t64 arm64 1.3.0-13 [68.9 kB] 121s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 121s Get:66 http://ftpmaster.internal/ubuntu resolute/universe arm64 libmuparser2v5 arm64 2.3.4-2 [129 kB] 121s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 121s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 libmysqlclient24 arm64 8.4.8-0ubuntu1 [1244 kB] 121s Get:69 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-310 arm64 1.14.6+repack-2 [59.1 kB] 121s Get:70 http://ftpmaster.internal/ubuntu resolute/universe arm64 libnetcdf22 arm64 1:4.9.3-1build1 [555 kB] 121s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libltdl7 arm64 2.5.4-9 [43.3 kB] 121s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbc2 arm64 2.3.14-1 [143 kB] 121s Get:73 http://ftpmaster.internal/ubuntu resolute/main arm64 unixodbc-common all 2.3.14-1 [8792 B] 121s Get:74 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbcinst2 arm64 2.3.14-1 [30.6 kB] 121s Get:75 http://ftpmaster.internal/ubuntu resolute/main arm64 libopenjp2-7 arm64 2.5.4-1 [180 kB] 121s Get:76 http://ftpmaster.internal/ubuntu resolute/main arm64 libgpgmepp6t64 arm64 1.24.2-3ubuntu2 [117 kB] 121s Get:77 http://ftpmaster.internal/ubuntu resolute/main arm64 libpoppler147 arm64 25.03.0-11.1 [1149 kB] 121s Get:78 http://ftpmaster.internal/ubuntu resolute/main arm64 libpq5 arm64 18.1-2 [151 kB] 121s Get:79 http://ftpmaster.internal/ubuntu resolute/universe arm64 libqhull-r8.0 arm64 2020.2-8 [191 kB] 121s Get:80 http://ftpmaster.internal/ubuntu resolute/universe arm64 librttopo1 arm64 1.1.0-4 [190 kB] 121s Get:81 http://ftpmaster.internal/ubuntu resolute/universe arm64 libspatialite8t64 arm64 5.1.0-3ubuntu1 [1816 kB] 121s Get:82 http://ftpmaster.internal/ubuntu resolute/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build2 [913 kB] 121s Get:83 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgdal38 arm64 3.12.1+dfsg-1 [10.4 MB] 122s Get:84 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 122s Get:85 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.1-1 [510 kB] 122s Get:86 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 122s Get:87 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 122s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 122s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 122s Get:90 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 122s Get:91 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 122s Get:92 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 122s Get:93 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 122s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 122s Get:95 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 122s Get:96 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 122s Get:97 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 122s Get:98 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 122s Get:99 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 122s Get:100 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 122s Get:101 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-2 [41.3 kB] 122s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 122s Get:103 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 122s Get:104 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 122s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 122s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 122s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 122s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 122s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 122s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB] 122s Get:111 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [1024 kB] 122s Get:112 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 122s Get:113 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 122s Get:114 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 122s Get:115 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-data all 2.2.28-8 [19.3 kB] 122s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-0 arm64 2.2.28-8 [53.0 kB] 122s Get:117 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 122s Get:118 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 122s Get:119 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 122s Get:120 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 122s Get:121 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 122s Get:122 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 122s Get:123 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu2 [175 kB] 122s Get:124 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 122s Get:125 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 122s Get:126 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 123s Get:127 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 123s Get:128 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 123s Get:129 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 123s Get:130 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 123s Get:131 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 123s Get:132 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 123s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 123s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 123s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 123s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 123s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 123s Get:138 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 123s Get:139 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 123s Get:140 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 123s Get:141 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 123s Get:142 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 123s Get:143 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 123s Get:144 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 123s Get:145 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB] 123s Get:146 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 123s Get:147 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 123s Get:148 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-e1071 arm64 1.7-17-1 [576 kB] 123s Get:149 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-kernsmooth arm64 2.23-26-1build1 [93.6 kB] 123s Get:150 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-classint arm64 0.4-11+dfsg-1 [108 kB] 123s Get:151 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1build1 [855 kB] 123s Get:152 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.21-2 [83.6 kB] 123s Get:153 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 123s Get:154 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 123s Get:155 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB] 123s Get:156 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s2 arm64 1.1.9-1build1 [1766 kB] 124s Get:157 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-units arm64 0.8-7+dfsg-2 [289 kB] 124s Get:158 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sf arm64 1.0-19+dfsg-2build2 [3240 kB] 124s Get:159 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 124s Get:160 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 124s Get:161 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 124s Get:162 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 124s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB] 124s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 124s Get:165 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 124s Get:166 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 124s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 124s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 124s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 124s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 124s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 124s Get:172 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 124s Get:173 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 124s Get:174 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 124s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 124s Get:176 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 124s Get:177 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 124s Get:178 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 124s Get:179 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 124s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 124s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cftime all 1.7.2-1 [918 kB] 124s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cluster arm64 2.1.8.1-1 [569 kB] 124s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clue arm64 0.3-66-1 [967 kB] 124s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 124s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-collapse arm64 2.1.0-1 [3304 kB] 124s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 124s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 124s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rex all 1.2.1-1build1 [126 kB] 124s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 124s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 124s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 124s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 124s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 124s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 124s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 124s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cubelyr all 1.0.2-1 [347 kB] 124s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 124s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 124s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1build1 [1154 kB] 124s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 124s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 124s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sp arm64 1:2.2-0+dfsg-1 [1443 kB] 125s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-terra arm64 1.8-70-1build2 [4198 kB] 125s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-raster arm64 3.6-31-2 [3148 kB] 125s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-exactextractr arm64 0.10.0-1build2 [568 kB] 125s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 125s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 125s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 125s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 125s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-globals all 0.18.0-1 [158 kB] 125s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 125s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-parallelly arm64 1.42.0-1 [540 kB] 125s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 125s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 125s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 125s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 125s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB] 125s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 125s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mgcv arm64 1.9-4-1 [3546 kB] 125s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 125s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 125s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 125s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 125s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 125s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tweenr arm64 2.0.3-1 [404 kB] 125s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 125s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-systemfonts arm64 1.2.1-1 [302 kB] 125s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 126s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggforce arm64 0.4.2-1 [1778 kB] 126s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 126s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 126s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggthemes all 5.2.0-1 [760 kB] 126s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-goftest arm64 1.2-3-1build1 [61.3 kB] 126s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gridextra all 2.3-3build2 [1032 kB] 126s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-zoo arm64 1.8-15-1 [1025 kB] 126s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sftime all 0.2-0-6 [168 kB] 126s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xts arm64 0.14.1-1 [1189 kB] 126s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB] 126s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spacetime all 1.3-3-2 [2780 kB] 126s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stars all 0.6-8-1 [4414 kB] 126s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gstat arm64 2.1-3-2 [2328 kB] 126s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 126s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 126s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 126s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 126s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 126s Get:247 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 126s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 126s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lmtest arm64 0.9.40-1build1 [400 kB] 126s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lwgeom arm64 0.2-14-1 [394 kB] 126s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maps arm64 3.4.2.1-1 [2350 kB] 126s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB] 127s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB] 127s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 127s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maxlik all 1.5-2.2-1 [1115 kB] 127s Get:256 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-rnetcdf arm64 2.11-1-1 [236 kB] 127s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 127s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncmeta all 0.4.0-1 [362 kB] 127s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 127s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 127s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pcict arm64 0.5-4.4-1 [94.0 kB] 127s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 127s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.1.1-1 [131 kB] 127s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.1-1 [252 kB] 127s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 127s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rdpack all 2.6.3-1 [636 kB] 127s Get:267 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plm all 2.6-7-1 [1823 kB] 127s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 127s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-randomforest arm64 4.7-1.2-1 [216 kB] 127s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 127s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 127s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 127s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 127s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 127s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 127s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 127s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-6-1 [8270 kB] 128s Get:278 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 128s Get:279 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.utils arm64 3.1-3-1 [386 kB] 128s Get:280 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.data all 3.1-6-1 [4153 kB] 128s Get:281 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.univar arm64 3.1-2-1 [314 kB] 128s Get:282 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.geom arm64 3.3-6-1 [3941 kB] 128s Get:283 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.random arm64 3.3-3-1 [1163 kB] 128s Get:284 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tensor all 1.5-4build1 [16.3 kB] 128s Get:285 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.sparse arm64 3.1-0-1 [218 kB] 128s Get:286 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.explore arm64 3.3-4-1 [3272 kB] 128s Get:287 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.model arm64 3.3-4-1 [3398 kB] 128s Get:288 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.linnet arm64 3.2-5-1 [1507 kB] 128s Get:289 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat arm64 3.3-1-1 [4120 kB] 128s Get:290 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.2-1 [153 kB] 129s Get:291 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 129s Get:292 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 129s Preconfiguring packages ... 129s Fetched 293 MB in 9s (34.3 MB/s) 129s Selecting previously unselected package fonts-dejavu-mono. 130s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 130s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ... 130s Unpacking fonts-dejavu-mono (2.37-8build1) ... 130s Selecting previously unselected package fonts-dejavu-core. 130s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ... 130s Unpacking fonts-dejavu-core (2.37-8build1) ... 130s Selecting previously unselected package fontconfig-config. 130s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_arm64.deb ... 130s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 130s Selecting previously unselected package libfontconfig1:arm64. 130s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_arm64.deb ... 130s Unpacking libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 130s Selecting previously unselected package fontconfig. 130s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_arm64.deb ... 130s Unpacking fontconfig (2.17.1-3ubuntu1) ... 130s Selecting previously unselected package fonts-font-awesome. 130s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 130s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 130s Selecting previously unselected package fonts-glyphicons-halflings. 130s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 130s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 130s Selecting previously unselected package fonts-mathjax. 130s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 130s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 130s Selecting previously unselected package gdal-data. 130s Preparing to unpack .../008-gdal-data_3.12.1+dfsg-1_all.deb ... 130s Unpacking gdal-data (3.12.1+dfsg-1) ... 130s Selecting previously unselected package gdal-plugins:arm64. 130s Preparing to unpack .../009-gdal-plugins_3.12.1+dfsg-1_arm64.deb ... 130s Unpacking gdal-plugins:arm64 (3.12.1+dfsg-1) ... 130s Selecting previously unselected package javascript-common. 130s Preparing to unpack .../010-javascript-common_12+nmu1_all.deb ... 130s Unpacking javascript-common (12+nmu1) ... 130s Selecting previously unselected package libabsl20260107:arm64. 130s Preparing to unpack .../011-libabsl20260107_20260107.0-0ubuntu2_arm64.deb ... 130s Unpacking libabsl20260107:arm64 (20260107.0-0ubuntu2) ... 130s Selecting previously unselected package libaec0:arm64. 131s Preparing to unpack .../012-libaec0_1.1.5-1_arm64.deb ... 131s Unpacking libaec0:arm64 (1.1.5-1) ... 131s Selecting previously unselected package libaom3:arm64. 131s Preparing to unpack .../013-libaom3_3.13.1-2_arm64.deb ... 131s Unpacking libaom3:arm64 (3.13.1-2) ... 131s Selecting previously unselected package libblas3:arm64. 131s Preparing to unpack .../014-libblas3_3.12.1-7ubuntu1_arm64.deb ... 131s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 131s Selecting previously unselected package libgfortran5:arm64. 131s Preparing to unpack .../015-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 131s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 131s Selecting previously unselected package liblapack3:arm64. 131s Preparing to unpack .../016-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 131s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 131s Selecting previously unselected package libarpack2t64:arm64. 131s Preparing to unpack .../017-libarpack2t64_3.9.1-6_arm64.deb ... 131s Unpacking libarpack2t64:arm64 (3.9.1-6) ... 131s Selecting previously unselected package libsuperlu7:arm64. 131s Preparing to unpack .../018-libsuperlu7_7.0.1+dfsg1-2_arm64.deb ... 131s Unpacking libsuperlu7:arm64 (7.0.1+dfsg1-2) ... 131s Selecting previously unselected package libarmadillo15. 131s Preparing to unpack .../019-libarmadillo15_1%3a15.2.1+dfsg-2_arm64.deb ... 131s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 131s Selecting previously unselected package libdav1d7:arm64. 131s Preparing to unpack .../020-libdav1d7_1.5.3-1_arm64.deb ... 131s Unpacking libdav1d7:arm64 (1.5.3-1) ... 131s Selecting previously unselected package libgav1-2:arm64. 131s Preparing to unpack .../021-libgav1-2_0.20.0-2build1_arm64.deb ... 131s Unpacking libgav1-2:arm64 (0.20.0-2build1) ... 131s Selecting previously unselected package libjpeg-turbo8:arm64. 131s Preparing to unpack .../022-libjpeg-turbo8_2.1.5-4ubuntu2_arm64.deb ... 131s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 131s Selecting previously unselected package libjpeg8:arm64. 131s Preparing to unpack .../023-libjpeg8_8c-2ubuntu11_arm64.deb ... 131s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 131s Selecting previously unselected package libyuv0:arm64. 131s Preparing to unpack .../024-libyuv0_0.0.1922.20260106-1_arm64.deb ... 131s Unpacking libyuv0:arm64 (0.0.1922.20260106-1) ... 131s Selecting previously unselected package libavif16:arm64. 131s Preparing to unpack .../025-libavif16_1.3.0-1ubuntu3_arm64.deb ... 131s Unpacking libavif16:arm64 (1.3.0-1ubuntu3) ... 131s Selecting previously unselected package libsnappy1v5:arm64. 131s Preparing to unpack .../026-libsnappy1v5_1.2.2-2_arm64.deb ... 131s Unpacking libsnappy1v5:arm64 (1.2.2-2) ... 131s Selecting previously unselected package libblosc1:arm64. 131s Preparing to unpack .../027-libblosc1_1.21.5+ds-2_arm64.deb ... 131s Unpacking libblosc1:arm64 (1.21.5+ds-2) ... 131s Selecting previously unselected package libpixman-1-0:arm64. 131s Preparing to unpack .../028-libpixman-1-0_0.46.4-1_arm64.deb ... 131s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 131s Selecting previously unselected package libxcb-render0:arm64. 131s Preparing to unpack .../029-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 131s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 131s Selecting previously unselected package libxcb-shm0:arm64. 131s Preparing to unpack .../030-libxcb-shm0_1.17.0-2ubuntu1_arm64.deb ... 131s Unpacking libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 131s Selecting previously unselected package libxrender1:arm64. 131s Preparing to unpack .../031-libxrender1_1%3a0.9.12-1_arm64.deb ... 131s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 131s Selecting previously unselected package libcairo2:arm64. 131s Preparing to unpack .../032-libcairo2_1.18.4-3_arm64.deb ... 131s Unpacking libcairo2:arm64 (1.18.4-3) ... 131s Selecting previously unselected package libcfitsio10t64:arm64. 131s Preparing to unpack .../033-libcfitsio10t64_4.6.3-1_arm64.deb ... 131s Unpacking libcfitsio10t64:arm64 (4.6.3-1) ... 132s Selecting previously unselected package libdatrie1:arm64. 132s Preparing to unpack .../034-libdatrie1_0.2.14-1_arm64.deb ... 132s Unpacking libdatrie1:arm64 (0.2.14-1) ... 132s Selecting previously unselected package libde265-0:arm64. 132s Preparing to unpack .../035-libde265-0_1.0.16-1build1_arm64.deb ... 132s Unpacking libde265-0:arm64 (1.0.16-1build1) ... 132s Selecting previously unselected package libdeflate0:arm64. 132s Preparing to unpack .../036-libdeflate0_1.23-2_arm64.deb ... 132s Unpacking libdeflate0:arm64 (1.23-2) ... 132s Selecting previously unselected package libfyba0t64:arm64. 132s Preparing to unpack .../037-libfyba0t64_4.1.1-11build2_arm64.deb ... 132s Unpacking libfyba0t64:arm64 (4.1.1-11build2) ... 132s Selecting previously unselected package libminizip1t64:arm64. 132s Preparing to unpack .../038-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 132s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 132s Selecting previously unselected package libfreexl1:arm64. 132s Preparing to unpack .../039-libfreexl1_2.0.0-1build3_arm64.deb ... 132s Unpacking libfreexl1:arm64 (2.0.0-1build3) ... 132s Selecting previously unselected package libgeos3.14.1:arm64. 132s Preparing to unpack .../040-libgeos3.14.1_3.14.1-2_arm64.deb ... 132s Unpacking libgeos3.14.1:arm64 (3.14.1-2) ... 132s Selecting previously unselected package libgeos-c1t64:arm64. 132s Preparing to unpack .../041-libgeos-c1t64_3.14.1-2_arm64.deb ... 132s Unpacking libgeos-c1t64:arm64 (3.14.1-2) ... 132s Selecting previously unselected package proj-data. 132s Preparing to unpack .../042-proj-data_9.7.1-1_all.deb ... 132s Unpacking proj-data (9.7.1-1) ... 132s Selecting previously unselected package libjbig0:arm64. 132s Preparing to unpack .../043-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 132s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 132s Selecting previously unselected package liblerc4:arm64. 132s Preparing to unpack .../044-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 132s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 132s Selecting previously unselected package libsharpyuv0:arm64. 132s Preparing to unpack .../045-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 132s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 132s Selecting previously unselected package libwebp7:arm64. 132s Preparing to unpack .../046-libwebp7_1.5.0-0.1build1_arm64.deb ... 132s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 132s Selecting previously unselected package libtiff6:arm64. 132s Preparing to unpack .../047-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 132s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 132s Selecting previously unselected package libproj25:arm64. 132s Preparing to unpack .../048-libproj25_9.7.1-1_arm64.deb ... 132s Unpacking libproj25:arm64 (9.7.1-1) ... 132s Selecting previously unselected package libgeotiff5:arm64. 132s Preparing to unpack .../049-libgeotiff5_1.7.4-1_arm64.deb ... 132s Unpacking libgeotiff5:arm64 (1.7.4-1) ... 132s Selecting previously unselected package libgif7:arm64. 132s Preparing to unpack .../050-libgif7_5.2.2-1ubuntu3_arm64.deb ... 132s Unpacking libgif7:arm64 (5.2.2-1ubuntu3) ... 132s Selecting previously unselected package libsz2:arm64. 132s Preparing to unpack .../051-libsz2_1.1.5-1_arm64.deb ... 132s Unpacking libsz2:arm64 (1.1.5-1) ... 132s Selecting previously unselected package libhdf4-0:arm64. 132s Preparing to unpack .../052-libhdf4-0_4.3.1-2_arm64.deb ... 132s Unpacking libhdf4-0:arm64 (4.3.1-2) ... 132s Selecting previously unselected package libhdf5-310:arm64. 132s Preparing to unpack .../053-libhdf5-310_1.14.6+repack-2_arm64.deb ... 132s Unpacking libhdf5-310:arm64 (1.14.6+repack-2) ... 132s Selecting previously unselected package libheif-plugin-aomdec:arm64. 133s Preparing to unpack .../054-libheif-plugin-aomdec_1.21.2-1_arm64.deb ... 133s Unpacking libheif-plugin-aomdec:arm64 (1.21.2-1) ... 133s Selecting previously unselected package libheif-plugin-libde265:arm64. 133s Preparing to unpack .../055-libheif-plugin-libde265_1.21.2-1_arm64.deb ... 133s Unpacking libheif-plugin-libde265:arm64 (1.21.2-1) ... 133s Selecting previously unselected package libheif1:arm64. 133s Preparing to unpack .../056-libheif1_1.21.2-1_arm64.deb ... 133s Unpacking libheif1:arm64 (1.21.2-1) ... 133s Selecting previously unselected package libhwy1t64:arm64. 133s Preparing to unpack .../057-libhwy1t64_1.3.0-2_arm64.deb ... 133s Unpacking libhwy1t64:arm64 (1.3.0-2) ... 133s Selecting previously unselected package liblcms2-2:arm64. 133s Preparing to unpack .../058-liblcms2-2_2.17-1_arm64.deb ... 133s Unpacking liblcms2-2:arm64 (2.17-1) ... 133s Selecting previously unselected package libjxl0.11:arm64. 133s Preparing to unpack .../059-libjxl0.11_0.11.1-6ubuntu1_arm64.deb ... 133s Unpacking libjxl0.11:arm64 (0.11.1-6ubuntu1) ... 133s Selecting previously unselected package liburiparser1:arm64. 133s Preparing to unpack .../060-liburiparser1_0.9.8+dfsg-2_arm64.deb ... 133s Unpacking liburiparser1:arm64 (0.9.8+dfsg-2) ... 133s Selecting previously unselected package libkmlbase1t64:arm64. 133s Preparing to unpack .../061-libkmlbase1t64_1.3.0-13_arm64.deb ... 133s Unpacking libkmlbase1t64:arm64 (1.3.0-13) ... 133s Selecting previously unselected package libkmldom1t64:arm64. 133s Preparing to unpack .../062-libkmldom1t64_1.3.0-13_arm64.deb ... 133s Unpacking libkmldom1t64:arm64 (1.3.0-13) ... 133s Selecting previously unselected package libkmlengine1t64:arm64. 133s Preparing to unpack .../063-libkmlengine1t64_1.3.0-13_arm64.deb ... 133s Unpacking libkmlengine1t64:arm64 (1.3.0-13) ... 133s Selecting previously unselected package libgomp1:arm64. 133s Preparing to unpack .../064-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 133s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 133s Selecting previously unselected package libmuparser2v5:arm64. 133s Preparing to unpack .../065-libmuparser2v5_2.3.4-2_arm64.deb ... 133s Unpacking libmuparser2v5:arm64 (2.3.4-2) ... 133s Selecting previously unselected package mysql-common. 133s Preparing to unpack .../066-mysql-common_5.8+1.1.1ubuntu2_all.deb ... 133s Unpacking mysql-common (5.8+1.1.1ubuntu2) ... 133s Selecting previously unselected package libmysqlclient24:arm64. 133s Preparing to unpack .../067-libmysqlclient24_8.4.8-0ubuntu1_arm64.deb ... 133s Unpacking libmysqlclient24:arm64 (8.4.8-0ubuntu1) ... 133s Selecting previously unselected package libhdf5-hl-310:arm64. 133s Preparing to unpack .../068-libhdf5-hl-310_1.14.6+repack-2_arm64.deb ... 133s Unpacking libhdf5-hl-310:arm64 (1.14.6+repack-2) ... 133s Selecting previously unselected package libnetcdf22:arm64. 133s Preparing to unpack .../069-libnetcdf22_1%3a4.9.3-1build1_arm64.deb ... 133s Unpacking libnetcdf22:arm64 (1:4.9.3-1build1) ... 133s Selecting previously unselected package libltdl7:arm64. 133s Preparing to unpack .../070-libltdl7_2.5.4-9_arm64.deb ... 133s Unpacking libltdl7:arm64 (2.5.4-9) ... 133s Selecting previously unselected package libodbc2:arm64. 133s Preparing to unpack .../071-libodbc2_2.3.14-1_arm64.deb ... 133s Unpacking libodbc2:arm64 (2.3.14-1) ... 133s Selecting previously unselected package unixodbc-common. 133s Preparing to unpack .../072-unixodbc-common_2.3.14-1_all.deb ... 133s Unpacking unixodbc-common (2.3.14-1) ... 133s Selecting previously unselected package libodbcinst2:arm64. 133s Preparing to unpack .../073-libodbcinst2_2.3.14-1_arm64.deb ... 133s Unpacking libodbcinst2:arm64 (2.3.14-1) ... 133s Selecting previously unselected package libopenjp2-7:arm64. 133s Preparing to unpack .../074-libopenjp2-7_2.5.4-1_arm64.deb ... 133s Unpacking libopenjp2-7:arm64 (2.5.4-1) ... 133s Selecting previously unselected package libgpgmepp6t64:arm64. 133s Preparing to unpack .../075-libgpgmepp6t64_1.24.2-3ubuntu2_arm64.deb ... 133s Unpacking libgpgmepp6t64:arm64 (1.24.2-3ubuntu2) ... 133s Selecting previously unselected package libpoppler147:arm64. 133s Preparing to unpack .../076-libpoppler147_25.03.0-11.1_arm64.deb ... 133s Unpacking libpoppler147:arm64 (25.03.0-11.1) ... 134s Selecting previously unselected package libpq5:arm64. 134s Preparing to unpack .../077-libpq5_18.1-2_arm64.deb ... 134s Unpacking libpq5:arm64 (18.1-2) ... 134s Selecting previously unselected package libqhull-r8.0:arm64. 134s Preparing to unpack .../078-libqhull-r8.0_2020.2-8_arm64.deb ... 134s Unpacking libqhull-r8.0:arm64 (2020.2-8) ... 134s Selecting previously unselected package librttopo1:arm64. 134s Preparing to unpack .../079-librttopo1_1.1.0-4_arm64.deb ... 134s Unpacking librttopo1:arm64 (1.1.0-4) ... 134s Selecting previously unselected package libspatialite8t64:arm64. 134s Preparing to unpack .../080-libspatialite8t64_5.1.0-3ubuntu1_arm64.deb ... 134s Unpacking libspatialite8t64:arm64 (5.1.0-3ubuntu1) ... 134s Selecting previously unselected package libxerces-c3.2t64:arm64. 134s Preparing to unpack .../081-libxerces-c3.2t64_3.2.4+debian-1.3build2_arm64.deb ... 134s Unpacking libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build2) ... 134s Selecting previously unselected package libgdal38:arm64. 134s Preparing to unpack .../082-libgdal38_3.12.1+dfsg-1_arm64.deb ... 134s Unpacking libgdal38:arm64 (3.12.1+dfsg-1) ... 134s Selecting previously unselected package libgraphite2-3:arm64. 134s Preparing to unpack .../083-libgraphite2-3_1.3.14-11ubuntu1_arm64.deb ... 134s Unpacking libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 134s Selecting previously unselected package libharfbuzz0b:arm64. 134s Preparing to unpack .../084-libharfbuzz0b_12.3.1-1_arm64.deb ... 134s Unpacking libharfbuzz0b:arm64 (12.3.1-1) ... 134s Selecting previously unselected package x11-common. 134s Preparing to unpack .../085-x11-common_1%3a7.7+24ubuntu1_all.deb ... 134s Unpacking x11-common (1:7.7+24ubuntu1) ... 134s Selecting previously unselected package libice6:arm64. 134s Preparing to unpack .../086-libice6_2%3a1.1.1-1build1_arm64.deb ... 134s Unpacking libice6:arm64 (2:1.1.1-1build1) ... 134s Selecting previously unselected package libjs-bootstrap. 134s Preparing to unpack .../087-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 134s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 134s Selecting previously unselected package libjs-popper.js. 134s Preparing to unpack .../088-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 134s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 134s Selecting previously unselected package libjs-bootstrap4. 134s Preparing to unpack .../089-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 134s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 134s Selecting previously unselected package libjs-d3. 134s Preparing to unpack .../090-libjs-d3_3.5.17-4build1_all.deb ... 134s Unpacking libjs-d3 (3.5.17-4build1) ... 134s Selecting previously unselected package libjs-es5-shim. 134s Preparing to unpack .../091-libjs-es5-shim_4.6.7-2_all.deb ... 134s Unpacking libjs-es5-shim 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libjs-microplugin.js (0.0.3+dfsg-2) ... 135s Selecting previously unselected package libjs-jquery-selectize.js. 135s Preparing to unpack .../097-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 135s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 135s Selecting previously unselected package libjs-jquery-ui. 135s Preparing to unpack .../098-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 135s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 135s Selecting previously unselected package libjs-json. 135s Preparing to unpack .../099-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 135s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 135s Selecting previously unselected package libjs-prettify. 135s Preparing to unpack .../100-libjs-prettify_2015.12.04+dfsg-2_all.deb ... 135s Unpacking libjs-prettify (2015.12.04+dfsg-2) ... 135s Selecting previously unselected package liblua5.4-0:arm64. 135s Preparing to unpack .../101-liblua5.4-0_5.4.8-1_arm64.deb ... 135s Unpacking liblua5.4-0:arm64 (5.4.8-1) ... 135s Selecting previously unselected package libthai-data. 135s Preparing to unpack .../102-libthai-data_0.1.30-1_all.deb ... 135s Unpacking libthai-data (0.1.30-1) ... 135s Selecting previously unselected package libthai0:arm64. 135s Preparing to unpack .../103-libthai0_0.1.30-1_arm64.deb ... 135s Unpacking libthai0:arm64 (0.1.30-1) ... 135s Selecting previously unselected package libpango-1.0-0:arm64. 135s Preparing to unpack .../104-libpango-1.0-0_1.57.0-1_arm64.deb ... 135s Unpacking libpango-1.0-0:arm64 (1.57.0-1) ... 135s Selecting previously unselected package libpangoft2-1.0-0:arm64. 135s Preparing to unpack .../105-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 135s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 135s Selecting previously unselected package libpangocairo-1.0-0:arm64. 135s Preparing to unpack .../106-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 135s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 135s Selecting previously unselected package libpaper2:arm64. 135s Preparing to unpack .../107-libpaper2_2.2.5-0.3build1_arm64.deb ... 135s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 135s Selecting previously unselected package libpaper-utils. 135s Preparing to unpack .../108-libpaper-utils_2.2.5-0.3build1_arm64.deb ... 135s Unpacking libpaper-utils (2.2.5-0.3build1) ... 135s Selecting previously unselected package libsm6:arm64. 135s Preparing to unpack .../109-libsm6_2%3a1.2.6-1_arm64.deb ... 135s Unpacking libsm6:arm64 (2:1.2.6-1) ... 135s Selecting previously unselected package libtcl8.6:arm64. 135s Preparing to unpack .../110-libtcl8.6_8.6.17+dfsg-1_arm64.deb ... 135s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1) ... 135s Selecting previously unselected package libxft2:arm64. 135s Preparing to unpack .../111-libxft2_2.3.6-1build2_arm64.deb ... 135s Unpacking libxft2:arm64 (2.3.6-1build2) ... 135s Selecting previously unselected package libxss1:arm64. 135s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build4_arm64.deb ... 135s Unpacking libxss1:arm64 (1:1.2.3-1build4) ... 135s Selecting previously unselected package libtk8.6:arm64. 135s Preparing to unpack .../113-libtk8.6_8.6.17-1_arm64.deb ... 135s Unpacking libtk8.6:arm64 (8.6.17-1) ... 135s Selecting previously unselected package libudunits2-data. 136s Preparing to unpack .../114-libudunits2-data_2.2.28-8_all.deb ... 136s Unpacking libudunits2-data (2.2.28-8) ... 136s Selecting previously unselected package libudunits2-0:arm64. 136s Preparing to unpack .../115-libudunits2-0_2.2.28-8_arm64.deb ... 136s Unpacking libudunits2-0:arm64 (2.2.28-8) ... 136s Selecting previously unselected package libxt6t64:arm64. 136s Preparing to unpack .../116-libxt6t64_1%3a1.2.1-1.3_arm64.deb ... 136s Unpacking libxt6t64:arm64 (1:1.2.1-1.3) ... 136s Selecting previously unselected package node-bootstrap-sass. 136s Preparing to unpack .../117-node-bootstrap-sass_3.4.3-2_all.deb ... 136s Unpacking node-bootstrap-sass (3.4.3-2) ... 136s Selecting previously unselected package node-html5shiv. 136s Preparing to unpack .../118-node-html5shiv_3.7.3+dfsg-5_all.deb ... 136s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 136s Selecting previously unselected package node-normalize.css. 136s Preparing to unpack .../119-node-normalize.css_8.0.1-5.1_all.deb ... 136s Unpacking node-normalize.css (8.0.1-5.1) ... 136s Selecting previously unselected package pandoc-data. 136s Preparing to unpack .../120-pandoc-data_3.1.11.1-3build1_all.deb ... 136s Unpacking pandoc-data (3.1.11.1-3build1) ... 136s Selecting previously unselected package pandoc. 136s Preparing to unpack .../121-pandoc_3.1.11.1+ds-4_arm64.deb ... 136s Unpacking pandoc (3.1.11.1+ds-4) ... 137s Selecting previously unselected package zip. 137s Preparing to unpack .../122-zip_3.0-15ubuntu2_arm64.deb ... 137s Unpacking zip (3.0-15ubuntu2) ... 137s Selecting previously unselected package unzip. 137s Preparing to unpack .../123-unzip_6.0-29ubuntu1_arm64.deb ... 137s Unpacking unzip (6.0-29ubuntu1) ... 137s Selecting previously unselected package xdg-utils. 137s Preparing to unpack .../124-xdg-utils_1.2.1-2ubuntu2_all.deb ... 137s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 137s Selecting previously unselected package r-base-core. 137s Preparing to unpack .../125-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 137s Unpacking r-base-core (4.5.2-1ubuntu2) ... 137s Selecting previously unselected package r-cran-abind. 137s Preparing to unpack .../126-r-cran-abind_1.4-8-1build1_all.deb ... 137s Unpacking r-cran-abind (1.4-8-1build1) ... 137s Selecting previously unselected package r-cran-cli. 137s Preparing to unpack .../127-r-cran-cli_3.6.4-1_arm64.deb ... 137s Unpacking r-cran-cli (3.6.4-1) ... 137s Selecting previously unselected package r-cran-generics. 137s Preparing to unpack .../128-r-cran-generics_0.1.4-1_all.deb ... 137s Unpacking r-cran-generics (0.1.4-1) ... 137s Selecting previously unselected package r-cran-glue. 137s Preparing to unpack .../129-r-cran-glue_1.8.0-1_arm64.deb ... 137s Unpacking r-cran-glue (1.8.0-1) ... 137s Selecting previously unselected package r-cran-rlang. 137s Preparing to unpack .../130-r-cran-rlang_1.1.5-3_arm64.deb ... 137s Unpacking r-cran-rlang (1.1.5-3) ... 137s Selecting previously unselected package r-cran-lifecycle. 137s Preparing to unpack .../131-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 137s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 137s Selecting previously unselected package r-cran-magrittr. 138s Preparing to unpack .../132-r-cran-magrittr_2.0.3-1_arm64.deb ... 138s Unpacking r-cran-magrittr (2.0.3-1) ... 138s Selecting previously unselected package r-cran-utf8. 138s Preparing to unpack .../133-r-cran-utf8_1.2.4-1_arm64.deb ... 138s Unpacking r-cran-utf8 (1.2.4-1) ... 138s Selecting previously unselected package r-cran-vctrs. 138s Preparing to unpack .../134-r-cran-vctrs_0.6.5-1_arm64.deb ... 138s Unpacking r-cran-vctrs (0.6.5-1) ... 138s Selecting previously unselected package r-cran-pillar. 138s Preparing to unpack .../135-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 138s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 138s Selecting previously unselected package r-cran-r6. 138s Preparing to unpack .../136-r-cran-r6_2.6.1-1_all.deb ... 138s Unpacking r-cran-r6 (2.6.1-1) ... 138s Selecting previously unselected package r-cran-fansi. 138s Preparing to unpack .../137-r-cran-fansi_1.0.6-2_arm64.deb ... 138s Unpacking r-cran-fansi (1.0.6-2) ... 138s Selecting previously unselected package r-cran-pkgconfig. 138s Preparing to unpack .../138-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 138s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 138s Selecting previously unselected package r-cran-tibble. 138s Preparing to unpack .../139-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 138s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 138s Selecting previously unselected package r-cran-withr. 138s Preparing to unpack .../140-r-cran-withr_3.0.2+dfsg-1_all.deb ... 138s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 138s Selecting previously unselected package r-cran-tidyselect. 138s Preparing to unpack .../141-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 138s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 138s Selecting previously unselected package r-cran-dplyr. 138s Preparing to unpack .../142-r-cran-dplyr_1.1.4-4_arm64.deb ... 138s Unpacking r-cran-dplyr (1.1.4-4) ... 138s Selecting previously unselected package r-cran-purrr. 138s Preparing to unpack .../143-r-cran-purrr_1.0.4-1_arm64.deb ... 138s Unpacking r-cran-purrr (1.0.4-1) ... 138s Selecting previously unselected package r-cran-mass. 138s Preparing to unpack .../144-r-cran-mass_7.3-65-1_arm64.deb ... 138s Unpacking r-cran-mass (7.3-65-1) ... 138s Selecting previously unselected package r-cran-class. 138s Preparing to unpack .../145-r-cran-class_7.3-23-1_arm64.deb ... 138s Unpacking r-cran-class (7.3-23-1) ... 138s Selecting previously unselected package r-cran-proxy. 138s Preparing to unpack .../146-r-cran-proxy_0.4-27-1_arm64.deb ... 138s Unpacking r-cran-proxy (0.4-27-1) ... 138s Selecting previously unselected package r-cran-e1071. 138s Preparing to unpack .../147-r-cran-e1071_1.7-17-1_arm64.deb ... 138s Unpacking r-cran-e1071 (1.7-17-1) ... 138s Selecting previously unselected package r-cran-kernsmooth. 138s Preparing to unpack .../148-r-cran-kernsmooth_2.23-26-1build1_arm64.deb ... 138s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 138s Selecting previously unselected package r-cran-classint. 138s Preparing to unpack .../149-r-cran-classint_0.4-11+dfsg-1_arm64.deb ... 138s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 138s Selecting previously unselected package r-cran-dbi. 138s Preparing to unpack .../150-r-cran-dbi_1.2.3-1build1_all.deb ... 138s Unpacking r-cran-dbi (1.2.3-1build1) ... 138s Selecting previously unselected package r-cran-littler. 138s Preparing to unpack .../151-r-cran-littler_0.3.21-2_arm64.deb ... 138s Unpacking r-cran-littler (0.3.21-2) ... 138s Selecting previously unselected package r-cran-pkgkitten. 139s Preparing to unpack .../152-r-cran-pkgkitten_0.2.4-1_all.deb ... 139s Unpacking r-cran-pkgkitten (0.2.4-1) ... 139s Selecting previously unselected package r-cran-rcpp. 139s Preparing to unpack .../153-r-cran-rcpp_1.1.0-1_arm64.deb ... 139s Unpacking r-cran-rcpp (1.1.0-1) ... 139s Selecting previously unselected package r-cran-wk. 139s Preparing to unpack .../154-r-cran-wk_0.9.4-1_arm64.deb ... 139s Unpacking r-cran-wk (0.9.4-1) ... 139s Selecting previously unselected package r-cran-s2. 139s Preparing to unpack .../155-r-cran-s2_1.1.9-1build1_arm64.deb ... 139s Unpacking r-cran-s2 (1.1.9-1build1) ... 139s Selecting previously unselected package r-cran-units. 139s Preparing to unpack .../156-r-cran-units_0.8-7+dfsg-2_arm64.deb ... 139s Unpacking r-cran-units (0.8-7+dfsg-2) ... 139s Selecting previously unselected package r-cran-sf. 139s Preparing to unpack .../157-r-cran-sf_1.0-19+dfsg-2build2_arm64.deb ... 139s Unpacking r-cran-sf (1.0-19+dfsg-2build2) ... 139s Selecting previously unselected package r-cran-areal. 139s Preparing to unpack .../158-r-cran-areal_0.1.8+dfsg-2_all.deb ... 139s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 139s Selecting previously unselected package r-cran-sys. 139s Preparing to unpack .../159-r-cran-sys_3.4.3-1_arm64.deb ... 139s Unpacking r-cran-sys (3.4.3-1) ... 139s Selecting previously unselected package r-cran-askpass. 139s Preparing to unpack .../160-r-cran-askpass_1.2.1-1_arm64.deb ... 139s Unpacking r-cran-askpass (1.2.1-1) ... 139s Selecting previously unselected package r-cran-base64enc. 139s Preparing to unpack .../161-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 139s Unpacking r-cran-base64enc (0.1-3-3build1) ... 139s Selecting previously unselected package r-cran-bdsmatrix. 139s Preparing to unpack .../162-r-cran-bdsmatrix_1.3-7-1_arm64.deb ... 139s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 139s Selecting previously unselected package r-cran-brio. 139s Preparing to unpack .../163-r-cran-brio_1.1.5-1_arm64.deb ... 139s Unpacking r-cran-brio (1.1.5-1) ... 139s Selecting previously unselected package r-cran-fastmap. 139s Preparing to unpack .../164-r-cran-fastmap_1.2.0-1_arm64.deb ... 139s Unpacking r-cran-fastmap (1.2.0-1) ... 139s Selecting previously unselected package r-cran-cachem. 139s Preparing to unpack .../165-r-cran-cachem_1.1.0-1_arm64.deb ... 139s Unpacking r-cran-cachem (1.1.0-1) ... 139s Selecting previously unselected package r-cran-digest. 139s Preparing to unpack .../166-r-cran-digest_0.6.39-1_arm64.deb ... 139s Unpacking r-cran-digest (0.6.39-1) ... 139s Selecting previously unselected package r-cran-htmltools. 139s Preparing to unpack .../167-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 139s Unpacking r-cran-htmltools (0.5.8.1-1) ... 139s Selecting previously unselected package r-cran-jquerylib. 139s Preparing to unpack .../168-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 139s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 139s Selecting previously unselected package r-cran-jsonlite. 139s Preparing to unpack .../169-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 139s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 139s Selecting previously unselected package r-cran-memoise. 139s Preparing to unpack .../170-r-cran-memoise_2.0.1-1build1_all.deb ... 139s Unpacking r-cran-memoise (2.0.1-1build1) ... 139s Selecting previously unselected package r-cran-mime. 140s Preparing to unpack .../171-r-cran-mime_0.12-2_arm64.deb ... 140s Unpacking r-cran-mime (0.12-2) ... 140s Selecting previously unselected package r-cran-fs. 140s Preparing to unpack .../172-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 140s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 140s Selecting previously unselected package r-cran-rappdirs. 140s Preparing to unpack .../173-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 140s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 140s Selecting previously unselected package r-cran-sass. 140s Preparing to unpack .../174-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 140s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 140s Selecting previously unselected package r-cran-bslib. 140s Preparing to unpack .../175-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 140s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 140s Selecting previously unselected package r-cran-cairo. 140s Preparing to unpack .../176-r-cran-cairo_1.6-2-1_arm64.deb ... 140s Unpacking r-cran-cairo (1.6-2-1) ... 140s Selecting previously unselected package r-cran-ps. 140s Preparing to unpack .../177-r-cran-ps_1.9.0-1_arm64.deb ... 140s Unpacking r-cran-ps (1.9.0-1) ... 140s Selecting previously unselected package r-cran-processx. 140s Preparing to unpack .../178-r-cran-processx_3.8.6-1_arm64.deb ... 140s Unpacking r-cran-processx (3.8.6-1) ... 140s Selecting previously unselected package r-cran-callr. 140s Preparing to unpack .../179-r-cran-callr_3.7.6-1_all.deb ... 140s Unpacking r-cran-callr (3.7.6-1) ... 140s Selecting previously unselected package r-cran-cftime. 140s Preparing to unpack .../180-r-cran-cftime_1.7.2-1_all.deb ... 140s Unpacking r-cran-cftime (1.7.2-1) ... 140s Selecting previously unselected package r-cran-cluster. 140s Preparing to unpack .../181-r-cran-cluster_2.1.8.1-1_arm64.deb ... 140s Unpacking r-cran-cluster (2.1.8.1-1) ... 140s Selecting previously unselected package r-cran-clue. 140s Preparing to unpack .../182-r-cran-clue_0.3-66-1_arm64.deb ... 140s Unpacking r-cran-clue (0.3-66-1) ... 140s Selecting previously unselected package r-cran-codetools. 140s Preparing to unpack .../183-r-cran-codetools_0.2-20-1build1_all.deb ... 140s Unpacking r-cran-codetools (0.2-20-1build1) ... 140s Selecting previously unselected package r-cran-collapse. 140s Preparing to unpack .../184-r-cran-collapse_2.1.0-1_arm64.deb ... 140s Unpacking r-cran-collapse (2.1.0-1) ... 140s Selecting previously unselected package r-cran-commonmark. 140s Preparing to unpack .../185-r-cran-commonmark_1.9.5-1_arm64.deb ... 140s Unpacking r-cran-commonmark (1.9.5-1) ... 140s Selecting previously unselected package r-cran-lazyeval. 140s Preparing to unpack .../186-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 140s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 140s Selecting previously unselected package r-cran-rex. 140s Preparing to unpack .../187-r-cran-rex_1.2.1-1build1_all.deb ... 140s Unpacking r-cran-rex (1.2.1-1build1) ... 140s Selecting previously unselected package r-cran-curl. 140s Preparing to unpack .../188-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 140s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 140s Selecting previously unselected package r-cran-openssl. 141s Preparing to unpack .../189-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 141s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 141s Selecting previously unselected package r-cran-httr. 141s Preparing to unpack .../190-r-cran-httr_1.4.7+dfsg-1_all.deb ... 141s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 141s Selecting previously unselected package r-cran-crayon. 141s Preparing to unpack .../191-r-cran-crayon_1.5.3-1_all.deb ... 141s Unpacking r-cran-crayon (1.5.3-1) ... 141s Selecting previously unselected package r-cran-yaml. 141s Preparing to unpack .../192-r-cran-yaml_2.3.10-1_arm64.deb ... 141s Unpacking r-cran-yaml (2.3.10-1) ... 141s Selecting previously unselected package r-cran-covr. 141s Preparing to unpack .../193-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 141s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 141s Selecting previously unselected package r-cran-cpp11. 141s Preparing to unpack .../194-r-cran-cpp11_0.5.3-1_all.deb ... 141s Unpacking r-cran-cpp11 (0.5.3-1) ... 141s Selecting previously unselected package r-cran-cubelyr. 141s Preparing to unpack .../195-r-cran-cubelyr_1.0.2-1_all.deb ... 141s Unpacking r-cran-cubelyr (1.0.2-1) ... 141s Selecting previously unselected package r-cran-deldir. 141s Preparing to unpack .../196-r-cran-deldir_2.0-4-1build1_arm64.deb ... 141s Unpacking r-cran-deldir (2.0-4-1build1) ... 141s Selecting previously unselected package r-cran-desc. 141s Preparing to unpack .../197-r-cran-desc_1.4.3-1_all.deb ... 141s Unpacking r-cran-desc (1.4.3-1) ... 141s Selecting previously unselected package r-cran-diffobj. 141s Preparing to unpack .../198-r-cran-diffobj_0.3.5-1build1_arm64.deb ... 141s Unpacking r-cran-diffobj (0.3.5-1build1) ... 141s Selecting previously unselected package r-cran-evaluate. 141s Preparing to unpack .../199-r-cran-evaluate_1.0.3-1_all.deb ... 141s Unpacking r-cran-evaluate (1.0.3-1) ... 141s Selecting previously unselected package r-cran-lattice. 141s Preparing to unpack .../200-r-cran-lattice_0.22-7-1_arm64.deb ... 141s Unpacking r-cran-lattice (0.22-7-1) ... 141s Selecting previously unselected package r-cran-sp. 141s Preparing to unpack .../201-r-cran-sp_1%3a2.2-0+dfsg-1_arm64.deb ... 141s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 141s Selecting previously unselected package r-cran-terra. 141s Preparing to unpack .../202-r-cran-terra_1.8-70-1build2_arm64.deb ... 141s Unpacking r-cran-terra (1.8-70-1build2) ... 141s Selecting previously unselected package r-cran-raster. 141s Preparing to unpack .../203-r-cran-raster_3.6-31-2_arm64.deb ... 141s Unpacking r-cran-raster (3.6-31-2) ... 141s Selecting previously unselected package r-cran-exactextractr. 141s Preparing to unpack .../204-r-cran-exactextractr_0.10.0-1build2_arm64.deb ... 141s Unpacking r-cran-exactextractr (0.10.0-1build2) ... 141s Selecting previously unselected package r-cran-farver. 141s Preparing to unpack .../205-r-cran-farver_2.1.2-1_arm64.deb ... 141s Unpacking r-cran-farver (2.1.2-1) ... 141s Selecting previously unselected package r-cran-fnn. 141s Preparing to unpack .../206-r-cran-fnn_1.1.4.1-1_arm64.deb ... 141s Unpacking r-cran-fnn (1.1.4.1-1) ... 141s Selecting previously unselected package r-cran-fontawesome. 141s Preparing to unpack .../207-r-cran-fontawesome_0.5.3-1_all.deb ... 141s Unpacking r-cran-fontawesome (0.5.3-1) ... 142s Selecting previously unselected package r-cran-formula. 142s Preparing to unpack .../208-r-cran-formula_1.2-5-1_all.deb ... 142s Unpacking r-cran-formula (1.2-5-1) ... 142s Selecting previously unselected package r-cran-globals. 142s Preparing to unpack .../209-r-cran-globals_0.18.0-1_all.deb ... 142s Unpacking r-cran-globals (0.18.0-1) ... 142s Selecting previously unselected package r-cran-listenv. 142s Preparing to unpack .../210-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 142s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 142s Selecting previously unselected package r-cran-parallelly. 142s Preparing to unpack .../211-r-cran-parallelly_1.42.0-1_arm64.deb ... 142s Unpacking r-cran-parallelly (1.42.0-1) ... 142s Selecting previously unselected package r-cran-future. 142s Preparing to unpack .../212-r-cran-future_1.34.0+dfsg-1_all.deb ... 142s Unpacking r-cran-future (1.34.0+dfsg-1) ... 142s Selecting previously unselected package r-cran-future.apply. 142s Preparing to unpack .../213-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 142s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 142s Selecting previously unselected package r-cran-gtable. 142s Preparing to unpack .../214-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 142s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 142s Selecting previously unselected package r-cran-isoband. 142s Preparing to unpack .../215-r-cran-isoband_0.2.7-1_arm64.deb ... 142s Unpacking r-cran-isoband (0.2.7-1) ... 142s Selecting previously unselected package r-cran-nlme. 142s Preparing to unpack .../216-r-cran-nlme_3.1.168-1_arm64.deb ... 142s Unpacking r-cran-nlme (3.1.168-1) ... 142s Selecting previously unselected package r-cran-matrix. 142s Preparing to unpack .../217-r-cran-matrix_1.7-4-1_arm64.deb ... 142s Unpacking r-cran-matrix (1.7-4-1) ... 142s Selecting previously unselected package r-cran-mgcv. 142s Preparing to unpack .../218-r-cran-mgcv_1.9-4-1_arm64.deb ... 142s Unpacking r-cran-mgcv (1.9-4-1) ... 142s Selecting previously unselected package r-cran-labeling. 142s Preparing to unpack .../219-r-cran-labeling_0.4.3-1_all.deb ... 142s Unpacking r-cran-labeling (0.4.3-1) ... 142s Selecting previously unselected package r-cran-rcolorbrewer. 142s Preparing to unpack .../220-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 142s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 142s Selecting previously unselected package r-cran-viridislite. 142s Preparing to unpack .../221-r-cran-viridislite_0.4.2-2_all.deb ... 142s Unpacking r-cran-viridislite (0.4.2-2) ... 142s Selecting previously unselected package r-cran-scales. 142s Preparing to unpack .../222-r-cran-scales_1.4.0-1_all.deb ... 142s Unpacking r-cran-scales (1.4.0-1) ... 142s Selecting previously unselected package r-cran-ggplot2. 142s Preparing to unpack .../223-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 142s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 143s Selecting previously unselected package r-cran-tweenr. 143s Preparing to unpack .../224-r-cran-tweenr_2.0.3-1_arm64.deb ... 143s Unpacking r-cran-tweenr (2.0.3-1) ... 143s Selecting previously unselected package r-cran-polyclip. 143s Preparing to unpack .../225-r-cran-polyclip_1.10-7-1_arm64.deb ... 143s Unpacking r-cran-polyclip (1.10-7-1) ... 143s Selecting previously unselected package r-cran-systemfonts. 143s Preparing to unpack .../226-r-cran-systemfonts_1.2.1-1_arm64.deb ... 143s Unpacking r-cran-systemfonts (1.2.1-1) ... 143s Selecting previously unselected package r-cran-rcppeigen. 143s Preparing to unpack .../227-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 143s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 143s Selecting previously unselected package r-cran-ggforce. 143s Preparing to unpack .../228-r-cran-ggforce_0.4.2-1_arm64.deb ... 143s Unpacking r-cran-ggforce (0.4.2-1) ... 143s Selecting previously unselected package r-cran-stringi. 143s Preparing to unpack .../229-r-cran-stringi_1.8.4-1build2_arm64.deb ... 143s Unpacking r-cran-stringi (1.8.4-1build2) ... 143s Selecting previously unselected package r-cran-stringr. 143s Preparing to unpack .../230-r-cran-stringr_1.5.1-1_all.deb ... 143s Unpacking r-cran-stringr (1.5.1-1) ... 143s Selecting previously unselected package r-cran-ggthemes. 143s Preparing to unpack .../231-r-cran-ggthemes_5.2.0-1_all.deb ... 143s Unpacking r-cran-ggthemes (5.2.0-1) ... 143s Selecting previously unselected package r-cran-goftest. 143s Preparing to unpack .../232-r-cran-goftest_1.2-3-1build1_arm64.deb ... 143s Unpacking r-cran-goftest (1.2-3-1build1) ... 143s Selecting previously unselected package r-cran-gridextra. 143s Preparing to unpack .../233-r-cran-gridextra_2.3-3build2_all.deb ... 143s Unpacking r-cran-gridextra (2.3-3build2) ... 143s Selecting previously unselected package r-cran-zoo. 143s Preparing to unpack .../234-r-cran-zoo_1.8-15-1_arm64.deb ... 143s Unpacking r-cran-zoo (1.8-15-1) ... 143s Selecting previously unselected package r-cran-sftime. 143s Preparing to unpack .../235-r-cran-sftime_0.2-0-6_all.deb ... 143s Unpacking r-cran-sftime (0.2-0-6) ... 143s Selecting previously unselected package r-cran-xts. 143s Preparing to unpack .../236-r-cran-xts_0.14.1-1_arm64.deb ... 143s Unpacking r-cran-xts (0.14.1-1) ... 143s Selecting previously unselected package r-cran-intervals. 143s Preparing to unpack .../237-r-cran-intervals_0.15.5-1_arm64.deb ... 143s Unpacking r-cran-intervals (0.15.5-1) ... 143s Selecting previously unselected package r-cran-spacetime. 143s Preparing to unpack .../238-r-cran-spacetime_1.3-3-2_all.deb ... 143s Unpacking r-cran-spacetime (1.3-3-2) ... 143s Selecting previously unselected package r-cran-stars. 144s Preparing to unpack .../239-r-cran-stars_0.6-8-1_all.deb ... 144s Unpacking r-cran-stars (0.6-8-1) ... 144s Selecting previously unselected package r-cran-gstat. 144s Preparing to unpack .../240-r-cran-gstat_2.1-3-2_arm64.deb ... 144s Unpacking r-cran-gstat (2.1-3-2) ... 144s Selecting previously unselected package r-cran-xfun. 144s Preparing to unpack .../241-r-cran-xfun_0.55+dfsg-1_arm64.deb ... 144s Unpacking r-cran-xfun (0.55+dfsg-1) ... 144s Selecting previously unselected package r-cran-highr. 144s Preparing to unpack .../242-r-cran-highr_0.11+dfsg-1_all.deb ... 144s Unpacking r-cran-highr (0.11+dfsg-1) ... 144s Selecting previously unselected package r-cran-later. 144s Preparing to unpack .../243-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 144s Unpacking r-cran-later (1.4.1+dfsg-1) ... 144s Selecting previously unselected package r-cran-promises. 144s Preparing to unpack .../244-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 144s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 144s Selecting previously unselected package r-cran-httpuv. 144s Preparing to unpack .../245-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 144s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 144s Selecting previously unselected package libjs-mathjax. 144s Preparing to unpack .../246-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 144s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 144s Selecting previously unselected package r-cran-knitr. 144s Preparing to unpack .../247-r-cran-knitr_1.51+dfsg-1_all.deb ... 144s Unpacking r-cran-knitr (1.51+dfsg-1) ... 144s Selecting previously unselected package r-cran-lmtest. 144s Preparing to unpack .../248-r-cran-lmtest_0.9.40-1build1_arm64.deb ... 144s Unpacking r-cran-lmtest (0.9.40-1build1) ... 144s Selecting previously unselected package r-cran-lwgeom. 145s Preparing to unpack .../249-r-cran-lwgeom_0.2-14-1_arm64.deb ... 145s Unpacking r-cran-lwgeom (0.2-14-1) ... 145s Selecting previously unselected package r-cran-maps. 145s Preparing to unpack .../250-r-cran-maps_3.4.2.1-1_arm64.deb ... 145s Unpacking r-cran-maps (3.4.2.1-1) ... 145s Selecting previously unselected package r-cran-mapdata. 145s Preparing to unpack .../251-r-cran-mapdata_2.3.1-1_arm64.deb ... 145s Unpacking r-cran-mapdata (2.3.1-1) ... 145s Selecting previously unselected package r-cran-misctools. 145s Preparing to unpack .../252-r-cran-misctools_0.6-28-1_all.deb ... 145s Unpacking r-cran-misctools (0.6-28-1) ... 145s Selecting previously unselected package r-cran-sandwich. 145s Preparing to unpack .../253-r-cran-sandwich_3.1-1-1_all.deb ... 145s Unpacking r-cran-sandwich (3.1-1-1) ... 145s Selecting previously unselected package r-cran-maxlik. 145s Preparing to unpack .../254-r-cran-maxlik_1.5-2.2-1_all.deb ... 145s Unpacking r-cran-maxlik (1.5-2.2-1) ... 145s Selecting previously unselected package r-cran-rnetcdf. 145s Preparing to unpack .../255-r-cran-rnetcdf_2.11-1-1_arm64.deb ... 145s Unpacking r-cran-rnetcdf (2.11-1-1) ... 145s Selecting previously unselected package r-cran-tidyr. 145s Preparing to unpack .../256-r-cran-tidyr_1.3.1-1_arm64.deb ... 145s Unpacking r-cran-tidyr (1.3.1-1) ... 145s Selecting previously unselected package r-cran-ncmeta. 145s Preparing to unpack .../257-r-cran-ncmeta_0.4.0-1_all.deb ... 145s Unpacking r-cran-ncmeta (0.4.0-1) ... 145s Selecting previously unselected package r-cran-ncdfgeom. 145s Preparing to unpack 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unselected package r-cran-rbibutils. 146s Preparing to unpack .../264-r-cran-rbibutils_2.3-1_arm64.deb ... 146s Unpacking r-cran-rbibutils (2.3-1) ... 146s Selecting previously unselected package r-cran-rdpack. 146s Preparing to unpack .../265-r-cran-rdpack_2.6.3-1_all.deb ... 146s Unpacking r-cran-rdpack (2.6.3-1) ... 146s Selecting previously unselected package r-cran-plm. 146s Preparing to unpack .../266-r-cran-plm_2.6-7-1_all.deb ... 146s Unpacking r-cran-plm (2.6-7-1) ... 146s Selecting previously unselected package r-cran-praise. 146s Preparing to unpack .../267-r-cran-praise_1.0.0-4build2_all.deb ... 146s Unpacking r-cran-praise (1.0.0-4build2) ... 146s Selecting previously unselected package r-cran-randomforest. 146s Preparing to unpack .../268-r-cran-randomforest_4.7-1.2-1_arm64.deb ... 146s Unpacking r-cran-randomforest (4.7-1.2-1) ... 146s Selecting previously unselected package r-cran-tinytex. 146s Preparing to unpack .../269-r-cran-tinytex_0.58-1_all.deb ... 146s Unpacking 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r-cran-sass (0.4.9+dfsg-1) ... 151s Setting up r-cran-globals (0.18.0-1) ... 151s Setting up r-cran-vctrs (0.6.5-1) ... 151s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... 151s Setting up r-cran-pillar (1.11.1+dfsg-1) ... 151s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 151s Setting up r-cran-misctools (0.6-28-1) ... 151s Setting up r-cran-stringr (1.5.1-1) ... 151s Setting up r-cran-class (7.3-23-1) ... 151s Setting up r-cran-callr (3.7.6-1) ... 151s Setting up r-cran-desc (1.4.3-1) ... 151s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 151s Setting up r-cran-sandwich (3.1-1-1) ... 151s Setting up r-cran-fontawesome (0.5.3-1) ... 151s Setting up r-cran-survival (3.8-6-1) ... 151s Setting up r-cran-xts (0.14.1-1) ... 151s Setting up r-cran-rdpack (2.6.3-1) ... 151s Setting up r-cran-tweenr (2.0.3-1) ... 151s Setting up r-cran-future (1.34.0+dfsg-1) ... 151s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ... 151s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 151s Setting up 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Setting up r-cran-plm (2.6-7-1) ... 151s Setting up r-cran-viridis (0.6.5-1) ... 151s Setting up r-cran-testthat (3.2.3-1) ... 151s Setting up r-cran-classint (0.4-11+dfsg-1) ... 151s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 151s Setting up r-cran-spatstat.explore (3.3-4-1) ... 151s Setting up r-cran-ggthemes (5.2.0-1) ... 151s Setting up r-cran-tidyr (1.3.1-1) ... 151s Setting up r-cran-ggforce (0.4.2-1) ... 151s Setting up r-cran-spatstat.model (3.3-4-1) ... 151s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 151s Setting up r-cran-ncmeta (0.4.0-1) ... 151s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 151s Setting up r-cran-spatstat.linnet (3.2-5-1) ... 151s Setting up r-cran-spatstat (3.3-1-1) ... 151s Setting up libheif-plugin-aomdec:arm64 (1.21.2-1) ... 151s Setting up libheif-plugin-libde265:arm64 (1.21.2-1) ... 151s Setting up libheif1:arm64 (1.21.2-1) ... 151s Setting up libgdal38:arm64 (3.12.1+dfsg-1) ... 151s Setting up r-cran-terra (1.8-70-1build2) ... 151s Setting up r-cran-sf (1.0-19+dfsg-2build2) ... 151s Setting up r-cran-stars (0.6-8-1) ... 151s Setting up r-cran-sftime (0.2-0-6) ... 151s Setting up r-cran-areal (0.1.8+dfsg-2) ... 151s Setting up r-cran-gstat (2.1-3-2) ... 151s Setting up r-cran-raster (3.6-31-2) ... 151s Setting up r-cran-lwgeom (0.2-14-1) ... 151s Setting up r-cran-exactextractr (0.10.0-1build2) ... 151s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... 151s Processing triggers for libc-bin (2.42-2ubuntu4) ... 151s Processing triggers for man-db (2.13.1-1) ... 152s Processing triggers for install-info (7.2-5) ... 153s autopkgtest [17:32:53]: test run-unit-test: [----------------------- 153s BEGIN TEST aggregate.R 153s 153s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 153s Copyright (C) 2025 The R Foundation for Statistical Computing 153s Platform: aarch64-unknown-linux-gnu 153s 153s R is free software and comes with ABSOLUTELY NO WARRANTY. 153s You are welcome to redistribute it under certain conditions. 153s Type 'license()' or 'licence()' for distribution details. 153s 153s R is a collaborative project with many contributors. 153s Type 'contributors()' for more information and 153s 'citation()' on how to cite R or R packages in publications. 153s 153s Type 'demo()' for some demos, 'help()' for on-line help, or 153s 'help.start()' for an HTML browser interface to help. 153s Type 'q()' to quit R. 153s 154s > ## IGNORE_RDIFF_BEGIN 154s > library(stars) 154s Loading required package: abind 154s Loading required package: sf 154s Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.0; sf_use_s2() is TRUE 154s > ## IGNORE_RDIFF_END 154s > 154s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 154s + data(air) # this loads several datasets in .GlobalEnv 154s + dim(air) 154s + d = st_dimensions(station = st_set_crs(st_as_sfc(stations), 4326), time = dates) 154s + 154s + blocks = st_make_grid(st_as_sfc("POLYGON ((5.871619 47.26986, 15.03811 47.26986, 15.03811 55.05653, 5.871619 55.05653, 5.871619 47.26986))", crs = 4326), 154s + n = c(3,3)) 154s + 154s + print(aq <- st_as_stars(list(PM10 = air), dimensions = d)) 154s + print(a <- aggregate(aq, blocks, mean, na.rm = TRUE)) 154s + } 155s stars object with 2 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 155s PM10 0 9.921 14.792 17.69728 21.992 274.333 157659 155s dimension(s): 155s from to offset delta refsys point 155s station 1 70 NA NA WGS 84 TRUE 155s time 1 4383 1998-01-01 1 days Date FALSE 155s values 155s station POINT (9.585911 53.67057),...,POINT (9.446661 49.24068) 155s time NULL 155s stars object with 2 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 155s PM10 1 11 15.57425 18.1715 22.17197 183.271 8429 155s dimension(s): 155s from to offset delta refsys point 155s geometry 1 9 NA NA WGS 84 FALSE 155s time 1 4383 1998-01-01 1 days Date FALSE 155s values 155s geometry POLYGON ((5.871619 47.269...,...,POLYGON ((11.98261 52.460... 155s time NULL 155s > 155s > # adapted from ?read_stars: 155s > m = array(1:720, dim = c(x = 10, y = 12, t = 6)) # named dim 155s > st = st_as_stars(m) 155s > attr(st, "dimensions")$y$delta = -1 155s > attr(st, "dimensions")$y$offset = 12 155s > tm = as.Date("2019-02-19") + 1:6 155s > st = st_set_crs(st_set_dimensions(st, 3, values = tm), 4326) 155s > 155s > tmp = tempfile(fileext = ".tif") 155s > write_stars(st, tmp) 155s > 155s > (red <- setNames(read_stars(tmp, RasterIO = list(nXOff = 1, nYOff = 1, nXsize = 10, nYSize = 12, 155s + nBufXSize = 2, nBufYSize = 2)), "foo")) 155s stars object with 3 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. 155s foo 33 199.25 365.5 365.5 531.75 698 155s dimension(s): 155s from to offset delta refsys point x/y 155s x 1 2 0 5 WGS 84 FALSE [x] 155s y 1 2 12 -6 WGS 84 FALSE [y] 155s band 1 6 NA NA NA NA 155s > 155s > sfc = st_set_crs(st_as_sfc(red, as_points = FALSE), st_crs(st)) 155s > (a = aggregate(st, st_sf(a = 1, geom = sfc), mean)) 155s stars object with 2 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. 155s A1 28 194.25 360.5 360.5 526.75 693 155s dimension(s): 155s from to offset delta refsys point 155s geom 1 4 NA NA WGS 84 FALSE 155s t 1 6 2019-02-20 1 days Date FALSE 155s values 155s geom POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 155s t NULL 155s > (a = aggregate(st, sfc, mean)) 155s stars object with 2 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. 155s A1 28 194.25 360.5 360.5 526.75 693 155s dimension(s): 155s from to offset delta refsys point 155s geometry 1 4 NA NA WGS 84 FALSE 155s t 1 6 2019-02-20 1 days Date FALSE 155s values 155s geometry POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 155s t NULL 155s > 155s > tm0 = as.Date("2019-02-19") + -1:8 155s > (a = aggregate(st, tm0, mean, na.rm = TRUE)) 155s stars object with 3 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 155s A1 1 180.75 360.5 360.5 540.25 720 480 155s dimension(s): 155s from to offset delta refsys point x/y 155s time 1 10 2019-02-18 1 days Date NA 155s x 1 10 0 1 WGS 84 FALSE [x] 155s y 1 12 12 -1 WGS 84 FALSE [y] 155s > (a = aggregate(st, "days", mean, na.rm = TRUE)) 155s stars object with 3 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. 155s A1 1 180.75 360.5 360.5 540.25 720 155s dimension(s): 155s from to offset delta refsys point x/y 155s time 1 6 2019-02-20 1 days Date NA 155s x 1 10 0 1 WGS 84 FALSE [x] 155s y 1 12 12 -1 WGS 84 FALSE [y] 155s > yd = function(x) as.POSIXlt(x)$yday 155s > (a = aggregate(st, yd, mean, na.rm = TRUE)) 155s stars object with 3 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. 155s A1 1 180.75 360.5 360.5 540.25 720 155s dimension(s): 155s POLYGON ((0 12, 5 12, 5 6, 0 6, 0 12)) 155s POLYGON ((5 12, 10 12, 10 6, 5 6, 5 12)) 155s POLYGON ((0 6, 5 6, 5 0, 0 0, 0 6)) 155s POLYGON ((5 6, 10 6, 10 0, 5 0, 5 6)) 155s POINT (-10 -10) 155s from to offset delta refsys point values x/y 155s geometry 1 6 NA NA NA NA 50,...,55 155s x 1 10 0 1 WGS 84 FALSE NULL [x] 155s y 1 12 12 -1 WGS 84 FALSE NULL [y] 155s > 155s > # with "by" geometry not overlapping x 155s > pt = st_point(c(-10,-10)) 155s > (sfc = c(sfc, st_sfc(pt, crs = st_crs(sfc)))) 155s Geometry set for 5 features 155s Geometry type: GEOMETRY 155s Dimension: XY 155s Bounding box: xmin: -10 ymin: -10 xmax: 10 ymax: 12 155s Geodetic CRS: WGS 84 155s > (a = aggregate(st, sfc, mean)) 155s stars object with 2 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 155s A1 28 194.25 360.5 360.5 526.75 693 6 155s dimension(s): 155s from to offset delta refsys point 155s geometry 1 5 NA NA WGS 84 FALSE 155s t 1 6 2019-02-20 1 days Date FALSE 155s values 155s geometry POLYGON ((0 12, 5 12, 5 6...,...,POINT (-10 -10) 155s t NULL 155s > (a = aggregate(st, st, mean)) 155s stars object with 2 dimensions and 1 attribute 155s attribute(s): 155s Min. 1st Qu. Median Mean 3rd Qu. Max. 155s A1 1 180.75 360.5 360.5 540.25 720 155s dimension(s): 155s from to offset delta refsys point 155s geometry 1 120 NA NA WGS 84 FALSE 155s t 1 6 2019-02-20 1 days Date FALSE 155s values 155s geometry POLYGON ((0 12, 1 12, 1 1...,...,POLYGON ((9 1, 10 1, 10 0... 155s t NULL 155s > 156s BEGIN TEST align.R 156s 156s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 156s Copyright (C) 2025 The R Foundation for Statistical Computing 156s Platform: aarch64-unknown-linux-gnu 156s 156s R is free software and comes with ABSOLUTELY NO WARRANTY. 156s You are welcome to redistribute it under certain conditions. 156s Type 'license()' or 'licence()' for distribution details. 156s 156s R is a collaborative project with many contributors. 156s Type 'contributors()' for more information and 156s 'citation()' on how to cite R or R packages in publications. 156s 156s Type 'demo()' for some demos, 'help()' for on-line help, or 156s 'help.start()' for an HTML browser interface to help. 156s Type 'q()' to quit R. 156s 156s > suppressPackageStartupMessages(library(stars)) 156s > set.seed(1331) 156s > st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1) 156s Geometry set for 1 feature 156s Geometry type: POINT 156s Dimension: XY 156s Bounding box: xmin: 291430.8 ymin: 9111430 xmax: 291430.8 ymax: 9111430 156s Projected CRS: SIRGAS 2000 / UTM zone 25S 156s > b = st_buffer(st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1), 335) 156s POINT (291430.8 9111430) 156s > bba = stars:::st_align(st_bbox(b), st_dimensions(L7_ETMs)) 156s > 156s > plot(L7_ETMs[,,,1], extent = st_buffer(b, 20), reset = FALSE, key.pos = NULL) 157s > plot(b, add = TRUE, col = NA, border = 'red') 157s > plot(st_as_sfc(st_bbox(b)), col = NA, border = 'red', add = TRUE) 157s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 157s > st_bbox(b) 157s xmin ymin xmax ymax 157s 297116.8 9119404.1 297786.8 9120074.1 157s > bba 157s xmin ymin xmax ymax 157s 297098.3 9119392.8 297810.8 9120076.8 157s > 157s > plot(L7_ETMs[,,,1], reset = FALSE, key.pos = NULL) 157s > plot(b, col = 'red', add = TRUE) 157s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 157s > 157s > b0 = st_buffer(b, -100) 157s > L7 = st_as_stars(L7_ETMs)[b0][,,,1] |> st_normalize() 157s > bbb = stars:::st_align(st_bbox(b), st_dimensions(L7)) 157s > plot(L7, extent = st_buffer(b, 120), reset = FALSE, key.pos = NULL) 157s > plot(st_as_sfc(st_bbox(L7)), col = NA, border = 'black', add = TRUE) 157s > plot(st_as_sfc(bbb), col = NA, border = 'blue', add = TRUE) 157s > plot(b, col = NA, border = 'red', add = TRUE) 157s > 157s > all.equal(bbb, bba) 157s [1] TRUE 157s > 157s BEGIN TEST area.R 157s 157s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 157s Copyright (C) 2025 The R Foundation for Statistical Computing 157s Platform: aarch64-unknown-linux-gnu 157s 157s R is free software and comes with ABSOLUTELY NO WARRANTY. 157s You are welcome to redistribute it under certain conditions. 157s Type 'license()' or 'licence()' for distribution details. 157s 157s R is a collaborative project with many contributors. 157s Type 'contributors()' for more information and 157s 'citation()' on how to cite R or R packages in publications. 157s 157s Type 'demo()' for some demos, 'help()' for on-line help, or 157s 'help.start()' for an HTML browser interface to help. 157s Type 'q()' to quit R. 157s 157s > suppressPackageStartupMessages(library(stars)) 157s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 157s > x = read_stars(tif) 158s > (a = st_area(x[,1:5,1:5])) 158s stars object with 2 dimensions and 1 attribute 158s attribute(s): 158s Min. 1st Qu. Median Mean 3rd Qu. Max. 158s area [m^2] 812.25 812.25 812.25 812.25 812.25 812.25 158s dimension(s): 158s from to offset delta refsys point x/y 158s x 1 5 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 158s y 1 5 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 158s > 158s > m = matrix(1:20, nrow = 5, ncol = 4) 158s > x = c(0, 0.5, 1, 2, 4, 5) # 6 numbers: boundaries! 158s > y = c(0.3, 0.5, 1, 2, 2.2) # 5 numbers: boundaries! 158s > (r = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 158s stars object with 2 dimensions and 1 attribute 158s attribute(s): 158s Min. 1st Qu. Median Mean 3rd Qu. Max. 158s m 1 5.75 10.5 10.5 15.25 20 158s dimension(s): 158s from to point values x/y 158s x 1 5 FALSE [0,0.5),...,[4,5) [x] 158s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 158s > # image(r, axes = TRUE, col = grey((1:20)/20)) 158s > (a = st_area(r)) 158s Missing coordinate reference system: assuming Cartesian coordinates 158s stars object with 2 dimensions and 1 attribute 158s attribute(s): 158s Min. 1st Qu. Median Mean 3rd Qu. Max. 158s area 0.1 0.2 0.325 0.475 0.5 2 158s dimension(s): 158s from to point values x/y 158s x 1 5 FALSE [0,0.5),...,[4,5) [x] 158s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 158s > #plot(a, axes = TRUE) 158s > 158s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 158s > if (s5p != "") { 158s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 158s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 158s + if (inherits(nit.c[[1]], "units")) 158s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 158s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 158s + st_crs(nit.c) = 4326 158s + print((a <- st_area(nit.c[,1:5,1:5]))) 158s + # plot(a, axes = TRUE, border = NA) 158s + } 158s > 158s BEGIN TEST crop.R 158s 158s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 158s Copyright (C) 2025 The R Foundation for Statistical Computing 158s Platform: aarch64-unknown-linux-gnu 158s 158s R is free software and comes with ABSOLUTELY NO WARRANTY. 158s You are welcome to redistribute it under certain conditions. 158s Type 'license()' or 'licence()' for distribution details. 158s 158s R is a collaborative project with many contributors. 158s Type 'contributors()' for more information and 158s 'citation()' on how to cite R or R packages in publications. 158s 158s Type 'demo()' for some demos, 'help()' for on-line help, or 158s 'help.start()' for an HTML browser interface to help. 158s Type 'q()' to quit R. 158s 158s > suppressPackageStartupMessages(library(stars)) 158s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 158s > x = read_stars(tif) 158s > xy = structure(list(x = c(293253.999046018, 296400.196497684), y = c(9113801.64775462, 158s + 9111328.49619133)), .Names = c("x", "y")) 158s > pts = st_as_sf(data.frame(do.call(cbind, xy)), coords = c("x", "y"), crs = st_crs(x)) 158s > image(x, axes = TRUE) 158s > plot(st_as_sfc(st_bbox(pts)), col = NA, add = TRUE) 158s > 158s > bb = st_bbox(pts) 158s > (xx = x[bb]) 158s stars object with 3 dimensions and 1 attribute 158s attribute(s): 158s Min. 1st Qu. Median Mean 3rd Qu. Max. 158s L7_ETMs.tif 3 56 73 70.87303 89 255 158s dimension(s): 159s from to offset delta refsys point x/y 159s x 158 268 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 159s y 245 331 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 159s band 1 6 NA NA NA NA 159s > image(xx) 159s > plot(st_as_sfc(bb), add = TRUE, col = NA) 159s > st_contains(st_as_sfc(st_bbox(xx)), st_as_sfc(st_bbox(pts))) 159s Sparse geometry binary predicate list of length 1, where the predicate 159s was `contains' 159s 1: 1 159s > 159s > image(x) 159s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 159s > buf = st_buffer(st_sfc(pt, crs = st_crs(x)), 1500) 159s > plot(buf, add = TRUE) 159s > 159s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 159s + crs = st_crs(x)) 159s > image(x[buf]) 159s > plot(buf, add = TRUE, col = NA) 159s > image(x[buf,crop=FALSE]) 159s > plot(buf, add = TRUE, col = NA) 159s > 159s > plot(x, rgb = 1:3) 160s > 160s > # #638: 160s > l = st_as_stars(L7_ETMs) 160s > st_bbox(l) |> st_as_sfc() -> bb 160s > (bb + 1e6) |> st_set_crs(st_crs(l)) -> b 160s > st_crop(l, b) 160s stars object with 3 dimensions and 1 attribute 160s attribute(s): 160s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 160s L7_ETMs NA NA NA NaN NA NA 737088 160s dimension(s): 160s from to offset delta refsys point x/y 160s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 160s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 160s band 1 6 NA NA NA NA 160s Warning message: 160s In st_crop.stars(l, b) :> st_intersects(b, st_as_sfc(st_bbox(l))) |> as.matrix() 160s st_crop: bounding boxes of x and y do not overlap 160s [,1] 160s [1,] FALSE 160s > (bb - 1e6) |> st_set_crs(st_crs(l)) -> b 160s > st_crop(l, b) 161s stars object with 3 dimensions and 1 attribute 161s attribute(s): 161s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 161s L7_ETMs NA NA NA NaN NA NA 737088 161s dimension(s): 161s from to offset delta refsys point x/y 161s x Warning message: 161s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 161s 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 161s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 161s band 1 6 NA NA NA NA 161s > 161s BEGIN TEST curvilinear.R 161s 161s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 161s Copyright (C) 2025 The R Foundation for Statistical Computing 161s Platform: aarch64-unknown-linux-gnu 161s 161s R is free software and comes with ABSOLUTELY NO WARRANTY. 161s You are welcome to redistribute it under certain conditions. 161s Type 'license()' or 'licence()' for distribution details. 161s 161s R is a collaborative project with many contributors. 161s Type 'contributors()' for more information and 161s 'citation()' on how to cite R or R packages in publications. 161s 161s Type 'demo()' for some demos, 'help()' for on-line help, or 161s 'help.start()' for an HTML browser interface to help. 161s Type 'q()' to quit R. 161s 161s > suppressPackageStartupMessages(library(stars)) 162s > 162s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 162s > if (s5p != "") { 162s + 162s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 162s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 162s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 162s + lat = read_stars(lat_ds) 162s + lon = read_stars(lon_ds) 162s + nit = read_stars(nit_ds) 162s + nit[[1]][nit[[1]] > 9e+36] = NA 162s + 162s + ll = setNames(c(lon, lat), c("x", "y")) 162s + nit.c0 = st_as_stars(nit, curvilinear = ll) 162s + 162s + # more direct method: 162s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 162s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 162s + if (inherits(nit.c[[1]], "units")) 162s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 162s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 162s + all.equal(nit.c0, nit.c) 162s + st_crs(nit.c) = 4326 162s + print(nit.c) 162s + 162s + if (FALSE && capabilities()["png"]) { 162s + png("nit1.png", 800, 800) 162s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 162s + maps::map('world', add = TRUE, col = 'red') 162s + dev.off() 162s + 162s + png("nit2.png", 800, 800) 162s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 162s + maps::map('world', add = TRUE, col = 'red') 162s + dev.off() 162s + 162s + nit.c = stars:::st_downsample(nit.c, 8) 162s + print(nit.c) 162s + 162s + png("nit3.png", 800, 800) 162s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 162s + maps::map('world', add = TRUE, col = 'red') 162s + dev.off() 162s + 162s + png("nit4.png", 800, 800) 162s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 162s + maps::map('world', add = TRUE, col = 'red') 162s + dev.off() 162s + } 162s + 162s + } 162s > 162s BEGIN TEST datasets.R 162s 162s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 162s Copyright (C) 2025 The R Foundation for Statistical Computing 162s Platform: aarch64-unknown-linux-gnu 162s 162s R is free software and comes with ABSOLUTELY NO WARRANTY. 162s You are welcome to redistribute it under certain conditions. 162s Type 'license()' or 'licence()' for distribution details. 162s 162s R is a collaborative project with many contributors. 162s Type 'contributors()' for more information and 162s 'citation()' on how to cite R or R packages in publications. 162s 162s Type 'demo()' for some demos, 'help()' for on-line help, or 162s 'help.start()' for an HTML browser interface to help. 162s Type 'q()' to quit R. 162s 162s > suppressPackageStartupMessages(library(stars)) 162s > bcsd_obs 162s stars_proxy object with 2 attributes in 2 file(s): 162s $foo 162s [1] "[...]/bcsd_obs_1999.nc:pr" 162s 162s $bar 162s [1] "[...]/bcsd_obs_1999.nc:tas" 162s 162s dimension(s): 162s from to offset delta refsys values x/y 162s x 1 81 -85 0.125 NA NULL [x] 162s y 1 33 37.12 -0.125 NA NULL [y] 162s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 162s > L7_ETMs 162s stars_proxy object with 1 attribute in 1 file(s): 162s $L7_ETMs 162s [1] "[...]/L7_ETMs.tif" 162s 162s dimension(s): 162s from to offset delta refsys point x/y 162s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 162s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 162s band 1 6 NA NA NA NA 162s > if (require(starsdata, quietly = TRUE)) { 162s + print(stars_sentinel2) 162s + } 162s > 162s BEGIN TEST dimensions.R 162s 162s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 162s Copyright (C) 2025 The R Foundation for Statistical Computing 162s Platform: aarch64-unknown-linux-gnu 162s 162s R is free software and comes with ABSOLUTELY NO WARRANTY. 162s You are welcome to redistribute it under certain conditions. 162s Type 'license()' or 'licence()' for distribution details. 162s 162s R is a collaborative project with many contributors. 162s Type 'contributors()' for more information and 162s 'citation()' on how to cite R or R packages in publications. 162s 162s Type 'demo()' for some demos, 'help()' for on-line help, or 162s 'help.start()' for an HTML browser interface to help. 162s Type 'q()' to quit R. 162s 163s > # https://github.com/r-spatial/stars/issues/295 163s > suppressPackageStartupMessages(library(stars)) 163s > raw <- read_stars(system.file("nc/bcsd_obs_1999.nc", package = "stars")) 163s pr, tas, 163s > foo <- function(x, idx) stats::lowess(idx, x)$y 163s > 163s > timeline <- st_get_dimension_values(raw, "time") 163s > smooth = st_apply(raw, 163s + MARGIN = c("x", "y"), 163s + FUN = foo, 163s + idx = st_get_dimension_values(raw, "time") 163s + ) 164s > 164s > st_set_dimensions(smooth, 164s + which = "foo", 164s + values = st_get_dimension_values(raw, "time"), 164s + names = "time" 164s + ) 164s stars object with 3 dimensions and 2 attributes 164s attribute(s): 164s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 164s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 164s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 164s dimension(s): 164s from to offset delta refsys values x/y 164s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 164s x 1 81 -85 0.125 NA NULL [x] 164s y 1 33 37.12 -0.125 NA NULL [y] 164s > 164s > raw %>% 164s + st_apply(MARGIN = c("x", "y"), FUN = foo, idx = timeline) %>% 164s + st_set_dimensions("foo", st_dimensions(raw)["time"]) 164s stars object with 3 dimensions and 2 attributes 164s attribute(s): 164s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 164s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 164s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 164s dimension(s): 164s from to offset delta refsys values x/y 164s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 164s x 1 81 -85 0.125 NA NULL [x] 164s y 1 33 37.12 -0.125 NA NULL [y] 164s > 164s BEGIN TEST downsample.R 164s 164s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 164s Copyright (C) 2025 The R Foundation for Statistical Computing 164s Platform: aarch64-unknown-linux-gnu 164s 164s R is free software and comes with ABSOLUTELY NO WARRANTY. 164s You are welcome to redistribute it under certain conditions. 164s Type 'license()' or 'licence()' for distribution details. 164s 164s R is a collaborative project with many contributors. 164s Type 'contributors()' for more information and 164s 'citation()' on how to cite R or R packages in publications. 164s 164s Type 'demo()' for some demos, 'help()' for on-line help, or 164s 'help.start()' for an HTML browser interface to help. 164s Type 'q()' to quit R. 164s 164s > suppressPackageStartupMessages(library(stars)) 165s > m = matrix(1:121, 11, 11) 165s > m 165s [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] 165s [1,] 1 12 23 34 45 56 67 78 89 100 111 165s [2,] 2 13 24 35 46 57 68 79 90 101 112 165s [3,] 3 14 25 36 47 58 69 80 91 102 113 165s [4,] 4 15 26 37 48 59 70 81 92 103 114 165s [5,] 5 16 27 38 49 60 71 82 93 104 115 165s [6,] 6 17 28 39 50 61 72 83 94 105 116 165s [7,] 7 18 29 40 51 62 73 84 95 106 117 165s [8,] 8 19 30 41 52 63 74 85 96 107 118 165s [9,] 9 20 31 42 53 64 75 86 97 108 119 165s [10,] 10 21 32 43 54 65 76 87 98 109 120 165s [11,] 11 22 33 44 55 66 77 88 99 110 121 165s > s = st_as_stars(m) 165s > st_downsample(s, 1) 165s stars object with 2 dimensions and 1 attribute 165s attribute(s): 165s Min. 1st Qu. Median Mean 3rd Qu. Max. 165s A1 1 28.5 61 61 93.5 121 165s dimension(s): 165s from to offset delta point x/y 165s X1 1 6 0 2 FALSE [x] 165s X2 1 6 0 2 FALSE [y] 165s > st_downsample(s, 1)[[1]] 165s [,1] [,2] [,3] [,4] [,5] [,6] 165s [1,] 1 23 45 67 89 111 165s [2,] 3 25 47 69 91 113 165s [3,] 5 27 49 71 93 115 165s [4,] 7 29 51 73 95 117 165s [5,] 9 31 53 75 97 119 165s [6,] 11 33 55 77 99 121 165s > st_downsample(s, 1, offset = 1) 165s stars object with 2 dimensions and 1 attribute 165s attribute(s): 165s Min. 1st Qu. Median Mean 3rd Qu. Max. 165s A1 13 37 61 61 85 109 165s dimension(s): 165s from to offset delta point x/y 165s X1 1 5 1 2 FALSE [x] 165s X2 1 5 1 2 FALSE [y] 165s > st_downsample(s, 1, offset = 1)[[1]] 165s [,1] [,2] [,3] [,4] [,5] 165s [1,] 13 35 57 79 101 165s [2,] 15 37 59 81 103 165s [3,] 17 39 61 83 105 165s [4,] 19 41 63 85 107 165s [5,] 21 43 65 87 109 165s > st_downsample(s, 1, FUN = mean) 165s stars object with 2 dimensions and 1 attribute 165s attribute(s): 165s Min. 1st Qu. Median Mean 3rd Qu. Max. 165s A1 7 31 55 55 79 103 165s dimension(s): 165s from to offset delta point x/y 165s X1 1 5 0 2 FALSE [x] 165s X2 1 5 0 2 FALSE [y] 165s > st_downsample(s, 1, FUN = mean)[[1]] 165s [,1] [,2] [,3] [,4] [,5] 165s [1,] 7 29 51 73 95 165s [2,] 9 31 53 75 97 165s [3,] 11 33 55 77 99 165s [4,] 13 35 57 79 101 165s [5,] 15 37 59 81 103 165s > st_downsample(s, 1, offset = 1, FUN = mean) 165s stars object with 2 dimensions and 1 attribute 165s attribute(s): 165s Min. 1st Qu. Median Mean 3rd Qu. Max. 165s A1 19 43 67 67 91 115 165s dimension(s): 165s from to offset delta point x/y 165s X1 1 5 1 2 FALSE [x] 165s X2 1 5 1 2 FALSE [y] 165s > st_downsample(s, 1, offset = c(0,1), FUN = mean)[[1]] 165s [,1] [,2] [,3] [,4] [,5] 165s [1,] 18 40 62 84 106 165s [2,] 20 42 64 86 108 165s [3,] 22 44 66 88 110 165s [4,] 24 46 68 90 112 165s [5,] 26 48 70 92 114 165s > st_downsample(s, 1, offset = c(0,1)) 165s stars object with 2 dimensions and 1 attribute 165s attribute(s): 165s Min. 1st Qu. Median Mean 3rd Qu. Max. 165s A1 12 36.5 61 61 85.5 110 165s dimension(s): 165s from to offset delta point x/y 165s X1 1 6 0 2 FALSE [x] 165s X2 1 5 1 2 FALSE [y] 165s > st_downsample(s, 1, offset = c(0,1))[[1]] 165s [,1] [,2] [,3] [,4] [,5] 165s [1,] 12 34 56 78 100 165s [2,] 14 36 58 80 102 165s [3,] 16 38 60 82 104 165s [4,] 18 40 62 84 106 165s [5,] 20 42 64 86 108 165s [6,] 22 44 66 88 110 165s > 165s BEGIN TEST ee.R 165s 165s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 165s Copyright (C) 2025 The R Foundation for Statistical Computing 165s Platform: aarch64-unknown-linux-gnu 165s 165s R is free software and comes with ABSOLUTELY NO WARRANTY. 165s You are welcome to redistribute it under certain conditions. 165s Type 'license()' or 'licence()' for distribution details. 165s 165s R is a collaborative project with many contributors. 165s Type 'contributors()' for more information and 165s 'citation()' on how to cite R or R packages in publications. 165s 165s Type 'demo()' for some demos, 'help()' for on-line help, or 165s 'help.start()' for an HTML browser interface to help. 165s Type 'q()' to quit R. 165s 165s > # show that extract with exact=TRUE equals st_interpolate_aw(), only much faster 165s > options(digits=15) 165s > suppressPackageStartupMessages(library(stars)) 165s > L = st_as_stars(L7_ETMs)[,,,1] 165s > set.seed(123432) 165s > st_bbox(L) |> 165s + st_as_sfc() |> 165s + st_centroid() |> 165s + st_buffer(50) |> 165s + st_sample(10) |> 165s + st_combine() |> 165s + st_convex_hull() -> ch 165s > if (interactive()) { 165s + plot(L, reset = FALSE) 165s + plot(ch, add = TRUE, border = 'red', col = NA) 165s + } 165s > if (FALSE) { 165s + e = st_extract(L, ch)[[1]] 165s + a = aggregate(L, ch, mean)[[1]] 165s + identical(e, a) # same code path 165s + ee = aggregate(L, ch, mean, exact = TRUE)[[1]] 165s + all.equal(e, ee) 165s + aw = suppressWarnings(st_interpolate_aw(L, ch, extensive = FALSE)$V1) 165s + all.equal(as.vector(ee), aw) 165s + ee0 = st_extract(L, ch, exact = TRUE)[[1]] 165s + all.equal(ee0, ee) # ?? 165s + } 165s > 165s BEGIN TEST extract.R 166s 166s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 166s Copyright (C) 2025 The R Foundation for Statistical Computing 166s Platform: aarch64-unknown-linux-gnu 166s 166s R is free software and comes with ABSOLUTELY NO WARRANTY. 166s You are welcome to redistribute it under certain conditions. 166s Type 'license()' or 'licence()' for distribution details. 166s 166s R is a collaborative project with many contributors. 166s Type 'contributors()' for more information and 166s 'citation()' on how to cite R or R packages in publications. 166s 166s Type 'demo()' for some demos, 'help()' for on-line help, or 166s 'help.start()' for an HTML browser interface to help. 166s Type 'q()' to quit R. 166s 166s > # Create 'stars' object 166s > set.seed(1331) 166s > suppressPackageStartupMessages(library(stars)) 166s > volcano = rbind(volcano, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA) # add NA rows 166s > d = st_dimensions(x = 1:ncol(volcano), y = 1:nrow(volcano)) 166s > (r = st_as_stars(t(volcano))) 166s stars object with 2 dimensions and 1 attribute 166s attribute(s): 166s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 166s A1 94 108 124 130.1879 150 195 732 166s dimension(s): 166s from to offset delta point x/y 166s X1 1 61 0 1 FALSE [x] 166s X2 1 99 0 1 FALSE [y] 166s > r = st_set_dimensions(r, 1, offset = 0, delta = 1) 166s > r = st_set_dimensions(r, 2, offset = nrow(volcano), delta = -1) 166s > 166s > # Create points 166s > pnt = st_sample(st_as_sfc(st_bbox(r)), 100) 166s > pnt = st_as_sf(pnt) 166s > 166s > # Extract - 'st_join' 166s > x = st_join(pnt, st_as_sf(r)) 166s > 166s > # Extract - 'st_extract' 166s > y = st_extract(r, pnt) 166s > 166s > # check there are NA's: 166s > any(is.na(x)) 166s [1] TRUE 166s > # Compare 166s > all.equal(x$A1, y[[1]]) 166s [1] TRUE 166s > 166s > ################################################ 166s > if (FALSE) { 166s + 166s + ## tic: segfaults 166s + # check equal results with stars_proxy: 166s + #x = st_extract(stars:::st_as_stars_proxy(r), pnt) 166s + #all.equal(x$A1, y[[1]]) 166s + #all.equal(x, y) 166s + 166s + r = c(r, 2*r, 10*r) 166s + x = st_join(pnt, st_as_sf(r)) 166s + y = st_as_sf(st_extract(r, pnt)) 166s + all.equal(x, y) 166s + 166s + ## tic: segfaults 166s + #x = st_extract(stars:::st_as_stars_proxy(merge(r)), pnt) 166s + #all.equal(st_as_sf(x), y) 166s + 166s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 166s + xp = read_stars(tif, proxy = TRUE) 166s + xm = read_stars(tif, proxy = FALSE) 166s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 166s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 166s + em = st_extract(xm, pts) 166s + if (utils::packageVersion("sf") >= "0.9-7") { 166s + ep = st_extract(xp, pts) 166s + print(all.equal(ep, em, check.attributes = TRUE)) 166s + } 166s + 166s + # two-attribute objects: 166s + library(stars) 166s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 166s + xp = read_stars(c(tif, tif), proxy = TRUE) 166s + xm = read_stars(c(tif, tif), proxy = FALSE) 166s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 166s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 166s + em = st_extract(xm, pts) 166s + if (utils::packageVersion("sf") >= "0.9-7") { 166s + ep = st_extract(xp, pts) 166s + print(all.equal(ep, em, check.attributes = TRUE)) 166s + } 166s + 166s + # single-attribute, single raster objects: 166s + tif1 = paste0(tempfile(), ".tif") 166s + write_stars(xm[1,,,1], "x.tif") 166s + xp = read_stars("x.tif", proxy = TRUE) 166s + xm = read_stars("x.tif", proxy = FALSE) 166s + em = st_extract(xm, pts) 166s + if (utils::packageVersion("sf") >= "0.9-7") { 166s + ep = st_extract(xp, pts) 166s + print(all.equal(ep, em, check.attributes = TRUE)) 166s + } 166s + 166s + # multiple-file attributes: 166s + x = c( 166s + "avhrr-only-v2.19810901.nc", 166s + "avhrr-only-v2.19810902.nc", 166s + "avhrr-only-v2.19810903.nc", 166s + "avhrr-only-v2.19810904.nc", 166s + "avhrr-only-v2.19810905.nc", 166s + "avhrr-only-v2.19810906.nc", 166s + "avhrr-only-v2.19810907.nc", 166s + "avhrr-only-v2.19810908.nc", 166s + "avhrr-only-v2.19810909.nc" 166s + ) 166s + file_list = system.file(paste0("netcdf/", x), package = "starsdata") 166s + if (!identical(file_list, "")) { 166s + y = read_stars(file_list, quiet = TRUE) 166s + print(y) 166s + st_crs(y) = "OGC:CRS84" 166s + pts = st_sample(st_as_sfc(st_bbox(y)), 10) 166s + em = st_extract(y, pts) 166s + 166s + (y = read_stars(file_list, quiet = TRUE, proxy = TRUE)) 166s + print(y) 166s + st_crs(y) = "OGC:CRS84" 166s + if (utils::packageVersion("sf") >= "0.9-7") { 166s + ep = st_extract(y, pts) 166s + print(all.equal(em, ep)) 166s + } 166s + } 166s + 166s + # nearest & bilinear comparison: 166s + if (utils::packageVersion("sf") >= "0.9-7") { 166s + set.seed(12331) 166s + s = st_as_stars(matrix(rnorm(16), 4)) 166s + pts = st_sample(st_as_sfc(st_bbox(s)), 10000, type = "regular") 166s + s1 = st_extract(s, pts, bilinear = FALSE) 166s + s2 = st_extract(s, pts, bilinear = TRUE) 166s + s1$s2 = s2[[1]] 166s + names(s1)[c(1,3)] = c("nearest", "bilinear") 166s + print(s1[sample(10000, 5),]) 166s + } 166s + } 166s > 166s BEGIN TEST gridtypes.R 166s 166s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 166s Copyright (C) 2025 The R Foundation for Statistical Computing 166s Platform: aarch64-unknown-linux-gnu 166s 166s R is free software and comes with ABSOLUTELY NO WARRANTY. 166s You are welcome to redistribute it under certain conditions. 166s Type 'license()' or 'licence()' for distribution details. 166s 166s R is a collaborative project with many contributors. 166s Type 'contributors()' for more information and 166s 'citation()' on how to cite R or R packages in publications. 166s 166s Type 'demo()' for some demos, 'help()' for on-line help, or 166s 'help.start()' for an HTML browser interface to help. 166s Type 'q()' to quit R. 166s 166s > suppressPackageStartupMessages(library(stars)) 167s > 167s > # regular, but not spatial: 167s > d = st_dimensions(a = 1:3, b = 1:3, band = c("foo", "bar")) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values 167s a 1 3 1 1 FALSE NULL 167s b 1 3 1 1 FALSE NULL 167s band 1 2 NA NA FALSE foo, bar 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s a b band X 167s 1 1 1 foo 1 167s 2 2 1 foo 2 167s 3 3 1 foo 3 167s 4 1 2 foo 4 167s > try(x <- st_bbox(st)) # error 167s Error in st_bbox.dimensions(st_dimensions(obj), ...) : 167s dimensions table does not have x & y, nor an sfc dimension 167s > 167s > # regular, geotransform: 167s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values x/y 167s x 1 3 1 1 FALSE NULL [x] 167s y 1 3 1 1 FALSE NULL [y] 167s band 1 2 NA NA FALSE foo, bar 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s x y band X 167s 1 1.5 1.5 foo 1 167s 2 2.5 1.5 foo 2 167s 3 3.5 1.5 foo 3 167s 4 1.5 2.5 foo 4 167s > as.data.frame(st, add_max=TRUE)[1:4,] 167s x y band x_max y_max X 167s 1 1 1 foo 2 2 1 167s 2 2 1 foo 3 2 2 167s 3 3 1 foo 4 2 3 167s 4 1 2 foo 2 3 4 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 1 1 4 4 167s > 167s > # rectilinear with offset given: 167s > xd = c(1, 2, 4) 167s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values x/y 167s x 1 3 NA NA FALSE [1,2), [2,4), [4,6) [x] 167s y 1 3 1 1 FALSE NULL [y] 167s band 1 2 NA NA FALSE foo, bar 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s x y band X 167s 1 1.5 1.5 foo 1 167s 2 3.0 1.5 foo 2 167s 3 5.0 1.5 foo 3 167s 4 1.5 2.5 foo 4 167s > as.data.frame(st, add_max=TRUE)[1:4,] 167s x y band x_max y_max X 167s 1 1 1 foo 2 2 1 167s 2 2 1 foo 4 2 2 167s 3 4 1 foo 6 2 3 167s 4 1 2 foo 2 3 4 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 1 1 6 4 167s > 167s > # rectilinear with midpoints given: 167s > xd = c(1, 2, 4) 167s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values x/y 167s x 1 3 NA NA FALSE [0.5,1.5), [1.5,3.0), [3.0,5.0) [x] 167s y 1 3 0.5 1 FALSE NULL [y] 167s band 1 2 NA NA FALSE foo, bar 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s x y band X 167s 1 1.00 1 foo 1 167s 2 2.25 1 foo 2 167s 3 4.00 1 foo 3 167s 4 1.00 2 foo 4 167s > as.data.frame(st, add_max=TRUE)[1:4,] 167s x y band x_max y_max X 167s 1 0.5 0.5 foo 1.5 1.5 1 167s 2 1.5 0.5 foo 3.0 1.5 2 167s 3 3.0 0.5 foo 5.0 1.5 3 167s 4 0.5 1.5 foo 1.5 2.5 4 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 0.5 0.5 5.0 3.5 167s > 167s > # rectilinear with midpoints given, point support 167s > xd = c(1, 2, 4) 167s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE, point = TRUE) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values x/y 167s x 1 3 NA NA TRUE 1, 2, 4 [x] 167s y 1 3 0.5 1 TRUE NULL [y] 167s band 1 2 NA NA TRUE foo, bar 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s x y band X 167s 1 1 1 foo 1 167s 2 2 1 foo 2 167s 3 4 1 foo 3 167s 4 1 2 foo 4 167s > as.data.frame(st, add_max=TRUE)[1:4,] 167s x y band x_max y_max X 167s 1 1 0.5 foo 1 1.5 1 167s 2 2 0.5 foo 2 1.5 2 167s 3 4 0.5 foo 4 1.5 3 167s 4 1 1.5 foo 1 2.5 4 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 1.0 0.5 4.0 3.5 167s > 167s > # rectilinear with start/end given: 167s > #xd = stars:::make_intervals(start = c(1,2,4), end = c(2, 4, 8)) 167s > xd = c(1, 2, 4, 8) # one more than dim of the data array 167s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values x/y 167s x 1 3 NA NA FALSE [1,2), [2,4), [4,8) [x] 167s y 1 3 1 1 FALSE NULL [y] 167s band 1 2 NA NA FALSE foo, bar 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s x y band X 167s 1 1.5 1.5 foo 1 167s 2 3.0 1.5 foo 2 167s 3 6.0 1.5 foo 3 167s 4 1.5 2.5 foo 4 167s > as.data.frame(st, add_max=TRUE)[1:4,] 167s x y band x_max y_max X 167s 1 1 1 foo 2 2 1 167s 2 2 1 foo 4 2 2 167s 3 4 1 foo 8 2 3 167s 4 1 2 foo 2 3 4 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 1 1 8 4 167s > 167s > # with sfc: 167s > sfc = st_sfc(st_point(0:1), st_point(2:1), st_point(4:3)) 167s > d = st_dimensions(x = sfc, y = 1:3, band = c("foo", "bar")) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values 167s x 1 3 NA NA TRUE POINT (0 1),...,POINT (4 3) 167s y 1 3 1 1 FALSE NULL 167s band 1 2 NA NA FALSE foo, bar 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s x y band X 167s 1 POINT (0 1) 1 foo 1 167s 2 POINT (2 1) 1 foo 2 167s 3 POINT (4 3) 1 foo 3 167s 4 POINT (0 1) 2 foo 4 167s > st_as_sf(st, long = TRUE)[1:4,] 167s Simple feature collection with 4 features and 3 fields 167s Geometry type: POINT 167s Dimension: XY 167s Bounding box: xmin: 0 ymin: 1 xmax: 4 ymax: 3 167s CRS: NA 167s y band X x 167s 1 1 foo 1 POINT (0 1) 167s 2 1 foo 2 POINT (2 1) 167s 3 1 foo 3 POINT (4 3) 167s 4 2 foo 4 POINT (0 1) 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 0 1 4 3 167s > 167s > # rotated/sheared: 167s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), affine = c(0.2, -0.2)) 167s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 167s stars object with 3 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 5.25 9.5 9.5 13.75 18 167s dimension(s): 167s from to offset delta point values x/y 167s x 1 3 1 1 FALSE NULL [x] 167s y 1 3 1 1 FALSE NULL [y] 167s band 1 2 NA NA FALSE foo, bar 167s Error in st_coordinates.stars(x, add_max = add_max, center = center, ...) : 167s add_max will not work for rotated/shared rasters 167s sheared raster with parameters: 0.2 -0.2 167s > as.data.frame(st, add_max=FALSE)[1:4,] 167s x y X 167s 1 1.6 1.4 1 167s 2 2.6 1.2 2 167s 3 3.6 1.0 3 167s 4 1.8 2.4 4 167s > try(as.data.frame(st, add_max=TRUE)[1:4,]) # errors 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 1.0 0.4 4.6 4.0 167s > 167s > # curvilinear: 167s > set.seed(13531) 167s > lon = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 167s > lat = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 167s > ll = setNames(c(lon, lat), c("lon", "lat")) 167s > d = st_dimensions(lon = 1:3, lat = 1:3) 167s > a = st_as_stars(list(X = array(1:9, c(3,3))), dimensions = d) 167s > (st = st_as_stars(a, curvilinear = ll)) 167s stars object with 2 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s X 1 3 5 5 7 9 167s dimension(s): 167s from to refsys point values x/y 167s lon 1 3 WGS 84 (CRS84) FALSE [3x3] 0.03,...,0.89 [x] 167s lat 1 3 WGS 84 (CRS84) FALSE [3x3] 0.021,...,0.89 [y] 167s curvilinear grid 167s > as.data.frame(st) 167s lon lat X 167s 1 0.89 0.250 1 167s 2 0.64 0.510 2 167s 3 0.30 0.670 3 167s 4 0.69 0.890 4 167s 5 0.47 0.890 5 167s 6 0.26 0.190 6 167s 7 0.57 0.021 7 167s 8 0.27 0.220 8 167s 9 0.03 0.340 9 167s > st_bbox(st) 167s xmin ymin xmax ymax 167s 0.030 0.021 0.890 0.890 167s > 167s > # time regular: 167s > t = as.Date("2019-01-20") + 0:3 167s > d = st_dimensions(t, sfc) 167s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 167s stars object with 2 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s a 1 3.75 6.5 6.5 9.25 12 167s dimension(s): 167s from to offset delta refsys point values 167s X1 1 4 2019-01-20 1 days Date FALSE NULL 167s X2 1 3 NA NA NA TRUE POINT (0 1),...,POINT (4 3) 167s > as.data.frame(st) 167s X1 X2 a 167s 1 2019-01-20 POINT (0 1) 1 167s 2 2019-01-21 POINT (0 1) 2 167s 3 2019-01-22 POINT (0 1) 3 167s 4 2019-01-23 POINT (0 1) 4 167s 5 2019-01-20 POINT (2 1) 5 167s 6 2019-01-21 POINT (2 1) 6 167s 7 2019-01-22 POINT (2 1) 7 167s 8 2019-01-23 POINT (2 1) 8 167s 9 2019-01-20 POINT (4 3) 9 167s 10 2019-01-21 POINT (4 3) 10 167s 11 2019-01-22 POINT (4 3) 11 167s 12 2019-01-23 POINT (4 3) 12 167s > 167s > # time, rectilinear 167s > t = as.Date("2019-01-20") + c(0, 2, 3, 10) 167s > d = st_dimensions(t, sfc) 167s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 167s stars object with 2 dimensions and 1 attribute 167s attribute(s): 167s Min. 1st Qu. Median Mean 3rd Qu. Max. 167s a 1 3.75 6.5 6.5 9.25 12 167s dimension(s): 167s from to refsys point values 167s X1 1 4 Date FALSE 2019-01-20,...,2019-01-30 167s X2 1 3 NA TRUE POINT (0 1),...,POINT (4 3) 167s > as.data.frame(st) 167s X1 X2 a 167s 1 2019-01-20 POINT (0 1) 1 167s 2 2019-01-22 POINT (0 1) 2 167s 3 2019-01-23 POINT (0 1) 3 167s 4 2019-01-30 POINT (0 1) 4 167s 5 2019-01-20 POINT (2 1) 5 167s 6 2019-01-22 POINT (2 1) 6 167s 7 2019-01-23 POINT (2 1) 7 167s 8 2019-01-30 POINT (2 1) 8 167s 9 2019-01-20 POINT (4 3) 9 167s 10 2019-01-22 POINT (4 3) 10 167s 11 2019-01-23 POINT (4 3) 11 167s 12 2019-01-30 POINT (4 3) 12 167s > 167s BEGIN TEST mdim.R 167s 167s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 167s Copyright (C) 2025 The R Foundation for Statistical Computing 167s Platform: aarch64-unknown-linux-gnu 167s 167s R is free software and comes with ABSOLUTELY NO WARRANTY. 167s You are welcome to redistribute it under certain conditions. 167s Type 'license()' or 'licence()' for distribution details. 167s 167s R is a collaborative project with many contributors. 167s Type 'contributors()' for more information and 167s 'citation()' on how to cite R or R packages in publications. 167s 167s Type 'demo()' for some demos, 'help()' for on-line help, or 167s 'help.start()' for an HTML browser interface to help. 167s Type 'q()' to quit R. 167s 167s > Sys.setenv(TZ="") 167s > suppressPackageStartupMessages(library(stars)) 168s > matrix(1:4,2) 168s [,1] [,2] 168s [1,] 1 3 168s [2,] 2 4 168s > m = matrix(1:4,2) 168s > s = st_as_stars(m) 168s > 168s > s = st_set_dimensions(s, st_dimensions(s), xy = NULL) 168s > sfc = st_sfc(st_point(0:1), st_point(3:2)) 168s > s = st_set_dimensions(s, 1, sfc) |> st_set_crs(4326) 168s > tm = as.POSIXct("2023-03-04 12:35") + c(0, 3600) 168s > s = st_set_dimensions(s, 2, tm) 168s > f = tempfile(fileext = ".nc") 168s > write_mdim(s, f, as_float = FALSE) 168s Warning messages: 168s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 168s GDAL Error 6: SetIndexingVariable() not implemented 168s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 168s GDAL Error 6: SetIndexingVariable() not implemented 168s > s2 = read_mdim(f) 168s > #print(s2) 168s > print(all.equal(s, s2, check.attributes = FALSE)) 168s [1] TRUE 168s > print(all.equal(s, s2)) 168s [1] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"input\": 1 string mismatch >" 168s [2] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"wkt\": 1 string mismatch >" 168s [3] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"input\": 1 string mismatch > >" 168s [4] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"wkt\": 1 string mismatch > >" 168s [5] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"offset\": 'tzone' attributes are inconsistent ('' and 'UTC') >" 168s [6] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 168s > 168s > st_crs(sfc) = st_crs(s2) 168s > st_crs(s) = st_crs(s2) 168s > tm = as.Date("2023-02-25") + 0:1 168s > sd = st_set_dimensions(s, 2, tm) 168s > print(sd) 168s stars object with 2 dimensions and 1 attribute 168s attribute(s): 168s Min. 1st Qu. Median Mean 3rd Qu. Max. 168s A1 1 1.75 2.5 2.5 3.25 4 168s dimension(s): 168s from to offset delta refsys point values 168s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 168s X2 1 2 2023-02-25 1 days Date FALSE NULL 168s > sd = st_set_dimensions(sd, 1, sfc) 168s > print(sd) 168s stars object with 2 dimensions and 1 attribute 168s attribute(s): 168s Min. 1st Qu. Median Mean 3rd Qu. Max. 168s A1 1 1.75 2.5 2.5 3.25 4 168s dimension(s): 168s from to offset delta refsys point values 168s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 168s X2 1 2 2023-02-25 1 days Date FALSE NULL 168s > f = tempfile(fileext = ".nc") 168s > write_mdim(sd, f) 168s Warning messages: 168s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 168s GDAL Error 6: SetIndexingVariable() not implemented 168s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 168s GDAL Error 6: SetIndexingVariable() not implemented 168s > sd2 = read_mdim(f) 168s > print(sd2) 168s stars object with 2 dimensions and 1 attribute 168s attribute(s): 168s Min. 1st Qu. Median Mean 3rd Qu. Max. 168s A1 1 1.75 2.5 2.5 3.25 4 168s dimension(s): 168s from to offset delta refsys point values 168s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 168s X2 1 2 2023-02-25 1 days Date NA NULL 168s > print(all.equal(sd, sd2, check.attributes = FALSE)) 168s [1] TRUE 168s > print(all.equal(sd, sd2)) 168s [1] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 168s > # if (.Platform$OS.type == "unix") { 168s > # print(read_mdim(paste0("/vsizip/", (system.file("zarr/sic_daily_sample.zarr.zip", package = "stars")))) 168s > # } 168s > 168s BEGIN TEST nc.R 168s 168s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 168s Copyright (C) 2025 The R Foundation for Statistical Computing 168s Platform: aarch64-unknown-linux-gnu 168s 168s R is free software and comes with ABSOLUTELY NO WARRANTY. 168s You are welcome to redistribute it under certain conditions. 168s Type 'license()' or 'licence()' for distribution details. 168s 168s R is a collaborative project with many contributors. 168s Type 'contributors()' for more information and 168s 'citation()' on how to cite R or R packages in publications. 168s 168s Type 'demo()' for some demos, 'help()' for on-line help, or 168s 'help.start()' for an HTML browser interface to help. 168s Type 'q()' to quit R. 168s 168s > # examples with the sf::nc polygon dataset NOT ABOUT NETCDF's, see e.g. stars.R netcdf.R 168s > suppressPackageStartupMessages(library(sf)) 169s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 169s > m = st_set_geometry(nc, NULL) 169s > n = as.matrix(m[c("BIR74", "SID74", "NWBIR74", "BIR79", "SID79", "NWBIR79")]) 169s > dim(n) = c(county = 100, var = 3, year = 2) 169s > dimnames(n) = list(county = nc$NAME, var = c("BIR", "SID", "NWBIR"), year = c(1974, 1979)) 169s > suppressPackageStartupMessages(library(stars)) 169s > (st = st_as_stars(pop = n)) 169s stars object with 3 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s pop 0 8 538 1657.032 1784 30757 169s dimension(s): 169s from to values 169s county 1 100 Ashe,...,Brunswick 169s var 1 3 BIR , SID , NWBIR 169s year 1 2 1974, 1979 169s > foo <- st %>% st_set_dimensions(1, st_geometry(nc)) # %>% st_set_dimensions(3, c(1974, 1979)) 169s > st %>% st_set_dimensions(1, st_geometry(nc)) %>% st_set_dimensions(names = c("geometries", "var", "year")) 169s stars object with 3 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s pop 0 8 538 1657.032 1784 30757 169s dimension(s): 169s from to refsys point 169s geometries 1 100 NAD27 FALSE 169s var 1 3 NA NA 169s year 1 2 NA NA 169s values 169s geometries MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s var BIR , SID , NWBIR 169s year 1974, 1979 169s > foo 169s stars object with 3 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s pop 0 8 538 1657.032 1784 30757 169s dimension(s): 169s from to refsys point 169s county 1 100 NAD27 FALSE 169s var 1 3 NA NA 169s year 1 2 NA NA 169s values 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s var BIR , SID , NWBIR 169s year 1974, 1979 169s > st_bbox(foo) 169s xmin ymin xmax ymax 169s -84.32385 33.88199 -75.45698 36.58965 169s > (x = st_as_sf(foo)) 169s Simple feature collection with 100 features and 6 fields 169s Geometry type: MULTIPOLYGON 169s Dimension: XY 169s Bounding box: xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965 169s Geodetic CRS: NAD27 169s First 10 features: 169s BIR.1974 SID.1974 NWBIR.1974 BIR.1979 SID.1979 NWBIR.1979 169s 1 1091 1 10 1364 0 19 169s 2 487 0 10 542 3 12 169s 3 3188 5 208 3616 6 260 169s 4 508 1 123 830 2 145 169s 5 1421 9 1066 1606 3 1197 169s 6 1452 7 954 1838 5 1237 169s 7 286 0 115 350 2 139 169s 8 420 0 254 594 2 371 169s 9 968 4 748 1190 2 844 169s 10 1612 1 160 2038 5 176 169s county 169s 1 MULTIPOLYGON (((-81.47276 3... 169s 2 MULTIPOLYGON (((-81.23989 3... 169s 3 MULTIPOLYGON (((-80.45634 3... 169s 4 MULTIPOLYGON (((-76.00897 3... 169s 5 MULTIPOLYGON (((-77.21767 3... 169s 6 MULTIPOLYGON (((-76.74506 3... 169s 7 MULTIPOLYGON (((-76.00897 3... 169s 8 MULTIPOLYGON (((-76.56251 3... 169s 9 MULTIPOLYGON (((-78.30876 3... 169s 10 MULTIPOLYGON (((-80.02567 3... 169s > frac = function(x) x[2] / x[1] 169s > frac2 = function(x) c(sidsr = x[2] / x[1], nwbr = x[3] / x[1]) 169s > frac2an = function(x) c(x[2] / x[1], x[3] / x[1]) 169s > st_apply(foo, c(1,3), frac) 169s stars object with 2 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s frac 0 0.001197874 0.001930504 0.002042241 0.002599348 0.00955414 169s dimension(s): 169s from to refsys point 169s county 1 100 NAD27 FALSE 169s year 1 2 NA NA 169s values 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s year 1974, 1979 169s > st_apply(foo, c(1,3), frac2) 169s stars object with 3 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 169s dimension(s): 169s from to refsys point 169s frac2 1 2 NA NA 169s county 1 100 NAD27 FALSE 169s year 1 2 NA NA 169s values 169s frac2 sidsr, nwbr 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s year 1974, 1979 169s > st_apply(foo, c(1,3), frac2an) 169s stars object with 3 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 169s dimension(s): 169s from to refsys point 169s frac2an 1 2 NA NA 169s county 1 100 NAD27 FALSE 169s year 1 2 NA NA 169s values 169s frac2an NULL 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s year 1974, 1979 169s > library(abind) 169s > (x = aperm(st_apply(foo, c(1,3), frac2), c(2,3,1))) 169s stars object with 3 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 169s dimension(s): 169s from to refsys point 169s county 1 100 NAD27 FALSE 169s year 1 2 NA NA 169s frac2 1 2 NA NA 169s values 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s year 1974, 1979 169s frac2 sidsr, nwbr 169s > y = aperm(st_apply(foo, c(1,3), frac2), c("county","year","frac2")) 169s > all.equal(st_dimensions(x), st_dimensions(y)) 169s [1] TRUE 169s > 169s > split(foo, 2) 169s stars object with 2 dimensions and 3 attributes 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s BIR 248 1176.75 2265 3761.770 4450.75 30757 169s SID 0 2.00 5 7.515 9.00 57 169s NWBIR 1 206.00 742 1201.810 1315.75 11631 169s dimension(s): 169s from to refsys point 169s county 1 100 NAD27 FALSE 169s year 1 2 NA NA 169s values 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s year 1974, 1979 169s > split(foo, 3) 169s stars object with 2 dimensions and 2 attributes 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s 1974 0 8 501.5 1452.367 1580.50 21588 169s 1979 0 9 614.0 1861.697 2040.25 30757 169s dimension(s): 169s from to refsys point 169s county 1 100 NAD27 FALSE 169s var 1 3 NA NA 169s values 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s var BIR , SID , NWBIR 169s > 169s > st_crs(foo) 169s Coordinate Reference System: 169s User input: NAD27 169s wkt: 169s GEOGCRS["NAD27", 169s DATUM["North American Datum 1927", 169s ELLIPSOID["Clarke 1866",6378206.4,294.978698213898, 169s LENGTHUNIT["metre",1]]], 169s PRIMEM["Greenwich",0, 169s ANGLEUNIT["degree",0.0174532925199433]], 169s CS[ellipsoidal,2], 169s AXIS["geodetic latitude (Lat)",north, 169s ORDER[1], 169s ANGLEUNIT["degree",0.0174532925199433]], 169s AXIS["geodetic longitude (Lon)",east, 169s ORDER[2], 169s ANGLEUNIT["degree",0.0174532925199433]], 169s USAGE[ 169s SCOPE["Geodesy."], 169s AREA["North and central America: Antigua and Barbuda - onshore. Bahamas - onshore plus offshore over internal continental shelf only. Belize - onshore. British Virgin Islands - onshore. Canada onshore - Alberta, British Columbia, Manitoba, New Brunswick, Newfoundland and Labrador, Northwest Territories, Nova Scotia, Nunavut, Ontario, Prince Edward Island, Quebec, Saskatchewan and Yukon - plus offshore east coast. Cuba - onshore and offshore. El Salvador - onshore. Guatemala - onshore. Honduras - onshore. Panama - onshore. Puerto Rico - onshore. Mexico - onshore plus offshore east coast. Nicaragua - onshore. United States (USA) onshore and offshore - Alabama, Alaska, Arizona, Arkansas, California, Colorado, Connecticut, Delaware, Florida, Georgia, Idaho, Illinois, Indiana, Iowa, Kansas, Kentucky, Louisiana, Maine, Maryland, Massachusetts, Michigan, Minnesota, Mississippi, Missouri, Montana, Nebraska, Nevada, New Hampshire, New Jersey, New Mexico, New York, North Carolina, North Dakota, Ohio, Oklahoma, Oregon, Pennsylvania, Rhode Island, South Carolina, South Dakota, Tennessee, Texas, Utah, Vermont, Virginia, Washington, West Virginia, Wisconsin and Wyoming - plus offshore . US Virgin Islands - onshore."], 169s BBOX[7.15,167.65,83.17,-47.74]], 169s ID["EPSG",4267]] 169s > plot(foo) 169s > 169s > # subset vector cube: 169s > foo[nc[1]] 169s stars object with 3 dimensions and 1 attribute 169s attribute(s): 169s Min. 1st Qu. Median Mean 3rd Qu. Max. 169s pop 0 8 538 1657.032 1784 30757 169s dimension(s): 169s from to refsys point 169s county 1 100 NAD27 FALSE 169s var 1 3 NA NA 169s year 1 2 NA NA 169s values 169s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 169s var BIR , SID , NWBIR 169s year 1974, 1979 169s > 169s BEGIN TEST plot.R 169s 169s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 169s Copyright (C) 2025 The R Foundation for Statistical Computing 169s Platform: aarch64-unknown-linux-gnu 169s 169s R is free software and comes with ABSOLUTELY NO WARRANTY. 169s You are welcome to redistribute it under certain conditions. 169s Type 'license()' or 'licence()' for distribution details. 169s 169s R is a collaborative project with many contributors. 169s Type 'contributors()' for more information and 169s 'citation()' on how to cite R or R packages in publications. 169s 169s Type 'demo()' for some demos, 'help()' for on-line help, or 169s 'help.start()' for an HTML browser interface to help. 169s Type 'q()' to quit R. 169s 170s > suppressPackageStartupMessages(library(stars)) 170s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 170s + data(air) # this loads several datasets in .GlobalEnv 170s + dim(air) 170s + d = st_dimensions(station = st_as_sfc(stations), time = dates) 170s + aq = st_as_stars(list(PM10 = air), dimensions = d) 170s + image(aperm(log(aq), 2:1), main = "NA pattern (white) in PM10 station time series") 170s + st_geometry(aq) 170s + } 171s Geometry set for 70 features 171s Geometry type: POINT 171s Dimension: XY 171s Bounding box: xmin: 6.28107 ymin: 47.80847 xmax: 14.78617 ymax: 54.92497 171s Geodetic CRS: +proj=longlat +datum=WGS84 +no_defs 171s First 5 geometries: 171s > 171s > csv = system.file("tif/ESACCI-LC-Legend.csv", package = "starsdata") 171s > if (csv != "") { 171s + rgb = read.csv(csv, header = TRUE, sep = ";") 171s POINT (9.585911 53.67057) 171s POINT (9.68503 53.52418) 171s POINT (9.791584 54.07312) 171s POINT (13.64701 52.44775) 171s POINT (13.29635 52.65315) 171s + luc = read_stars(system.file("tif/LUC3.tif", package = "starsdata")) 171s + plot(luc, rgb = rgb, axes = TRUE, key.pos = NULL) 171s + } 171s > 171s > # https://github.com/r-spatial/stars/issues/233 : 171s > nc = read_sf(system.file("shape/nc.shp", package = "sf")) 171s > output = st_as_stars(st_bbox(nc), nx = 1, ny = 1, values = 1) 171s > plot(output) 171s > 171s Warning message: 171s In plot.stars(output) : 171s breaks="quantile" leads to a single class; maybe try breaks="equal" instead? 171s BEGIN TEST predict.R 171s 171s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 171s Copyright (C) 2025 The R Foundation for Statistical Computing 171s Platform: aarch64-unknown-linux-gnu 171s 171s R is free software and comes with ABSOLUTELY NO WARRANTY. 171s You are welcome to redistribute it under certain conditions. 171s Type 'license()' or 'licence()' for distribution details. 171s 171s R is a collaborative project with many contributors. 171s Type 'contributors()' for more information and 171s 'citation()' on how to cite R or R packages in publications. 171s 171s Type 'demo()' for some demos, 'help()' for on-line help, or 171s 'help.start()' for an HTML browser interface to help. 171s Type 'q()' to quit R. 171s 171s > suppressPackageStartupMessages(library(stars)) 172s > # predict: 172s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 172s > (x = read_stars(tif)) 172s stars object with 3 dimensions and 1 attribute 172s attribute(s): 172s Min. 1st Qu. Median Mean 3rd Qu. Max. 172s L7_ETMs.tif 1 54 69 68.91242 86 255 172s dimension(s): 172s from to offset delta refsys point x/y 172s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 172s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 172s band 1 6 NA NA NA NA 172s > st_crs(x) = st_crs(x) # cleans trailing space 172s > model = lm(x~L7_ETMs.tif, head(as.data.frame(x), 50)) 172s > x = predict(x, model) 173s > 173s > (y = read_stars(tif, proxy = TRUE)) 173s stars_proxy object with 1 attribute in 1 file(s): 173s $L7_ETMs.tif 173s [1] "[...]/L7_ETMs.tif" 173s 173s dimension(s): 173s from to offset delta refsys point x/y 173s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 173s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 173s band 1 6 NA NA NA NA 173s > (yp = predict(y, model)) 173s stars_proxy object with 1 attribute in 1 file(s): 173s $L7_ETMs.tif 173s [1] "[...]/L7_ETMs.tif" 173s 173s dimension(s): 173s from to offset delta refsys point x/y 173s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 173s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 173s band 1 6 NA NA NA NA 173s call_list: 173s [[1]] 173s predict(object = object, model = model) 173s attr(,".Environment") 173s 173s 173s This object has pending lazy operations: dimensions as printed may not reflect this. 173s > all.equal(x, st_as_stars(yp)) 174s [1] TRUE 174s > 174s > yy = st_set_dimensions(y, 3, values = paste0("band", 1:6)) 174s > (y_spl = split(yy, 3)) 174s stars_proxy object with 1 attribute in 1 file(s): 174s $L7_ETMs.tif 174s [1] "[...]/L7_ETMs.tif" 174s 174s dimension(s): 174s from to offset delta refsys point values 174s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 174s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 174s band 1 6 NA NA NA NA band1,...,band6 174s x/y 174s x [x] 174s y [y] 174s band 174s call_list: 174s [[1]] 174s split(x = x, 3) 174s attr(,".Environment") 174s 174s 174s This object has pending lazy operations: dimensions as printed may not reflect this. 174s > as.data.frame(st_as_stars(split(yy, 3)))[1:3,] 174s x y band1 band2 band3 band4 band5 band6 174s 1 288790.5 9120747 69 56 46 79 86 46 174s 2 288819.0 9120747 69 57 49 75 88 49 174s 3 288847.5 9120747 63 52 45 66 75 41 174s > 174s BEGIN TEST proxy.R 174s 174s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 174s Copyright (C) 2025 The R Foundation for Statistical Computing 174s Platform: aarch64-unknown-linux-gnu 174s 174s R is free software and comes with ABSOLUTELY NO WARRANTY. 174s You are welcome to redistribute it under certain conditions. 174s Type 'license()' or 'licence()' for distribution details. 174s 174s R is a collaborative project with many contributors. 174s Type 'contributors()' for more information and 174s 'citation()' on how to cite R or R packages in publications. 174s 174s Type 'demo()' for some demos, 'help()' for on-line help, or 174s 'help.start()' for an HTML browser interface to help. 174s Type 'q()' to quit R. 174s 174s > Sys.setenv(TZ="UTC") 174s > suppressPackageStartupMessages(library(sf)) 175s > suppressPackageStartupMessages(library(stars)) 175s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 175s > (r = read_stars(tif, proxy = TRUE)) 175s stars_proxy object with 1 attribute in 1 file(s): 175s $L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" 175s 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 1 6 NA NA NA NA 175s > if (interactive()) { 175s + plot(r) 175s + } 175s > dim(r) 175s x y band 175s 349 352 6 175s > r[,,,2:3] 175s stars_proxy object with 1 attribute in 1 file(s): 175s $L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" 175s 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 2 3 NA NA NA NA 175s > r+r 175s stars_proxy object with 1 attribute in 1 file(s): 175s $L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" 175s 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 1 6 NA NA NA NA 175s call_list: 175s [[1]] 175s e1 + e2 175s attr(,".Environment") 175s 175s 175s This object has pending lazy operations: dimensions as printed may not reflect this. 175s > st_as_stars(sin(r), downsample = 2) 175s stars object with 3 dimensions and 1 attribute 175s attribute(s): 175s Min. 1st Qu. Median Mean 3rd Qu. Max. 175s L7_ETMs.tif -0.9999902 -0.676772 0.0353983 0.01655317 0.7210377 0.9999119 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 117 288776 85.01 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 118 9120761 -85.02 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 1 6 NA NA NA NA 175s > aperm(r, c(3,2,1)) 175s stars_proxy object with 1 attribute in 1 file(s): 175s $L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" 175s 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 1 6 NA NA NA NA 175s call_list: 175s [[1]] 175s aperm(a = a, perm = perm) 175s attr(,".Environment") 175s 175s 175s This object has pending lazy operations: dimensions as printed may not reflect this. 175s > if (interactive()) { 175s + plot(r) 175s + } 175s > (xx = c(r,r)) 175s stars_proxy object with 2 attributes in 2 file(s): 175s $L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" 175s 175s $L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" 175s 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 1 6 NA NA NA NA 175s > st_redimension(xx) 175s stars_proxy object with 1 attribute in 2 file(s): 175s $L7_ETMs.tif.L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 175s 175s dimension(s): 175s from to offset delta refsys point 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 175s band 1 6 NA NA NA NA 175s new_dim 1 2 NA NA NA NA 175s values x/y 175s x NULL [x] 175s y NULL [y] 175s band NULL 175s new_dim L7_ETMs.tif, L7_ETMs.tif 175s > st_as_stars(r) 175s stars object with 3 dimensions and 1 attribute 175s attribute(s): 175s Min. 1st Qu. Median Mean 3rd Qu. Max. 175s L7_ETMs.tif 1 54 69 68.91242 86 255 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 1 6 NA NA NA NA 175s > (y = st_apply(r, 1:2, max)) 175s stars_proxy object with 1 attribute in 1 file(s): 175s $L7_ETMs.tif 175s [1] "[...]/L7_ETMs.tif" 175s 175s dimension(s): 175s from to offset delta refsys point x/y 175s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 175s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 175s band 1 6 NA NA NA NA 175s call_list: 175s [[1]] 175s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 175s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 175s attr(,".Environment") 175s 175s 175s This object has pending lazy operations: dimensions as printed may not reflect this. 175s > (yy = st_as_stars(y, downsample = 1)) 175s stars object with 2 dimensions and 1 attribute 175s attribute(s): 175s Min. 1st Qu. Median Mean 3rd Qu. Max. 175s max 55 85 96 99.38568 113 255 175s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s > (y = adrop(st_apply(r, c("x", "y"), max))) 176s stars_proxy object with 1 attribute in 1 file(s): 176s $L7_ETMs.tif 176s [1] "[...]/L7_ETMs.tif" 176s 176s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s band 1 6 NA NA NA NA 176s call_list: 176s [[1]] 176s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 176s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 176s attr(,".Environment") 176s 176s 176s [[2]] 176s adrop(x = x, drop = drop) 176s attr(,".Environment") 176s 176s 176s This object has pending lazy operations: dimensions as printed may not reflect this. 176s > (yy = st_as_stars(y, downsample = 1)) 176s stars object with 2 dimensions and 1 attribute 176s attribute(s): 176s Min. 1st Qu. Median Mean 3rd Qu. Max. 176s max 55 85 96 99.38568 113 255 176s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s > plot(yy) 176s > (y = adrop(st_apply(r, c("x", "band"), max))) 176s stars_proxy object with 1 attribute in 1 file(s): 176s $L7_ETMs.tif 176s [1] "[...]/L7_ETMs.tif" 176s 176s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s band 1 6 NA NA NA NA 176s call_list: 176s [[1]] 176s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 176s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 176s attr(,".Environment") 176s 176s 176s [[2]] 176s adrop(x = x, drop = drop) 176s attr(,".Environment") 176s 176s 176s This object has pending lazy operations: dimensions as printed may not reflect this. 176s > (yy = st_as_stars(y, downsample = 1)) 176s stars object with 2 dimensions and 1 attribute 176s attribute(s): 176s Min. 1st Qu. Median Mean 3rd Qu. Max. 176s max 77 111 133 137.8505 157 255 176s dimension(s): 176s Warning message: 176s In FUN(X[[i]], ...) : 176s st_apply on x/y dimensions applied to downsampled image(s) 176s from to offset delta refsys point 176s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE 176s band 1 6 NA NA NA NA 176s > rm(yy) 176s > 176s > (xx = c(r,r)) 176s stars_proxy object with 2 attributes in 2 file(s): 176s $L7_ETMs.tif 176s [1] "[...]/L7_ETMs.tif" 176s 176s $L7_ETMs.tif 176s [1] "[...]/L7_ETMs.tif" 176s 176s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s band 1 6 NA NA NA NA 176s > names(xx) = c("a", "b") 176s > xx["a"] 176s stars_proxy object with 1 attribute in 1 file(s): 176s $a 176s [1] "[...]/L7_ETMs.tif" 176s 176s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s band 1 6 NA NA NA NA 176s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 176s > buf = st_buffer(st_sfc(pt, crs = st_crs(r)), 1500) 176s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 176s + crs = st_crs(r)) 176s > r = r[buf] # crops 176s > r = r[buf, epsilon = 1e-5] # crops with shrinked bounding box 176s > 176s > # c: 176s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 176s > if (FALSE && f != "") { 176s + files = c("avhrr-only-v2.19810901.nc", 176s + "avhrr-only-v2.19810902.nc", 176s + "avhrr-only-v2.19810903.nc", 176s + "avhrr-only-v2.19810904.nc", 176s + "avhrr-only-v2.19810905.nc", 176s + "avhrr-only-v2.19810906.nc", 176s + "avhrr-only-v2.19810907.nc", 176s + "avhrr-only-v2.19810908.nc", 176s + "avhrr-only-v2.19810909.nc") 176s + l = list() 176s + for (f in files) { 176s + from = system.file(paste0("netcdf/", f), package = "starsdata") 176s + l[[f]] = read_stars(from, sub = c("sst", "anom"), proxy = TRUE) 176s + } 176s + ret = do.call(c, l) 176s + print(ret) 176s + all = system.file(paste0("netcdf/", files), package = "starsdata") 176s + ret = read_stars(all, sub = c("sst", "anom")) 176s + print(ret) 176s + print(st_redimension(ret)) # collapse the two attributes into new dimension 176s + 176s + try(ret <- c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 176s + #print(ret) 176s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 176s + #print(ret) 176s + ret <- st_redimension(l[[1]], along = list(times = as.Date("1981-09-01") + 0:1)) 176s + print(ret) 176s + } 176s > 176s > # demonstrate that environments work: 176s > x = read_stars(tif, proxy = TRUE) 176s > f = function(x) { 176s + g = function(xx) { 176s + ndvi = function(z1, z2, z3, z4, z5, z6) (z2-z1)/(z2+z1) 176s + st_apply(xx, 1:2, ndvi) 176s + } 176s + g(x) 176s + } 176s > (x = f(x)) 176s stars_proxy object with 1 attribute in 1 file(s): 176s $L7_ETMs.tif 176s [1] "[...]/L7_ETMs.tif" 176s 176s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s band 1 6 NA NA NA NA 176s call_list: 176s [[1]] 176s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 176s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 176s attr(,".Environment") 176s 176s 176s This object has pending lazy operations: dimensions as printed may not reflect this. 176s > st_as_stars(x) 176s stars object with 2 dimensions and 1 attribute 176s attribute(s): 176s Min. 1st Qu. Median Mean 3rd Qu. Max. 176s ndvi -0.2828283 -0.1081081 -0.08287293 -0.08464615 -0.05882353 0.09259259 176s dimension(s): 176s from to offset delta refsys point x/y 176s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 176s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 176s > 176s BEGIN TEST raster.R 176s 176s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 176s Copyright (C) 2025 The R Foundation for Statistical Computing 176s Platform: aarch64-unknown-linux-gnu 176s 176s R is free software and comes with ABSOLUTELY NO WARRANTY. 176s You are welcome to redistribute it under certain conditions. 176s Type 'license()' or 'licence()' for distribution details. 176s 176s R is a collaborative project with many contributors. 176s Type 'contributors()' for more information and 176s 'citation()' on how to cite R or R packages in publications. 176s 176s Type 'demo()' for some demos, 'help()' for on-line help, or 176s 'help.start()' for an HTML browser interface to help. 176s Type 'q()' to quit R. 176s 176s > options(rgdal_show_exportToProj4_warnings = "none") 176s > suppressPackageStartupMessages(library(stars)) 177s > 177s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require("raster", quietly = TRUE) && 177s + suppressPackageStartupMessages(require("terra", quietly = TRUE))) { 177s + 177s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 177s + (x = read_stars(tif)) 177s + (r = as(x, "Raster")) 177s + (y = st_as_stars(r)) 177s + 177s + # single band: 177s + x = adrop(x[,,,1]) 177s + r = as(x, "Raster") 177s + (y = st_as_stars(r)) 177s + 177s + # proxy: 177s + (x = read_stars(tif, proxy = TRUE)) 177s + (r = as(x, "Raster")) 177s + (y = st_as_stars(r)) 177s + (y2 = st_as_stars(r, proxy = TRUE)) 177s + } 182s stars_proxy object with 1 attribute in 1 file(s): 182s $L7_ETMs.tif 182s [1] "[...]/L7_ETMs.tif" 182s 182s dimension(s): 182s from to offset delta refsys point x/y 182s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 182s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 182s band 1 6 NA NA NA NA 182s > 182s > if (require(terra, quietly = TRUE)) { 182s + ## terra ------------- 182s + stopifnot(require(terra)) 182s + (x = read_stars(tif)) 182s + (r = as(x, "SpatRaster")) 182s + (y = st_as_stars(r)) 182s + 182s + # single band: 182s + x = adrop(x[,,,1]) 182s + r = as(x, "SpatRaster") 182s + (y = st_as_stars(r)) 182s + 182s + # proxy: 182s + (x = read_stars(tif, proxy = TRUE)) 182s + (r = as(x, "SpatRaster")) 182s + (y = st_as_stars(r)) 182s + (y2 = st_as_stars(r, proxy = TRUE)) 182s + 182s + f = system.file("tif/lc.tif", package = "stars") 182s + lc = read_stars(system.file("tif/lc.tif", package = "stars")) 182s + levels(lc[[1]]) 182s + r = rast(lc) 182s + e = attr(lc[[1]], "exclude") 182s + 182s + if (packageVersion("terra") >= "1.5.48") { 182s + 182s + print(all.equal(terra::levels(r)[[1]][,2], terra::levels(rast(f))[[1]][!e,2])) 182s + print(all.equal(terra::coltab(r)[[1]][!e,], terra::coltab(rast(f))[[1]][!e,], check.attributes = FALSE)) 182s + 182s + r<- rast(nrow=10, ncol=10) 182s + set.seed(5) 182s + values(r)<- sample(1:3, size = ncell(r), replace = TRUE) 182s + levels(r) <- data.frame(ID=1:3, category = c("c1", "c2", "c3")) 182s + 182s + r2<- rast(nrow=10, ncol=10) 182s + set.seed(6) 182s + values(r2)<- sample(c(0,2,3), size = ncell(r2), replace = TRUE) 182s + levels(r2) <- data.frame(ID=c(0,2,3), category = c("x1", "x2", "x3")) 182s + 182s + r3<- c(r,r2) 182s + names(r3)<- c("lyr.1", "lyr.2") 182s + 182s + r3_stars<- st_as_stars(r3) 182s + 182s + st_redimension(r3_stars) |> print() 182s + rast(r3_stars) |> levels() |> print() 182s + 182s + m = matrix(1:121, 11, 11) 182s + bb = st_bbox(c(xmin=0, xmax=11, ymin=0, ymax=11)) 182s + s = st_as_stars(bb, values = m) 182s + r = rast(s) 182s + aggregate(r, 2) |> st_as_stars() -> r.s 182s + stopifnot(isTRUE(all.equal(r.s[,1:5,1:5], st_downsample(s, 1, FUN = mean)))) 182s + } 182s + } 182s [1] TRUE 182s [1] TRUE 182s stars object with 3 dimensions and 1 attribute 182s attribute(s): 182s lyr.1.lyr.2 182s c1:34 182s c2:32 182s c3:34 182s x1:28 182s x2:37 182s x3:35 182s dimension(s): 182s from to offset delta refsys values x/y 182s x 1 10 -180 36 WGS 84 (CRS84) NULL [x] 182s y 1 10 90 -18 WGS 84 (CRS84) NULL [y] 182s new_dim 1 2 NA NA NA lyr.1, lyr.2 183s [[1]] 183s IDs categories 183s 1 1 c1 183s 2 2 c2 183s 3 3 c3 183s 183s [[2]] 183s IDs categories 183s 1 0 x1 183s 2 2 x2 183s 3 3 x3 183s 183s > 183s > 183s BEGIN TEST rasterize.R 183s 183s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 183s Copyright (C) 2025 The R Foundation for Statistical Computing 183s Platform: aarch64-unknown-linux-gnu 183s 183s R is free software and comes with ABSOLUTELY NO WARRANTY. 183s You are welcome to redistribute it under certain conditions. 183s Type 'license()' or 'licence()' for distribution details. 183s 183s R is a collaborative project with many contributors. 183s Type 'contributors()' for more information and 183s 'citation()' on how to cite R or R packages in publications. 183s 183s Type 'demo()' for some demos, 'help()' for on-line help, or 183s 'help.start()' for an HTML browser interface to help. 183s Type 'q()' to quit R. 183s 183s > suppressPackageStartupMessages(library(stars)) 183s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 184s > (x = st_rasterize(nc)) # default grid: 184s stars object with 2 dimensions and 12 attributes 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 184s AREA 0.042 0.108 0.142 1.451932e-01 0.181 0.241 30904 184s PERIMETER 0.999 1.461 1.716 1.786110e+00 2.004 3.640 30904 184s CNTY_ 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 184s CNTY_ID 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 184s FIPSNO 37001.000 37049.000 37101.000 3.710042e+04 37153.000 37199.000 30904 184s CRESS_ID 1.000 25.000 51.000 5.071206e+01 77.000 100.000 30904 184s BIR74 248.000 1323.000 2648.000 3.791637e+03 4139.000 21588.000 30904 184s SID74 0.000 3.000 5.000 7.891985e+00 10.000 44.000 30904 184s NWBIR74 1.000 297.000 844.000 1.246210e+03 1396.000 8027.000 30904 184s BIR79 319.000 1606.000 3108.000 4.852046e+03 5400.000 30757.000 30904 184s SID79 0.000 3.000 6.000 9.584098e+00 13.000 57.000 30904 184s NWBIR79 3.000 360.000 1058.000 1.604642e+03 1524.000 11631.000 30904 184s dimension(s): 184s from to offset delta refsys point x/y 184s x 1 461 -84.32 0.01925 NAD27 FALSE [x] 184s y 1 141 36.59 -0.01925 NAD27 FALSE [y] 184s > plot(x, axes = TRUE) 184s > # a bit more customized grid: 184s > (x = st_rasterize(nc, st_as_stars(st_bbox(nc), nx = 100, ny = 50, values = NA_real_))) 184s stars object with 2 dimensions and 12 attributes 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 184s AREA 0.042 0.108 0.142 0.145536 0.181 0.241 2373 184s PERIMETER 0.999 1.470 1.716 1.789032 2.004 3.640 2373 184s CNTY_ 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 184s CNTY_ID 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 184s FIPSNO 37001.000 37049.000 37101.000 37100.327750 37151.000 37199.000 2373 184s CRESS_ID 1.000 25.000 51.000 50.663875 76.000 100.000 2373 184s BIR74 248.000 1323.500 2648.000 3790.530263 4139.000 21588.000 2373 184s SID74 0.000 3.000 5.000 7.905976 10.000 44.000 2373 184s NWBIR74 1.000 289.000 844.000 1246.116483 1396.000 8027.000 2373 184s BIR79 319.000 1606.000 3108.000 4848.231062 5386.000 30757.000 2373 184s SID79 0.000 3.000 6.000 9.574419 13.000 57.000 2373 184s NWBIR79 3.000 360.000 1058.000 1602.740769 1524.000 11631.000 2373 184s dimension(s): 184s from to offset delta refsys point x/y 184s x 1 100 -84.32 0.08867 NAD27 FALSE [x] 184s y 1 50 36.59 -0.05415 NAD27 FALSE [y] 184s > plot(x, axes = TRUE) 184s > (ls = st_sf(a = 1:2, st_sfc(st_linestring(rbind(c(0.1, 0), c(1.1, 1))), st_linestring(rbind(c(0, 0.05), c(1, 0.05)))))) 184s Simple feature collection with 2 features and 1 field 184s Geometry type: LINESTRING 184s Dimension: XY 184s Bounding box: xmin: 0 ymin: 0 xmax: 1.1 ymax: 1 184s CRS: NA 184s a 184s 1 1 184s 2 2 184s c..st_sfc.st_linestring.rbind.c.0.1..0...c.1.1..1.....st_linestring.rbind.c.0..........0.05...c.1..0.05...... 184s 1 LINESTRING (0.1 0, 1.1 1) 184s 2 LINESTRING (0 0.05, 1 0.05) 184s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = NA_real_)) 184s stars object with 2 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 184s values NA NA NA NaN NA NA 100 184s dimension(s): 184s from to offset delta x/y 184s x 1 10 0 0.1 [x] 184s y 1 10 1 -0.1 [y] 184s > # the following two plots confirm that (only) the 184s > # upper-left corner is part of the grid cell (when dy is negative), leading 184s > # to a seemingly half-gridcell-shift problem: 184s > ## sf_extSoftVersion()["GDAL"] 184s > plot(st_rasterize(ls, grd), axes = TRUE, reset = FALSE) # ALL_TOUCHED=FALSE; 184s > plot(ls, add = TRUE, col = "red") 184s > plot(st_rasterize(ls, grd, options = "ALL_TOUCHED=TRUE"), axes = TRUE, reset = FALSE) 184s > plot(ls, add = TRUE, col = "red") 184s > # add lines to existing 0 values, summing values in case of multiple lines: 184s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = 0)) 184s stars object with 2 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s values 0 0 0 0 0 0 184s dimension(s): 184s from to offset delta x/y 184s x 1 10 0 0.1 [x] 184s y 1 10 1 -0.1 [y] 184s > r = st_rasterize(ls, grd, options = c("MERGE_ALG=ADD", "ALL_TOUCHED=TRUE")) 184s > plot(r, axes = TRUE, reset = FALSE) 184s > plot(ls, add = TRUE, col = "red") 184s > 184s BEGIN TEST rectilinear.R 184s 184s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 184s Copyright (C) 2025 The R Foundation for Statistical Computing 184s Platform: aarch64-unknown-linux-gnu 184s 184s R is free software and comes with ABSOLUTELY NO WARRANTY. 184s You are welcome to redistribute it under certain conditions. 184s Type 'license()' or 'licence()' for distribution details. 184s 184s R is a collaborative project with many contributors. 184s Type 'contributors()' for more information and 184s 'citation()' on how to cite R or R packages in publications. 184s 184s Type 'demo()' for some demos, 'help()' for on-line help, or 184s 'help.start()' for an HTML browser interface to help. 184s Type 'q()' to quit R. 184s 185s > suppressPackageStartupMessages(library(stars)) 185s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 185s > x = read_stars(tif) 185s > (xx = x[,c(1:347,349),c(1:350,352),]) # rectilinear: one-but-last row & col missing 185s stars object with 3 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s L7_ETMs.tif 1 54 69 68.9915 86 255 185s dimension(s): 185s from to refsys point 185s x 1 348 SIRGAS 2000 / UTM zone 25S FALSE 185s y 1 351 SIRGAS 2000 / UTM zone 25S FALSE 185s band 1 6 NA NA 185s values x/y 185s x [288790.5,288819),...,[298708.5,298737) [x] 185s y [9120747,9120718),...,[9110743,9110715) [y] 185s band NULL 185s > image(xx) # chooses useRaster itself 185s > # see also tidy.R for a ggplot example, leaving out the row. 185s > 185s > m = matrix(1:16, 4, 4) 185s > x = 1:4 185s > y = 2:5 185s > (st = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 185s stars object with 2 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s m 1 4.75 8.5 8.5 12.25 16 185s dimension(s): 185s Error in st_set_dimensions(st, 2, values = c(2, 3, 4, 5, 8, 20)) : 185s length of values ( 6 ) does not match length of dimension 2 ( 4 ) 185s from to offset delta point x/y 185s x 1 4 1 1 FALSE [x] 185s y 1 4 2 1 FALSE [y] 185s > st = st_set_dimensions(st, 1, values = c(1,2,3,4,6)) 185s > st = st_set_dimensions(st, 2, values = c(2,3,4,5,8)) 185s > try(st_set_dimensions(st, 2, values = c(2,3,4,5,8,20))) # one too many 185s > 185s > # $<-.stars: 185s > st$foo = st$m * 2 185s > st 185s stars object with 2 dimensions and 2 attributes 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s m 1 4.75 8.5 8.5 12.25 16 185s foo 2 9.50 17.0 17.0 24.50 32 185s dimension(s): 185s from to point values x/y 185s x 1 4 FALSE [1,2),...,[4,6) [x] 185s y 1 4 FALSE [2,3),...,[5,8) [y] 185s > 185s > # st_as_sf: 185s > 185s > if (utils::packageVersion("sf") > "0.7.2") { 185s + plot(st_as_sf(st, as_points = FALSE), axes = TRUE) 185s + } 186s > 186s > image(st, text_values = TRUE, axes = TRUE) 186s > 186s BEGIN TEST redimension.R 186s 186s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 186s Copyright (C) 2025 The R Foundation for Statistical Computing 186s Platform: aarch64-unknown-linux-gnu 186s 186s R is free software and comes with ABSOLUTELY NO WARRANTY. 186s You are welcome to redistribute it under certain conditions. 186s Type 'license()' or 'licence()' for distribution details. 186s 186s R is a collaborative project with many contributors. 186s Type 'contributors()' for more information and 186s 'citation()' on how to cite R or R packages in publications. 186s 186s Type 'demo()' for some demos, 'help()' for on-line help, or 186s 'help.start()' for an HTML browser interface to help. 186s Type 'q()' to quit R. 186s 186s > suppressPackageStartupMessages(library(stars)) 186s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 186s > r = read_stars(list(a = c(tif,tif), b = c(tif, tif)), proxy = TRUE) 186s > (xx = st_redimension(r, along = list(foo = 1:4))) 186s stars_proxy object with 1 attribute in 4 file(s): 186s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 186s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 186s [4] "[...]/L7_ETMs.tif" 186s 186s dimension(s): 186s from to offset delta refsys point x/y 186s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 186s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 186s band 1 6 NA NA NA NA 186s foo 1 4 1 1 NA NA 186s > (rr = c(xx, xx)) 186s stars_proxy object with 2 attributes in 8 file(s): 186s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 186s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 186s [4] "[...]/L7_ETMs.tif" 186s 186s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 186s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 186s [4] "[...]/L7_ETMs.tif" 186s 186s dimension(s): 186s from to offset delta refsys point x/y 186s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 186s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 186s band 1 6 NA NA NA NA 186s foo 1 4 1 1 NA NA 186s > # st_as_stars(rr) 186s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 186s stars_proxy object with 1 attribute in 8 file(s): 186s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif.a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 186s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 186s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 186s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 186s 186s dimension(s): 187s from to offset delta refsys point x/y 187s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 187s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 187s band 1 6 NA NA NA NA 187s foo 1 4 1 1 NA NA 187s bar 1 2 2001-01-01 365 days Date NA 187s > (rr = c(a = xx, b = xx)) 187s stars_proxy object with 2 attributes in 8 file(s): 187s $a 187s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 187s [4] "[...]/L7_ETMs.tif" 187s 187s $b 187s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 187s [4] "[...]/L7_ETMs.tif" 187s 187s dimension(s): 187s from to offset delta refsys point x/y 187s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 187s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 187s band 1 6 NA NA NA NA 187s foo 1 4 1 1 NA NA 187s > # st_as_stars(rr) 187s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 187s stars_proxy object with 1 attribute in 8 file(s): 187s $a.b 187s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 187s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 187s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 187s 187s dimension(s): 187s from to offset delta refsys point x/y 187s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 187s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 187s band 1 6 NA NA NA NA 187s foo 1 4 1 1 NA NA 187s bar 1 2 2001-01-01 365 days Date NA 187s > 187s BEGIN TEST sf.R 187s 187s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 187s Copyright (C) 2025 The R Foundation for Statistical Computing 187s Platform: aarch64-unknown-linux-gnu 187s 187s R is free software and comes with ABSOLUTELY NO WARRANTY. 187s You are welcome to redistribute it under certain conditions. 187s Type 'license()' or 'licence()' for distribution details. 187s 187s R is a collaborative project with many contributors. 187s Type 'contributors()' for more information and 187s 'citation()' on how to cite R or R packages in publications. 187s 187s Type 'demo()' for some demos, 'help()' for on-line help, or 187s 'help.start()' for an HTML browser interface to help. 187s Type 'q()' to quit R. 187s 187s > suppressPackageStartupMessages(library(stars)) 187s > library(sf) 187s > #jp2 = system.file("jp2/B01.jp2", package = "stars") 187s > #(x = read_stars(jp2, options = c("OVERVIEW_LEVEL=3"))) 187s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 187s > #(x = read_stars(tif, options = c("OVERVIEW_LEVEL=3"))) # FIXME: breaks on windows 187s > (x = read_stars(tif)[,1:20,1:20]) 187s stars object with 3 dimensions and 1 attribute 187s attribute(s): 187s Min. 1st Qu. Median Mean 3rd Qu. Max. 187s L7_ETMs.tif 17 44 58 58.19667 70 130 187s dimension(s): 187s from to offset delta refsys point x/y 187s x 1 20 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 187s y 1 20 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 187s band 1 6 NA NA NA NA 187s > # names(x) = "L7_ETM" 187s > 187s > # library(abind) 187s > # x = adrop(x) 187s > image(x) 187s > (sfc = st_as_sfc(x, as_points = FALSE)) 187s Geometry set for 400 features 187s Geometry type: POLYGON 187s Dimension: XY 187s Bounding box: xmin: 288776.3 ymin: 9120191 xmax: 289346.3 ymax: 9120761 188s Projected CRS: SIRGAS 2000 / UTM zone 25S 188s First 5 geometries: 188s POLYGON ((288776.3 9120761, 288804.8 9120761, 2... 188s POLYGON ((288804.8 9120761, 288833.3 9120761, 2... 188s POLYGON ((288833.3 9120761, 288861.8 9120761, 2... 188s POLYGON ((288861.8 9120761, 288890.3 9120761, 2... 188s POLYGON ((288890.3 9120761, 288918.8 9120761, 2... 188s > plot(sfc, add =TRUE) 188s > (sfc = st_as_sfc(x, as_points = TRUE)) 188s Geometry set for 400 features 188s Geometry type: POINT 188s Dimension: XY 188s Bounding box: xmin: 288790.5 ymin: 9120205 xmax: 289332 ymax: 9120747 188s Projected CRS: SIRGAS 2000 / UTM zone 25S 188s First 5 geometries: 188s POINT (288790.5 9120747) 188s POINT (288819 9120747) 188s POINT (288847.5 9120747) 188s POINT (288876 9120747) 188s POINT (288904.5 9120747) 188s > plot(sfc, add = TRUE) 188s > 188s > sf = st_as_sf(x, as_points = FALSE) 188s > plot(sf, border = NA) 188s > sf = st_as_sf(x[,,,1], as_points = FALSE, merge = TRUE) 188s Warning message: 188s In CPL_polygonize(file, mask_name, "GTiff", "Memory", "foo", options, : 188s GDAL Message 1: DeprecationWarning: 'Memory' driver is deprecated since GDAL 3.11. Use 'MEM' onwards. Further messages of this type will be suppressed. 188s > plot(sf, border = NA) 188s > 188s > sfc1 <- st_as_sfc(x, as_points = TRUE, use_cpp = TRUE, na.rm = FALSE) 188s > sfc2 <- st_as_sfc(x, as_points = TRUE, use_cpp = FALSE) 188s > identical(sfc1, sfc2) 188s [1] TRUE 188s > 188s > sfc1 <- st_as_sfc(x, as_points = FALSE, use_cpp = TRUE, na.rm = FALSE) 188s > sfc2 <- st_as_sfc(x, as_points = FALSE, use_cpp = FALSE) 188s > identical(sfc1, sfc2) 188s [1] TRUE 188s > 188s > # sf -> stars -> sf 188s > x = st_sfc(st_point(0:1), st_point(1:2), st_point(2:3)) 188s > m = matrix(1:9,3) 188s > colnames(m) = c("a", "b", "c") 188s > foo = st_sf(m, geom = x) 188s > x = st_as_stars(foo) 188s > c(x) 188s stars object with 1 dimensions and 3 attributes 188s attribute(s): 188s Min. 1st Qu. Median Mean 3rd Qu. Max. 188s a 1 1.5 2 2 2.5 3 188s b 4 4.5 5 5 5.5 6 188s c 7 7.5 8 8 8.5 9 188s dimension(s): 188s from to point values 188s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 188s > st_redimension(x) 188s stars object with 2 dimensions and 1 attribute 188s attribute(s): 188s Min. 1st Qu. Median Mean 3rd Qu. Max. 188s a.b.c 1 3 5 5 7 9 188s dimension(s): 188s from to point values 188s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 188s new_dim 1 3 NA a, b, c 188s > c(x, x) 188s stars object with 1 dimensions and 6 attributes 188s attribute(s): 188s Min. 1st Qu. Median Mean 3rd Qu. Max. 188s a 1 1.5 2 2 2.5 3 188s b 4 4.5 5 5 5.5 6 188s c 7 7.5 8 8 8.5 9 188s a.1 1 1.5 2 2 2.5 3 188s b.1 4 4.5 5 5 5.5 6 188s c.1 7 7.5 8 8 8.5 9 188s dimension(s): 188s from to point values 188s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 188s > (y = st_redimension(x, along = list(time = as.Date("2017-11-27") + 0:2))) 188s stars object with 2 dimensions and 1 attribute 188s attribute(s): 188s Min. 1st Qu. Median Mean 3rd Qu. Max. 188s a.b.c 1 3 5 5 7 9 188s dimension(s): 188s from to offset delta refsys point values 188s geom 1 3 NA NA NA TRUE POINT (0 1),...,POINT (2 3) 188s time 1 3 2017-11-27 1 days Date NA NULL 188s > st_as_sf(y) 188s Simple feature collection with 3 features and 3 fields 188s Geometry type: POINT 188s Dimension: XY 188s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 188s CRS: NA 188s 2017-11-27 2017-11-28 2017-11-29 geom 188s 1 1 4 7 POINT (0 1) 188s 2 2 5 8 POINT (1 2) 188s 3 3 6 9 POINT (2 3) 188s > st_as_sf(st_as_stars(foo)) 188s Simple feature collection with 3 features and 3 fields 188s Geometry type: POINT 188s Dimension: XY 188s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 188s CRS: NA 188s a b c geom 188s 1 1 4 7 POINT (0 1) 188s 2 2 5 8 POINT (1 2) 188s 3 3 6 9 POINT (2 3) 188s > 188s > c(x,x,along=1) # NEEDS FIXING! 188s stars object with 1 dimensions and 3 attributes 188s attribute(s): 188s Min. 1st Qu. Median Mean 3rd Qu. Max. 188s a 1 1.25 2 2 2.75 3 188s b 4 4.25 5 5 5.75 6 188s c 7 7.25 8 8 8.75 9 188s dimension(s): 188s from to point values 188s geom 1 6 TRUE POINT (0 1),...,POINT (2 3) 188s > # st_as_stars.sfc 188s > st_as_stars(st_geometry(st_as_sf(y)), nx = 10, ny = 10, as_points = FALSE) 188s stars object with 2 dimensions and 1 attribute 188s attribute(s): 188s Min. 1st Qu. Median Mean 3rd Qu. Max. 188s values 0 0 0 0.06 0 1 188s dimension(s): 188s from to offset delta x/y 188s x 1 10 0 0.2 [x] 188s y 1 10 3 -0.2 [y] 188s > 188s BEGIN TEST sp.R 188s 188s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 188s Copyright (C) 2025 The R Foundation for Statistical Computing 188s Platform: aarch64-unknown-linux-gnu 188s 188s R is free software and comes with ABSOLUTELY NO WARRANTY. 188s You are welcome to redistribute it under certain conditions. 188s Type 'license()' or 'licence()' for distribution details. 188s 188s R is a collaborative project with many contributors. 188s Type 'contributors()' for more information and 188s 'citation()' on how to cite R or R packages in publications. 188s 188s Type 'demo()' for some demos, 'help()' for on-line help, or 188s 'help.start()' for an HTML browser interface to help. 188s Type 'q()' to quit R. 188s 188s > options(rgdal_show_exportToProj4_warnings = "none") 188s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE))) { 188s + demo(meuse) 188s + # remove +init=xxx 188s + meuse@proj4string = CRS( 188s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 188s + ) 188s + meuse.grid@proj4string = CRS( 188s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 188s + ) 188s + 188s + suppressPackageStartupMessages(library(stars)) 188s + (m = st_as_stars(meuse)) 188s + (gr = st_as_stars(meuse.grid)) 188s + 188s + m2 = as(m, "Spatial") 188s + summary(m2) 188s + gr2 = as(gr, "Spatial") 188s + summary(gr2) 188s + 188s + all.equal(meuse, m2, check.attributes = FALSE) 188s + fullgrid(meuse.grid) = TRUE 188s + all.equal(meuse.grid, gr2, check.attributes = FALSE) 188s + 188s + #all.equal(meuse, m2) 188s + #all.equal(meuse.grid, gr2) 188s + } 188s 188s 188s demo(meuse) 188s ---- ~~~~~ 188s 188s > require(sp) 188s 188s > crs = CRS("EPSG:28992") 189s 189s > data("meuse") 189s 189s > coordinates(meuse) <- ~x+y 189s 189s > proj4string(meuse) <- crs 189s 189s > data("meuse.grid") 189s 189s > coordinates(meuse.grid) <- ~x+y 189s 189s > gridded(meuse.grid) <- TRUE 189s 189s > proj4string(meuse.grid) <- crs 189s 189s > data("meuse.riv") 189s 189s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv"))) 189s 189s > proj4string(meuse.riv) <- crs 189s 189s > data("meuse.area") 189s 189s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area"))) 189s 189s > proj4string(meuse.area) <- crs 189s [1] TRUE 189s > 189s BEGIN TEST spacetime.R 189s 189s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 189s Copyright (C) 2025 The R Foundation for Statistical Computing 189s Platform: aarch64-unknown-linux-gnu 189s 189s R is free software and comes with ABSOLUTELY NO WARRANTY. 189s You are welcome to redistribute it under certain conditions. 189s Type 'license()' or 'licence()' for distribution details. 189s 189s R is a collaborative project with many contributors. 189s Type 'contributors()' for more information and 189s 'citation()' on how to cite R or R packages in publications. 189s 189s Type 'demo()' for some demos, 'help()' for on-line help, or 189s 'help.start()' for an HTML browser interface to help. 189s Type 'q()' to quit R. 189s 189s > suppressPackageStartupMessages(library(stars)) 190s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 190s + set.seed(1331) 190s + Sys.setenv(TZ="UTC") 190s + example(STFDF) 190s + 190s + x = st_as_stars(stfdf) 190s + xx = as(x, "STFDF") 190s + 190s + # as.xts.stars: 190s + library(xts) 190s + xts = as.xts(x) 190s + st_as_stars(xts) 190s + st_as_stars(xts, dimensions = st_dimensions(x)) 190s + 190s + library(sp) 190s + pts = SpatialPoints(rbind(c(0,0), c(0,1), c(1,0), c(1,1))) 190s + gridded(pts) = TRUE 190s + 190s + tm = xts(1:10, as.Date("2010-01-01")+0:9) 190s + stfdf = STFDF(pts, tm, data.frame(foo = seq_len(length(pts) * length(tm)))) 190s + x = st_as_stars(stfdf) 190s + xx = as(x, "STFDF") 190s + 190s + x = st_as_stars(as(stfdf, "STSDF")) 190s + } 190s 190s STFDF> sp = cbind(x = c(0,0,1), y = c(0,1,1)) 190s 190s STFDF> row.names(sp) = paste("point", 1:nrow(sp), sep="") 190s 190s STFDF> library(sp) 190s 190s STFDF> sp = SpatialPoints(sp) 190s 190s STFDF> time = as.POSIXct("2010-08-05")+3600*(10:13) 190s 190s STFDF> m = c(10,20,30) # means for each of the 3 point locations 190s 190s STFDF> mydata = rnorm(length(sp)*length(time),mean=rep(m, 4)) 190s 190s STFDF> IDs = paste("ID",1:length(mydata)) 190s 190s STFDF> mydata = data.frame(values = signif(mydata,3), ID=IDs) 190s 190s STFDF> stfdf = STFDF(sp, time, mydata) 190s 190s STFDF> stfdf 190s An object of class "STFDF" 190s Slot "data": 190s values ID 190s 1 9.38 ID 1 190s 2 21.10 ID 2 190s 3 29.80 ID 3 190s 4 11.50 ID 4 190s 5 19.80 ID 5 190s 6 31.20 ID 6 190s 7 10.40 ID 7 190s 8 20.50 ID 8 190s 9 29.80 ID 9 190s 10 10.30 ID 10 190s 11 21.40 ID 11 190s 12 29.40 ID 12 190s 190s Slot "sp": 190s SpatialPoints: 190s x y 190s point1 0 0 190s point2 0 1 190s point3 1 1 190s Coordinate Reference System (CRS) arguments: NA 190s 190s Slot "time": 190s timeIndex 190s 2010-08-05 10:00:00 1 190s 2010-08-05 11:00:00 2 190s 2010-08-05 12:00:00 3 190s 2010-08-05 13:00:00 4 190s 190s Slot "endTime": 190s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 190s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 190s 190s 190s STFDF> stfdf[1:2,] 190s An object of class "STFDF" 190s Slot "data": 190s values ID 190s 1 9.38 ID 1 190s 2 21.10 ID 2 190s 3 11.50 ID 4 190s 4 19.80 ID 5 190s 5 10.40 ID 7 190s 6 20.50 ID 8 190s 7 10.30 ID 10 190s 8 21.40 ID 11 190s 190s Slot "sp": 190s SpatialPoints: 190s x y 190s point1 0 0 190s point2 0 1 190s Coordinate Reference System (CRS) arguments: NA 190s 190s Slot "time": 190s timeIndex 190s 2010-08-05 10:00:00 1 190s 2010-08-05 11:00:00 2 190s 2010-08-05 12:00:00 3 190s 2010-08-05 13:00:00 4 190s 190s Slot "endTime": 190s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 190s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 190s 190s 190s STFDF> stfdf[,1:2] 190s An object of class "STFDF" 190s Slot "data": 190s values ID 190s 1 9.38 ID 1 190s 2 21.10 ID 2 190s 3 29.80 ID 3 190s 4 11.50 ID 4 190s 5 19.80 ID 5 190s 6 31.20 ID 6 190s 190s Slot "sp": 190s SpatialPoints: 190s x y 190s point1 0 0 190s point2 0 1 190s point3 1 1 190s Coordinate Reference System (CRS) arguments: NA 190s 190s Slot "time": 190s timeIndex 190s 2010-08-05 10:00:00 1 190s 2010-08-05 11:00:00 2 190s 190s Slot "endTime": 190s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 190s 190s 190s STFDF> stfdf[,,2] 190s An object of class "STFDF" 190s Slot "data": 190s ID 190s 1 ID 1 190s 2 ID 2 190s 3 ID 3 190s 4 ID 4 190s 5 ID 5 190s 6 ID 6 190s 7 ID 7 190s 8 ID 8 190s 9 ID 9 190s 10 ID 10 190s 11 ID 11 190s 12 ID 12 190s 190s Slot "sp": 190s SpatialPoints: 190s x y 190s point1 0 0 190s point2 0 1 190s point3 1 1 190s Coordinate Reference System (CRS) arguments: NA 190s 190s Slot "time": 190s timeIndex 190s 2010-08-05 10:00:00 1 190s 2010-08-05 11:00:00 2 190s 2010-08-05 12:00:00 3 190s 2010-08-05 13:00:00 4 190s 190s Slot "endTime": 190s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 190s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 190s 190s 190s STFDF> stfdf[,,"values"] 190s An object of class "STFDF" 190s Slot "data": 190s values 190s 1 9.38 190s 2 21.10 190s 3 29.80 190s 4 11.50 190s 5 19.80 190s 6 31.20 190s 7 10.40 190s 8 20.50 190s 9 29.80 190s 10 10.30 190s 11 21.40 190s 12 29.40 190s 190s Slot "sp": 190s SpatialPoints: 190s x y 190s point1 0 0 190s point2 0 1 190s point3 1 1 190s Coordinate Reference System (CRS) arguments: NA 190s 190s Slot "time": 190s timeIndex 190s 2010-08-05 10:00:00 1 190s 2010-08-05 11:00:00 2 190s 2010-08-05 12:00:00 3 190s 2010-08-05 13:00:00 4 190s 190s Slot "endTime": 190s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 190s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 190s 190s 190s STFDF> stfdf[1,] 190s values ID timeIndex 190s 2010-08-05 10:00:00 9.38 ID 1 1 190s 2010-08-05 11:00:00 11.50 ID 4 2 190s 2010-08-05 12:00:00 10.40 ID 7 3 190s 2010-08-05 13:00:00 10.30 ID 10 4 190s 190s STFDF> stfdf[,2] 190s coordinates values ID 190s 1 (0, 0) 11.5 ID 4 190s 2 (0, 1) 19.8 ID 5 190s 3 (1, 1) 31.2 ID 6 190s 190s STFDF> as(stfdf[,,1], "xts") 190s point1 point2 point3 190s 2010-08-05 10:00:00 9.38 21.1 29.8 190s 2010-08-05 11:00:00 11.50 19.8 31.2 190s 2010-08-05 12:00:00 10.40 20.5 29.8 190s 2010-08-05 13:00:00 10.30 21.4 29.4 190s 190s STFDF> as(stfdf[,,2], "xts") 190s point1 point2 point3 190s 2010-08-05 10:00:00 ID 1 ID 2 ID 3 190s 2010-08-05 11:00:00 ID 4 ID 5 ID 6 190s 2010-08-05 12:00:00 ID 7 ID 8 ID 9 190s 2010-08-05 13:00:00 ID 10 ID 11 ID 12 190s 190s STFDF> # examples for [[, [[<-, $ and $<- 190s STFDF> stfdf[[1]] 190s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 190s 190s STFDF> stfdf[["values"]] 190s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 190s 190s STFDF> stfdf[["newVal"]] <- rnorm(12) 190s 190s STFDF> stfdf$ID 190s [1] "ID 1" "ID 2" "ID 3" "ID 4" "ID 5" "ID 6" "ID 7" "ID 8" "ID 9" 190s [10] "ID 10" "ID 11" "ID 12" 190s 190s STFDF> stfdf$ID = paste("OldIDs", 1:12, sep="") 190s 190s STFDF> stfdf$NewID = paste("NewIDs", 12:1, sep="") 190s 190s STFDF> stfdf 190s An object of class "STFDF" 190s Slot "data": 190s values ID newVal NewID 190s 1 9.38 OldIDs1 -0.3125824 NewIDs12 190s 2 21.10 OldIDs2 -1.0536246 NewIDs11 190s 3 29.80 OldIDs3 -0.7188880 NewIDs10 190s 4 11.50 OldIDs4 -1.0525404 NewIDs9 190s 5 19.80 OldIDs5 -0.8441413 NewIDs8 190s 6 31.20 OldIDs6 1.1420848 NewIDs7 190s 7 10.40 OldIDs7 1.9479070 NewIDs6 190s 8 20.50 OldIDs8 -0.4512836 NewIDs5 190s 9 29.80 OldIDs9 0.6695716 NewIDs4 190s 10 10.30 OldIDs10 0.1269003 NewIDs3 190s 11 21.40 OldIDs11 -0.7273297 NewIDs2 190s 12 29.40 OldIDs12 -0.8151803 NewIDs1 190s 190s Slot "sp": 190s SpatialPoints: 190s x y 190s point1 0 0 190s point2 0 1 190s point3 1 1 190s Coordinate Reference System (CRS) arguments: NA 190s 190s Slot "time": 190s timeIndex 190s 2010-08-05 10:00:00 1 190s 2010-08-05 11:00:00 2 190s 2010-08-05 12:00:00 3 190s 2010-08-05 13:00:00 4 190s 190s Slot "endTime": 190s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 190s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 190s 190s 190s STFDF> x = stfdf[stfdf[1:2,],] 190s 190s STFDF> all.equal(x, stfdf[1:2,]) 190s [1] TRUE 190s 190s STFDF> all.equal(stfdf, stfdf[stfdf,]) # converts character to factor... 190s [1] TRUE 190s Loading required package: zoo 190s 190s Attaching package: 'zoo' 190s 190s The following objects are masked from 'package:base': 190s 190s as.Date, as.Date.numeric 190s 191s only the first attribute will used; maybe use merge() first? 191s > 191s BEGIN TEST spatstat.R 191s 191s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 191s Copyright (C) 2025 The R Foundation for Statistical Computing 191s Platform: aarch64-unknown-linux-gnu 191s 191s R is free software and comes with ABSOLUTELY NO WARRANTY. 191s You are welcome to redistribute it under certain conditions. 191s Type 'license()' or 'licence()' for distribution details. 191s 191s R is a collaborative project with many contributors. 191s Type 'contributors()' for more information and 191s 'citation()' on how to cite R or R packages in publications. 191s 191s Type 'demo()' for some demos, 'help()' for on-line help, or 191s 'help.start()' for an HTML browser interface to help. 191s Type 'q()' to quit R. 191s 191s > suppressPackageStartupMessages(library(sf)) 191s > 191s > library(stars) 191s Loading required package: abind 191s > if (suppressPackageStartupMessages(require(spatstat.geom, quietly = TRUE))) { 191s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 191s + s = adrop(read_stars(tif)[,,,1]) > 70 191s + plot(s) 191s + m = as.owin(s) 191s + plot(m) 191s + print(table(m$m)) 191s + } 192s 192s FALSE TRUE 192s 39494 83354 192s > 193s BEGIN TEST stars.R 193s 193s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 193s Copyright (C) 2025 The R Foundation for Statistical Computing 193s Platform: aarch64-unknown-linux-gnu 193s 193s R is free software and comes with ABSOLUTELY NO WARRANTY. 193s You are welcome to redistribute it under certain conditions. 193s Type 'license()' or 'licence()' for distribution details. 193s 193s R is a collaborative project with many contributors. 193s Type 'contributors()' for more information and 193s 'citation()' on how to cite R or R packages in publications. 193s 193s Type 'demo()' for some demos, 'help()' for on-line help, or 193s 'help.start()' for an HTML browser interface to help. 193s Type 'q()' to quit R. 193s 193s > Sys.setenv(TZ="UTC") 193s > suppressPackageStartupMessages(library(stars)) 193s > set.seed(13521) # runif 193s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 193s > (x_ = read_stars(c(tif,tif))) # FIXME: not what you'd expect 193s stars object with 3 dimensions and 2 attributes 193s attribute(s): 193s Min. 1st Qu. Median Mean 3rd Qu. Max. 193s L7_ETMs.tif 1 54 69 68.91242 86 255 193s L7_ETMs.tif.1 1 54 69 68.91242 86 255 193s dimension(s): 194s from to offset delta refsys point x/y 194s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 194s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 194s band 1 6 NA NA NA NA 194s > (x = read_stars(tif)) 194s stars object with 3 dimensions and 1 attribute 194s attribute(s): 194s Min. 1st Qu. Median Mean 3rd Qu. Max. 194s L7_ETMs.tif 1 54 69 68.91242 86 255 194s dimension(s): 194s from to offset delta refsys point x/y 194s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 194s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 194s band 1 6 NA NA NA NA 194s > # image(x) 194s > gdal_crs(tif) 194s Coordinate Reference System: 194s User input: PROJCS["SIRGAS 2000 / UTM zone 25S",GEOGCS["SIRGAS 2000",DATUM["Sistema_de_Referencia_Geocentrico_para_las_AmericaS_2000",SPHEROID["GRS 1980",6378137,298.257222101,AUTHORITY["EPSG","7019"]],AUTHORITY["EPSG","6674"]],PRIMEM["Greenwich",0,AUTHORITY["EPSG","8901"]],UNIT["degree",0.0174532925199433,AUTHORITY["EPSG","9122"]],AUTHORITY["EPSG","4674"]],PROJECTION["Transverse_Mercator"],PARAMETER["latitude_of_origin",0],PARAMETER["central_meridian",-33],PARAMETER["scale_factor",0.9996],PARAMETER["false_easting",500000],PARAMETER["false_northing",10000000],UNIT["metre",1,AUTHORITY["EPSG","9001"]],AXIS["Easting",EAST],AXIS["Northing",NORTH],AUTHORITY["EPSG","31985"]] 194s wkt: 194s PROJCRS["SIRGAS 2000 / UTM zone 25S", 194s BASEGEOGCRS["SIRGAS 2000", 194s DATUM["Sistema de Referencia Geocentrico para las AmericaS 2000", 194s ELLIPSOID["GRS 1980",6378137,298.257222101, 194s LENGTHUNIT["metre",1]]], 194s PRIMEM["Greenwich",0, 194s ANGLEUNIT["degree",0.0174532925199433]], 194s ID["EPSG",4674]], 194s CONVERSION["UTM zone 25S", 194s METHOD["Transverse Mercator", 194s ID["EPSG",9807]], 194s PARAMETER["Latitude of natural origin",0, 194s ANGLEUNIT["degree",0.0174532925199433], 194s ID["EPSG",8801]], 194s PARAMETER["Longitude of natural origin",-33, 194s ANGLEUNIT["degree",0.0174532925199433], 194s ID["EPSG",8802]], 194s PARAMETER["Scale factor at natural origin",0.9996, 194s SCALEUNIT["unity",1], 194s ID["EPSG",8805]], 194s PARAMETER["False easting",500000, 194s LENGTHUNIT["metre",1], 194s ID["EPSG",8806]], 194s PARAMETER["False northing",10000000, 194s LENGTHUNIT["metre",1], 194s ID["EPSG",8807]]], 194s CS[Cartesian,2], 194s AXIS["easting",east, 194s ORDER[1], 194s LENGTHUNIT["metre",1]], 194s AXIS["northing",north, 194s ORDER[2], 194s LENGTHUNIT["metre",1]], 194s ID["EPSG",31985]] 194s > plot(x) 194s > plot(x, join_zlim = FALSE) 194s > x %>% st_set_dimensions(names = c('a', 'b', 'c')) 194s stars object with 3 dimensions and 1 attribute 194s attribute(s): 194s Min. 1st Qu. Median Mean 3rd Qu. Max. 194s L7_ETMs.tif 1 54 69 68.91242 86 255 194s dimension(s): 194s from to offset delta refsys point x/y 194s a 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 194s b 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 194s c 1 6 NA NA NA NA 194s > st_get_dimension_values(x, 3) 195s [1] 1 2 3 4 5 6 195s > 195s > (x1 = st_set_dimensions(x, "band", values = c(1,2,3,4,5,7), names = "band_number", point = TRUE)) 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 1 54 69 68.91242 86 255 195s dimension(s): 195s from to offset delta refsys point values x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 195s band_number 1 6 NA NA NA TRUE 1,...,7 195s > rbind(c(0.45,0.515), c(0.525,0.605), c(0.63,0.69), c(0.775,0.90), c(1.55,1.75), c(2.08,2.35)) %>% 195s + units::set_units(um) -> bw # units::set_units(µm) -> bw 195s > # set bandwidth midpoint: 195s > (x2 = st_set_dimensions(x, "band", values = 0.5 * (bw[,1]+bw[,2]), 195s + names = "bandwidth_midpoint", point = TRUE)) 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 1 54 69 68.91242 86 255 195s dimension(s): 195s from to offset delta refsys point 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 195s bandwidth_midpoint 1 6 NA NA udunits TRUE 195s values x/y 195s x NULL [x] 195s y NULL [y] 195s bandwidth_midpoint 0.4825 [um],...,2.215 [um] 195s > # set bandwidth intervals: 195s > (x3 = st_set_dimensions(x, "band", values = make_intervals(bw), names = "bandwidth")) 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 1 54 69 68.91242 86 255 195s dimension(s): 195s from to offset delta refsys point 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 195s bandwidth 1 6 NA NA udunits NA 195s values x/y 195s x NULL [x] 195s y NULL [y] 195s bandwidth [0.45,0.515) [um],...,[2.08,2.35) [um] 195s > 195s > x + x 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 2 108 138 137.8248 172 510 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s > x * x 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 1 2916 4761 5512.41 7396 65025 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s > x[,,,1:3] 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 21 58 70 70.36041 83 255 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 3 NA NA NA NA 195s > x[,1:100,100:200,] 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 13 54 65 67.21531 77 252 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 100 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 100 200 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s > sqrt(x) 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 1 7.348469 8.306624 8.094006 9.273618 15.96872 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s > st_apply(x, 3, min) 195s stars object with 1 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s min 1 3 15 18.5 29.25 47 195s dimension(s): 195s from to 195s band 1 6 195s > st_apply(x, 1:2, max) 196s stars object with 2 dimensions and 1 attribute 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s max 55 85 96 99.36018 113 255 196s dimension(s): 196s from to offset delta refsys point x/y 196s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 196s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 196s > st_apply(x, 1:2, range) 196s stars object with 3 dimensions and 1 attribute 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s L7_ETMs.tif 1 50 71 72.43565 96 255 196s dimension(s): 196s from to offset delta refsys point x/y 196s range 1 2 NA NA NA NA 196s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 196s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 196s > 196s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 196s > x = read_stars(geomatrix) 196s > y = st_transform(x, st_crs(4326)) 196s > st_coordinates(x)[1:2,] 196s x y 196s 1 1841000 1144000 196s 2 1841002 1143995 196s > 196s > nc = system.file("nc/tos_O1_2001-2002.nc", package = "stars") 196s > if (nc != "" && require(PCICt, quietly = TRUE)) { 196s + print(x <- read_stars(nc)) 196s + print(st_bbox(x)) 196s + s = st_as_stars(st_bbox(x)) # inside = NA 196s + print(st_bbox(s)) 196s + s = st_as_stars(st_bbox(x), inside = TRUE) 196s + print(st_bbox(s)) 196s + s = st_as_stars(st_bbox(x), inside = FALSE) 196s + print(st_bbox(s)) 196s + (s = st_as_stars(st_bbox(x), dy = 1)) 196s + print(st_bbox(s)) 196s + print(identical(st_as_stars(st_bbox(x), dx = 1), st_as_stars(st_bbox(x), dy = 1))) 196s + s = st_as_stars(st_bbox(x), dx = 10) 196s + print(st_bbox(s)) 196s + s = st_as_stars(st_bbox(x), dx = 20) 196s + print(st_bbox(s)) 196s + x1 = x 196s + st_crs(x1) = "OGC:CRS84" 196s + print(identical(st_as_stars(st_bbox(x1), dx = 1), st_as_stars(st_bbox(x1), dx = units::set_units(1, degree)))) 196s + 196s + df = as.data.frame(x) 196s + if (require(units, quietly = TRUE)) 196s + print(units::drop_units(x)) 196s + 196s + print(dimnames(x)) 196s + dimnames(x) <- letters[1:3] 196s + print(dimnames(x)) 196s + } # PCICt 196s > 196s > st_as_stars() 196s stars object with 2 dimensions and 1 attribute 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s values 0 0 0 0 0 0 196s dimension(s): 196s from to offset delta refsys x/y 196s x 1 360 -180 1 WGS 84 (CRS84) [x] 196s y 1 180 90 -1 WGS 84 (CRS84) [y] 196s > 196s > # multiple sub-datasets: 196s > nc_red = system.file("nc/reduced.nc", package = "stars") 196s > red = read_stars(nc_red) 196s sst, anom, err, ice, 196s > red 196s stars object with 4 dimensions and 4 attributes 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 196s sst [degree_Celsius] -1.80 -0.03 13.655 12.9940841 24.8125 32.97 4448 196s anom [degree_Celsius] -10.16 -0.58 -0.080 -0.1855812 0.2100 2.99 4448 196s err [degree_Celsius] 0.11 0.16 0.270 0.2626872 0.3200 0.84 4448 196s ice [percent] 0.01 0.47 0.920 0.7178118 0.9600 1.00 13266 196s dimension(s): 196s from to offset delta refsys x/y 196s x 1 180 -1 2 NA [x] 196s y 1 90 90 -2 NA [y] 196s zlev 1 1 0 [m] NA NA 196s time 1 1 1981-12-31 UTC NA POSIXct 196s > plot(red) 197s > 197s > x = st_xy2sfc(read_stars(tif)[,1:10,1:10,], as_points = FALSE) 197s > st_bbox(x) 197s xmin ymin xmax ymax 197s 288776.3 9120475.8 289061.3 9120760.8 197s > x = read_stars(tif) 197s > merge(split(x, "band")) 197s stars object with 3 dimensions and 1 attribute 197s attribute(s): 197s Min. 1st Qu. Median Mean 3rd Qu. Max. 197s X1.X2.X3.X4.X5.X6 1 54 69 68.91242 86 255 197s dimension(s): 198s from to offset delta refsys point values 198s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 198s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 198s attributes 1 6 NA NA NA NA X1,...,X6 198s x/y 198s x [x] 198s y [y] 198s attributes 198s > 198s > read_stars(c(tif,tif)) # merges as attributes 198s stars object with 3 dimensions and 2 attributes 198s attribute(s): 198s Min. 1st Qu. Median Mean 3rd Qu. Max. 198s L7_ETMs.tif 1 54 69 68.91242 86 255 198s L7_ETMs.tif.1 1 54 69 68.91242 86 255 198s dimension(s): 198s from to offset delta refsys point x/y 198s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 198s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 198s band 1 6 NA NA NA NA 198s > read_stars(c(tif,tif), along = "sensor") 198s stars object with 4 dimensions and 1 attribute 198s attribute(s), summary of first 1e+05 cells: 198s Min. 1st Qu. Median Mean 3rd Qu. Max. 198s L7_ETMs.tif 47 65 76 77.3419 87 255 198s dimension(s): 198s from to offset delta refsys point x/y 198s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 198s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 198s band 1 6 NA NA NA NA 198s sensor 1 2 NA NA NA NA 198s > read_stars(c(tif,tif), along = 4) 198s stars object with 4 dimensions and 1 attribute 198s attribute(s), summary of first 1e+05 cells: 198s Min. 1st Qu. Median Mean 3rd Qu. Max. 198s L7_ETMs.tif 47 65 76 77.3419 87 255 198s dimension(s): 198s from to offset delta refsys point x/y 198s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 198s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 198s band 1 6 NA NA NA NA 198s new_dim 1 2 NA NA NA NA 198s > read_stars(c(tif,tif), along = "band") 198s stars object with 3 dimensions and 1 attribute 198s attribute(s), summary of first 1e+05 cells: 198s Min. 1st Qu. Median Mean 3rd Qu. Max. 198s L7_ETMs.tif 47 65 76 77.3419 87 255 198s dimension(s): 198s from to offset delta refsys point x/y 198s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 198s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 198s band 1 12 NA NA NA NA 198s > read_stars(c(tif,tif), along = 3) 198s stars object with 3 dimensions and 1 attribute 198s attribute(s), summary of first 1e+05 cells: 198s Min. 1st Qu. Median Mean 3rd Qu. Max. 198s L7_ETMs.tif 47 65 76 77.3419 87 255 198s dimension(s): 198s from to offset delta refsys point x/y 198s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 198s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 198s band 1 12 NA NA NA NA 198s > 198s > # cut: 198s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 198s > x = read_stars(tif) 199s > cut(x, c(0, 50, 100, 255)) 199s stars object with 3 dimensions and 1 attribute 199s attribute(s): 199s L7_ETMs.tif 199s (0,50] :156060 199s (50,100] :503764 199s (100,255]: 77264 199s dimension(s): 199s from to offset delta refsys point x/y 199s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 199s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 199s band 1 6 NA NA NA NA 199s > cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255)) 199s stars object with 2 dimensions and 1 attribute 199s attribute(s): 199s L7_ETMs.tif 199s (0,50] : 1 199s (50,100] :117134 199s (100,255]: 5713 199s dimension(s): 199s from to offset delta refsys point x/y 199s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 199s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 199s > plot(cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255))) 199s > 199s > st_bbox(st_dimensions(x)) 199s xmin ymin xmax ymax 199s 288776.3 9110728.8 298722.8 9120760.8 199s > x[x < 0] = NA 199s > x[is.na(x)] = 0 199s > 199s > # c: 199s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 199s > if (FALSE && f != "") { 199s + files = c("avhrr-only-v2.19810901.nc", 199s + "avhrr-only-v2.19810902.nc", 199s + "avhrr-only-v2.19810903.nc", 199s + "avhrr-only-v2.19810904.nc", 199s + "avhrr-only-v2.19810905.nc", 199s + "avhrr-only-v2.19810906.nc", 199s + "avhrr-only-v2.19810907.nc", 199s + "avhrr-only-v2.19810908.nc", 199s + "avhrr-only-v2.19810909.nc") 199s + l = list() 199s + for (f in files) { 199s + from = system.file(paste0("netcdf/", f), package = "starsdata") 199s + l[[f]] = read_stars(from, sub = c("sst", "anom")) 199s + } 199s + ret = do.call(c, l) 199s + print(ret) 199s + ret = adrop(c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 199s + print(ret) 199s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 199s + #print(ret) 199s + } 199s > 199s > st_dimensions(list(matrix(1, 4, 4))) # st_dimensions.default 199s from to point values 199s X1 1 1 FALSE 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 199s > 199s > if (FALSE && require("starsdata", quietly = TRUE)) { 199s + # curvilinear: 199s + s5p = system.file( 199s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 199s + package = "starsdata") 199s + print(s5p) 199s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 199s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 199s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 199s + lat = read_stars(lat_ds) 199s + lon = read_stars(lon_ds) 199s + nit = read_stars(nit_ds) 199s + nit[[1]][nit[[1]] > 9e+36] = NA 199s + 199s + ll = setNames(c(lon, lat), c("x", "y")) 199s + nit.c = st_as_stars(nit, curvilinear = ll) 199s + print(nit.c) 199s + 199s + s5p = system.file( 199s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 199s + package = "starsdata") 199s + nit.c2 = read_stars(s5p, 199s + sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 199s + curvilinear = c("//PRODUCT/latitude", "//PRODUCT/longitude")) 199s + print(all.equal(nit.c, nit.c2)) 199s + } 199s > 199s BEGIN TEST subset.R 199s 199s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 199s Copyright (C) 2025 The R Foundation for Statistical Computing 199s Platform: aarch64-unknown-linux-gnu 199s 199s R is free software and comes with ABSOLUTELY NO WARRANTY. 199s You are welcome to redistribute it under certain conditions. 199s Type 'license()' or 'licence()' for distribution details. 199s 199s R is a collaborative project with many contributors. 199s Type 'contributors()' for more information and 199s 'citation()' on how to cite R or R packages in publications. 199s 199s Type 'demo()' for some demos, 'help()' for on-line help, or 199s 'help.start()' for an HTML browser interface to help. 199s Type 'q()' to quit R. 199s 199s > suppressPackageStartupMessages(library(stars)) 199s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 199s > x = read_stars(tif) 200s > y = st_set_dimensions(x, "band", point = TRUE) 200s > y[,1:10, 1:10, c(1,4,3,2)] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 25 45 57 56.535 64 97 200s dimension(s): 200s from to offset delta refsys point values x/y 200s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 200s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 200s band 1 4 NA NA NA TRUE 1,...,2 200s > y = st_set_dimensions(x, "band", point = NA) 200s > y[,1:10, 1:10, c(1,4,3,2)] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 25 45 57 56.535 64 97 200s dimension(s): 200s from to offset delta refsys point values x/y 200s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 200s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 200s band 1 4 NA NA NA NA [1,2),...,[2,3) 200s > y = st_set_dimensions(x, "band", point = FALSE) 200s > y[,1:10, 1:10, c(1,4,3,2)] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 25 45 57 56.535 64 97 200s dimension(s): 200s from to offset delta refsys point values x/y 200s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 200s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 200s band 1 4 NA NA NA FALSE [1,2),...,[2,3) 200s > y = st_set_dimensions(x, "band", values = letters[1:6]) 200s > y[,1:10, 1:10, c(1,4,3,2)] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 25 45 57 56.535 64 97 200s dimension(s): 200s from to offset delta refsys point values x/y 200s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 200s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 200s band 1 4 NA NA NA NA a,...,b 200s > y = st_set_dimensions(x, "band", values = letters[1:6], point = NA) 200s > y[,1:10, 1:10, c(1,4,3,2)] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 25 45 57 56.535 64 97 200s dimension(s): 200s from to offset delta refsys point values x/y 200s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 200s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 200s band 1 4 NA NA NA NA a,...,b 200s > y = st_set_dimensions(x, "band", values = letters[1:6], point = TRUE) 200s > y[,1:10, 1:10, c(1,4,3,2)] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 25 45 57 56.535 64 97 200s dimension(s): 200s from to offset delta refsys point values x/y 200s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 200s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 200s band 1 4 NA NA NA TRUE a,...,b 200s > 200s BEGIN TEST testthat.R 200s 200s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 200s Copyright (C) 2025 The R Foundation for Statistical Computing 200s Platform: aarch64-unknown-linux-gnu 200s 200s R is free software and comes with ABSOLUTELY NO WARRANTY. 200s You are welcome to redistribute it under certain conditions. 200s Type 'license()' or 'licence()' for distribution details. 200s 200s R is a collaborative project with many contributors. 200s Type 'contributors()' for more information and 200s 'citation()' on how to cite R or R packages in publications. 200s 200s Type 'demo()' for some demos, 'help()' for on-line help, or 200s 'help.start()' for an HTML browser interface to help. 200s Type 'q()' to quit R. 200s 200s > ## load dependencies 200s > library(testthat) 200s > suppressPackageStartupMessages(library(stars)) 201s > 201s > ## test package 201s > test_check("stars") 207s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 207s 207s == Skipped tests (5) =========================================================== 207s * On CRAN (4): 'test-OpenStreetMap.R:2:3', 'test-ncdf.R:1:1', 207s 'test-ncproxy.R:1:1', 'test-rectilinear.R:89:3' 207s * {cubble} is not installed (1): 'test-cubble.R:2:3' 207s 207s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 207s > 208s BEGIN TEST tidy.R 208s 208s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 208s Copyright (C) 2025 The R Foundation for Statistical Computing 208s Platform: aarch64-unknown-linux-gnu 208s 208s R is free software and comes with ABSOLUTELY NO WARRANTY. 208s You are welcome to redistribute it under certain conditions. 208s Type 'license()' or 'licence()' for distribution details. 208s 208s R is a collaborative project with many contributors. 208s Type 'contributors()' for more information and 208s 'citation()' on how to cite R or R packages in publications. 208s 208s Type 'demo()' for some demos, 'help()' for on-line help, or 208s 'help.start()' for an HTML browser interface to help. 208s Type 'q()' to quit R. 208s 208s > suppressPackageStartupMessages(library(stars)) 208s > 208s > if (require(dplyr, quietly = TRUE)) { 208s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 208s + x <- read_stars(tif) 208s + (y <- x %>% select(L7_ETMs.tif)) 208s + (y <- x %>% filter(band > 2)) 208s + (z <- x %>% mutate(foo = 2* L7_ETMs.tif)) 208s + x %>% pull(L7_ETMs.tif) %>% class() 208s + x %>% filter(x > 289900) 208s + x %>% slice("x", 50:100) 208s + 208s + suppressPackageStartupMessages(library(ggplot2)) 208s + ggplot() + geom_stars(data = x) + coord_equal() + facet_wrap(~band) 208s + ggplot() + geom_stars(data = x[,c(1:50,52:100),c(1:45, 50:60)]) + 208s + coord_equal() 208s + ggplot() + geom_stars(data = x[,1:10,1:10,1:2], sf = TRUE) + facet_wrap(~band) 208s + 208s + 208s + # see https://github.com/r-spatial/stars/issues/539 : 208s + x <- read_stars(system.file("tif/L7_ETMs.tif", package = "stars")) 208s + y <- transmute(x, L7_ETMs.tif = units::set_units(L7_ETMs.tif, degree_C)) # same as x but with units 208s + 208s + x - slice(x, 'band', 1) # runs as expected, recycling the second object 208s + try(y - slice(x, 'band', 1)) # fails as expected because x is unitless 208s + try(x - slice(y, 'band', 1)) # fails as expected 208s + y - slice(y, 'band', 1) # runs as expected 208s + } 209s 209s Attaching package: 'dplyr' 209s 209s The following objects are masked from 'package:stats': 209s 209s filter, lag 209s 209s The following objects are masked from 'package:base': 209s 209s intersect, setdiff, setequal, union 209s 209s Error in Ops.units(X[[i]], ...) : 209s both operands of the expression should be "units" objects 209s Error in Ops.units(X[[i]], ...) : 209s both operands of the expression should be "units" objects 209s stars object with 3 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. 209s L7_ETMs.tif [degree_Celsius] -184 -19 -8 -10.2353 0 131 209s dimension(s): 210s from to offset delta refsys point x/y 210s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 210s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 210s band 1 6 NA NA NA NA 210s > 210s BEGIN TEST transform.R 210s 210s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 210s Copyright (C) 2025 The R Foundation for Statistical Computing 210s Platform: aarch64-unknown-linux-gnu 210s 210s R is free software and comes with ABSOLUTELY NO WARRANTY. 210s You are welcome to redistribute it under certain conditions. 210s Type 'license()' or 'licence()' for distribution details. 210s 210s R is a collaborative project with many contributors. 210s Type 'contributors()' for more information and 210s 'citation()' on how to cite R or R packages in publications. 210s 210s Type 'demo()' for some demos, 'help()' for on-line help, or 210s 'help.start()' for an HTML browser interface to help. 210s Type 'q()' to quit R. 210s 210s > suppressPackageStartupMessages(library(stars)) 210s > #suppressPackageStartupMessages(library(lwgeom)) 210s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 210s > (x = read_stars(geomatrix)) 210s stars object with 2 dimensions and 1 attribute 210s attribute(s): 210s Min. 1st Qu. Median Mean 3rd Qu. Max. 210s geomatrix.tif 74 107 123 126.765 132 255 210s dimension(s): 210s from to offset delta refsys point x/y 210s x 1 20 1841002 1.5 WGS 84 / UTM zone 11N TRUE [x] 210s y 1 20 1144003 -1.5 WGS 84 / UTM zone 11N TRUE [y] 210s sheared raster with parameters: -5 -5 210s > new = st_crs(4326) 210s > y = st_transform(x, new) 210s > plot(st_transform(st_as_sfc(st_bbox(x)), new), col = NA, border = 'red') 210s > plot(st_as_sfc(y, as_points=FALSE), col = NA, border = 'green', axes = TRUE, add = TRUE) 210s > image(y, add = TRUE) 210s > plot(st_as_sfc(y, as_points=TRUE), pch=3, cex=.5, col = 'blue', add = TRUE) 210s > plot(st_transform(st_as_sfc(x, as_points=FALSE), new), add = TRUE) 210s > 210s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 210s > x = read_stars(tif)[,1:10,1:10,1:3] 210s > x_ = st_transform(x, st_crs(4326)) 210s > ## IGNORE_RDIFF_BEGIN 210s > if (require(lwgeom, quietly = TRUE)) { 210s + x__ = st_transform_proj(x, st_crs(4326)$proj4string) 210s + st_crs(x_) = st_crs(x__) 210s + print(all.equal(x_,x__)) 210s + 210s + # x__ = st_transform(x, x_) #now in st_warp 210s + # all.equal(x_, x__) 210s + 210s + x = st_xy2sfc(x, as_points = FALSE) 210s + (x_ = st_transform(x, st_crs(4326))) 210s + (x__ = st_transform_proj(x, st_crs(4326))) 210s + print(all.equal(x_,x__,check.attributes = FALSE)) 210s + } 210s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.13.0, PROJ 9.5.1 210s 210s Attaching package: 'lwgeom' 210s 210s The following object is masked from 'package:sf': 210s 210s st_perimeter 210s 211s [1] TRUE 211s Warning messages: 211s 1: In fun(libname, pkgname) : 211s GEOS versions differ: lwgeom has 3.13.0 sf has 3.14.1 211s 2: In fun(libname, pkgname) : 211s PROJ versions differ: lwgeom has 9.5.1 sf has 9.7.0 211s Error in st_transform.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 211s !is.na(st_crs(x)) is not TRUE 211s [1] TRUE 211s > ## IGNORE_RDIFF_END 211s > 211s > # nothing to transform: now errs: 211s > try(st_transform(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 211s > try(st_transform_proj(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 211s Error in st_transform_proj.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 211s !is.na(st_crs(x)) is not TRUE 211s > 211s BEGIN TEST warp.R 211s 211s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 211s Copyright (C) 2025 The R Foundation for Statistical Computing 211s Platform: aarch64-unknown-linux-gnu 211s 211s R is free software and comes with ABSOLUTELY NO WARRANTY. 211s You are welcome to redistribute it under certain conditions. 211s Type 'license()' or 'licence()' for distribution details. 211s 211s R is a collaborative project with many contributors. 211s Type 'contributors()' for more information and 211s 'citation()' on how to cite R or R packages in publications. 211s 211s Type 'demo()' for some demos, 'help()' for on-line help, or 211s 'help.start()' for an HTML browser interface to help. 211s Type 'q()' to quit R. 211s 211s > suppressPackageStartupMessages(library(stars)) 211s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 211s > x = read_stars(geomatrix) 211s > # can stars reproduce what gdal does, by default? 211s > x2 = st_warp(x, use_gdal = TRUE, no_data_value = -9999) 211s > y = st_warp(x, x2) 211s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE) } 211s > if (interactive()) { plot(y, breaks = "equal", axes=TRUE) } 211s > names(x2) = names(y) 211s > all.equal(x2, y) # yes? 211s [1] TRUE 211s > 211s > # does gdal reproduce with stars template object? 211s > (x2 = setNames(st_warp(x, y, use_gdal = TRUE, no_data_value=-1), "file.tif")) 211s stars object with 2 dimensions and 1 attribute 211s attribute(s): 211s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 211s file.tif 74 115 123 126.4289 132 255 224 211s dimension(s): 211s from to offset delta refsys point x/y 211s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 211s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 211s > 211s > # does gdal reproduce what stars does, default cell size? 211s > (x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE)) 211s stars object with 2 dimensions and 1 attribute 211s attribute(s): 211s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 211s geomatrix.tif 74 115 123 126.4289 132 255 224 211s dimension(s): 211s from to offset delta refsys x/y 211s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N [x] 211s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N [y] 211s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 211s stars object with 2 dimensions and 1 attribute 211s attribute(s): 211s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 211s file.tif 74 115 123 126.4289 132 255 224 211s dimension(s): 211s from to offset delta refsys point x/y 211s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 211s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 211s > 211s > # try with multiple bands: 211s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 211s > (x1 = read_stars(tif)) 211s stars object with 3 dimensions and 1 attribute 211s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. 212s L7_ETMs.tif 1 54 69 68.91242 86 255 212s dimension(s): 212s from to offset delta refsys point x/y 212s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 212s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 212s band 1 6 NA NA NA NA 212s > tifcp = tempfile(fileext = ".tif") 212s > file.copy(tif, tifcp) 212s [1] TRUE 212s > x1p = read_stars(tifcp, proxy = TRUE) 212s > st_dimensions(x1p) 212s from to offset delta refsys point x/y 212s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 212s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 212s band 1 6 NA NA NA NA 212s > (x1a = st_warp(x1, crs = st_crs(4326))) 212s stars object with 3 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 212s L7_ETMs.tif 1 54 69 68.93072 86 255 8778 212s dimension(s): 212s from to offset delta refsys x/y 212s x 1 350 -34.92 0.0002592 WGS 84 [x] 212s y 1 352 -7.95 -0.0002592 WGS 84 [y] 212s band 1 6 NA NA NA 212s > (x1b = setNames(st_warp(x1, x1p, use_gdal = TRUE, no_data_value=-1), "file.tif")) 212s stars object with 3 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. 212s file.tif 1 54 69 68.91242 86 255 212s dimension(s): 212s from to offset delta refsys point x/y 212s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 212s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 212s band 1 6 NA NA NA NA 212s > 212s > # does gdal reproduce what stars does? Smaller grid: 212s > x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE, cellsize = 3) 212s > # x2 = x2[,2:43,2:43] 212s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE, reset = FALSE) } 212s > if (interactive()) { plot(st_as_sfc(st_bbox(x2)), add = TRUE, col = NA, border = 'red') } 212s > ### doesn't work: FIXME: check with more recent GDAL: 212s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 212s stars object with 2 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 212s file.tif 74 107 123 126.6584 132 255 727 212s dimension(s): 212s from to offset delta refsys point x/y 212s x 1 44 1840902 3 WGS 84 / UTM zone 11N FALSE [x] 212s y 1 44 1144003 -3 WGS 84 / UTM zone 11N FALSE [y] 212s > if (interactive()) { plot(y, breaks = "equal") } 212s > names(x2) = names(y) 212s > # isTRUE(all.equal(x2, y, check.attributes=FALSE)) 212s > m = mean(as.vector(x2[[1]]==y[[1]]), na.rm = TRUE) 212s > u = unique(as.vector(x2[[1]]-y[[1]])) 212s > 212s > g = st_as_stars() 212s > attr(g, "dimensions")$x$offset = 0 212s > g$values = as.vector(t(matrix(seq_len(prod(dim(g))), 180, 360))) 212s > if (interactive()) { plot(g, axes=TRUE) } 212s > a = st_warp(g, st_as_stars(), use_gdal=FALSE) 212s > b = st_warp(g, st_as_stars(), use_gdal=TRUE, no_data_value = -1) 212s > all.equal(a, b, check.attributes = FALSE) 212s [1] TRUE 212s > 212s BEGIN TEST write.R 212s 212s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 212s Copyright (C) 2025 The R Foundation for Statistical Computing 212s Platform: aarch64-unknown-linux-gnu 212s 212s R is free software and comes with ABSOLUTELY NO WARRANTY. 212s You are welcome to redistribute it under certain conditions. 212s Type 'license()' or 'licence()' for distribution details. 212s 212s R is a collaborative project with many contributors. 212s Type 'contributors()' for more information and 212s 'citation()' on how to cite R or R packages in publications. 212s 212s Type 'demo()' for some demos, 'help()' for on-line help, or 212s 'help.start()' for an HTML browser interface to help. 212s Type 'q()' to quit R. 212s 212s > suppressPackageStartupMessages(library(stars)) 213s > 213s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 213s > (x = read_stars(tif)) 213s stars object with 3 dimensions and 1 attribute 213s attribute(s): 213s Min. 1st Qu. Median Mean 3rd Qu. Max. 213s L7_ETMs.tif 1 54 69 68.91242 86 255 213s dimension(s): 213s from to offset delta refsys point x/y 213s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 213s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 213s band 1 6 NA NA NA NA 213s > 213s > # write stars object: 213s > write_stars(x, tempfile(), driver = "GTiff") 213s > 213s > # write stars_proxy object: 213s > (x = read_stars(tif, proxy = TRUE)) 213s stars_proxy object with 1 attribute in 1 file(s): 213s $L7_ETMs.tif 213s [1] "[...]/L7_ETMs.tif" 213s 213s dimension(s): 213s from to offset delta refsys point x/y 213s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 213s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 213s band 1 6 NA NA NA NA 213s > write_stars(x, tempfile(), driver = "GTiff") 213s 213s > 213s autopkgtest [17:33:53]: test run-unit-test: -----------------------] 214s run-unit-test PASS 214s autopkgtest [17:33:54]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 214s autopkgtest [17:33:54]: test pkg-r-autopkgtest: preparing testbed 233s Creating nova instance adt-resolute-arm64-r-cran-stars-20260130-173020-juju-7f2275-prod-proposed-migration-environment-2-22ddd426-b493-410d-9832-ecaf3e12bc07 from image adt/ubuntu-resolute-arm64-server-20260130.img (UUID d80a3628-95a8-4c17-a25a-26b02882b363)... 283s autopkgtest [17:35:03]: testbed dpkg architecture: arm64 283s autopkgtest [17:35:03]: testbed apt version: 3.1.14 284s autopkgtest [17:35:04]: @@@@@@@@@@@@@@@@@@@@ test bed setup 284s autopkgtest [17:35:04]: testbed release detected to be: resolute 284s autopkgtest [17:35:04]: updating testbed package index (apt update) 285s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 285s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 285s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 285s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 285s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1267 kB] 285s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [105 kB] 285s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [30.9 kB] 285s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [4676 B] 285s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [120 kB] 285s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [4276 B] 285s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [20.7 kB] 285s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [328 B] 285s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [995 kB] 285s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [28.6 kB] 285s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [23.7 kB] 285s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [988 B] 289s Fetched 2726 kB in 1s (3737 kB/s) 289s Reading package lists... 290s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 290s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 290s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 290s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 291s Reading package lists... 291s Reading package lists... 291s Building dependency tree... 291s Reading state information... 291s Calculating upgrade... 292s The following packages will be upgraded: 292s 3cpio bzip2 inetutils-telnet libbz2-1.0 libsqlite3-0 rng-tools-debian telnet 292s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 292s Need to get 1199 kB of archives. 292s After this operation, 62.5 kB disk space will be freed. 292s Get:1 http://ftpmaster.internal/ubuntu resolute/universe arm64 rng-tools-debian arm64 2.6build1 [44.3 kB] 292s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 bzip2 arm64 1.0.8-6build2 [34.0 kB] 292s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-1.0 arm64 1.0.8-6build2 [34.9 kB] 292s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libsqlite3-0 arm64 3.46.1-9 [711 kB] 292s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 inetutils-telnet arm64 2:2.7-2ubuntu1 [104 kB] 292s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 telnet all 0.17+2.7-2ubuntu1 [3636 B] 292s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 3cpio arm64 0.13.1-1ubuntu1 [267 kB] 293s dpkg-preconfigure: unable to re-open stdin: No such file or directory 293s Fetched 1199 kB in 0s (2676 kB/s) 293s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 293s Preparing to unpack .../rng-tools-debian_2.6build1_arm64.deb ... 293s Unpacking rng-tools-debian (2.6build1) over (2.6) ... 293s Preparing to unpack .../bzip2_1.0.8-6build2_arm64.deb ... 293s Unpacking bzip2 (1.0.8-6build2) over (1.0.8-6build1) ... 293s Preparing to unpack .../libbz2-1.0_1.0.8-6build2_arm64.deb ... 293s Unpacking libbz2-1.0:arm64 (1.0.8-6build2) over (1.0.8-6build1) ... 293s Setting up libbz2-1.0:arm64 (1.0.8-6build2) ... 293s (Reading database ... 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(0.17+2.6-4ubuntu1) ... 294s Preparing to unpack .../3cpio_0.13.1-1ubuntu1_arm64.deb ... 294s Unpacking 3cpio (0.13.1-1ubuntu1) over (0.12.0-1ubuntu1) ... 294s Setting up 3cpio (0.13.1-1ubuntu1) ... 294s Setting up libsqlite3-0:arm64 (3.46.1-9) ... 294s Setting up inetutils-telnet (2:2.7-2ubuntu1) ... 294s Setting up bzip2 (1.0.8-6build2) ... 294s Setting up rng-tools-debian (2.6build1) ... 295s Setting up telnet (0.17+2.7-2ubuntu1) ... 295s Processing triggers for man-db (2.13.1-1) ... 296s Processing triggers for libc-bin (2.42-2ubuntu4) ... 296s autopkgtest [17:35:16]: upgrading testbed (apt dist-upgrade and autopurge) 296s Reading package lists... 296s Building dependency tree... 296s Reading state information... 296s Calculating upgrade... 297s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 297s Reading package lists... 297s Building dependency tree... 297s Reading state information... 297s Solving dependencies... 298s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 298s autopkgtest [17:35:18]: rebooting testbed after setup commands that affected boot 338s Reading package lists... 339s Building dependency tree... 339s Reading state information... 339s Solving dependencies... 339s The following NEW packages will be installed: 339s build-essential cpp cpp-15 cpp-15-aarch64-linux-gnu cpp-aarch64-linux-gnu 339s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 339s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15 339s g++-15-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-15 339s gcc-15-aarch64-linux-gnu gcc-aarch64-linux-gnu gdal-data gdal-plugins 339s gfortran gfortran-15 gfortran-15-aarch64-linux-gnu 339s gfortran-aarch64-linux-gnu icu-devtools javascript-common libabsl20260107 339s libaec0 libaom3 libarmadillo15 libarpack2t64 libasan8 libavif16 libblas-dev 339s libblas3 libblosc1 libbz2-dev libcairo2 libcc1-0 libcfitsio10t64 libdatrie1 339s libdav1d7 libde265-0 libdeflate-dev libdeflate0 libfontconfig1 libfreexl1 339s libfyba0t64 libgav1-2 libgcc-15-dev libgdal38 libgeos-c1t64 libgeos3.14.1 339s libgeotiff5 libgfortran-15-dev libgfortran5 libgif7 libgomp1 libgpgmepp6t64 339s libgraphite2-3 libharfbuzz0b libhdf4-0 libhdf5-310 libhdf5-hl-310 339s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libhwasan0 libhwy1t64 339s libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 339s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 339s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 339s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 339s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 339s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 339s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3 339s liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64 339s libmpc3 libmuparser2v5 libmysqlclient24 libncurses-dev libnetcdf22 libodbc2 339s libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 339s libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 339s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 339s libpoppler147 libpq5 libproj25 libqhull-r8.0 libreadline-dev librttopo1 339s libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64 libstdc++-15-dev 339s libsuperlu7 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 339s libtk8.6 libtsan2 libubsan1 libudunits2-0 libudunits2-data liburiparser1 339s libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 339s libxss1 libxt6t64 libyuv0 libzstd-dev mysql-common node-bootstrap-sass 339s node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest 339s pkgconf pkgconf-bin proj-data r-base-core r-base-dev r-cran-abind 339s r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio 339s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-cftime 339s r-cran-class r-cran-classint r-cran-cli r-cran-clue r-cran-cluster 339s r-cran-codetools r-cran-collapse r-cran-commonmark r-cran-covr r-cran-cpp11 339s r-cran-crayon r-cran-curl r-cran-dbi r-cran-deldir r-cran-desc 339s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-evaluate 339s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fnn r-cran-fontawesome 339s r-cran-formula r-cran-fs r-cran-future r-cran-future.apply r-cran-generics 339s r-cran-ggforce r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue 339s r-cran-goftest r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools 339s r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib 339s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later 339s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv 339s r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata 339s r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise 339s r-cran-mgcv r-cran-mime r-cran-misctools r-cran-ncdfgeom r-cran-ncmeta 339s r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict 339s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 339s r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx 339s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6 339s r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils 339s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex 339s r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot 339s r-cran-s2 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-shiny 339s r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 339s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 339s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 339s r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils 339s r-cran-stars r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 339s r-cran-systemfonts r-cran-tensor r-cran-terra r-cran-testthat r-cran-tibble 339s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tweenr r-cran-units 339s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-waldo 339s r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml 339s r-cran-zoo unixodbc-common unzip x11-common xdg-utils zip zlib1g-dev 339s 0 upgraded, 343 newly installed, 0 to remove and 0 not upgraded. 339s Need to get 388 MB of archives. 339s After this operation, 1141 MB of additional disk space will be used. 339s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1build1 [676 kB] 340s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-2 [55.6 kB] 340s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [11.7 MB] 340s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-12ubuntu1 [1030 B] 340s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 340s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 340s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-12ubuntu1 [49.0 kB] 340s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 340s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-12ubuntu1 [27.8 kB] 341s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-12ubuntu1 [2920 kB] 341s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-12ubuntu1 [1316 kB] 341s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-12ubuntu1 [2688 kB] 341s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-12ubuntu1 [1175 kB] 341s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-12ubuntu1 [1638 kB] 341s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-12ubuntu1 [2600 kB] 342s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [23.1 MB] 343s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-12ubuntu1 [519 kB] 343s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 343s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 343s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-12ubuntu1 [2549 kB] 343s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [13.2 MB] 344s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-12ubuntu1 [25.3 kB] 344s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 344s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 344s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu2 [5254 B] 344s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 dctrl-tools arm64 2.24-3build4 [102 kB] 344s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 344s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 345s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 345s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 345s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 345s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 345s Get:33 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 345s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 345s Get:35 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-data all 3.12.1+dfsg-1 [278 kB] 345s Get:36 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-plugins arm64 3.12.1+dfsg-1 [26.8 kB] 345s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 345s Get:38 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran-15-dev arm64 15.2.0-12ubuntu1 [490 kB] 345s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [12.5 MB] 346s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15 arm64 15.2.0-12ubuntu1 [18.1 kB] 346s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1022 B] 346s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran arm64 4:15.2.0-4ubuntu1 [1160 B] 346s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 icu-devtools arm64 78.2-1ubuntu1 [207 kB] 346s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1 [4828 B] 346s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 libabsl20260107 arm64 20260107.0-0ubuntu2 [563 kB] 346s Get:46 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.5-1 [21.8 kB] 346s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 libaom3 arm64 3.13.1-2 [1773 kB] 346s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 346s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 346s Get:50 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarpack2t64 arm64 3.9.1-6 [94.9 kB] 346s Get:51 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsuperlu7 arm64 7.0.1+dfsg1-2 [171 kB] 346s Get:52 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarmadillo15 arm64 1:15.2.1+dfsg-2 [108 kB] 346s Get:53 http://ftpmaster.internal/ubuntu resolute/universe arm64 libdav1d7 arm64 1.5.3-1 [297 kB] 346s Get:54 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgav1-2 arm64 0.20.0-2build1 [547 kB] 346s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB] 346s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 346s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libyuv0 arm64 0.0.1922.20260106-1 [160 kB] 346s Get:58 http://ftpmaster.internal/ubuntu resolute/universe arm64 libavif16 arm64 1.3.0-1ubuntu3 [112 kB] 346s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas-dev arm64 3.12.1-7ubuntu1 [160 kB] 346s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libsnappy1v5 arm64 1.2.2-2 [30.1 kB] 346s Get:61 http://ftpmaster.internal/ubuntu resolute/universe arm64 libblosc1 arm64 1.21.5+ds-2 [25.9 kB] 346s Get:62 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-dev arm64 1.0.8-6build2 [34.9 kB] 346s Get:63 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 346s Get:64 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 346s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 346s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 346s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 346s Get:68 http://ftpmaster.internal/ubuntu resolute/universe arm64 libcfitsio10t64 arm64 4.6.3-1 [517 kB] 346s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 346s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libde265-0 arm64 1.0.16-1build1 [148 kB] 346s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 346s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate-dev arm64 1.23-2 [53.6 kB] 346s Get:73 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfyba0t64 arm64 4.1.1-11build2 [119 kB] 346s Get:74 http://ftpmaster.internal/ubuntu resolute/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [24.4 kB] 346s Get:75 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfreexl1 arm64 2.0.0-1build3 [42.4 kB] 346s Get:76 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos3.14.1 arm64 3.14.1-2 [935 kB] 346s Get:77 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos-c1t64 arm64 3.14.1-2 [110 kB] 346s Get:78 http://ftpmaster.internal/ubuntu resolute/universe arm64 proj-data all 9.7.1-1 [7950 kB] 346s Get:79 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 346s Get:80 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 346s Get:81 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 346s Get:82 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 346s Get:83 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 346s Get:84 http://ftpmaster.internal/ubuntu resolute/universe arm64 libproj25 arm64 9.7.1-1 [1370 kB] 346s Get:85 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeotiff5 arm64 1.7.4-1 [58.9 kB] 346s Get:86 http://ftpmaster.internal/ubuntu resolute/main arm64 libgif7 arm64 5.2.2-1ubuntu3 [35.8 kB] 346s Get:87 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.5-1 [17.0 kB] 346s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf4-0 arm64 4.3.1-2 [304 kB] 346s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.6+repack-2 [1287 kB] 347s Get:90 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-aomdec arm64 1.21.2-1 [13.9 kB] 347s Get:91 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-libde265 arm64 1.21.2-1 [9696 B] 347s Get:92 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif1 arm64 1.21.2-1 [502 kB] 347s Get:93 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwy1t64 arm64 1.3.0-2 [513 kB] 347s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 liblcms2-2 arm64 2.17-1 [170 kB] 347s Get:95 http://ftpmaster.internal/ubuntu resolute/main arm64 libjxl0.11 arm64 0.11.1-6ubuntu1 [909 kB] 347s Get:96 http://ftpmaster.internal/ubuntu resolute/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB] 347s Get:97 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlbase1t64 arm64 1.3.0-13 [48.2 kB] 347s Get:98 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmldom1t64 arm64 1.3.0-13 [143 kB] 347s Get:99 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlengine1t64 arm64 1.3.0-13 [68.9 kB] 347s Get:100 http://ftpmaster.internal/ubuntu resolute/universe arm64 libmuparser2v5 arm64 2.3.4-2 [129 kB] 347s Get:101 http://ftpmaster.internal/ubuntu resolute/main arm64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 347s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 libmysqlclient24 arm64 8.4.8-0ubuntu1 [1244 kB] 347s Get:103 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-310 arm64 1.14.6+repack-2 [59.1 kB] 347s Get:104 http://ftpmaster.internal/ubuntu resolute/universe arm64 libnetcdf22 arm64 1:4.9.3-1build1 [555 kB] 347s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libltdl7 arm64 2.5.4-9 [43.3 kB] 347s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbc2 arm64 2.3.14-1 [143 kB] 347s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 unixodbc-common all 2.3.14-1 [8792 B] 347s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbcinst2 arm64 2.3.14-1 [30.6 kB] 347s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 libopenjp2-7 arm64 2.5.4-1 [180 kB] 347s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libgpgmepp6t64 arm64 1.24.2-3ubuntu2 [117 kB] 347s Get:111 http://ftpmaster.internal/ubuntu resolute/main arm64 libpoppler147 arm64 25.03.0-11.1 [1149 kB] 347s Get:112 http://ftpmaster.internal/ubuntu resolute/main arm64 libpq5 arm64 18.1-2 [151 kB] 347s Get:113 http://ftpmaster.internal/ubuntu resolute/universe arm64 libqhull-r8.0 arm64 2020.2-8 [191 kB] 347s Get:114 http://ftpmaster.internal/ubuntu resolute/universe arm64 librttopo1 arm64 1.1.0-4 [190 kB] 347s Get:115 http://ftpmaster.internal/ubuntu resolute/universe arm64 libspatialite8t64 arm64 5.1.0-3ubuntu1 [1816 kB] 347s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build2 [913 kB] 347s Get:117 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgdal38 arm64 3.12.1+dfsg-1 [10.4 MB] 347s Get:118 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 347s Get:119 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.1-1 [510 kB] 347s Get:120 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 347s Get:121 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 347s Get:122 http://ftpmaster.internal/ubuntu resolute/main arm64 libicu-dev arm64 78.2-1ubuntu1 [12.5 MB] 347s Get:123 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu2 [306 kB] 347s Get:124 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 347s Get:125 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 347s Get:126 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 347s Get:127 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 347s Get:128 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 347s Get:129 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 347s Get:130 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 347s Get:131 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 347s Get:132 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 347s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 347s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 347s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 347s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 347s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 347s Get:138 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 347s Get:139 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-2 [41.3 kB] 347s Get:140 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack-dev arm64 3.12.1-7ubuntu1 [4456 kB] 347s Get:141 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 347s Get:142 http://ftpmaster.internal/ubuntu resolute/main arm64 libncurses-dev arm64 6.6+20251231-1 [391 kB] 347s Get:143 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 347s Get:144 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 347s Get:145 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 347s Get:146 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 347s Get:147 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 347s Get:148 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 347s Get:149 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 347s Get:150 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-16-0 arm64 10.46-1 [225 kB] 347s Get:151 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-32-0 arm64 10.46-1 [213 kB] 347s Get:152 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-posix3 arm64 10.46-1 [7300 B] 348s Get:153 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-dev arm64 10.46-1 [772 kB] 348s Get:154 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 348s Get:155 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 348s Get:156 http://ftpmaster.internal/ubuntu resolute/main arm64 libpng-dev arm64 1.6.54-1 [268 kB] 348s Get:157 http://ftpmaster.internal/ubuntu resolute/main arm64 libreadline-dev arm64 8.3-3 [199 kB] 348s Get:158 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB] 348s Get:159 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [1024 kB] 348s Get:160 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 348s Get:161 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 348s Get:162 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 348s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-data all 2.2.28-8 [19.3 kB] 348s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-0 arm64 2.2.28-8 [53.0 kB] 348s Get:165 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 348s Get:166 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-2 [349 kB] 348s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 348s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 348s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 348s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 348s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 348s Get:172 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu2 [175 kB] 348s Get:173 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 348s Get:174 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 348s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 349s Get:176 http://ftpmaster.internal/ubuntu resolute/main arm64 liblzma-dev arm64 5.8.2-2 [180 kB] 349s Get:177 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 349s Get:178 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 349s Get:179 http://ftpmaster.internal/ubuntu resolute/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 349s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 349s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 pkg-r-autopkgtest all 20250812 [6158 B] 349s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 349s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 349s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 349s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 349s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 349s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 349s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 349s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 349s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 349s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 349s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 349s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 349s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 349s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 349s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 349s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 349s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 349s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 349s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB] 349s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 349s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 349s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-e1071 arm64 1.7-17-1 [576 kB] 349s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-kernsmooth arm64 2.23-26-1build1 [93.6 kB] 349s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-classint arm64 0.4-11+dfsg-1 [108 kB] 349s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1build1 [855 kB] 349s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.21-2 [83.6 kB] 349s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 349s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 349s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB] 349s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s2 arm64 1.1.9-1build1 [1766 kB] 349s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-units arm64 0.8-7+dfsg-2 [289 kB] 349s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sf arm64 1.0-19+dfsg-2build2 [3240 kB] 349s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 349s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 349s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 349s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 349s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB] 349s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 349s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 349s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 349s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 349s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 349s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 349s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 349s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 349s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 349s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 349s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 349s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 350s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 350s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 350s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 350s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 350s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 350s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cftime all 1.7.2-1 [918 kB] 350s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cluster arm64 2.1.8.1-1 [569 kB] 350s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clue arm64 0.3-66-1 [967 kB] 350s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 350s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-collapse arm64 2.1.0-1 [3304 kB] 350s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 350s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 350s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rex all 1.2.1-1build1 [126 kB] 350s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 350s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 350s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 350s Get:247 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 350s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 350s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 350s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 350s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 350s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 350s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1build1 [1154 kB] 350s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 350s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 350s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 350s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 350s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 350s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-globals all 0.18.0-1 [158 kB] 350s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 350s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-parallelly arm64 1.42.0-1 [540 kB] 350s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 350s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 350s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 350s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 350s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 350s Get:267 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB] 350s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 350s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mgcv arm64 1.9-4-1 [3546 kB] 351s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 351s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 351s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 351s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 351s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 351s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tweenr arm64 2.0.3-1 [404 kB] 351s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 351s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-systemfonts arm64 1.2.1-1 [302 kB] 351s Get:278 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 351s Get:279 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggforce arm64 0.4.2-1 [1778 kB] 351s Get:280 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 351s Get:281 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 351s Get:282 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggthemes all 5.2.0-1 [760 kB] 351s Get:283 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-goftest arm64 1.2-3-1build1 [61.3 kB] 351s Get:284 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gridextra all 2.3-3build2 [1032 kB] 351s Get:285 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 351s Get:286 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 351s Get:287 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 351s Get:288 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 351s Get:289 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 351s Get:290 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB] 351s Get:291 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 351s Get:292 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 351s Get:293 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-zoo arm64 1.8-15-1 [1025 kB] 351s Get:294 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lmtest arm64 0.9.40-1build1 [400 kB] 351s Get:295 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lwgeom arm64 0.2-14-1 [394 kB] 351s Get:296 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maps arm64 3.4.2.1-1 [2350 kB] 351s Get:297 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB] 352s Get:298 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB] 352s Get:299 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 352s Get:300 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maxlik all 1.5-2.2-1 [1115 kB] 352s Get:301 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-rnetcdf arm64 2.11-1-1 [236 kB] 352s Get:302 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 352s Get:303 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncmeta all 0.4.0-1 [362 kB] 352s Get:304 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stars all 0.6-8-1 [4414 kB] 352s Get:305 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 352s Get:306 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 352s Get:307 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pcict arm64 0.5-4.4-1 [94.0 kB] 352s Get:308 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 352s Get:309 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.1.1-1 [131 kB] 352s Get:310 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.1-1 [252 kB] 352s Get:311 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 352s Get:312 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rdpack all 2.6.3-1 [636 kB] 352s Get:313 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plm all 2.6-7-1 [1823 kB] 352s Get:314 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 352s Get:315 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-randomforest arm64 4.7-1.2-1 [216 kB] 352s Get:316 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sp arm64 1:2.2-0+dfsg-1 [1443 kB] 352s Get:317 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-terra arm64 1.8-70-1build2 [4198 kB] 352s Get:318 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-raster arm64 3.6-31-2 [3148 kB] 352s Get:319 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 352s Get:320 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 352s Get:321 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 352s Get:322 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 352s Get:323 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 352s Get:324 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 353s Get:325 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 353s Get:326 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-6-1 [8270 kB] 353s Get:327 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 353s Get:328 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xts arm64 0.14.1-1 [1189 kB] 353s Get:329 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spacetime all 1.3-3-2 [2780 kB] 353s Get:330 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.utils arm64 3.1-3-1 [386 kB] 353s Get:331 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.data all 3.1-6-1 [4153 kB] 353s Get:332 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.univar arm64 3.1-2-1 [314 kB] 353s Get:333 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.geom arm64 3.3-6-1 [3941 kB] 353s Get:334 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.random arm64 3.3-3-1 [1163 kB] 353s Get:335 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tensor all 1.5-4build1 [16.3 kB] 353s Get:336 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.sparse arm64 3.1-0-1 [218 kB] 353s Get:337 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.explore arm64 3.3-4-1 [3272 kB] 353s Get:338 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.model arm64 3.3-4-1 [3398 kB] 353s Get:339 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.linnet arm64 3.2-5-1 [1507 kB] 353s Get:340 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat arm64 3.3-1-1 [4120 kB] 353s Get:341 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.2-1 [153 kB] 353s Get:342 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 353s Get:343 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 354s Preconfiguring packages ... 354s Fetched 388 MB in 14s (27.6 MB/s) 354s Selecting previously unselected package libisl23:arm64. 355s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 355s Preparing to unpack .../000-libisl23_0.27-1build1_arm64.deb ... 355s Unpacking libisl23:arm64 (0.27-1build1) ... 355s Selecting previously unselected package libmpc3:arm64. 355s Preparing to unpack .../001-libmpc3_1.3.1-2_arm64.deb ... 355s Unpacking libmpc3:arm64 (1.3.1-2) ... 355s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 355s Preparing to unpack .../002-cpp-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package cpp-15. 355s Preparing to unpack .../003-cpp-15_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package cpp-aarch64-linux-gnu. 355s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 355s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 355s Selecting previously unselected package cpp. 355s Preparing to unpack .../005-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 355s Unpacking cpp (4:15.2.0-4ubuntu1) ... 355s Selecting previously unselected package libcc1-0:arm64. 355s Preparing to unpack .../006-libcc1-0_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking libcc1-0:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package libgomp1:arm64. 355s Preparing to unpack .../007-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package libitm1:arm64. 355s Preparing to unpack .../008-libitm1_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking libitm1:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package libasan8:arm64. 355s Preparing to unpack .../009-libasan8_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking libasan8:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package liblsan0:arm64. 355s Preparing to unpack .../010-liblsan0_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking liblsan0:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package libtsan2:arm64. 355s Preparing to unpack .../011-libtsan2_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking libtsan2:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package libubsan1:arm64. 355s Preparing to unpack .../012-libubsan1_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking libubsan1:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package libhwasan0:arm64. 355s Preparing to unpack .../013-libhwasan0_15.2.0-12ubuntu1_arm64.deb ... 355s Unpacking libhwasan0:arm64 (15.2.0-12ubuntu1) ... 355s Selecting previously unselected package libgcc-15-dev:arm64. 356s Preparing to unpack .../014-libgcc-15-dev_15.2.0-12ubuntu1_arm64.deb ... 356s Unpacking libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 356s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 356s Preparing to unpack .../015-gcc-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 356s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 356s Selecting previously unselected package gcc-15. 356s Preparing to unpack .../016-gcc-15_15.2.0-12ubuntu1_arm64.deb ... 356s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 356s Selecting previously unselected package gcc-aarch64-linux-gnu. 356s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 356s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 356s Selecting previously unselected package gcc. 356s Preparing to unpack .../018-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 356s Unpacking gcc (4:15.2.0-4ubuntu1) ... 356s Selecting previously unselected package libstdc++-15-dev:arm64. 356s Preparing to unpack .../019-libstdc++-15-dev_15.2.0-12ubuntu1_arm64.deb ... 356s Unpacking libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 356s Selecting previously unselected package g++-15-aarch64-linux-gnu. 356s Preparing to unpack .../020-g++-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 356s Unpacking g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 357s Selecting previously unselected package g++-15. 357s Preparing to unpack .../021-g++-15_15.2.0-12ubuntu1_arm64.deb ... 357s Unpacking g++-15 (15.2.0-12ubuntu1) ... 357s Selecting previously unselected package g++-aarch64-linux-gnu. 357s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 357s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 357s Selecting previously unselected package g++. 357s Preparing to unpack .../023-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 357s Unpacking g++ (4:15.2.0-4ubuntu1) ... 357s Selecting previously unselected package build-essential. 357s Preparing to unpack .../024-build-essential_12.12ubuntu2_arm64.deb ... 357s Unpacking build-essential (12.12ubuntu2) ... 357s Selecting previously unselected package dctrl-tools. 357s Preparing to unpack .../025-dctrl-tools_2.24-3build4_arm64.deb ... 357s Unpacking dctrl-tools (2.24-3build4) ... 357s Selecting previously unselected package fonts-dejavu-mono. 357s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8build1_all.deb ... 357s Unpacking fonts-dejavu-mono (2.37-8build1) ... 357s Selecting previously unselected package fonts-dejavu-core. 357s Preparing to unpack .../027-fonts-dejavu-core_2.37-8build1_all.deb ... 357s Unpacking fonts-dejavu-core (2.37-8build1) ... 357s Selecting previously unselected package fontconfig-config. 357s Preparing to unpack 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package fonts-mathjax. 358s Preparing to unpack .../033-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 358s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 358s Selecting previously unselected package gdal-data. 358s Preparing to unpack .../034-gdal-data_3.12.1+dfsg-1_all.deb ... 358s Unpacking gdal-data (3.12.1+dfsg-1) ... 358s Selecting previously unselected package gdal-plugins:arm64. 358s Preparing to unpack .../035-gdal-plugins_3.12.1+dfsg-1_arm64.deb ... 358s Unpacking gdal-plugins:arm64 (3.12.1+dfsg-1) ... 358s Selecting previously unselected package libgfortran5:arm64. 358s Preparing to unpack .../036-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 358s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 358s Selecting previously unselected package libgfortran-15-dev:arm64. 358s Preparing to unpack .../037-libgfortran-15-dev_15.2.0-12ubuntu1_arm64.deb ... 358s Unpacking libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 358s Selecting previously unselected package gfortran-15-aarch64-linux-gnu. 358s Preparing to unpack .../038-gfortran-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 358s Unpacking gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 358s Selecting previously unselected package gfortran-15. 358s Preparing to unpack .../039-gfortran-15_15.2.0-12ubuntu1_arm64.deb ... 358s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 358s Selecting previously unselected package gfortran-aarch64-linux-gnu. 358s Preparing to unpack .../040-gfortran-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 358s Unpacking gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 358s Selecting previously unselected package gfortran. 358s Preparing to unpack .../041-gfortran_4%3a15.2.0-4ubuntu1_arm64.deb ... 358s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 358s Selecting previously unselected package icu-devtools. 358s Preparing to unpack .../042-icu-devtools_78.2-1ubuntu1_arm64.deb ... 358s Unpacking icu-devtools (78.2-1ubuntu1) ... 358s Selecting previously unselected package javascript-common. 358s Preparing to unpack .../043-javascript-common_12+nmu1_all.deb ... 358s Unpacking javascript-common (12+nmu1) ... 358s Selecting previously unselected package libabsl20260107:arm64. 358s Preparing to unpack .../044-libabsl20260107_20260107.0-0ubuntu2_arm64.deb ... 358s Unpacking libabsl20260107:arm64 (20260107.0-0ubuntu2) ... 358s Selecting previously unselected package libaec0:arm64. 358s Preparing to unpack .../045-libaec0_1.1.5-1_arm64.deb ... 358s Unpacking libaec0:arm64 (1.1.5-1) ... 358s Selecting previously unselected package libaom3:arm64. 358s Preparing to unpack .../046-libaom3_3.13.1-2_arm64.deb ... 358s Unpacking libaom3:arm64 (3.13.1-2) ... 358s Selecting previously unselected package libblas3:arm64. 358s Preparing to unpack .../047-libblas3_3.12.1-7ubuntu1_arm64.deb ... 358s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 358s Selecting previously unselected package liblapack3:arm64. 359s Preparing to unpack .../048-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 359s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 359s Selecting previously unselected package libarpack2t64:arm64. 359s Preparing to unpack .../049-libarpack2t64_3.9.1-6_arm64.deb ... 359s Unpacking libarpack2t64:arm64 (3.9.1-6) ... 359s Selecting previously unselected package libsuperlu7:arm64. 359s Preparing to unpack .../050-libsuperlu7_7.0.1+dfsg1-2_arm64.deb ... 359s Unpacking libsuperlu7:arm64 (7.0.1+dfsg1-2) ... 359s Selecting previously unselected package libarmadillo15. 359s Preparing to unpack .../051-libarmadillo15_1%3a15.2.1+dfsg-2_arm64.deb ... 359s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 359s Selecting previously unselected package libdav1d7:arm64. 359s Preparing to unpack .../052-libdav1d7_1.5.3-1_arm64.deb ... 359s Unpacking libdav1d7:arm64 (1.5.3-1) ... 359s Selecting previously unselected package libgav1-2:arm64. 359s Preparing to unpack .../053-libgav1-2_0.20.0-2build1_arm64.deb ... 359s Unpacking libgav1-2:arm64 (0.20.0-2build1) ... 359s Selecting previously unselected package libjpeg-turbo8:arm64. 359s Preparing to unpack .../054-libjpeg-turbo8_2.1.5-4ubuntu2_arm64.deb ... 359s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 359s Selecting previously unselected package libjpeg8:arm64. 359s Preparing to unpack .../055-libjpeg8_8c-2ubuntu11_arm64.deb ... 359s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 359s Selecting previously unselected package libyuv0:arm64. 359s Preparing to unpack .../056-libyuv0_0.0.1922.20260106-1_arm64.deb ... 359s Unpacking libyuv0:arm64 (0.0.1922.20260106-1) ... 359s Selecting previously unselected package libavif16:arm64. 359s Preparing to unpack .../057-libavif16_1.3.0-1ubuntu3_arm64.deb ... 359s Unpacking libavif16:arm64 (1.3.0-1ubuntu3) ... 359s Selecting previously unselected package libblas-dev:arm64. 359s Preparing to unpack .../058-libblas-dev_3.12.1-7ubuntu1_arm64.deb ... 359s Unpacking libblas-dev:arm64 (3.12.1-7ubuntu1) ... 359s Selecting previously unselected package libsnappy1v5:arm64. 359s Preparing to unpack .../059-libsnappy1v5_1.2.2-2_arm64.deb ... 359s Unpacking libsnappy1v5:arm64 (1.2.2-2) ... 359s Selecting previously unselected package libblosc1:arm64. 359s Preparing to unpack .../060-libblosc1_1.21.5+ds-2_arm64.deb ... 359s Unpacking libblosc1:arm64 (1.21.5+ds-2) ... 359s Selecting previously unselected package libbz2-dev:arm64. 359s Preparing to unpack .../061-libbz2-dev_1.0.8-6build2_arm64.deb ... 359s Unpacking libbz2-dev:arm64 (1.0.8-6build2) ... 359s Selecting previously unselected package libpixman-1-0:arm64. 359s Preparing to unpack .../062-libpixman-1-0_0.46.4-1_arm64.deb ... 359s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 359s Selecting previously unselected package libxcb-render0:arm64. 359s Preparing to unpack .../063-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 359s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 359s Selecting previously unselected package libxcb-shm0:arm64. 359s 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Unpacking libde265-0:arm64 (1.0.16-1build1) ... 359s Selecting previously unselected package libdeflate0:arm64. 360s Preparing to unpack .../070-libdeflate0_1.23-2_arm64.deb ... 360s Unpacking libdeflate0:arm64 (1.23-2) ... 360s Selecting previously unselected package libdeflate-dev:arm64. 360s Preparing to unpack .../071-libdeflate-dev_1.23-2_arm64.deb ... 360s Unpacking libdeflate-dev:arm64 (1.23-2) ... 360s Selecting previously unselected package libfyba0t64:arm64. 360s Preparing to unpack .../072-libfyba0t64_4.1.1-11build2_arm64.deb ... 360s Unpacking libfyba0t64:arm64 (4.1.1-11build2) ... 360s Selecting previously unselected package libminizip1t64:arm64. 360s Preparing to unpack .../073-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 360s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 360s Selecting previously unselected package libfreexl1:arm64. 360s Preparing to unpack .../074-libfreexl1_2.0.0-1build3_arm64.deb ... 360s Unpacking libfreexl1:arm64 (2.0.0-1build3) ... 360s Selecting previously unselected package libgeos3.14.1:arm64. 360s Preparing to unpack .../075-libgeos3.14.1_3.14.1-2_arm64.deb ... 360s Unpacking libgeos3.14.1:arm64 (3.14.1-2) ... 360s Selecting previously unselected package libgeos-c1t64:arm64. 360s Preparing to unpack .../076-libgeos-c1t64_3.14.1-2_arm64.deb ... 360s Unpacking libgeos-c1t64:arm64 (3.14.1-2) ... 360s Selecting previously unselected package proj-data. 360s Preparing to unpack .../077-proj-data_9.7.1-1_all.deb ... 360s Unpacking proj-data (9.7.1-1) ... 360s Selecting previously unselected package libjbig0:arm64. 360s Preparing to unpack .../078-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 360s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 360s Selecting previously unselected package liblerc4:arm64. 360s Preparing to unpack .../079-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 360s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 360s Selecting previously unselected package libsharpyuv0:arm64. 360s Preparing to unpack .../080-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 360s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 360s Selecting previously unselected package libwebp7:arm64. 360s Preparing to unpack .../081-libwebp7_1.5.0-0.1build1_arm64.deb ... 360s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 360s Selecting previously unselected package libtiff6:arm64. 360s Preparing to unpack .../082-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 360s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 360s Selecting previously unselected package libproj25:arm64. 360s Preparing to unpack .../083-libproj25_9.7.1-1_arm64.deb ... 360s Unpacking libproj25:arm64 (9.7.1-1) ... 360s Selecting previously unselected package libgeotiff5:arm64. 360s Preparing to unpack .../084-libgeotiff5_1.7.4-1_arm64.deb ... 360s Unpacking libgeotiff5:arm64 (1.7.4-1) ... 360s Selecting previously unselected package libgif7:arm64. 360s Preparing to unpack .../085-libgif7_5.2.2-1ubuntu3_arm64.deb ... 360s Unpacking libgif7:arm64 (5.2.2-1ubuntu3) ... 360s Selecting previously unselected package libsz2:arm64. 360s Preparing to unpack .../086-libsz2_1.1.5-1_arm64.deb ... 360s Unpacking libsz2:arm64 (1.1.5-1) ... 360s Selecting previously unselected package libhdf4-0:arm64. 360s Preparing to unpack .../087-libhdf4-0_4.3.1-2_arm64.deb ... 360s Unpacking libhdf4-0:arm64 (4.3.1-2) ... 360s Selecting previously unselected package libhdf5-310:arm64. 360s Preparing to unpack .../088-libhdf5-310_1.14.6+repack-2_arm64.deb ... 360s Unpacking libhdf5-310:arm64 (1.14.6+repack-2) ... 360s Selecting previously unselected package libheif-plugin-aomdec:arm64. 360s Preparing to unpack .../089-libheif-plugin-aomdec_1.21.2-1_arm64.deb ... 360s Unpacking libheif-plugin-aomdec:arm64 (1.21.2-1) ... 360s Selecting previously unselected package libheif-plugin-libde265:arm64. 361s Preparing to unpack .../090-libheif-plugin-libde265_1.21.2-1_arm64.deb ... 361s Unpacking libheif-plugin-libde265:arm64 (1.21.2-1) ... 361s Selecting previously unselected package libheif1:arm64. 361s Preparing to unpack .../091-libheif1_1.21.2-1_arm64.deb ... 361s Unpacking libheif1:arm64 (1.21.2-1) ... 361s Selecting previously unselected package libhwy1t64:arm64. 361s Preparing to unpack .../092-libhwy1t64_1.3.0-2_arm64.deb ... 361s Unpacking libhwy1t64:arm64 (1.3.0-2) ... 361s Selecting previously unselected package liblcms2-2:arm64. 361s Preparing to unpack .../093-liblcms2-2_2.17-1_arm64.deb ... 361s Unpacking liblcms2-2:arm64 (2.17-1) ... 361s Selecting previously unselected package libjxl0.11:arm64. 361s Preparing to unpack .../094-libjxl0.11_0.11.1-6ubuntu1_arm64.deb ... 361s Unpacking libjxl0.11:arm64 (0.11.1-6ubuntu1) ... 361s Selecting previously unselected package liburiparser1:arm64. 361s Preparing to unpack .../095-liburiparser1_0.9.8+dfsg-2_arm64.deb ... 361s Unpacking liburiparser1:arm64 (0.9.8+dfsg-2) ... 361s Selecting previously unselected package libkmlbase1t64:arm64. 361s Preparing to unpack .../096-libkmlbase1t64_1.3.0-13_arm64.deb ... 361s Unpacking libkmlbase1t64:arm64 (1.3.0-13) ... 361s Selecting previously unselected package libkmldom1t64:arm64. 361s Preparing to unpack .../097-libkmldom1t64_1.3.0-13_arm64.deb ... 361s Unpacking libkmldom1t64:arm64 (1.3.0-13) ... 361s Selecting previously unselected package libkmlengine1t64:arm64. 361s Preparing to unpack .../098-libkmlengine1t64_1.3.0-13_arm64.deb ... 361s Unpacking libkmlengine1t64:arm64 (1.3.0-13) ... 361s Selecting previously unselected package libmuparser2v5:arm64. 361s Preparing to unpack .../099-libmuparser2v5_2.3.4-2_arm64.deb ... 361s Unpacking libmuparser2v5:arm64 (2.3.4-2) ... 361s Selecting previously unselected package mysql-common. 361s Preparing to unpack .../100-mysql-common_5.8+1.1.1ubuntu2_all.deb ... 361s Unpacking mysql-common (5.8+1.1.1ubuntu2) ... 361s Selecting previously unselected package libmysqlclient24:arm64. 361s Preparing to unpack .../101-libmysqlclient24_8.4.8-0ubuntu1_arm64.deb ... 361s Unpacking libmysqlclient24:arm64 (8.4.8-0ubuntu1) ... 361s Selecting previously unselected package libhdf5-hl-310:arm64. 361s Preparing to unpack .../102-libhdf5-hl-310_1.14.6+repack-2_arm64.deb ... 361s Unpacking libhdf5-hl-310:arm64 (1.14.6+repack-2) ... 361s Selecting previously unselected package libnetcdf22:arm64. 361s Preparing to unpack .../103-libnetcdf22_1%3a4.9.3-1build1_arm64.deb ... 361s Unpacking libnetcdf22:arm64 (1:4.9.3-1build1) ... 361s Selecting previously unselected package libltdl7:arm64. 361s Preparing to unpack .../104-libltdl7_2.5.4-9_arm64.deb ... 361s Unpacking libltdl7:arm64 (2.5.4-9) ... 361s Selecting previously unselected package libodbc2:arm64. 361s Preparing to unpack .../105-libodbc2_2.3.14-1_arm64.deb ... 361s Unpacking libodbc2:arm64 (2.3.14-1) ... 361s Selecting previously unselected package unixodbc-common. 361s Preparing to unpack .../106-unixodbc-common_2.3.14-1_all.deb ... 361s Unpacking unixodbc-common (2.3.14-1) ... 361s Selecting previously unselected package libodbcinst2:arm64. 361s Preparing to unpack .../107-libodbcinst2_2.3.14-1_arm64.deb ... 361s Unpacking libodbcinst2:arm64 (2.3.14-1) ... 361s Selecting previously unselected package libopenjp2-7:arm64. 361s Preparing to unpack .../108-libopenjp2-7_2.5.4-1_arm64.deb ... 361s Unpacking libopenjp2-7:arm64 (2.5.4-1) ... 361s Selecting previously unselected package libgpgmepp6t64:arm64. 361s Preparing to unpack .../109-libgpgmepp6t64_1.24.2-3ubuntu2_arm64.deb ... 361s Unpacking libgpgmepp6t64:arm64 (1.24.2-3ubuntu2) ... 361s Selecting previously unselected package libpoppler147:arm64. 361s Preparing to unpack .../110-libpoppler147_25.03.0-11.1_arm64.deb ... 361s Unpacking libpoppler147:arm64 (25.03.0-11.1) ... 362s Selecting previously unselected package libpq5:arm64. 362s Preparing to unpack .../111-libpq5_18.1-2_arm64.deb ... 362s Unpacking libpq5:arm64 (18.1-2) ... 362s Selecting previously unselected package libqhull-r8.0:arm64. 362s Preparing to unpack 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363s Selecting previously unselected package libjs-prettify. 363s Preparing to unpack .../138-libjs-prettify_2015.12.04+dfsg-2_all.deb ... 363s Unpacking libjs-prettify (2015.12.04+dfsg-2) ... 363s Selecting previously unselected package liblapack-dev:arm64. 363s Preparing to unpack .../139-liblapack-dev_3.12.1-7ubuntu1_arm64.deb ... 363s Unpacking liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 364s Selecting previously unselected package liblua5.4-0:arm64. 364s Preparing to unpack .../140-liblua5.4-0_5.4.8-1_arm64.deb ... 364s Unpacking liblua5.4-0:arm64 (5.4.8-1) ... 364s Selecting previously unselected package libncurses-dev:arm64. 364s Preparing to unpack .../141-libncurses-dev_6.6+20251231-1_arm64.deb ... 364s Unpacking libncurses-dev:arm64 (6.6+20251231-1) ... 364s Selecting previously unselected package libthai-data. 364s Preparing to unpack .../142-libthai-data_0.1.30-1_all.deb ... 364s Unpacking libthai-data (0.1.30-1) ... 364s Selecting previously unselected package libthai0:arm64. 364s Preparing to unpack .../143-libthai0_0.1.30-1_arm64.deb ... 364s Unpacking libthai0:arm64 (0.1.30-1) ... 364s Selecting previously unselected package libpango-1.0-0:arm64. 364s Preparing to unpack .../144-libpango-1.0-0_1.57.0-1_arm64.deb ... 364s Unpacking libpango-1.0-0:arm64 (1.57.0-1) ... 364s Selecting previously unselected package libpangoft2-1.0-0:arm64. 364s Preparing to unpack .../145-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 364s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 364s Selecting previously unselected package libpangocairo-1.0-0:arm64. 364s Preparing to unpack .../146-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 364s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 364s Selecting previously unselected package libpaper2:arm64. 364s Preparing to unpack .../147-libpaper2_2.2.5-0.3build1_arm64.deb ... 364s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 364s Selecting previously unselected package libpaper-utils. 364s Preparing to unpack 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libpkgconf3:arm64 (1.8.1-4build1) ... 364s Selecting previously unselected package zlib1g-dev:arm64. 364s Preparing to unpack .../154-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 364s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 364s Selecting previously unselected package libpng-dev:arm64. 364s Preparing to unpack .../155-libpng-dev_1.6.54-1_arm64.deb ... 364s Unpacking libpng-dev:arm64 (1.6.54-1) ... 364s Selecting previously unselected package libreadline-dev:arm64. 364s Preparing to unpack .../156-libreadline-dev_8.3-3_arm64.deb ... 364s Unpacking libreadline-dev:arm64 (8.3-3) ... 364s Selecting previously unselected package libsm6:arm64. 364s Preparing to unpack .../157-libsm6_2%3a1.2.6-1_arm64.deb ... 364s Unpacking libsm6:arm64 (2:1.2.6-1) ... 364s Selecting previously unselected package libtcl8.6:arm64. 364s Preparing to unpack .../158-libtcl8.6_8.6.17+dfsg-1_arm64.deb ... 364s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1) ... 364s Selecting previously unselected package libxft2:arm64. 364s Preparing to unpack .../159-libxft2_2.3.6-1build2_arm64.deb ... 364s Unpacking libxft2:arm64 (2.3.6-1build2) ... 364s Selecting previously unselected package libxss1:arm64. 364s Preparing to unpack .../160-libxss1_1%3a1.2.3-1build4_arm64.deb ... 364s Unpacking libxss1:arm64 (1:1.2.3-1build4) ... 364s Selecting previously unselected package libtk8.6:arm64. 365s Preparing to unpack .../161-libtk8.6_8.6.17-1_arm64.deb ... 365s Unpacking libtk8.6:arm64 (8.6.17-1) ... 365s Selecting previously unselected package libudunits2-data. 365s Preparing to unpack .../162-libudunits2-data_2.2.28-8_all.deb ... 365s Unpacking libudunits2-data (2.2.28-8) ... 365s Selecting previously unselected package libudunits2-0:arm64. 365s Preparing to unpack .../163-libudunits2-0_2.2.28-8_arm64.deb ... 365s Unpacking libudunits2-0:arm64 (2.2.28-8) ... 365s Selecting previously unselected package libxt6t64:arm64. 365s Preparing to unpack .../164-libxt6t64_1%3a1.2.1-1.3_arm64.deb ... 365s Unpacking libxt6t64:arm64 (1:1.2.1-1.3) ... 365s Selecting previously unselected package libzstd-dev:arm64. 365s Preparing to unpack .../165-libzstd-dev_1.5.7+dfsg-2_arm64.deb ... 365s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-2) ... 365s Selecting previously unselected package node-bootstrap-sass. 365s Preparing to unpack .../166-node-bootstrap-sass_3.4.3-2_all.deb ... 365s Unpacking node-bootstrap-sass (3.4.3-2) ... 365s Selecting previously unselected package node-html5shiv. 365s Preparing to unpack .../167-node-html5shiv_3.7.3+dfsg-5_all.deb ... 365s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 365s Selecting previously unselected package node-normalize.css. 365s Preparing to unpack .../168-node-normalize.css_8.0.1-5.1_all.deb ... 365s Unpacking node-normalize.css (8.0.1-5.1) ... 365s Selecting previously unselected package pandoc-data. 365s Preparing to unpack .../169-pandoc-data_3.1.11.1-3build1_all.deb ... 365s Unpacking pandoc-data (3.1.11.1-3build1) ... 365s Selecting previously unselected package pandoc. 365s Preparing to unpack .../170-pandoc_3.1.11.1+ds-4_arm64.deb ... 365s Unpacking pandoc (3.1.11.1+ds-4) ... 366s Selecting previously unselected package zip. 366s Preparing to unpack .../171-zip_3.0-15ubuntu2_arm64.deb ... 366s Unpacking zip (3.0-15ubuntu2) ... 366s Selecting previously unselected package unzip. 366s Preparing to unpack .../172-unzip_6.0-29ubuntu1_arm64.deb ... 366s Unpacking unzip (6.0-29ubuntu1) ... 366s Selecting previously unselected package xdg-utils. 366s Preparing to unpack .../173-xdg-utils_1.2.1-2ubuntu2_all.deb ... 366s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 366s Selecting previously unselected package r-base-core. 366s Preparing to unpack .../174-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 366s Unpacking r-base-core (4.5.2-1ubuntu2) ... 366s Selecting previously unselected package liblzma-dev:arm64. 366s Preparing to unpack .../175-liblzma-dev_5.8.2-2_arm64.deb ... 366s Unpacking liblzma-dev:arm64 (5.8.2-2) ... 366s Selecting previously unselected package pkgconf-bin. 366s Preparing to unpack .../176-pkgconf-bin_1.8.1-4build1_arm64.deb ... 366s Unpacking pkgconf-bin (1.8.1-4build1) ... 366s Selecting previously unselected package pkgconf:arm64. 366s Preparing to unpack .../177-pkgconf_1.8.1-4build1_arm64.deb ... 366s Unpacking pkgconf:arm64 (1.8.1-4build1) ... 366s Selecting previously unselected package libtirpc-dev:arm64. 366s Preparing to unpack .../178-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 366s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 366s Selecting previously unselected package r-base-dev. 366s Preparing to unpack .../179-r-base-dev_4.5.2-1ubuntu2_all.deb ... 366s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 366s Selecting previously unselected package pkg-r-autopkgtest. 366s Preparing to unpack .../180-pkg-r-autopkgtest_20250812_all.deb ... 366s Unpacking pkg-r-autopkgtest (20250812) ... 366s Selecting previously unselected package r-cran-abind. 366s Preparing to unpack .../181-r-cran-abind_1.4-8-1build1_all.deb ... 366s Unpacking r-cran-abind (1.4-8-1build1) ... 367s Selecting previously unselected package r-cran-cli. 367s Preparing to unpack .../182-r-cran-cli_3.6.4-1_arm64.deb ... 367s Unpacking r-cran-cli (3.6.4-1) ... 367s Selecting previously unselected package r-cran-generics. 367s Preparing to unpack .../183-r-cran-generics_0.1.4-1_all.deb ... 367s Unpacking r-cran-generics (0.1.4-1) ... 367s Selecting previously unselected package r-cran-glue. 367s Preparing to unpack .../184-r-cran-glue_1.8.0-1_arm64.deb ... 367s Unpacking r-cran-glue (1.8.0-1) ... 367s Selecting previously unselected package r-cran-rlang. 367s Preparing to unpack .../185-r-cran-rlang_1.1.5-3_arm64.deb ... 367s Unpacking r-cran-rlang (1.1.5-3) ... 367s Selecting previously unselected package r-cran-lifecycle. 367s Preparing to unpack .../186-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 367s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 367s Selecting previously unselected package r-cran-magrittr. 367s Preparing to unpack .../187-r-cran-magrittr_2.0.3-1_arm64.deb ... 367s Unpacking r-cran-magrittr (2.0.3-1) ... 367s Selecting previously unselected package r-cran-utf8. 367s Preparing to unpack .../188-r-cran-utf8_1.2.4-1_arm64.deb ... 367s Unpacking r-cran-utf8 (1.2.4-1) ... 367s Selecting previously unselected package r-cran-vctrs. 367s Preparing to unpack .../189-r-cran-vctrs_0.6.5-1_arm64.deb ... 367s Unpacking r-cran-vctrs (0.6.5-1) ... 367s Selecting previously unselected package r-cran-pillar. 367s Preparing to unpack .../190-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 367s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 367s Selecting previously unselected package r-cran-r6. 367s Preparing to unpack .../191-r-cran-r6_2.6.1-1_all.deb ... 367s Unpacking r-cran-r6 (2.6.1-1) ... 367s Selecting previously unselected package r-cran-fansi. 367s Preparing to unpack .../192-r-cran-fansi_1.0.6-2_arm64.deb ... 367s Unpacking r-cran-fansi (1.0.6-2) ... 367s Selecting previously unselected package r-cran-pkgconfig. 367s Preparing to unpack .../193-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 367s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 367s Selecting previously unselected package r-cran-tibble. 367s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 367s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 367s Selecting previously unselected package r-cran-withr. 367s Preparing to unpack .../195-r-cran-withr_3.0.2+dfsg-1_all.deb ... 367s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 367s Selecting previously unselected package r-cran-tidyselect. 367s Preparing to unpack .../196-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 367s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 367s Selecting previously unselected package r-cran-dplyr. 367s Preparing to unpack .../197-r-cran-dplyr_1.1.4-4_arm64.deb ... 367s Unpacking r-cran-dplyr (1.1.4-4) ... 367s Selecting previously unselected package r-cran-purrr. 367s Preparing to unpack .../198-r-cran-purrr_1.0.4-1_arm64.deb ... 367s Unpacking r-cran-purrr (1.0.4-1) ... 367s Selecting previously unselected package r-cran-mass. 367s Preparing to unpack .../199-r-cran-mass_7.3-65-1_arm64.deb ... 367s Unpacking r-cran-mass (7.3-65-1) ... 367s Selecting previously unselected package r-cran-class. 367s Preparing to unpack .../200-r-cran-class_7.3-23-1_arm64.deb ... 367s Unpacking r-cran-class (7.3-23-1) ... 367s Selecting previously unselected package r-cran-proxy. 367s Preparing to unpack .../201-r-cran-proxy_0.4-27-1_arm64.deb ... 367s Unpacking r-cran-proxy (0.4-27-1) ... 368s Selecting previously unselected package r-cran-e1071. 368s Preparing to unpack .../202-r-cran-e1071_1.7-17-1_arm64.deb ... 368s Unpacking r-cran-e1071 (1.7-17-1) ... 368s Selecting previously unselected package r-cran-kernsmooth. 368s Preparing to unpack .../203-r-cran-kernsmooth_2.23-26-1build1_arm64.deb ... 368s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 368s Selecting previously unselected package r-cran-classint. 368s Preparing to unpack .../204-r-cran-classint_0.4-11+dfsg-1_arm64.deb ... 368s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 368s Selecting previously unselected package r-cran-dbi. 368s Preparing to unpack .../205-r-cran-dbi_1.2.3-1build1_all.deb ... 368s Unpacking r-cran-dbi (1.2.3-1build1) ... 368s Selecting previously unselected package r-cran-littler. 368s Preparing to unpack .../206-r-cran-littler_0.3.21-2_arm64.deb ... 368s Unpacking r-cran-littler (0.3.21-2) ... 368s Selecting previously unselected package r-cran-pkgkitten. 368s Preparing to unpack .../207-r-cran-pkgkitten_0.2.4-1_all.deb ... 368s Unpacking r-cran-pkgkitten (0.2.4-1) ... 368s Selecting previously unselected package r-cran-rcpp. 368s Preparing to unpack .../208-r-cran-rcpp_1.1.0-1_arm64.deb ... 368s Unpacking r-cran-rcpp (1.1.0-1) ... 368s Selecting previously unselected package r-cran-wk. 368s Preparing to unpack .../209-r-cran-wk_0.9.4-1_arm64.deb ... 368s Unpacking r-cran-wk (0.9.4-1) ... 368s Selecting previously unselected package r-cran-s2. 368s Preparing to unpack .../210-r-cran-s2_1.1.9-1build1_arm64.deb ... 368s Unpacking r-cran-s2 (1.1.9-1build1) ... 368s Selecting previously unselected package r-cran-units. 368s Preparing to unpack .../211-r-cran-units_0.8-7+dfsg-2_arm64.deb ... 368s Unpacking r-cran-units (0.8-7+dfsg-2) ... 368s Selecting previously unselected package r-cran-sf. 368s Preparing to unpack .../212-r-cran-sf_1.0-19+dfsg-2build2_arm64.deb ... 368s Unpacking r-cran-sf (1.0-19+dfsg-2build2) ... 368s Selecting previously unselected package r-cran-areal. 368s Preparing to unpack .../213-r-cran-areal_0.1.8+dfsg-2_all.deb ... 368s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 368s Selecting previously unselected package r-cran-sys. 368s Preparing to unpack .../214-r-cran-sys_3.4.3-1_arm64.deb ... 368s Unpacking r-cran-sys (3.4.3-1) ... 368s Selecting previously unselected package r-cran-askpass. 368s Preparing to unpack .../215-r-cran-askpass_1.2.1-1_arm64.deb ... 368s Unpacking r-cran-askpass (1.2.1-1) ... 368s Selecting previously unselected package r-cran-base64enc. 368s Preparing to unpack .../216-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 368s Unpacking r-cran-base64enc (0.1-3-3build1) ... 368s Selecting previously unselected package r-cran-bdsmatrix. 368s Preparing to unpack .../217-r-cran-bdsmatrix_1.3-7-1_arm64.deb ... 368s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 368s Selecting previously unselected package r-cran-brio. 368s Preparing to unpack .../218-r-cran-brio_1.1.5-1_arm64.deb ... 368s Unpacking r-cran-brio (1.1.5-1) ... 368s Selecting previously unselected package r-cran-fastmap. 368s Preparing to unpack .../219-r-cran-fastmap_1.2.0-1_arm64.deb ... 368s Unpacking r-cran-fastmap (1.2.0-1) ... 368s Selecting previously unselected package r-cran-cachem. 368s Preparing to unpack .../220-r-cran-cachem_1.1.0-1_arm64.deb ... 368s Unpacking r-cran-cachem (1.1.0-1) ... 369s Selecting previously unselected package r-cran-digest. 369s Preparing to unpack .../221-r-cran-digest_0.6.39-1_arm64.deb ... 369s Unpacking r-cran-digest (0.6.39-1) ... 369s Selecting previously unselected package r-cran-htmltools. 369s Preparing to unpack .../222-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 369s Unpacking r-cran-htmltools (0.5.8.1-1) ... 369s Selecting previously unselected package r-cran-jquerylib. 369s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 369s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 369s Selecting previously unselected package r-cran-jsonlite. 369s Preparing to unpack .../224-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 369s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 369s Selecting previously unselected package r-cran-memoise. 369s Preparing to unpack .../225-r-cran-memoise_2.0.1-1build1_all.deb ... 369s Unpacking r-cran-memoise (2.0.1-1build1) ... 369s Selecting previously unselected package r-cran-mime. 369s Preparing to unpack .../226-r-cran-mime_0.12-2_arm64.deb ... 369s Unpacking r-cran-mime (0.12-2) ... 369s Selecting previously unselected package r-cran-fs. 369s Preparing to unpack .../227-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 369s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 369s Selecting previously unselected package r-cran-rappdirs. 369s Preparing to unpack .../228-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 369s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 369s Selecting previously unselected package r-cran-sass. 369s Preparing to unpack .../229-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 369s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 369s Selecting previously unselected package r-cran-bslib. 369s Preparing to unpack .../230-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 369s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 369s Selecting previously unselected package r-cran-cairo. 369s Preparing to unpack .../231-r-cran-cairo_1.6-2-1_arm64.deb ... 369s Unpacking r-cran-cairo (1.6-2-1) ... 369s Selecting previously unselected package r-cran-ps. 369s Preparing to unpack .../232-r-cran-ps_1.9.0-1_arm64.deb ... 369s Unpacking r-cran-ps (1.9.0-1) ... 369s Selecting previously unselected package r-cran-processx. 369s Preparing to unpack .../233-r-cran-processx_3.8.6-1_arm64.deb ... 369s Unpacking r-cran-processx (3.8.6-1) ... 369s Selecting previously unselected package r-cran-callr. 369s Preparing to unpack .../234-r-cran-callr_3.7.6-1_all.deb ... 369s Unpacking r-cran-callr (3.7.6-1) ... 369s Selecting previously unselected package r-cran-cftime. 369s Preparing to unpack .../235-r-cran-cftime_1.7.2-1_all.deb ... 369s Unpacking r-cran-cftime (1.7.2-1) ... 369s Selecting previously unselected package r-cran-cluster. 369s Preparing to unpack .../236-r-cran-cluster_2.1.8.1-1_arm64.deb ... 369s Unpacking r-cran-cluster (2.1.8.1-1) ... 369s Selecting previously unselected package r-cran-clue. 369s Preparing to unpack .../237-r-cran-clue_0.3-66-1_arm64.deb ... 369s Unpacking r-cran-clue (0.3-66-1) ... 369s Selecting previously unselected package r-cran-codetools. 369s Preparing to unpack .../238-r-cran-codetools_0.2-20-1build1_all.deb ... 369s Unpacking r-cran-codetools (0.2-20-1build1) ... 369s Selecting previously unselected package r-cran-collapse. 369s Preparing to unpack .../239-r-cran-collapse_2.1.0-1_arm64.deb ... 369s Unpacking r-cran-collapse (2.1.0-1) ... 370s Selecting previously unselected package r-cran-commonmark. 370s Preparing to unpack .../240-r-cran-commonmark_1.9.5-1_arm64.deb ... 370s Unpacking r-cran-commonmark (1.9.5-1) ... 370s Selecting previously unselected package r-cran-lazyeval. 370s Preparing to unpack .../241-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 370s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 370s Selecting previously unselected package r-cran-rex. 370s Preparing to unpack .../242-r-cran-rex_1.2.1-1build1_all.deb ... 370s Unpacking r-cran-rex (1.2.1-1build1) ... 370s Selecting previously unselected package r-cran-curl. 370s Preparing to unpack .../243-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 370s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 370s Selecting previously unselected package r-cran-openssl. 370s Preparing to unpack .../244-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 370s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 370s Selecting previously unselected package r-cran-httr. 370s Preparing to unpack .../245-r-cran-httr_1.4.7+dfsg-1_all.deb ... 370s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 370s Selecting previously unselected package r-cran-crayon. 370s Preparing to unpack .../246-r-cran-crayon_1.5.3-1_all.deb ... 370s Unpacking r-cran-crayon (1.5.3-1) ... 370s Selecting previously unselected package r-cran-yaml. 370s Preparing to unpack .../247-r-cran-yaml_2.3.10-1_arm64.deb ... 370s Unpacking r-cran-yaml (2.3.10-1) ... 370s Selecting previously unselected package r-cran-covr. 370s Preparing to unpack .../248-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 370s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 370s Selecting previously unselected package r-cran-cpp11. 370s Preparing to unpack .../249-r-cran-cpp11_0.5.3-1_all.deb ... 370s Unpacking r-cran-cpp11 (0.5.3-1) ... 370s Selecting previously unselected package r-cran-deldir. 370s Preparing to unpack .../250-r-cran-deldir_2.0-4-1build1_arm64.deb ... 370s Unpacking r-cran-deldir (2.0-4-1build1) ... 370s Selecting previously unselected package r-cran-desc. 370s Preparing to unpack .../251-r-cran-desc_1.4.3-1_all.deb ... 370s Unpacking r-cran-desc (1.4.3-1) ... 370s Selecting previously unselected package r-cran-diffobj. 370s Preparing to unpack .../252-r-cran-diffobj_0.3.5-1build1_arm64.deb ... 370s Unpacking r-cran-diffobj (0.3.5-1build1) ... 370s Selecting previously unselected package r-cran-evaluate. 370s Preparing to unpack .../253-r-cran-evaluate_1.0.3-1_all.deb ... 370s Unpacking r-cran-evaluate (1.0.3-1) ... 370s Selecting previously unselected package r-cran-farver. 370s Preparing to unpack .../254-r-cran-farver_2.1.2-1_arm64.deb ... 370s Unpacking r-cran-farver (2.1.2-1) ... 370s Selecting previously unselected package r-cran-fnn. 370s Preparing to unpack .../255-r-cran-fnn_1.1.4.1-1_arm64.deb ... 370s Unpacking r-cran-fnn (1.1.4.1-1) ... 370s Selecting previously unselected package r-cran-fontawesome. 370s Preparing to unpack .../256-r-cran-fontawesome_0.5.3-1_all.deb ... 370s Unpacking r-cran-fontawesome (0.5.3-1) ... 370s Selecting previously unselected package r-cran-formula. 370s Preparing to unpack .../257-r-cran-formula_1.2-5-1_all.deb ... 370s Unpacking r-cran-formula (1.2-5-1) ... 370s Selecting previously unselected package r-cran-globals. 370s Preparing to unpack .../258-r-cran-globals_0.18.0-1_all.deb ... 370s Unpacking r-cran-globals (0.18.0-1) ... 370s Selecting previously unselected package r-cran-listenv. 370s Preparing to unpack .../259-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 370s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 370s Selecting previously unselected package r-cran-parallelly. 370s Preparing to unpack .../260-r-cran-parallelly_1.42.0-1_arm64.deb ... 370s Unpacking r-cran-parallelly (1.42.0-1) ... 371s Selecting previously unselected package r-cran-future. 371s Preparing to unpack .../261-r-cran-future_1.34.0+dfsg-1_all.deb ... 371s Unpacking r-cran-future (1.34.0+dfsg-1) ... 371s Selecting previously unselected package r-cran-future.apply. 371s Preparing to unpack .../262-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 371s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 371s Selecting previously unselected package r-cran-gtable. 371s Preparing to unpack .../263-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 371s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 371s Selecting previously unselected package r-cran-isoband. 371s Preparing to unpack .../264-r-cran-isoband_0.2.7-1_arm64.deb ... 371s Unpacking r-cran-isoband (0.2.7-1) ... 371s Selecting previously unselected package r-cran-lattice. 371s Preparing to unpack .../265-r-cran-lattice_0.22-7-1_arm64.deb ... 371s Unpacking r-cran-lattice (0.22-7-1) ... 371s Selecting previously unselected package r-cran-nlme. 371s Preparing to unpack .../266-r-cran-nlme_3.1.168-1_arm64.deb ... 371s Unpacking r-cran-nlme (3.1.168-1) ... 371s Selecting previously unselected package r-cran-matrix. 371s Preparing to unpack .../267-r-cran-matrix_1.7-4-1_arm64.deb ... 371s Unpacking r-cran-matrix (1.7-4-1) ... 371s Selecting previously unselected package r-cran-mgcv. 371s Preparing to unpack .../268-r-cran-mgcv_1.9-4-1_arm64.deb ... 371s Unpacking r-cran-mgcv (1.9-4-1) ... 371s Selecting previously unselected package r-cran-labeling. 371s Preparing to unpack .../269-r-cran-labeling_0.4.3-1_all.deb ... 371s Unpacking r-cran-labeling (0.4.3-1) ... 371s Selecting previously unselected package r-cran-rcolorbrewer. 371s Preparing to unpack .../270-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 371s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 371s Selecting previously unselected package r-cran-viridislite. 371s Preparing to unpack .../271-r-cran-viridislite_0.4.2-2_all.deb ... 371s Unpacking r-cran-viridislite (0.4.2-2) ... 371s Selecting previously unselected package r-cran-scales. 371s Preparing to unpack .../272-r-cran-scales_1.4.0-1_all.deb ... 371s Unpacking r-cran-scales (1.4.0-1) ... 371s Selecting previously unselected package r-cran-ggplot2. 371s Preparing to unpack .../273-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 371s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 371s Selecting previously unselected package r-cran-tweenr. 371s Preparing to unpack .../274-r-cran-tweenr_2.0.3-1_arm64.deb ... 371s Unpacking r-cran-tweenr (2.0.3-1) ... 371s Selecting previously unselected package r-cran-polyclip. 371s Preparing to unpack .../275-r-cran-polyclip_1.10-7-1_arm64.deb ... 371s Unpacking r-cran-polyclip (1.10-7-1) ... 371s Selecting previously unselected package r-cran-systemfonts. 371s Preparing to unpack .../276-r-cran-systemfonts_1.2.1-1_arm64.deb ... 371s Unpacking r-cran-systemfonts (1.2.1-1) ... 371s Selecting previously unselected package r-cran-rcppeigen. 371s Preparing to unpack .../277-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 371s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 372s Selecting previously unselected package r-cran-ggforce. 372s Preparing to unpack .../278-r-cran-ggforce_0.4.2-1_arm64.deb ... 372s Unpacking r-cran-ggforce (0.4.2-1) ... 372s Selecting previously unselected package r-cran-stringi. 372s Preparing to unpack .../279-r-cran-stringi_1.8.4-1build2_arm64.deb ... 372s Unpacking r-cran-stringi (1.8.4-1build2) ... 372s Selecting previously unselected package r-cran-stringr. 372s Preparing to unpack .../280-r-cran-stringr_1.5.1-1_all.deb ... 372s Unpacking r-cran-stringr (1.5.1-1) ... 372s Selecting previously unselected package r-cran-ggthemes. 372s Preparing to unpack .../281-r-cran-ggthemes_5.2.0-1_all.deb ... 372s Unpacking r-cran-ggthemes (5.2.0-1) ... 372s Selecting previously unselected package r-cran-goftest. 372s Preparing to unpack .../282-r-cran-goftest_1.2-3-1build1_arm64.deb ... 372s Unpacking r-cran-goftest (1.2-3-1build1) ... 372s Selecting previously unselected package r-cran-gridextra. 372s Preparing to unpack .../283-r-cran-gridextra_2.3-3build2_all.deb ... 372s Unpacking r-cran-gridextra (2.3-3build2) ... 372s Selecting previously unselected package r-cran-xfun. 372s Preparing to unpack .../284-r-cran-xfun_0.55+dfsg-1_arm64.deb ... 372s Unpacking r-cran-xfun (0.55+dfsg-1) ... 372s Selecting previously unselected package r-cran-highr. 372s Preparing to unpack .../285-r-cran-highr_0.11+dfsg-1_all.deb ... 372s Unpacking r-cran-highr (0.11+dfsg-1) ... 372s Selecting previously unselected package r-cran-later. 372s Preparing to unpack .../286-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 372s Unpacking r-cran-later (1.4.1+dfsg-1) ... 372s Selecting previously unselected package r-cran-promises. 372s Preparing to unpack .../287-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 372s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 372s Selecting previously unselected package r-cran-httpuv. 372s Preparing to unpack .../288-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 372s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 372s Selecting previously unselected package r-cran-intervals. 372s Preparing to unpack .../289-r-cran-intervals_0.15.5-1_arm64.deb ... 372s Unpacking r-cran-intervals (0.15.5-1) ... 372s Selecting previously unselected package libjs-mathjax. 372s Preparing to unpack .../290-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 372s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 373s Selecting previously unselected package r-cran-knitr. 373s Preparing to unpack .../291-r-cran-knitr_1.51+dfsg-1_all.deb ... 373s Unpacking r-cran-knitr (1.51+dfsg-1) ... 373s Selecting previously unselected package r-cran-zoo. 373s Preparing to unpack .../292-r-cran-zoo_1.8-15-1_arm64.deb ... 373s Unpacking r-cran-zoo (1.8-15-1) ... 373s Selecting previously unselected package r-cran-lmtest. 373s Preparing to unpack .../293-r-cran-lmtest_0.9.40-1build1_arm64.deb ... 373s Unpacking r-cran-lmtest (0.9.40-1build1) ... 373s Selecting previously unselected package r-cran-lwgeom. 373s Preparing to unpack .../294-r-cran-lwgeom_0.2-14-1_arm64.deb ... 373s Unpacking r-cran-lwgeom (0.2-14-1) ... 373s Selecting previously unselected package r-cran-maps. 373s Preparing to unpack .../295-r-cran-maps_3.4.2.1-1_arm64.deb ... 373s Unpacking r-cran-maps (3.4.2.1-1) ... 373s Selecting previously unselected package r-cran-mapdata. 373s Preparing to unpack .../296-r-cran-mapdata_2.3.1-1_arm64.deb ... 373s Unpacking r-cran-mapdata (2.3.1-1) ... 373s Selecting previously unselected package r-cran-misctools. 373s Preparing to unpack .../297-r-cran-misctools_0.6-28-1_all.deb ... 373s Unpacking r-cran-misctools (0.6-28-1) ... 373s Selecting previously unselected package r-cran-sandwich. 373s Preparing to unpack .../298-r-cran-sandwich_3.1-1-1_all.deb ... 373s Unpacking r-cran-sandwich (3.1-1-1) ... 373s Selecting previously unselected package r-cran-maxlik. 373s Preparing to unpack .../299-r-cran-maxlik_1.5-2.2-1_all.deb ... 373s Unpacking r-cran-maxlik (1.5-2.2-1) ... 373s Selecting previously unselected package r-cran-rnetcdf. 373s Preparing to unpack .../300-r-cran-rnetcdf_2.11-1-1_arm64.deb ... 373s Unpacking r-cran-rnetcdf (2.11-1-1) ... 374s Selecting previously unselected package r-cran-tidyr. 374s Preparing to unpack .../301-r-cran-tidyr_1.3.1-1_arm64.deb ... 374s Unpacking r-cran-tidyr (1.3.1-1) ... 374s Selecting previously unselected package r-cran-ncmeta. 374s Preparing to unpack .../302-r-cran-ncmeta_0.4.0-1_all.deb ... 374s Unpacking r-cran-ncmeta (0.4.0-1) ... 374s Selecting previously unselected package r-cran-stars. 374s Preparing to unpack .../303-r-cran-stars_0.6-8-1_all.deb ... 374s Unpacking r-cran-stars (0.6-8-1) ... 374s Selecting previously unselected package r-cran-ncdfgeom. 374s Preparing to unpack .../304-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 374s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 374s Selecting previously unselected package r-cran-pbapply. 374s Preparing to unpack .../305-r-cran-pbapply_1.7-2-1_all.deb ... 374s Unpacking r-cran-pbapply (1.7-2-1) ... 374s Selecting previously unselected package r-cran-pcict. 374s Preparing to unpack .../306-r-cran-pcict_0.5-4.4-1_arm64.deb ... 374s Unpacking r-cran-pcict (0.5-4.4-1) ... 374s Selecting previously unselected package r-cran-pkgbuild. 374s Preparing to unpack .../307-r-cran-pkgbuild_1.4.8-1_all.deb ... 374s Unpacking r-cran-pkgbuild (1.4.8-1) ... 374s Selecting previously unselected package r-cran-rprojroot. 374s Preparing to unpack .../308-r-cran-rprojroot_2.1.1-1_all.deb ... 374s Unpacking r-cran-rprojroot (2.1.1-1) ... 374s Selecting previously unselected package r-cran-pkgload. 374s Preparing to unpack .../309-r-cran-pkgload_1.4.1-1_all.deb ... 374s Unpacking r-cran-pkgload (1.4.1-1) ... 374s Selecting previously unselected package r-cran-rbibutils. 374s Preparing to unpack .../310-r-cran-rbibutils_2.3-1_arm64.deb ... 374s Unpacking r-cran-rbibutils (2.3-1) ... 374s Selecting previously unselected package r-cran-rdpack. 374s Preparing to unpack .../311-r-cran-rdpack_2.6.3-1_all.deb ... 374s Unpacking r-cran-rdpack (2.6.3-1) ... 374s Selecting previously unselected package r-cran-plm. 374s Preparing to unpack .../312-r-cran-plm_2.6-7-1_all.deb ... 374s Unpacking r-cran-plm (2.6-7-1) ... 374s Selecting previously unselected package r-cran-praise. 374s Preparing to unpack .../313-r-cran-praise_1.0.0-4build2_all.deb ... 374s Unpacking r-cran-praise (1.0.0-4build2) ... 374s Selecting previously unselected package r-cran-randomforest. 374s Preparing to unpack .../314-r-cran-randomforest_4.7-1.2-1_arm64.deb ... 374s Unpacking r-cran-randomforest (4.7-1.2-1) ... 374s Selecting previously unselected package r-cran-sp. 374s Preparing to unpack .../315-r-cran-sp_1%3a2.2-0+dfsg-1_arm64.deb ... 374s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 374s Selecting previously unselected package r-cran-terra. 374s Preparing to unpack .../316-r-cran-terra_1.8-70-1build2_arm64.deb ... 374s Unpacking r-cran-terra (1.8-70-1build2) ... 375s Selecting previously unselected package r-cran-raster. 375s Preparing to unpack .../317-r-cran-raster_3.6-31-2_arm64.deb ... 375s Unpacking r-cran-raster (3.6-31-2) ... 375s Selecting previously unselected package r-cran-tinytex. 375s Preparing to unpack .../318-r-cran-tinytex_0.58-1_all.deb ... 375s Unpacking r-cran-tinytex (0.58-1) ... 375s Selecting previously unselected package libjs-modernizr. 375s Preparing to unpack .../319-libjs-modernizr_3.13.0-0.1build1_all.deb ... 375s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 375s Selecting previously unselected package r-cran-xtable. 375s Preparing to unpack .../320-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 375s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 375s Selecting previously unselected package r-cran-sourcetools. 375s Preparing to unpack .../321-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 375s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 375s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 375s Preparing to unpack .../322-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 375s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 375s Selecting previously unselected package r-cran-shiny. 375s Preparing to unpack .../323-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 375s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 375s Selecting previously unselected package r-cran-rmarkdown. 375s Preparing to unpack .../324-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 375s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 375s Selecting previously unselected package r-cran-survival. 375s Preparing to unpack .../325-r-cran-survival_3.8-6-1_arm64.deb ... 375s Unpacking r-cran-survival (3.8-6-1) ... 375s Selecting previously unselected package r-cran-rpart. 375s Preparing to unpack .../326-r-cran-rpart_4.1.24-1_arm64.deb ... 375s Unpacking r-cran-rpart (4.1.24-1) ... 375s Selecting previously unselected package r-cran-xts. 375s Preparing to unpack .../327-r-cran-xts_0.14.1-1_arm64.deb ... 375s Unpacking r-cran-xts (0.14.1-1) ... 375s Selecting previously unselected package r-cran-spacetime. 375s Preparing to unpack .../328-r-cran-spacetime_1.3-3-2_all.deb ... 375s Unpacking r-cran-spacetime (1.3-3-2) ... 375s Selecting previously unselected package r-cran-spatstat.utils. 375s Preparing to unpack .../329-r-cran-spatstat.utils_3.1-3-1_arm64.deb ... 375s Unpacking r-cran-spatstat.utils (3.1-3-1) ... 375s Selecting previously unselected package r-cran-spatstat.data. 375s Preparing to unpack .../330-r-cran-spatstat.data_3.1-6-1_all.deb ... 375s Unpacking r-cran-spatstat.data (3.1-6-1) ... 375s Selecting previously unselected package r-cran-spatstat.univar. 375s Preparing to unpack .../331-r-cran-spatstat.univar_3.1-2-1_arm64.deb ... 375s Unpacking r-cran-spatstat.univar (3.1-2-1) ... 375s Selecting previously unselected package r-cran-spatstat.geom. 375s Preparing to unpack .../332-r-cran-spatstat.geom_3.3-6-1_arm64.deb ... 375s Unpacking r-cran-spatstat.geom (3.3-6-1) ... 376s Selecting previously unselected package r-cran-spatstat.random. 376s Preparing to unpack .../333-r-cran-spatstat.random_3.3-3-1_arm64.deb ... 376s Unpacking r-cran-spatstat.random (3.3-3-1) ... 376s Selecting previously unselected package r-cran-tensor. 376s Preparing to unpack .../334-r-cran-tensor_1.5-4build1_all.deb ... 376s Unpacking r-cran-tensor (1.5-4build1) ... 376s Selecting previously unselected package r-cran-spatstat.sparse. 376s Preparing to unpack .../335-r-cran-spatstat.sparse_3.1-0-1_arm64.deb ... 376s Unpacking r-cran-spatstat.sparse (3.1-0-1) ... 376s Selecting previously unselected package r-cran-spatstat.explore. 376s Preparing to unpack .../336-r-cran-spatstat.explore_3.3-4-1_arm64.deb ... 376s Unpacking r-cran-spatstat.explore (3.3-4-1) ... 376s Selecting previously unselected package r-cran-spatstat.model. 376s Preparing to unpack .../337-r-cran-spatstat.model_3.3-4-1_arm64.deb ... 376s Unpacking r-cran-spatstat.model (3.3-4-1) ... 376s Selecting previously unselected package r-cran-spatstat.linnet. 376s Preparing to unpack .../338-r-cran-spatstat.linnet_3.2-5-1_arm64.deb ... 376s Unpacking r-cran-spatstat.linnet (3.2-5-1) ... 376s Selecting previously unselected package r-cran-spatstat. 376s Preparing to unpack .../339-r-cran-spatstat_3.3-1-1_arm64.deb ... 376s Unpacking r-cran-spatstat (3.3-1-1) ... 376s Selecting previously unselected package r-cran-waldo. 376s Preparing to unpack .../340-r-cran-waldo_0.6.2-1_all.deb ... 376s Unpacking r-cran-waldo (0.6.2-1) ... 376s Selecting previously unselected package r-cran-testthat. 376s Preparing to unpack .../341-r-cran-testthat_3.2.3-1_arm64.deb ... 376s Unpacking r-cran-testthat (3.2.3-1) ... 376s Selecting previously unselected package r-cran-viridis. 376s 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r-cran-ncdfgeom (1.1.6+dfsg-1) ... 380s Processing triggers for libc-bin (2.42-2ubuntu4) ... 380s Processing triggers for man-db (2.13.1-1) ... 381s Processing triggers for install-info (7.2-5) ... 384s autopkgtest [17:36:44]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 384s autopkgtest [17:36:44]: test pkg-r-autopkgtest: [----------------------- 384s Test: Try to load the R library stars 384s 384s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 384s Copyright (C) 2025 The R Foundation for Statistical Computing 384s Platform: aarch64-unknown-linux-gnu 384s 384s R is free software and comes with ABSOLUTELY NO WARRANTY. 384s You are welcome to redistribute it under certain conditions. 384s Type 'license()' or 'licence()' for distribution details. 384s 384s R is a collaborative project with many contributors. 384s Type 'contributors()' for more information and 384s 'citation()' on how to cite R or R packages in publications. 384s 384s Type 'demo()' for some demos, 'help()' for on-line help, or 384s 'help.start()' for an HTML browser interface to help. 384s Type 'q()' to quit R. 384s 384s > library('stars') 384s Loading required package: abind 384s Loading required package: sf 385s Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.0; sf_use_s2() is TRUE 385s > 385s autopkgtest [17:36:45]: test pkg-r-autopkgtest: -----------------------] 386s autopkgtest [17:36:46]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 386s pkg-r-autopkgtest PASS 386s autopkgtest [17:36:46]: @@@@@@@@@@@@@@@@@@@@ summary 386s run-unit-test PASS 386s pkg-r-autopkgtest PASS