0s autopkgtest [17:51:36]: starting date and time: 2026-01-29 17:51:36+0000 0s autopkgtest [17:51:36]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [17:51:36]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yd_785xy/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-raster --apt-upgrade r-cran-stars --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-raster/3.6-32-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-arm64-14.secgroup --name adt-resolute-arm64-r-cran-stars-20260129-175136-juju-7f2275-prod-proposed-migration-environment-20-6297ae51-d263-4146-ba71-155789ac18ce --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-arm64-r-cran-stars-20260129-175136-juju-7f2275-prod-proposed-migration-environment-20-6297ae51-d263-4146-ba71-155789ac18ce from image adt/ubuntu-resolute-arm64-server-20260128.img (UUID 10e9cd8e-6c32-4761-bbae-8581f2bd4c6f)... 69s autopkgtest [17:52:45]: testbed dpkg architecture: arm64 69s autopkgtest [17:52:45]: testbed apt version: 3.1.14 70s autopkgtest [17:52:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup 70s autopkgtest [17:52:46]: testbed release detected to be: None 71s autopkgtest [17:52:47]: updating testbed package index (apt update) 71s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 71s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 71s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 71s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 71s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1073 kB] 71s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [25.4 kB] 71s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2820 B] 71s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [106 kB] 71s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [125 kB] 71s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [4268 B] 71s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [12.3 kB] 72s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [328 B] 72s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [858 kB] 72s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [21.9 kB] 72s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [19.4 kB] 72s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [576 B] 74s Fetched 2374 kB in 1s (2689 kB/s) 75s Reading package lists... 76s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 76s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 76s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 76s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 77s Reading package lists... 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 78s Calculating upgrade... 78s The following packages will be upgraded: 78s libsgutils2-1.48 liburcu8t64 libxcb1 sg3-utils sg3-utils-udev tzdata 78s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 78s Need to get 1437 kB of archives. 78s After this operation, 64.5 kB disk space will be freed. 78s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 tzdata all 2025c-3ubuntu3 [199 kB] 78s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 liburcu8t64 arm64 0.15.6-1 [64.8 kB] 78s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb1 arm64 1.17.0-2ubuntu1 [49.2 kB] 78s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libsgutils2-1.48 arm64 1.48-3ubuntu2 [116 kB] 78s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 sg3-utils arm64 1.48-3ubuntu2 [1001 kB] 79s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 sg3-utils-udev all 1.48-3ubuntu2 [6610 B] 79s dpkg-preconfigure: unable to re-open stdin: No such file or directory 79s Fetched 1437 kB in 0s (3222 kB/s) 79s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 79s Preparing to unpack .../0-tzdata_2025c-3ubuntu3_all.deb ... 79s Unpacking tzdata (2025c-3ubuntu3) over (2025c-3ubuntu2) ... 79s Preparing to unpack .../1-liburcu8t64_0.15.6-1_arm64.deb ... 80s Unpacking liburcu8t64:arm64 (0.15.6-1) over (0.15.5-1) ... 80s Preparing to unpack .../2-libxcb1_1.17.0-2ubuntu1_arm64.deb ... 80s Unpacking libxcb1:arm64 (1.17.0-2ubuntu1) over (1.17.0-2build1) ... 80s Preparing to unpack .../3-libsgutils2-1.48_1.48-3ubuntu2_arm64.deb ... 80s Unpacking libsgutils2-1.48:arm64 (1.48-3ubuntu2) over (1.48-3ubuntu1) ... 80s Preparing to unpack .../4-sg3-utils_1.48-3ubuntu2_arm64.deb ... 80s Unpacking sg3-utils (1.48-3ubuntu2) over (1.48-3ubuntu1) ... 80s Preparing to unpack .../5-sg3-utils-udev_1.48-3ubuntu2_all.deb ... 80s Unpacking sg3-utils-udev (1.48-3ubuntu2) over (1.48-3ubuntu1) ... 80s Setting up liburcu8t64:arm64 (0.15.6-1) ... 80s Setting up libxcb1:arm64 (1.17.0-2ubuntu1) ... 80s Setting up libsgutils2-1.48:arm64 (1.48-3ubuntu2) ... 80s Setting up tzdata (2025c-3ubuntu3) ... 80s 80s Current default time zone: 'Etc/UTC' 80s Local time is now: Thu Jan 29 17:52:56 UTC 2026. 80s Universal Time is now: Thu Jan 29 17:52:56 UTC 2026. 80s Run 'dpkg-reconfigure tzdata' if you wish to change it. 80s 80s Setting up sg3-utils (1.48-3ubuntu2) ... 80s Setting up sg3-utils-udev (1.48-3ubuntu2) ... 81s update-initramfs: deferring update (trigger activated) 81s Processing triggers for libc-bin (2.42-2ubuntu4) ... 81s Processing triggers for man-db (2.13.1-1) ... 82s Processing triggers for initramfs-tools (0.150ubuntu7) ... 82s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 101s System running in EFI mode, skipping. 101s autopkgtest [17:53:17]: upgrading testbed (apt dist-upgrade and autopurge) 101s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s Calculating upgrade... 102s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 103s Reading package lists... 103s Building dependency tree... 103s Reading state information... 103s Solving dependencies... 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s autopkgtest [17:53:20]: rebooting testbed after setup commands that affected boot 143s autopkgtest [17:53:59]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:41:39 UTC 2026 146s autopkgtest [17:54:02]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-stars 148s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.6-8-1 (dsc) [2749 B] 148s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.6-8-1 (tar) [4038 kB] 148s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.6-8-1 (diff) [4400 B] 149s gpgv: Signature made Wed Feb 19 23:48:57 2025 UTC 149s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 149s gpgv: issuer "plessy@debian.org" 149s gpgv: Can't check signature: No public key 149s dpkg-source: warning: cannot verify inline signature for ./r-cran-stars_0.6-8-1.dsc: no acceptable signature found 149s autopkgtest [17:54:05]: testing package r-cran-stars version 0.6-8-1 151s autopkgtest [17:54:07]: build not needed 155s autopkgtest [17:54:11]: test run-unit-test: preparing testbed 155s Reading package lists... 155s Building dependency tree... 155s Reading state information... 156s Solving dependencies... 156s The following NEW packages will be installed: 156s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 156s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data 156s gdal-plugins javascript-common libabsl20260107 libaec0 libaom3 156s libarmadillo15 libarpack2t64 libavif16 libblas3 libblosc1 libcairo2 156s libcfitsio10t64 libdatrie1 libdav1d7 libde265-0 libdeflate0 libfontconfig1 156s libfreexl1 libfyba0t64 libgav1-2 libgdal38 libgeos-c1t64 libgeos3.14.1 156s libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 156s libharfbuzz0b libhdf4-0 libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 156s libheif-plugin-libde265 libheif1 libhwy1t64 libice6 libjbig0 libjpeg-turbo8 156s libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 156s libjs-highlight.js libjs-jquery libjs-jquery-datatables 156s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 156s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 156s libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 libkmlbase1t64 156s libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 156s liblua5.4-0 libminizip1t64 libmuparser2v5 libmysqlclient24 libnetcdf22 156s libodbc2 libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 156s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libpoppler147 156s libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 156s libspatialite8t64 libsuperlu7 libsz2 libtcl8.6 libthai-data libthai0 156s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 156s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 156s libxt6t64 libyuv0 mysql-common node-bootstrap-sass node-html5shiv 156s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 156s r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio 156s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-cftime 156s r-cran-class r-cran-classint r-cran-cli r-cran-clue r-cran-cluster 156s r-cran-codetools r-cran-collapse r-cran-commonmark r-cran-covr r-cran-cpp11 156s r-cran-crayon r-cran-cubelyr r-cran-curl r-cran-dbi r-cran-deldir 156s r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 156s r-cran-evaluate r-cran-exactextractr r-cran-fansi r-cran-farver 156s r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula r-cran-fs 156s r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 156s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 156s r-cran-gridextra r-cran-gstat r-cran-gtable r-cran-highr r-cran-htmltools 156s r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib 156s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later 156s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv 156s r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata 156s r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise 156s r-cran-mgcv r-cran-mime r-cran-misctools r-cran-ncdfgeom r-cran-ncmeta 156s r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict 156s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 156s r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx 156s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6 156s r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils 156s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex 156s r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot 156s r-cran-s2 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-sftime 156s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 156s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 156s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 156s r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils 156s r-cran-stars r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 156s r-cran-systemfonts r-cran-tensor r-cran-terra r-cran-testthat r-cran-tibble 156s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tweenr r-cran-units 156s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-waldo 156s r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml 156s r-cran-zoo unixodbc-common unzip x11-common xdg-utils zip 156s 0 upgraded, 292 newly installed, 0 to remove and 0 not upgraded. 156s Need to get 293 MB of archives. 156s After this operation, 788 MB of additional disk space will be used. 156s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 156s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 157s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 157s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 157s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 157s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 157s Get:7 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 157s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 157s Get:9 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-data all 3.12.1+dfsg-1 [278 kB] 157s Get:10 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-plugins arm64 3.12.1+dfsg-1 [26.8 kB] 157s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1 [4828 B] 157s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libabsl20260107 arm64 20260107.0-0ubuntu2 [563 kB] 157s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.5-1 [21.8 kB] 157s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libaom3 arm64 3.13.1-2 [1773 kB] 157s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 157s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-11ubuntu1 [450 kB] 157s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 157s Get:18 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarpack2t64 arm64 3.9.1-6 [94.9 kB] 157s Get:19 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsuperlu7 arm64 7.0.1+dfsg1-2 [171 kB] 157s Get:20 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarmadillo15 arm64 1:15.2.1+dfsg-2 [108 kB] 157s Get:21 http://ftpmaster.internal/ubuntu resolute/universe arm64 libdav1d7 arm64 1.5.3-1 [297 kB] 157s Get:22 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgav1-2 arm64 0.20.0-2build1 [547 kB] 157s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB] 157s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 157s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libyuv0 arm64 0.0.1922.20260106-1 [160 kB] 157s Get:26 http://ftpmaster.internal/ubuntu resolute/universe arm64 libavif16 arm64 1.3.0-1ubuntu3 [112 kB] 157s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 libsnappy1v5 arm64 1.2.2-2 [30.1 kB] 157s Get:28 http://ftpmaster.internal/ubuntu resolute/universe arm64 libblosc1 arm64 1.21.5+ds-2 [25.9 kB] 157s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 157s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 157s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 157s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 157s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 157s Get:34 http://ftpmaster.internal/ubuntu resolute/universe arm64 libcfitsio10t64 arm64 4.6.3-1 [517 kB] 157s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 157s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 libde265-0 arm64 1.0.16-1build1 [148 kB] 157s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 157s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfyba0t64 arm64 4.1.1-11build2 [119 kB] 157s Get:39 http://ftpmaster.internal/ubuntu resolute/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [24.4 kB] 157s Get:40 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfreexl1 arm64 2.0.0-1build3 [42.4 kB] 157s Get:41 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos3.14.1 arm64 3.14.1-2 [935 kB] 157s Get:42 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos-c1t64 arm64 3.14.1-2 [110 kB] 157s Get:43 http://ftpmaster.internal/ubuntu resolute/universe arm64 proj-data all 9.7.1-1 [7950 kB] 157s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 157s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 157s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 157s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 157s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 157s Get:49 http://ftpmaster.internal/ubuntu resolute/universe arm64 libproj25 arm64 9.7.1-1 [1370 kB] 157s Get:50 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeotiff5 arm64 1.7.4-1 [58.9 kB] 157s Get:51 http://ftpmaster.internal/ubuntu resolute/main arm64 libgif7 arm64 5.2.2-1ubuntu3 [35.8 kB] 157s Get:52 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.5-1 [17.0 kB] 157s Get:53 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf4-0 arm64 4.3.1-2 [304 kB] 157s Get:54 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.6+repack-2 [1287 kB] 157s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-aomdec arm64 1.21.2-1 [13.9 kB] 157s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-libde265 arm64 1.21.2-1 [9696 B] 157s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif1 arm64 1.21.2-1 [502 kB] 157s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwy1t64 arm64 1.3.0-2 [513 kB] 158s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 liblcms2-2 arm64 2.17-1 [170 kB] 158s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libjxl0.11 arm64 0.11.1-6ubuntu1 [909 kB] 158s Get:61 http://ftpmaster.internal/ubuntu resolute/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB] 158s Get:62 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlbase1t64 arm64 1.3.0-13 [48.2 kB] 158s Get:63 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmldom1t64 arm64 1.3.0-13 [143 kB] 158s Get:64 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlengine1t64 arm64 1.3.0-13 [68.9 kB] 158s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-11ubuntu1 [147 kB] 158s Get:66 http://ftpmaster.internal/ubuntu resolute/universe arm64 libmuparser2v5 arm64 2.3.4-2 [129 kB] 158s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 158s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 libmysqlclient24 arm64 8.4.8-0ubuntu1 [1244 kB] 158s Get:69 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-310 arm64 1.14.6+repack-2 [59.1 kB] 158s Get:70 http://ftpmaster.internal/ubuntu resolute/universe arm64 libnetcdf22 arm64 1:4.9.3-1build1 [555 kB] 158s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libltdl7 arm64 2.5.4-9 [43.3 kB] 158s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbc2 arm64 2.3.14-1 [143 kB] 158s Get:73 http://ftpmaster.internal/ubuntu resolute/main arm64 unixodbc-common all 2.3.14-1 [8792 B] 158s Get:74 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbcinst2 arm64 2.3.14-1 [30.6 kB] 158s Get:75 http://ftpmaster.internal/ubuntu resolute/main arm64 libopenjp2-7 arm64 2.5.4-1 [180 kB] 158s Get:76 http://ftpmaster.internal/ubuntu resolute/main arm64 libgpgmepp6t64 arm64 1.24.2-3ubuntu2 [117 kB] 158s Get:77 http://ftpmaster.internal/ubuntu resolute/main arm64 libpoppler147 arm64 25.03.0-11.1 [1149 kB] 158s Get:78 http://ftpmaster.internal/ubuntu resolute/main arm64 libpq5 arm64 18.1-2 [151 kB] 158s Get:79 http://ftpmaster.internal/ubuntu resolute/universe arm64 libqhull-r8.0 arm64 2020.2-8 [191 kB] 158s Get:80 http://ftpmaster.internal/ubuntu resolute/universe arm64 librttopo1 arm64 1.1.0-4 [190 kB] 158s Get:81 http://ftpmaster.internal/ubuntu resolute/universe arm64 libspatialite8t64 arm64 5.1.0-3ubuntu1 [1816 kB] 158s Get:82 http://ftpmaster.internal/ubuntu resolute/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build2 [913 kB] 158s Get:83 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgdal38 arm64 3.12.1+dfsg-1 [10.4 MB] 158s Get:84 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 158s Get:85 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.1-1 [510 kB] 158s Get:86 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 158s Get:87 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 158s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 158s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 158s Get:90 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 158s Get:91 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 158s Get:92 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 158s Get:93 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 158s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 158s Get:95 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 158s Get:96 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 158s Get:97 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 158s Get:98 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 158s Get:99 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 158s Get:100 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 158s Get:101 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-2 [41.3 kB] 158s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 158s Get:103 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 158s Get:104 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 158s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 158s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 158s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 158s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 158s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 158s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB] 158s Get:111 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [1024 kB] 158s Get:112 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 158s Get:113 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 158s Get:114 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 158s Get:115 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-data all 2.2.28-8 [19.3 kB] 158s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-0 arm64 2.2.28-8 [53.0 kB] 158s Get:117 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 158s Get:118 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 158s Get:119 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 158s Get:120 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 158s Get:121 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 158s Get:122 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 159s Get:123 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu2 [175 kB] 159s Get:124 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 159s Get:125 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 159s Get:126 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 159s Get:127 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 159s Get:128 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 159s Get:129 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 159s Get:130 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 159s Get:131 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 159s Get:132 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 159s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 159s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 159s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 159s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 159s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 159s Get:138 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 159s Get:139 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 159s Get:140 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 159s Get:141 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 159s Get:142 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 159s Get:143 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 159s Get:144 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 159s Get:145 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB] 159s Get:146 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 159s Get:147 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 159s Get:148 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-e1071 arm64 1.7-17-1 [576 kB] 159s Get:149 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-kernsmooth arm64 2.23-26-1build1 [93.6 kB] 159s Get:150 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-classint arm64 0.4-11+dfsg-1 [108 kB] 159s Get:151 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1build1 [855 kB] 159s Get:152 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.21-2 [83.6 kB] 159s Get:153 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 159s Get:154 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 159s Get:155 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB] 159s Get:156 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s2 arm64 1.1.9-1build1 [1766 kB] 159s Get:157 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-units arm64 0.8-7+dfsg-2 [289 kB] 159s Get:158 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sf arm64 1.0-19+dfsg-2build2 [3240 kB] 160s Get:159 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 160s Get:160 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 160s Get:161 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 160s Get:162 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 160s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB] 160s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 160s Get:165 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 160s Get:166 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 160s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 160s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 160s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 160s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 160s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 160s Get:172 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 160s Get:173 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 160s Get:174 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 160s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 160s Get:176 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 160s Get:177 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 160s Get:178 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 160s Get:179 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 160s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 160s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cftime all 1.7.2-1 [918 kB] 160s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cluster arm64 2.1.8.1-1 [569 kB] 160s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clue arm64 0.3-66-1 [967 kB] 160s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 160s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-collapse arm64 2.1.0-1 [3304 kB] 160s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 160s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 160s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rex all 1.2.1-1build1 [126 kB] 160s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 160s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 160s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 160s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 160s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 160s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 160s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 160s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cubelyr all 1.0.2-1 [347 kB] 160s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 160s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 160s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1build1 [1154 kB] 160s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 160s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 160s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sp arm64 1:2.2-0+dfsg-1 [1443 kB] 160s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-terra arm64 1.8-70-1build2 [4198 kB] 161s Get:204 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-raster arm64 3.6-32-1 [3161 kB] 161s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-exactextractr arm64 0.10.0-1build2 [568 kB] 161s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 161s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 161s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 161s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 161s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-globals all 0.18.0-1 [158 kB] 161s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 161s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-parallelly arm64 1.42.0-1 [540 kB] 161s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 161s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 161s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 161s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 161s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB] 162s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 162s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mgcv arm64 1.9-4-1 [3546 kB] 162s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 162s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 162s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 162s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 162s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 162s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tweenr arm64 2.0.3-1 [404 kB] 162s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 162s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-systemfonts arm64 1.2.1-1 [302 kB] 162s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 162s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggforce arm64 0.4.2-1 [1778 kB] 162s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 162s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 162s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggthemes all 5.2.0-1 [760 kB] 162s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-goftest arm64 1.2-3-1build1 [61.3 kB] 162s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gridextra all 2.3-3build2 [1032 kB] 162s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-zoo arm64 1.8-15-1 [1025 kB] 162s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sftime all 0.2-0-6 [168 kB] 162s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xts arm64 0.14.1-1 [1189 kB] 162s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB] 163s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spacetime all 1.3-3-2 [2780 kB] 163s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stars all 0.6-8-1 [4414 kB] 163s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gstat arm64 2.1-3-2 [2328 kB] 163s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 163s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 163s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 163s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 163s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 163s Get:247 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 163s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 163s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lmtest arm64 0.9.40-1build1 [400 kB] 163s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lwgeom arm64 0.2-14-1 [394 kB] 163s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maps arm64 3.4.2.1-1 [2350 kB] 164s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB] 164s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB] 165s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 165s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maxlik all 1.5-2.2-1 [1115 kB] 165s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rnetcdf arm64 2.9-2-1 [236 kB] 165s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 165s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncmeta all 0.4.0-1 [362 kB] 165s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 165s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 165s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pcict arm64 0.5-4.4-1 [94.0 kB] 165s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 165s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.1.1-1 [131 kB] 165s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.1-1 [252 kB] 165s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 166s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rdpack all 2.6.3-1 [636 kB] 166s Get:267 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plm all 2.6-7-1 [1823 kB] 166s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 166s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-randomforest arm64 4.7-1.2-1 [216 kB] 166s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 166s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 166s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 166s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 166s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 166s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 166s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 166s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 167s Get:278 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 167s Get:279 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.utils arm64 3.1-3-1 [386 kB] 167s Get:280 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.data all 3.1-6-1 [4153 kB] 167s Get:281 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.univar arm64 3.1-2-1 [314 kB] 167s Get:282 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.geom arm64 3.3-6-1 [3941 kB] 167s Get:283 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.random arm64 3.3-3-1 [1163 kB] 167s Get:284 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tensor all 1.5-4build1 [16.3 kB] 167s Get:285 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.sparse arm64 3.1-0-1 [218 kB] 167s Get:286 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.explore arm64 3.3-4-1 [3272 kB] 168s Get:287 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.model arm64 3.3-4-1 [3398 kB] 168s Get:288 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.linnet arm64 3.2-5-1 [1507 kB] 168s Get:289 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat arm64 3.3-1-1 [4120 kB] 168s Get:290 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.2-1 [153 kB] 168s Get:291 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 168s Get:292 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 169s Preconfiguring packages ... 169s Fetched 293 MB in 12s (23.7 MB/s) 169s Selecting previously unselected package fonts-dejavu-mono. 170s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 170s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ... 170s Unpacking fonts-dejavu-mono (2.37-8build1) ... 170s Selecting previously unselected package fonts-dejavu-core. 170s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ... 170s Unpacking fonts-dejavu-core (2.37-8build1) ... 170s Selecting previously unselected package fontconfig-config. 170s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_arm64.deb ... 170s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 170s Selecting previously unselected package libfontconfig1:arm64. 170s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_arm64.deb ... 170s Unpacking libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 170s Selecting previously unselected package fontconfig. 170s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_arm64.deb ... 170s Unpacking fontconfig (2.17.1-3ubuntu1) ... 170s Selecting previously unselected package fonts-font-awesome. 170s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 170s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 170s Selecting previously unselected package fonts-glyphicons-halflings. 170s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 170s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 170s Selecting previously unselected package fonts-mathjax. 170s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 170s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 170s Selecting previously unselected package gdal-data. 170s Preparing to unpack .../008-gdal-data_3.12.1+dfsg-1_all.deb ... 170s Unpacking gdal-data (3.12.1+dfsg-1) ... 170s Selecting previously unselected package gdal-plugins:arm64. 171s Preparing to unpack .../009-gdal-plugins_3.12.1+dfsg-1_arm64.deb ... 171s Unpacking gdal-plugins:arm64 (3.12.1+dfsg-1) ... 171s Selecting previously unselected package javascript-common. 171s Preparing to unpack .../010-javascript-common_12+nmu1_all.deb ... 171s Unpacking javascript-common (12+nmu1) ... 171s Selecting previously unselected package libabsl20260107:arm64. 171s Preparing to unpack .../011-libabsl20260107_20260107.0-0ubuntu2_arm64.deb ... 171s Unpacking libabsl20260107:arm64 (20260107.0-0ubuntu2) ... 171s Selecting previously unselected package libaec0:arm64. 171s Preparing to unpack .../012-libaec0_1.1.5-1_arm64.deb ... 171s Unpacking libaec0:arm64 (1.1.5-1) ... 171s Selecting previously unselected package libaom3:arm64. 171s Preparing to unpack .../013-libaom3_3.13.1-2_arm64.deb ... 171s Unpacking libaom3:arm64 (3.13.1-2) ... 171s Selecting previously unselected package libblas3:arm64. 171s Preparing to unpack .../014-libblas3_3.12.1-7ubuntu1_arm64.deb ... 171s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 171s Selecting previously unselected package libgfortran5:arm64. 171s Preparing to unpack .../015-libgfortran5_15.2.0-11ubuntu1_arm64.deb ... 171s Unpacking libgfortran5:arm64 (15.2.0-11ubuntu1) ... 171s Selecting previously unselected package liblapack3:arm64. 171s Preparing to unpack .../016-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 171s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 171s Selecting previously unselected package libarpack2t64:arm64. 171s Preparing to unpack .../017-libarpack2t64_3.9.1-6_arm64.deb ... 171s Unpacking libarpack2t64:arm64 (3.9.1-6) ... 171s Selecting previously unselected package libsuperlu7:arm64. 171s Preparing to unpack .../018-libsuperlu7_7.0.1+dfsg1-2_arm64.deb ... 171s Unpacking libsuperlu7:arm64 (7.0.1+dfsg1-2) ... 171s Selecting previously unselected package libarmadillo15. 171s Preparing to unpack .../019-libarmadillo15_1%3a15.2.1+dfsg-2_arm64.deb ... 171s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 171s Selecting previously unselected package libdav1d7:arm64. 171s Preparing to unpack .../020-libdav1d7_1.5.3-1_arm64.deb ... 171s Unpacking libdav1d7:arm64 (1.5.3-1) ... 171s Selecting previously unselected package libgav1-2:arm64. 171s Preparing to unpack .../021-libgav1-2_0.20.0-2build1_arm64.deb ... 171s Unpacking libgav1-2:arm64 (0.20.0-2build1) ... 171s Selecting previously unselected package libjpeg-turbo8:arm64. 172s Preparing to unpack .../022-libjpeg-turbo8_2.1.5-4ubuntu2_arm64.deb ... 172s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 172s Selecting previously unselected package libjpeg8:arm64. 172s Preparing to unpack .../023-libjpeg8_8c-2ubuntu11_arm64.deb ... 172s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 172s Selecting previously unselected package libyuv0:arm64. 172s Preparing to unpack .../024-libyuv0_0.0.1922.20260106-1_arm64.deb ... 172s Unpacking libyuv0:arm64 (0.0.1922.20260106-1) ... 172s Selecting previously unselected package libavif16:arm64. 172s Preparing to unpack .../025-libavif16_1.3.0-1ubuntu3_arm64.deb ... 172s Unpacking libavif16:arm64 (1.3.0-1ubuntu3) ... 172s Selecting previously unselected package libsnappy1v5:arm64. 172s Preparing to unpack .../026-libsnappy1v5_1.2.2-2_arm64.deb ... 172s Unpacking libsnappy1v5:arm64 (1.2.2-2) ... 172s Selecting previously unselected package libblosc1:arm64. 172s Preparing to unpack .../027-libblosc1_1.21.5+ds-2_arm64.deb ... 172s Unpacking libblosc1:arm64 (1.21.5+ds-2) ... 172s Selecting previously unselected package libpixman-1-0:arm64. 172s Preparing to unpack .../028-libpixman-1-0_0.46.4-1_arm64.deb ... 172s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 172s Selecting previously unselected package libxcb-render0:arm64. 172s Preparing to unpack .../029-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 172s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 172s Selecting previously unselected package libxcb-shm0:arm64. 172s Preparing to unpack .../030-libxcb-shm0_1.17.0-2ubuntu1_arm64.deb ... 172s Unpacking libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 172s Selecting previously unselected package libxrender1:arm64. 172s Preparing to unpack .../031-libxrender1_1%3a0.9.12-1_arm64.deb ... 172s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 172s Selecting previously unselected package libcairo2:arm64. 172s Preparing to unpack .../032-libcairo2_1.18.4-3_arm64.deb ... 172s Unpacking libcairo2:arm64 (1.18.4-3) ... 172s Selecting previously unselected package libcfitsio10t64:arm64. 173s Preparing to unpack .../033-libcfitsio10t64_4.6.3-1_arm64.deb ... 173s Unpacking libcfitsio10t64:arm64 (4.6.3-1) ... 173s Selecting previously unselected package libdatrie1:arm64. 173s Preparing to unpack .../034-libdatrie1_0.2.14-1_arm64.deb ... 173s Unpacking libdatrie1:arm64 (0.2.14-1) ... 173s Selecting previously unselected package libde265-0:arm64. 173s Preparing to unpack .../035-libde265-0_1.0.16-1build1_arm64.deb ... 173s Unpacking libde265-0:arm64 (1.0.16-1build1) ... 173s Selecting previously unselected package libdeflate0:arm64. 173s Preparing to unpack .../036-libdeflate0_1.23-2_arm64.deb ... 173s Unpacking libdeflate0:arm64 (1.23-2) ... 173s Selecting previously unselected package libfyba0t64:arm64. 173s Preparing to unpack .../037-libfyba0t64_4.1.1-11build2_arm64.deb ... 173s Unpacking libfyba0t64:arm64 (4.1.1-11build2) ... 173s Selecting previously unselected package libminizip1t64:arm64. 173s Preparing to unpack .../038-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 173s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 173s Selecting previously unselected package libfreexl1:arm64. 173s Preparing to unpack .../039-libfreexl1_2.0.0-1build3_arm64.deb ... 173s Unpacking libfreexl1:arm64 (2.0.0-1build3) ... 173s Selecting previously unselected package libgeos3.14.1:arm64. 173s Preparing to unpack .../040-libgeos3.14.1_3.14.1-2_arm64.deb ... 173s Unpacking libgeos3.14.1:arm64 (3.14.1-2) ... 173s Selecting previously unselected package libgeos-c1t64:arm64. 173s Preparing to unpack .../041-libgeos-c1t64_3.14.1-2_arm64.deb ... 173s Unpacking libgeos-c1t64:arm64 (3.14.1-2) ... 173s Selecting previously unselected package proj-data. 173s Preparing to unpack .../042-proj-data_9.7.1-1_all.deb ... 173s Unpacking proj-data (9.7.1-1) ... 173s Selecting previously unselected package libjbig0:arm64. 173s Preparing to unpack .../043-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 173s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 173s Selecting previously unselected package liblerc4:arm64. 173s Preparing to unpack .../044-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 173s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 173s Selecting previously unselected package libsharpyuv0:arm64. 173s Preparing to unpack .../045-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 173s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 173s Selecting previously unselected package libwebp7:arm64. 173s Preparing to unpack .../046-libwebp7_1.5.0-0.1build1_arm64.deb ... 173s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 173s Selecting previously unselected package libtiff6:arm64. 173s Preparing to unpack .../047-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 173s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 173s Selecting previously unselected package libproj25:arm64. 173s Preparing to unpack .../048-libproj25_9.7.1-1_arm64.deb ... 173s Unpacking libproj25:arm64 (9.7.1-1) ... 174s Selecting previously unselected package libgeotiff5:arm64. 174s Preparing to unpack .../049-libgeotiff5_1.7.4-1_arm64.deb ... 174s Unpacking libgeotiff5:arm64 (1.7.4-1) ... 174s Selecting previously unselected package libgif7:arm64. 174s Preparing to unpack .../050-libgif7_5.2.2-1ubuntu3_arm64.deb ... 174s Unpacking libgif7:arm64 (5.2.2-1ubuntu3) ... 174s Selecting previously unselected package libsz2:arm64. 174s Preparing to unpack .../051-libsz2_1.1.5-1_arm64.deb ... 174s Unpacking libsz2:arm64 (1.1.5-1) ... 174s Selecting previously unselected package libhdf4-0:arm64. 174s Preparing to unpack .../052-libhdf4-0_4.3.1-2_arm64.deb ... 174s Unpacking libhdf4-0:arm64 (4.3.1-2) ... 174s Selecting previously unselected package libhdf5-310:arm64. 174s Preparing to unpack .../053-libhdf5-310_1.14.6+repack-2_arm64.deb ... 174s Unpacking libhdf5-310:arm64 (1.14.6+repack-2) ... 174s Selecting previously unselected package libheif-plugin-aomdec:arm64. 174s Preparing to unpack .../054-libheif-plugin-aomdec_1.21.2-1_arm64.deb ... 174s Unpacking libheif-plugin-aomdec:arm64 (1.21.2-1) ... 174s Selecting previously unselected package libheif-plugin-libde265:arm64. 174s Preparing to unpack .../055-libheif-plugin-libde265_1.21.2-1_arm64.deb ... 174s Unpacking libheif-plugin-libde265:arm64 (1.21.2-1) ... 174s Selecting previously unselected package libheif1:arm64. 174s Preparing to unpack .../056-libheif1_1.21.2-1_arm64.deb ... 174s Unpacking libheif1:arm64 (1.21.2-1) ... 174s Selecting previously unselected package libhwy1t64:arm64. 174s Preparing to unpack .../057-libhwy1t64_1.3.0-2_arm64.deb ... 174s Unpacking libhwy1t64:arm64 (1.3.0-2) ... 174s Selecting previously unselected package liblcms2-2:arm64. 174s Preparing to unpack .../058-liblcms2-2_2.17-1_arm64.deb ... 174s Unpacking liblcms2-2:arm64 (2.17-1) ... 174s Selecting previously unselected package libjxl0.11:arm64. 174s Preparing to unpack .../059-libjxl0.11_0.11.1-6ubuntu1_arm64.deb ... 174s Unpacking libjxl0.11:arm64 (0.11.1-6ubuntu1) ... 174s Selecting previously unselected package liburiparser1:arm64. 174s Preparing to unpack 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174s Unpacking libmuparser2v5:arm64 (2.3.4-2) ... 174s Selecting previously unselected package mysql-common. 174s Preparing to unpack .../066-mysql-common_5.8+1.1.1ubuntu2_all.deb ... 175s Unpacking mysql-common (5.8+1.1.1ubuntu2) ... 175s Selecting previously unselected package libmysqlclient24:arm64. 175s Preparing to unpack .../067-libmysqlclient24_8.4.8-0ubuntu1_arm64.deb ... 175s Unpacking libmysqlclient24:arm64 (8.4.8-0ubuntu1) ... 175s Selecting previously unselected package libhdf5-hl-310:arm64. 175s Preparing to unpack .../068-libhdf5-hl-310_1.14.6+repack-2_arm64.deb ... 175s Unpacking libhdf5-hl-310:arm64 (1.14.6+repack-2) ... 175s Selecting previously unselected package libnetcdf22:arm64. 175s Preparing to unpack .../069-libnetcdf22_1%3a4.9.3-1build1_arm64.deb ... 175s Unpacking libnetcdf22:arm64 (1:4.9.3-1build1) ... 175s Selecting previously unselected package libltdl7:arm64. 175s Preparing to unpack .../070-libltdl7_2.5.4-9_arm64.deb ... 175s Unpacking libltdl7:arm64 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Preparing to unpack .../076-libpoppler147_25.03.0-11.1_arm64.deb ... 175s Unpacking libpoppler147:arm64 (25.03.0-11.1) ... 175s Selecting previously unselected package libpq5:arm64. 175s Preparing to unpack .../077-libpq5_18.1-2_arm64.deb ... 175s Unpacking libpq5:arm64 (18.1-2) ... 175s Selecting previously unselected package libqhull-r8.0:arm64. 175s Preparing to unpack .../078-libqhull-r8.0_2020.2-8_arm64.deb ... 175s Unpacking libqhull-r8.0:arm64 (2020.2-8) ... 175s Selecting previously unselected package librttopo1:arm64. 175s Preparing to unpack .../079-librttopo1_1.1.0-4_arm64.deb ... 175s Unpacking librttopo1:arm64 (1.1.0-4) ... 175s Selecting previously unselected package libspatialite8t64:arm64. 175s Preparing to unpack .../080-libspatialite8t64_5.1.0-3ubuntu1_arm64.deb ... 175s Unpacking libspatialite8t64:arm64 (5.1.0-3ubuntu1) ... 175s Selecting previously unselected package libxerces-c3.2t64:arm64. 175s Preparing to unpack .../081-libxerces-c3.2t64_3.2.4+debian-1.3build2_arm64.deb ... 175s Unpacking libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build2) ... 175s Selecting previously unselected package libgdal38:arm64. 175s Preparing to unpack .../082-libgdal38_3.12.1+dfsg-1_arm64.deb ... 175s Unpacking libgdal38:arm64 (3.12.1+dfsg-1) ... 176s Selecting previously unselected package libgraphite2-3:arm64. 176s Preparing to unpack .../083-libgraphite2-3_1.3.14-11ubuntu1_arm64.deb ... 176s Unpacking libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 176s Selecting previously unselected package libharfbuzz0b:arm64. 176s Preparing to unpack .../084-libharfbuzz0b_12.3.1-1_arm64.deb ... 176s Unpacking libharfbuzz0b:arm64 (12.3.1-1) ... 176s Selecting previously unselected package x11-common. 176s Preparing to unpack .../085-x11-common_1%3a7.7+24ubuntu1_all.deb ... 176s Unpacking x11-common (1:7.7+24ubuntu1) ... 176s Selecting previously unselected package libice6:arm64. 176s Preparing to unpack .../086-libice6_2%3a1.1.1-1build1_arm64.deb ... 176s Unpacking libice6:arm64 (2:1.1.1-1build1) ... 176s Selecting previously unselected package libjs-bootstrap. 176s Preparing to unpack .../087-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 176s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 176s Selecting previously unselected package libjs-popper.js. 176s Preparing to unpack .../088-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 176s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 176s Selecting previously unselected package libjs-bootstrap4. 176s Preparing to unpack .../089-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 176s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 176s Selecting previously unselected package libjs-d3. 176s Preparing to unpack .../090-libjs-d3_3.5.17-4build1_all.deb ... 176s Unpacking libjs-d3 (3.5.17-4build1) ... 176s Selecting previously unselected package libjs-es5-shim. 176s Preparing to unpack .../091-libjs-es5-shim_4.6.7-2_all.deb ... 176s Unpacking libjs-es5-shim (4.6.7-2) ... 176s Selecting previously unselected package libjs-highlight.js. 176s Preparing to unpack .../092-libjs-highlight.js_10.7.3+dfsg-2_all.deb ... 176s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ... 176s Selecting previously unselected package libjs-jquery. 176s Preparing to unpack .../093-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 176s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 176s Selecting previously unselected package libjs-jquery-datatables. 176s Preparing to unpack .../094-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 176s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 176s Selecting previously unselected package libjs-sifter.js. 176s Preparing to unpack .../095-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 176s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 176s Selecting previously unselected package libjs-microplugin.js. 176s Preparing to unpack .../096-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ... 176s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ... 176s Selecting previously unselected package libjs-jquery-selectize.js. 176s Preparing to unpack .../097-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 176s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 177s Selecting previously unselected package libjs-jquery-ui. 177s Preparing to unpack .../098-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 177s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 177s Selecting previously unselected package libjs-json. 177s Preparing to unpack .../099-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 177s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 177s Selecting previously unselected package libjs-prettify. 177s Preparing to unpack .../100-libjs-prettify_2015.12.04+dfsg-2_all.deb ... 177s Unpacking libjs-prettify (2015.12.04+dfsg-2) ... 177s Selecting previously unselected package liblua5.4-0:arm64. 177s Preparing to unpack .../101-liblua5.4-0_5.4.8-1_arm64.deb ... 177s Unpacking liblua5.4-0:arm64 (5.4.8-1) ... 177s Selecting previously unselected package libthai-data. 177s Preparing to unpack .../102-libthai-data_0.1.30-1_all.deb ... 177s Unpacking libthai-data (0.1.30-1) ... 177s Selecting previously unselected package libthai0:arm64. 177s Preparing to unpack .../103-libthai0_0.1.30-1_arm64.deb ... 177s Unpacking libthai0:arm64 (0.1.30-1) ... 177s Selecting previously unselected package libpango-1.0-0:arm64. 177s Preparing to unpack .../104-libpango-1.0-0_1.57.0-1_arm64.deb ... 177s Unpacking libpango-1.0-0:arm64 (1.57.0-1) ... 177s Selecting previously unselected package libpangoft2-1.0-0:arm64. 177s Preparing to unpack .../105-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 177s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 177s Selecting previously unselected package libpangocairo-1.0-0:arm64. 177s Preparing to unpack .../106-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 177s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 177s Selecting previously unselected package libpaper2:arm64. 177s Preparing to unpack .../107-libpaper2_2.2.5-0.3build1_arm64.deb ... 177s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 177s Selecting previously unselected package libpaper-utils. 177s Preparing to unpack .../108-libpaper-utils_2.2.5-0.3build1_arm64.deb ... 177s Unpacking libpaper-utils (2.2.5-0.3build1) ... 177s Selecting previously unselected package libsm6:arm64. 177s Preparing to unpack .../109-libsm6_2%3a1.2.6-1_arm64.deb ... 177s Unpacking libsm6:arm64 (2:1.2.6-1) ... 177s Selecting previously unselected package libtcl8.6:arm64. 177s Preparing to unpack .../110-libtcl8.6_8.6.17+dfsg-1_arm64.deb ... 177s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1) ... 177s Selecting previously unselected package libxft2:arm64. 177s Preparing to unpack .../111-libxft2_2.3.6-1build2_arm64.deb ... 177s Unpacking libxft2:arm64 (2.3.6-1build2) ... 177s Selecting previously unselected package libxss1:arm64. 177s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build4_arm64.deb ... 177s Unpacking libxss1:arm64 (1:1.2.3-1build4) ... 177s Selecting previously unselected package libtk8.6:arm64. 177s Preparing to unpack .../113-libtk8.6_8.6.17-1_arm64.deb ... 177s Unpacking libtk8.6:arm64 (8.6.17-1) ... 177s Selecting previously unselected package libudunits2-data. 177s Preparing to unpack .../114-libudunits2-data_2.2.28-8_all.deb ... 177s Unpacking libudunits2-data (2.2.28-8) ... 177s Selecting previously unselected package libudunits2-0:arm64. 177s Preparing to unpack .../115-libudunits2-0_2.2.28-8_arm64.deb ... 177s Unpacking libudunits2-0:arm64 (2.2.28-8) ... 177s Selecting previously unselected package libxt6t64:arm64. 177s Preparing to unpack .../116-libxt6t64_1%3a1.2.1-1.3_arm64.deb ... 177s Unpacking libxt6t64:arm64 (1:1.2.1-1.3) ... 178s Selecting previously unselected package node-bootstrap-sass. 178s Preparing to unpack .../117-node-bootstrap-sass_3.4.3-2_all.deb ... 178s Unpacking node-bootstrap-sass (3.4.3-2) ... 178s Selecting previously unselected package node-html5shiv. 178s Preparing to unpack .../118-node-html5shiv_3.7.3+dfsg-5_all.deb ... 178s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 178s Selecting previously unselected package node-normalize.css. 178s Preparing to unpack .../119-node-normalize.css_8.0.1-5.1_all.deb ... 178s Unpacking node-normalize.css (8.0.1-5.1) ... 178s Selecting previously unselected package pandoc-data. 178s Preparing to unpack .../120-pandoc-data_3.1.11.1-3build1_all.deb ... 178s Unpacking pandoc-data (3.1.11.1-3build1) ... 178s Selecting previously unselected package pandoc. 178s Preparing to unpack .../121-pandoc_3.1.11.1+ds-4_arm64.deb ... 178s Unpacking pandoc (3.1.11.1+ds-4) ... 179s Selecting previously unselected package zip. 179s Preparing to unpack .../122-zip_3.0-15ubuntu2_arm64.deb ... 179s Unpacking zip (3.0-15ubuntu2) ... 179s Selecting previously unselected package unzip. 179s Preparing to unpack .../123-unzip_6.0-29ubuntu1_arm64.deb ... 179s Unpacking unzip (6.0-29ubuntu1) ... 179s Selecting previously unselected package xdg-utils. 179s Preparing to unpack .../124-xdg-utils_1.2.1-2ubuntu2_all.deb ... 179s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 179s Selecting previously unselected package r-base-core. 179s Preparing to unpack .../125-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 179s Unpacking r-base-core (4.5.2-1ubuntu2) ... 179s Selecting previously unselected package r-cran-abind. 179s Preparing to unpack .../126-r-cran-abind_1.4-8-1build1_all.deb ... 179s Unpacking r-cran-abind (1.4-8-1build1) ... 179s Selecting previously unselected package r-cran-cli. 179s Preparing to unpack .../127-r-cran-cli_3.6.4-1_arm64.deb ... 179s Unpacking r-cran-cli (3.6.4-1) ... 179s Selecting previously unselected package r-cran-generics. 179s Preparing to unpack .../128-r-cran-generics_0.1.4-1_all.deb ... 179s Unpacking r-cran-generics (0.1.4-1) ... 179s Selecting previously unselected package r-cran-glue. 179s Preparing to unpack .../129-r-cran-glue_1.8.0-1_arm64.deb ... 179s Unpacking r-cran-glue (1.8.0-1) ... 179s Selecting previously unselected package r-cran-rlang. 180s Preparing to unpack .../130-r-cran-rlang_1.1.5-3_arm64.deb ... 180s Unpacking r-cran-rlang (1.1.5-3) ... 180s Selecting previously unselected package r-cran-lifecycle. 180s Preparing to unpack .../131-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 180s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 180s Selecting previously unselected package r-cran-magrittr. 180s Preparing to unpack .../132-r-cran-magrittr_2.0.3-1_arm64.deb ... 180s Unpacking r-cran-magrittr (2.0.3-1) ... 180s Selecting previously unselected package r-cran-utf8. 180s Preparing to unpack .../133-r-cran-utf8_1.2.4-1_arm64.deb ... 180s Unpacking r-cran-utf8 (1.2.4-1) ... 180s Selecting previously unselected package r-cran-vctrs. 180s Preparing to unpack .../134-r-cran-vctrs_0.6.5-1_arm64.deb ... 180s Unpacking r-cran-vctrs (0.6.5-1) ... 180s Selecting previously unselected package r-cran-pillar. 180s Preparing to unpack .../135-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 180s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 180s Selecting previously unselected package r-cran-r6. 180s Preparing to unpack .../136-r-cran-r6_2.6.1-1_all.deb ... 180s Unpacking r-cran-r6 (2.6.1-1) ... 180s Selecting previously unselected package r-cran-fansi. 180s Preparing to unpack .../137-r-cran-fansi_1.0.6-2_arm64.deb ... 180s Unpacking r-cran-fansi (1.0.6-2) ... 180s Selecting previously unselected package r-cran-pkgconfig. 180s Preparing to unpack .../138-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 180s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 180s Selecting previously unselected package r-cran-tibble. 180s Preparing to unpack .../139-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 180s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 180s Selecting previously unselected package r-cran-withr. 180s Preparing to unpack .../140-r-cran-withr_3.0.2+dfsg-1_all.deb ... 180s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 180s Selecting previously unselected package r-cran-tidyselect. 180s Preparing to unpack .../141-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 180s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 180s Selecting previously unselected package r-cran-dplyr. 180s Preparing to unpack .../142-r-cran-dplyr_1.1.4-4_arm64.deb ... 180s Unpacking r-cran-dplyr (1.1.4-4) ... 180s Selecting previously unselected package r-cran-purrr. 180s Preparing to unpack .../143-r-cran-purrr_1.0.4-1_arm64.deb ... 180s Unpacking r-cran-purrr (1.0.4-1) ... 180s Selecting previously unselected package r-cran-mass. 180s Preparing to unpack .../144-r-cran-mass_7.3-65-1_arm64.deb ... 180s Unpacking r-cran-mass (7.3-65-1) ... 180s Selecting previously unselected package r-cran-class. 180s Preparing to unpack .../145-r-cran-class_7.3-23-1_arm64.deb ... 180s Unpacking r-cran-class (7.3-23-1) ... 180s Selecting previously unselected package r-cran-proxy. 180s Preparing to unpack .../146-r-cran-proxy_0.4-27-1_arm64.deb ... 180s Unpacking r-cran-proxy (0.4-27-1) ... 181s Selecting previously unselected package r-cran-e1071. 181s Preparing to unpack .../147-r-cran-e1071_1.7-17-1_arm64.deb ... 181s Unpacking r-cran-e1071 (1.7-17-1) ... 181s Selecting previously unselected package r-cran-kernsmooth. 181s Preparing to unpack .../148-r-cran-kernsmooth_2.23-26-1build1_arm64.deb ... 181s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 181s Selecting previously unselected package r-cran-classint. 181s Preparing to unpack .../149-r-cran-classint_0.4-11+dfsg-1_arm64.deb ... 181s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 181s Selecting previously unselected package r-cran-dbi. 181s Preparing to unpack .../150-r-cran-dbi_1.2.3-1build1_all.deb ... 181s Unpacking r-cran-dbi (1.2.3-1build1) ... 181s Selecting previously unselected package r-cran-littler. 181s Preparing to unpack .../151-r-cran-littler_0.3.21-2_arm64.deb ... 181s Unpacking r-cran-littler (0.3.21-2) ... 181s Selecting previously unselected package r-cran-pkgkitten. 181s Preparing to unpack .../152-r-cran-pkgkitten_0.2.4-1_all.deb ... 181s Unpacking r-cran-pkgkitten (0.2.4-1) ... 181s Selecting previously unselected package r-cran-rcpp. 181s Preparing to unpack .../153-r-cran-rcpp_1.1.0-1_arm64.deb ... 181s Unpacking r-cran-rcpp (1.1.0-1) ... 181s Selecting previously unselected package r-cran-wk. 181s Preparing to unpack .../154-r-cran-wk_0.9.4-1_arm64.deb ... 181s Unpacking r-cran-wk (0.9.4-1) ... 181s Selecting previously unselected package r-cran-s2. 181s Preparing to unpack .../155-r-cran-s2_1.1.9-1build1_arm64.deb ... 181s Unpacking r-cran-s2 (1.1.9-1build1) ... 181s Selecting previously unselected package r-cran-units. 181s Preparing to unpack .../156-r-cran-units_0.8-7+dfsg-2_arm64.deb ... 181s Unpacking r-cran-units (0.8-7+dfsg-2) ... 181s Selecting previously unselected package r-cran-sf. 181s Preparing to unpack .../157-r-cran-sf_1.0-19+dfsg-2build2_arm64.deb ... 181s Unpacking r-cran-sf (1.0-19+dfsg-2build2) ... 181s Selecting previously unselected package r-cran-areal. 181s Preparing to unpack .../158-r-cran-areal_0.1.8+dfsg-2_all.deb ... 181s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 181s Selecting previously unselected package r-cran-sys. 181s Preparing to unpack .../159-r-cran-sys_3.4.3-1_arm64.deb ... 181s Unpacking r-cran-sys (3.4.3-1) ... 181s Selecting previously unselected package r-cran-askpass. 181s Preparing to unpack .../160-r-cran-askpass_1.2.1-1_arm64.deb ... 181s Unpacking r-cran-askpass (1.2.1-1) ... 181s Selecting previously unselected package r-cran-base64enc. 181s Preparing to unpack .../161-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 181s Unpacking r-cran-base64enc (0.1-3-3build1) ... 182s Selecting previously unselected package r-cran-bdsmatrix. 182s Preparing to unpack .../162-r-cran-bdsmatrix_1.3-7-1_arm64.deb ... 182s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 182s Selecting previously unselected package r-cran-brio. 182s Preparing to unpack .../163-r-cran-brio_1.1.5-1_arm64.deb ... 182s Unpacking r-cran-brio (1.1.5-1) ... 182s Selecting previously unselected package r-cran-fastmap. 182s Preparing to unpack .../164-r-cran-fastmap_1.2.0-1_arm64.deb ... 182s Unpacking r-cran-fastmap (1.2.0-1) ... 182s Selecting previously unselected package r-cran-cachem. 182s Preparing to unpack .../165-r-cran-cachem_1.1.0-1_arm64.deb ... 182s Unpacking r-cran-cachem (1.1.0-1) ... 182s Selecting previously unselected package r-cran-digest. 182s Preparing to unpack .../166-r-cran-digest_0.6.39-1_arm64.deb ... 182s Unpacking r-cran-digest (0.6.39-1) ... 182s Selecting previously unselected package r-cran-htmltools. 182s Preparing to unpack .../167-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 182s Unpacking r-cran-htmltools (0.5.8.1-1) ... 182s Selecting previously unselected package r-cran-jquerylib. 182s Preparing to unpack .../168-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 182s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 182s Selecting previously unselected package r-cran-jsonlite. 182s Preparing to unpack .../169-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 182s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 182s Selecting previously unselected package r-cran-memoise. 182s Preparing to unpack .../170-r-cran-memoise_2.0.1-1build1_all.deb ... 182s Unpacking r-cran-memoise (2.0.1-1build1) ... 182s Selecting previously unselected package r-cran-mime. 182s Preparing to unpack .../171-r-cran-mime_0.12-2_arm64.deb ... 182s Unpacking r-cran-mime (0.12-2) ... 182s Selecting previously unselected package r-cran-fs. 182s Preparing to unpack .../172-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 182s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 182s Selecting previously unselected package r-cran-rappdirs. 182s Preparing to unpack .../173-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 182s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 182s Selecting previously unselected package r-cran-sass. 182s Preparing to unpack .../174-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 182s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 182s Selecting previously unselected package r-cran-bslib. 182s Preparing to unpack .../175-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 182s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 182s Selecting previously unselected package r-cran-cairo. 182s Preparing to unpack .../176-r-cran-cairo_1.6-2-1_arm64.deb ... 182s Unpacking r-cran-cairo (1.6-2-1) ... 182s Selecting previously unselected package r-cran-ps. 182s Preparing to unpack .../177-r-cran-ps_1.9.0-1_arm64.deb ... 182s Unpacking r-cran-ps (1.9.0-1) ... 183s Selecting previously unselected package r-cran-processx. 183s Preparing to unpack .../178-r-cran-processx_3.8.6-1_arm64.deb ... 183s Unpacking r-cran-processx (3.8.6-1) ... 183s Selecting previously unselected package r-cran-callr. 183s Preparing to unpack .../179-r-cran-callr_3.7.6-1_all.deb ... 183s Unpacking r-cran-callr (3.7.6-1) ... 183s Selecting previously unselected package r-cran-cftime. 183s Preparing to unpack .../180-r-cran-cftime_1.7.2-1_all.deb ... 183s Unpacking r-cran-cftime (1.7.2-1) ... 183s Selecting previously unselected package r-cran-cluster. 183s Preparing to unpack .../181-r-cran-cluster_2.1.8.1-1_arm64.deb ... 183s Unpacking r-cran-cluster (2.1.8.1-1) ... 183s Selecting previously unselected package r-cran-clue. 183s Preparing to unpack .../182-r-cran-clue_0.3-66-1_arm64.deb ... 183s Unpacking r-cran-clue (0.3-66-1) ... 183s Selecting previously unselected package r-cran-codetools. 183s Preparing to unpack .../183-r-cran-codetools_0.2-20-1build1_all.deb ... 183s Unpacking r-cran-codetools (0.2-20-1build1) ... 183s Selecting previously unselected package r-cran-collapse. 183s Preparing to unpack .../184-r-cran-collapse_2.1.0-1_arm64.deb ... 183s Unpacking r-cran-collapse (2.1.0-1) ... 183s Selecting previously unselected package r-cran-commonmark. 183s Preparing to unpack .../185-r-cran-commonmark_1.9.5-1_arm64.deb ... 183s Unpacking r-cran-commonmark (1.9.5-1) ... 183s Selecting previously unselected package r-cran-lazyeval. 183s Preparing to unpack .../186-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 183s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 183s Selecting previously unselected package r-cran-rex. 183s Preparing to unpack .../187-r-cran-rex_1.2.1-1build1_all.deb ... 183s Unpacking r-cran-rex (1.2.1-1build1) ... 183s Selecting previously unselected package r-cran-curl. 183s Preparing to unpack .../188-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 183s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 183s Selecting previously unselected package r-cran-openssl. 183s Preparing to unpack .../189-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 183s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 183s Selecting previously unselected package r-cran-httr. 183s Preparing to unpack .../190-r-cran-httr_1.4.7+dfsg-1_all.deb ... 183s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 183s Selecting previously unselected package r-cran-crayon. 183s Preparing to unpack .../191-r-cran-crayon_1.5.3-1_all.deb ... 183s Unpacking r-cran-crayon (1.5.3-1) ... 183s Selecting previously unselected package r-cran-yaml. 183s Preparing to unpack .../192-r-cran-yaml_2.3.10-1_arm64.deb ... 183s Unpacking r-cran-yaml (2.3.10-1) ... 183s Selecting previously unselected package r-cran-covr. 183s Preparing to unpack .../193-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 183s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 183s Selecting previously unselected package r-cran-cpp11. 183s Preparing to unpack .../194-r-cran-cpp11_0.5.3-1_all.deb ... 183s Unpacking r-cran-cpp11 (0.5.3-1) ... 184s Selecting previously unselected package r-cran-cubelyr. 184s Preparing to unpack .../195-r-cran-cubelyr_1.0.2-1_all.deb ... 184s Unpacking r-cran-cubelyr (1.0.2-1) ... 184s Selecting previously unselected package r-cran-deldir. 184s Preparing to unpack .../196-r-cran-deldir_2.0-4-1build1_arm64.deb ... 184s Unpacking r-cran-deldir (2.0-4-1build1) ... 184s Selecting previously unselected package r-cran-desc. 184s Preparing to unpack .../197-r-cran-desc_1.4.3-1_all.deb ... 184s Unpacking r-cran-desc (1.4.3-1) ... 184s Selecting previously unselected package r-cran-diffobj. 184s Preparing to unpack .../198-r-cran-diffobj_0.3.5-1build1_arm64.deb ... 184s Unpacking r-cran-diffobj (0.3.5-1build1) ... 184s Selecting previously unselected package r-cran-evaluate. 184s Preparing to unpack .../199-r-cran-evaluate_1.0.3-1_all.deb ... 184s Unpacking r-cran-evaluate (1.0.3-1) ... 184s Selecting previously unselected package r-cran-lattice. 184s Preparing to unpack .../200-r-cran-lattice_0.22-7-1_arm64.deb ... 184s Unpacking r-cran-lattice (0.22-7-1) ... 184s Selecting previously unselected package r-cran-sp. 184s Preparing to unpack .../201-r-cran-sp_1%3a2.2-0+dfsg-1_arm64.deb ... 184s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 184s Selecting previously unselected package r-cran-terra. 184s Preparing to unpack .../202-r-cran-terra_1.8-70-1build2_arm64.deb ... 184s Unpacking r-cran-terra (1.8-70-1build2) ... 184s Selecting previously unselected package r-cran-raster. 184s Preparing to unpack .../203-r-cran-raster_3.6-32-1_arm64.deb ... 184s Unpacking r-cran-raster (3.6-32-1) ... 184s Selecting previously unselected package r-cran-exactextractr. 184s Preparing to unpack .../204-r-cran-exactextractr_0.10.0-1build2_arm64.deb ... 184s Unpacking r-cran-exactextractr (0.10.0-1build2) ... 184s Selecting previously unselected package r-cran-farver. 184s Preparing to unpack .../205-r-cran-farver_2.1.2-1_arm64.deb ... 184s Unpacking r-cran-farver (2.1.2-1) ... 184s Selecting previously unselected package r-cran-fnn. 184s Preparing to unpack .../206-r-cran-fnn_1.1.4.1-1_arm64.deb ... 184s Unpacking r-cran-fnn (1.1.4.1-1) ... 184s Selecting previously unselected package r-cran-fontawesome. 184s Preparing to unpack .../207-r-cran-fontawesome_0.5.3-1_all.deb ... 184s Unpacking r-cran-fontawesome (0.5.3-1) ... 184s Selecting previously unselected package r-cran-formula. 184s Preparing to unpack .../208-r-cran-formula_1.2-5-1_all.deb ... 184s Unpacking r-cran-formula (1.2-5-1) ... 184s Selecting previously unselected package r-cran-globals. 184s Preparing to unpack .../209-r-cran-globals_0.18.0-1_all.deb ... 184s Unpacking r-cran-globals (0.18.0-1) ... 185s Selecting previously unselected package r-cran-listenv. 185s Preparing to unpack .../210-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 185s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 185s Selecting previously unselected package r-cran-parallelly. 185s Preparing to unpack .../211-r-cran-parallelly_1.42.0-1_arm64.deb ... 185s Unpacking r-cran-parallelly (1.42.0-1) ... 185s Selecting previously unselected package r-cran-future. 185s Preparing to unpack .../212-r-cran-future_1.34.0+dfsg-1_all.deb ... 185s Unpacking r-cran-future (1.34.0+dfsg-1) ... 185s Selecting previously unselected package r-cran-future.apply. 185s Preparing to unpack .../213-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 185s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 185s Selecting previously unselected package r-cran-gtable. 185s Preparing to unpack .../214-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 185s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 185s Selecting previously unselected package r-cran-isoband. 185s Preparing to unpack .../215-r-cran-isoband_0.2.7-1_arm64.deb ... 185s Unpacking r-cran-isoband (0.2.7-1) ... 185s Selecting previously unselected package r-cran-nlme. 185s Preparing to unpack .../216-r-cran-nlme_3.1.168-1_arm64.deb ... 185s Unpacking r-cran-nlme (3.1.168-1) ... 185s Selecting previously unselected package r-cran-matrix. 185s Preparing to unpack .../217-r-cran-matrix_1.7-4-1_arm64.deb ... 185s Unpacking r-cran-matrix (1.7-4-1) ... 185s Selecting previously unselected package r-cran-mgcv. 185s Preparing to unpack .../218-r-cran-mgcv_1.9-4-1_arm64.deb ... 185s Unpacking r-cran-mgcv (1.9-4-1) ... 185s Selecting previously unselected package r-cran-labeling. 185s Preparing to unpack .../219-r-cran-labeling_0.4.3-1_all.deb ... 185s Unpacking r-cran-labeling (0.4.3-1) ... 185s Selecting previously unselected package r-cran-rcolorbrewer. 185s Preparing to unpack .../220-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 185s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 185s Selecting previously unselected package r-cran-viridislite. 185s Preparing to unpack .../221-r-cran-viridislite_0.4.2-2_all.deb ... 185s Unpacking r-cran-viridislite (0.4.2-2) ... 185s Selecting previously unselected package r-cran-scales. 185s Preparing to unpack .../222-r-cran-scales_1.4.0-1_all.deb ... 185s Unpacking r-cran-scales (1.4.0-1) ... 185s Selecting previously unselected package r-cran-ggplot2. 185s Preparing to unpack .../223-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 185s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 186s Selecting previously unselected package r-cran-tweenr. 186s Preparing to unpack .../224-r-cran-tweenr_2.0.3-1_arm64.deb ... 186s Unpacking r-cran-tweenr (2.0.3-1) ... 186s Selecting previously unselected package r-cran-polyclip. 186s Preparing to unpack .../225-r-cran-polyclip_1.10-7-1_arm64.deb ... 186s Unpacking r-cran-polyclip (1.10-7-1) ... 186s Selecting previously unselected package r-cran-systemfonts. 186s Preparing to unpack .../226-r-cran-systemfonts_1.2.1-1_arm64.deb ... 186s Unpacking r-cran-systemfonts (1.2.1-1) ... 186s Selecting previously unselected package r-cran-rcppeigen. 186s Preparing to unpack .../227-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 186s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 186s Selecting previously unselected package r-cran-ggforce. 186s Preparing to unpack .../228-r-cran-ggforce_0.4.2-1_arm64.deb ... 186s Unpacking r-cran-ggforce (0.4.2-1) ... 186s Selecting previously unselected package r-cran-stringi. 186s Preparing to unpack .../229-r-cran-stringi_1.8.4-1build2_arm64.deb ... 186s Unpacking r-cran-stringi (1.8.4-1build2) ... 186s Selecting previously unselected package r-cran-stringr. 186s Preparing to unpack .../230-r-cran-stringr_1.5.1-1_all.deb ... 186s Unpacking r-cran-stringr (1.5.1-1) ... 186s Selecting previously unselected package r-cran-ggthemes. 186s Preparing to unpack .../231-r-cran-ggthemes_5.2.0-1_all.deb ... 186s Unpacking r-cran-ggthemes (5.2.0-1) ... 186s Selecting previously unselected package r-cran-goftest. 186s Preparing to unpack .../232-r-cran-goftest_1.2-3-1build1_arm64.deb ... 186s Unpacking r-cran-goftest (1.2-3-1build1) ... 186s Selecting previously unselected package r-cran-gridextra. 186s Preparing to unpack .../233-r-cran-gridextra_2.3-3build2_all.deb ... 186s Unpacking r-cran-gridextra (2.3-3build2) ... 186s Selecting previously unselected package r-cran-zoo. 186s Preparing to unpack .../234-r-cran-zoo_1.8-15-1_arm64.deb ... 186s Unpacking r-cran-zoo (1.8-15-1) ... 186s Selecting previously unselected package r-cran-sftime. 186s Preparing to unpack .../235-r-cran-sftime_0.2-0-6_all.deb ... 186s Unpacking r-cran-sftime (0.2-0-6) ... 186s Selecting previously unselected package r-cran-xts. 186s Preparing to unpack .../236-r-cran-xts_0.14.1-1_arm64.deb ... 186s Unpacking r-cran-xts (0.14.1-1) ... 186s Selecting previously unselected package r-cran-intervals. 186s Preparing to unpack .../237-r-cran-intervals_0.15.5-1_arm64.deb ... 186s Unpacking r-cran-intervals (0.15.5-1) ... 186s Selecting previously unselected package r-cran-spacetime. 186s Preparing to unpack .../238-r-cran-spacetime_1.3-3-2_all.deb ... 186s Unpacking r-cran-spacetime (1.3-3-2) ... 186s Selecting previously unselected package r-cran-stars. 187s Preparing to unpack .../239-r-cran-stars_0.6-8-1_all.deb ... 187s Unpacking r-cran-stars (0.6-8-1) ... 187s Selecting previously unselected package r-cran-gstat. 187s Preparing to unpack .../240-r-cran-gstat_2.1-3-2_arm64.deb ... 187s Unpacking r-cran-gstat (2.1-3-2) ... 187s Selecting previously unselected package r-cran-xfun. 187s Preparing to unpack .../241-r-cran-xfun_0.55+dfsg-1_arm64.deb ... 187s Unpacking r-cran-xfun (0.55+dfsg-1) ... 187s Selecting previously unselected package r-cran-highr. 187s Preparing to unpack .../242-r-cran-highr_0.11+dfsg-1_all.deb ... 187s Unpacking r-cran-highr (0.11+dfsg-1) ... 187s Selecting previously unselected package r-cran-later. 187s Preparing to unpack .../243-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 187s Unpacking r-cran-later (1.4.1+dfsg-1) ... 187s Selecting previously unselected package r-cran-promises. 187s Preparing to unpack .../244-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 187s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 187s Selecting previously unselected package r-cran-httpuv. 187s Preparing to unpack .../245-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 187s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 187s Selecting previously unselected package libjs-mathjax. 187s Preparing to unpack .../246-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 187s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 187s Selecting previously unselected package r-cran-knitr. 187s Preparing to unpack .../247-r-cran-knitr_1.51+dfsg-1_all.deb ... 187s Unpacking r-cran-knitr (1.51+dfsg-1) ... 187s Selecting previously unselected package r-cran-lmtest. 188s Preparing to unpack .../248-r-cran-lmtest_0.9.40-1build1_arm64.deb ... 188s Unpacking r-cran-lmtest (0.9.40-1build1) ... 188s Selecting previously unselected package r-cran-lwgeom. 188s Preparing to unpack .../249-r-cran-lwgeom_0.2-14-1_arm64.deb ... 188s Unpacking r-cran-lwgeom (0.2-14-1) ... 188s Selecting previously unselected package r-cran-maps. 188s Preparing to unpack .../250-r-cran-maps_3.4.2.1-1_arm64.deb ... 188s Unpacking r-cran-maps (3.4.2.1-1) ... 188s Selecting previously unselected package r-cran-mapdata. 188s Preparing to unpack .../251-r-cran-mapdata_2.3.1-1_arm64.deb ... 188s Unpacking r-cran-mapdata (2.3.1-1) ... 188s Selecting previously unselected package r-cran-misctools. 188s Preparing to unpack .../252-r-cran-misctools_0.6-28-1_all.deb ... 188s Unpacking r-cran-misctools (0.6-28-1) ... 188s Selecting previously unselected package r-cran-sandwich. 188s Preparing to unpack .../253-r-cran-sandwich_3.1-1-1_all.deb ... 188s Unpacking r-cran-sandwich (3.1-1-1) ... 188s Selecting previously unselected package r-cran-maxlik. 188s Preparing to unpack .../254-r-cran-maxlik_1.5-2.2-1_all.deb ... 188s Unpacking r-cran-maxlik (1.5-2.2-1) ... 188s Selecting previously unselected package r-cran-rnetcdf. 189s Preparing to unpack .../255-r-cran-rnetcdf_2.9-2-1_arm64.deb ... 189s Unpacking r-cran-rnetcdf (2.9-2-1) ... 189s Selecting previously unselected package r-cran-tidyr. 189s Preparing to unpack .../256-r-cran-tidyr_1.3.1-1_arm64.deb ... 189s Unpacking r-cran-tidyr (1.3.1-1) ... 189s Selecting previously unselected package r-cran-ncmeta. 189s Preparing to unpack .../257-r-cran-ncmeta_0.4.0-1_all.deb ... 189s Unpacking r-cran-ncmeta (0.4.0-1) ... 189s Selecting previously unselected package r-cran-ncdfgeom. 189s Preparing to unpack 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unselected package r-cran-rbibutils. 189s Preparing to unpack .../264-r-cran-rbibutils_2.3-1_arm64.deb ... 189s Unpacking r-cran-rbibutils (2.3-1) ... 189s Selecting previously unselected package r-cran-rdpack. 189s Preparing to unpack .../265-r-cran-rdpack_2.6.3-1_all.deb ... 189s Unpacking r-cran-rdpack (2.6.3-1) ... 189s Selecting previously unselected package r-cran-plm. 189s Preparing to unpack .../266-r-cran-plm_2.6-7-1_all.deb ... 189s Unpacking r-cran-plm (2.6-7-1) ... 189s Selecting previously unselected package r-cran-praise. 189s Preparing to unpack .../267-r-cran-praise_1.0.0-4build2_all.deb ... 189s Unpacking r-cran-praise (1.0.0-4build2) ... 189s Selecting previously unselected package r-cran-randomforest. 190s Preparing to unpack .../268-r-cran-randomforest_4.7-1.2-1_arm64.deb ... 190s Unpacking r-cran-randomforest (4.7-1.2-1) ... 190s Selecting previously unselected package r-cran-tinytex. 190s Preparing to unpack .../269-r-cran-tinytex_0.58-1_all.deb ... 190s Unpacking 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r-cran-parallelly (1.42.0-1) ... 197s Setting up r-cran-stringi (1.8.4-1build2) ... 197s Setting up r-cran-rex (1.2.1-1build1) ... 197s Setting up r-cran-cpp11 (0.5.3-1) ... 197s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ... 197s Setting up r-cran-isoband (0.2.7-1) ... 197s Setting up r-cran-waldo (0.6.2-1) ... 197s Setting up r-cran-scales (1.4.0-1) ... 197s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 197s Setting up r-cran-zoo (1.8-15-1) ... 197s Setting up r-cran-units (0.8-7+dfsg-2) ... 197s Setting up r-cran-later (1.4.1+dfsg-1) ... 197s Setting up r-cran-matrix (1.7-4-1) ... 197s Setting up r-cran-spatstat.sparse (3.1-0-1) ... 197s Setting up r-cran-htmltools (0.5.8.1-1) ... 197s Setting up r-cran-tinytex (0.58-1) ... 197s Setting up r-cran-kernsmooth (2.23-26-1build1) ... 197s Setting up r-cran-knitr (1.51+dfsg-1) ... 197s Setting up r-cran-mgcv (1.9-4-1) ... 197s Setting up r-cran-cachem (1.1.0-1) ... 197s Setting up r-cran-lmtest (0.9.40-1build1) ... 197s Setting up r-cran-sass (0.4.9+dfsg-1) ... 197s Setting up r-cran-globals (0.18.0-1) ... 197s Setting up r-cran-vctrs (0.6.5-1) ... 197s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... 197s Setting up r-cran-pillar (1.11.1+dfsg-1) ... 197s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 197s Setting up r-cran-misctools (0.6-28-1) ... 197s Setting up r-cran-stringr (1.5.1-1) ... 197s Setting up r-cran-class (7.3-23-1) ... 197s Setting up r-cran-callr (3.7.6-1) ... 197s Setting up r-cran-desc (1.4.3-1) ... 197s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 197s Setting up r-cran-sandwich (3.1-1-1) ... 197s Setting up r-cran-fontawesome (0.5.3-1) ... 197s Setting up r-cran-survival (3.8-3-1) ... 197s Setting up r-cran-xts (0.14.1-1) ... 197s Setting up r-cran-rdpack (2.6.3-1) ... 197s Setting up r-cran-tweenr (2.0.3-1) ... 197s Setting up r-cran-future (1.34.0+dfsg-1) ... 197s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ... 197s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 197s Setting up r-cran-future.apply (1.11.3+dfsg-1) ... 197s Setting up r-cran-systemfonts (1.2.1-1) ... 197s Setting up r-cran-httr (1.4.7+dfsg-1) ... 197s Setting up r-cran-gridextra (2.3-3build2) ... 197s Setting up r-cran-memoise (2.0.1-1build1) ... 197s Setting up r-cran-covr (3.6.4+dfsg-1) ... 197s Setting up r-cran-promises (1.3.2+dfsg-1) ... 197s Setting up r-cran-purrr (1.0.4-1) ... 197s Setting up r-cran-e1071 (1.7-17-1) ... 197s Setting up r-cran-spatstat.data (3.1-6-1) ... 197s Setting up r-cran-maxlik (1.5-2.2-1) ... 197s Setting up r-cran-spacetime (1.3-3-2) ... 197s Setting up r-cran-spatstat.geom (3.3-6-1) ... 197s Setting up r-cran-pkgbuild (1.4.8-1) ... 197s Setting up r-cran-dplyr (1.1.4-4) ... 197s Setting up r-cran-cubelyr (1.0.2-1) ... 197s Setting up r-cran-pkgload (1.4.1-1) ... 197s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 197s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 197s Setting up r-cran-rpart (4.1.24-1) ... 197s Setting up r-cran-spatstat.random (3.3-3-1) ... 197s Setting up r-cran-plm (2.6-7-1) ... 197s Setting up r-cran-viridis (0.6.5-1) ... 197s Setting up r-cran-testthat (3.2.3-1) ... 197s Setting up r-cran-classint (0.4-11+dfsg-1) ... 197s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 197s Setting up r-cran-spatstat.explore (3.3-4-1) ... 197s Setting up r-cran-ggthemes (5.2.0-1) ... 197s Setting up r-cran-tidyr (1.3.1-1) ... 197s Setting up r-cran-ggforce (0.4.2-1) ... 197s Setting up r-cran-spatstat.model (3.3-4-1) ... 197s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 197s Setting up r-cran-ncmeta (0.4.0-1) ... 197s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 197s Setting up r-cran-spatstat.linnet (3.2-5-1) ... 197s Setting up r-cran-spatstat (3.3-1-1) ... 197s Setting up libheif-plugin-aomdec:arm64 (1.21.2-1) ... 197s Setting up libheif-plugin-libde265:arm64 (1.21.2-1) ... 197s Setting up libheif1:arm64 (1.21.2-1) ... 197s Setting up libgdal38:arm64 (3.12.1+dfsg-1) ... 197s Setting up r-cran-terra (1.8-70-1build2) ... 197s Setting up r-cran-sf (1.0-19+dfsg-2build2) ... 197s Setting up r-cran-stars (0.6-8-1) ... 197s Setting up r-cran-sftime (0.2-0-6) ... 197s Setting up r-cran-areal (0.1.8+dfsg-2) ... 197s Setting up r-cran-gstat (2.1-3-2) ... 197s Setting up r-cran-raster (3.6-32-1) ... 197s Setting up r-cran-lwgeom (0.2-14-1) ... 197s Setting up r-cran-exactextractr (0.10.0-1build2) ... 197s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... 197s Processing triggers for libc-bin (2.42-2ubuntu4) ... 197s Processing triggers for man-db (2.13.1-1) ... 198s Processing triggers for install-info (7.2-5) ... 199s autopkgtest [17:54:55]: test run-unit-test: [----------------------- 199s BEGIN TEST aggregate.R 199s 199s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 199s Copyright (C) 2025 The R Foundation for Statistical Computing 199s Platform: aarch64-unknown-linux-gnu 199s 199s R is free software and comes with ABSOLUTELY NO WARRANTY. 199s You are welcome to redistribute it under certain conditions. 199s Type 'license()' or 'licence()' for distribution details. 199s 199s R is a collaborative project with many contributors. 199s Type 'contributors()' for more information and 199s 'citation()' on how to cite R or R packages in publications. 199s 199s Type 'demo()' for some demos, 'help()' for on-line help, or 199s 'help.start()' for an HTML browser interface to help. 199s Type 'q()' to quit R. 199s 199s > ## IGNORE_RDIFF_BEGIN 199s > library(stars) 199s Loading required package: abind 199s Loading required package: sf 200s Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.0; sf_use_s2() is TRUE 200s > ## IGNORE_RDIFF_END 200s > 200s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 200s + data(air) # this loads several datasets in .GlobalEnv 200s + dim(air) 200s + d = st_dimensions(station = st_set_crs(st_as_sfc(stations), 4326), time = dates) 200s + 200s + blocks = st_make_grid(st_as_sfc("POLYGON ((5.871619 47.26986, 15.03811 47.26986, 15.03811 55.05653, 5.871619 55.05653, 5.871619 47.26986))", crs = 4326), 200s + n = c(3,3)) 200s + 200s + print(aq <- st_as_stars(list(PM10 = air), dimensions = d)) 200s + print(a <- aggregate(aq, blocks, mean, na.rm = TRUE)) 200s + } 201s stars object with 2 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 201s PM10 0 9.921 14.792 17.69728 21.992 274.333 157659 201s dimension(s): 201s from to offset delta refsys point 201s station 1 70 NA NA WGS 84 TRUE 201s time 1 4383 1998-01-01 1 days Date FALSE 201s values 201s station POINT (9.585911 53.67057),...,POINT (9.446661 49.24068) 201s time NULL 201s stars object with 2 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 201s PM10 1 11 15.57425 18.1715 22.17197 183.271 8429 201s dimension(s): 201s from to offset delta refsys point 201s geometry 1 9 NA NA WGS 84 FALSE 201s time 1 4383 1998-01-01 1 days Date FALSE 201s values 201s geometry POLYGON ((5.871619 47.269...,...,POLYGON ((11.98261 52.460... 201s time NULL 201s > 201s > # adapted from ?read_stars: 201s > m = array(1:720, dim = c(x = 10, y = 12, t = 6)) # named dim 201s > st = st_as_stars(m) 201s > attr(st, "dimensions")$y$delta = -1 201s > attr(st, "dimensions")$y$offset = 12 201s > tm = as.Date("2019-02-19") + 1:6 201s > st = st_set_crs(st_set_dimensions(st, 3, values = tm), 4326) 201s > 201s > tmp = tempfile(fileext = ".tif") 201s > write_stars(st, tmp) 201s > 201s > (red <- setNames(read_stars(tmp, RasterIO = list(nXOff = 1, nYOff = 1, nXsize = 10, nYSize = 12, 201s + nBufXSize = 2, nBufYSize = 2)), "foo")) 201s stars object with 3 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s foo 33 199.25 365.5 365.5 531.75 698 201s dimension(s): 201s from to offset delta refsys point x/y 201s x 1 2 0 5 WGS 84 FALSE [x] 201s y 1 2 12 -6 WGS 84 FALSE [y] 201s band 1 6 NA NA NA NA 201s > 201s > sfc = st_set_crs(st_as_sfc(red, as_points = FALSE), st_crs(st)) 201s > (a = aggregate(st, st_sf(a = 1, geom = sfc), mean)) 201s stars object with 2 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s A1 28 194.25 360.5 360.5 526.75 693 201s dimension(s): 201s from to offset delta refsys point 201s geom 1 4 NA NA WGS 84 FALSE 201s t 1 6 2019-02-20 1 days Date FALSE 201s values 201s geom POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 201s t NULL 201s > (a = aggregate(st, sfc, mean)) 201s stars object with 2 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s A1 28 194.25 360.5 360.5 526.75 693 201s dimension(s): 201s from to offset delta refsys point 201s geometry 1 4 NA NA WGS 84 FALSE 201s t 1 6 2019-02-20 1 days Date FALSE 201s values 201s geometry POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 201s t NULL 201s > 201s > tm0 = as.Date("2019-02-19") + -1:8 201s > (a = aggregate(st, tm0, mean, na.rm = TRUE)) 201s stars object with 3 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 201s A1 1 180.75 360.5 360.5 540.25 720 480 201s dimension(s): 201s from to offset delta refsys point x/y 201s time 1 10 2019-02-18 1 days Date NA 201s x 1 10 0 1 WGS 84 FALSE [x] 201s y 1 12 12 -1 WGS 84 FALSE [y] 201s > (a = aggregate(st, "days", mean, na.rm = TRUE)) 201s stars object with 3 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s A1 1 180.75 360.5 360.5 540.25 720 201s dimension(s): 202s from to offset delta refsys point x/y 202s time 1 6 2019-02-20 1 days Date NA 202s x 1 10 0 1 WGS 84 FALSE [x] 202s y 1 12 12 -1 WGS 84 FALSE [y] 202s > yd = function(x) as.POSIXlt(x)$yday 202s > (a = aggregate(st, yd, mean, na.rm = TRUE)) 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s A1 1 180.75 360.5 360.5 540.25 720 202s dimension(s): 202s from to offset delta refsys point values x/y 202s geometry 1 6 NA NA NA NA 50,...,55 202s x 1 10 0 1 WGS 84 FALSE NULL [x] 202s y 1 12 12 -1 WGS 84 FALSE NULL [y] 202s > 202s > # with "by" geometry not overlapping x 202s > pt = st_point(c(-10,-10)) 202s > (sfc = c(sfc, st_sfc(pt, crs = st_crs(sfc)))) 202s Geometry set for 5 features 202s Geometry type: GEOMETRY 202s Dimension: XY 202s Bounding box: xmin: -10 ymin: -10 xmax: 10 ymax: 12 202s Geodetic CRS: WGS 84 202s POLYGON ((0 12, 5 12, 5 6, 0 6, 0 12)) 202s POLYGON ((5 12, 10 12, 10 6, 5 6, 5 12)) 202s POLYGON ((0 6, 5 6, 5 0, 0 0, 0 6)) 202s POLYGON ((5 6, 10 6, 10 0, 5 0, 5 6)) 202s POINT (-10 -10) 202s > (a = aggregate(st, sfc, mean)) 202s stars object with 2 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 202s A1 28 194.25 360.5 360.5 526.75 693 6 202s dimension(s): 202s from to offset delta refsys point 202s geometry 1 5 NA NA WGS 84 FALSE 202s t 1 6 2019-02-20 1 days Date FALSE 202s values 202s geometry POLYGON ((0 12, 5 12, 5 6...,...,POINT (-10 -10) 202s t NULL 202s > (a = aggregate(st, st, mean)) 202s stars object with 2 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s A1 1 180.75 360.5 360.5 540.25 720 202s dimension(s): 202s from to offset delta refsys point 202s geometry 1 120 NA NA WGS 84 FALSE 202s t 1 6 2019-02-20 1 days Date FALSE 202s values 202s geometry POLYGON ((0 12, 1 12, 1 1...,...,POLYGON ((9 1, 10 1, 10 0... 202s t NULL 202s > 202s BEGIN TEST align.R 202s 202s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 202s Copyright (C) 2025 The R Foundation for Statistical Computing 202s Platform: aarch64-unknown-linux-gnu 202s 202s R is free software and comes with ABSOLUTELY NO WARRANTY. 202s You are welcome to redistribute it under certain conditions. 202s Type 'license()' or 'licence()' for distribution details. 202s 202s R is a collaborative project with many contributors. 202s Type 'contributors()' for more information and 202s 'citation()' on how to cite R or R packages in publications. 202s 202s Type 'demo()' for some demos, 'help()' for on-line help, or 202s 'help.start()' for an HTML browser interface to help. 202s Type 'q()' to quit R. 202s 202s > suppressPackageStartupMessages(library(stars)) 202s > set.seed(1331) 202s > st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1) 203s Geometry set for 1 feature 203s Geometry type: POINT 203s Dimension: XY 203s Bounding box: xmin: 291430.8 ymin: 9111430 xmax: 291430.8 ymax: 9111430 203s Projected CRS: SIRGAS 2000 / UTM zone 25S 203s > b = st_buffer(st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1), 335) 203s POINT (291430.8 9111430) 203s > bba = stars:::st_align(st_bbox(b), st_dimensions(L7_ETMs)) 203s > 203s > plot(L7_ETMs[,,,1], extent = st_buffer(b, 20), reset = FALSE, key.pos = NULL) 203s > plot(b, add = TRUE, col = NA, border = 'red') 203s > plot(st_as_sfc(st_bbox(b)), col = NA, border = 'red', add = TRUE) 203s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 203s > st_bbox(b) 203s xmin ymin xmax ymax 203s 297116.8 9119404.1 297786.8 9120074.1 203s > bba 203s xmin ymin xmax ymax 203s 297098.3 9119392.8 297810.8 9120076.8 203s > 203s > plot(L7_ETMs[,,,1], reset = FALSE, key.pos = NULL) 203s > plot(b, col = 'red', add = TRUE) 203s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 203s > 203s > b0 = st_buffer(b, -100) 203s > L7 = st_as_stars(L7_ETMs)[b0][,,,1] |> st_normalize() 203s > bbb = stars:::st_align(st_bbox(b), st_dimensions(L7)) 203s > plot(L7, extent = st_buffer(b, 120), reset = FALSE, key.pos = NULL) 203s > plot(st_as_sfc(st_bbox(L7)), col = NA, border = 'black', add = TRUE) 203s > plot(st_as_sfc(bbb), col = NA, border = 'blue', add = TRUE) 203s > plot(b, col = NA, border = 'red', add = TRUE) 203s > 203s > all.equal(bbb, bba) 203s [1] TRUE 203s > 203s BEGIN TEST area.R 203s 203s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 203s Copyright (C) 2025 The R Foundation for Statistical Computing 203s Platform: aarch64-unknown-linux-gnu 203s 203s R is free software and comes with ABSOLUTELY NO WARRANTY. 203s You are welcome to redistribute it under certain conditions. 203s Type 'license()' or 'licence()' for distribution details. 203s 203s R is a collaborative project with many contributors. 203s Type 'contributors()' for more information and 203s 'citation()' on how to cite R or R packages in publications. 203s 203s Type 'demo()' for some demos, 'help()' for on-line help, or 203s 'help.start()' for an HTML browser interface to help. 203s Type 'q()' to quit R. 203s 203s > suppressPackageStartupMessages(library(stars)) 204s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 204s > x = read_stars(tif) 204s > (a = st_area(x[,1:5,1:5])) 204s stars object with 2 dimensions and 1 attribute 204s attribute(s): 204s Min. 1st Qu. Median Mean 3rd Qu. Max. 204s area [m^2] 812.25 812.25 812.25 812.25 812.25 812.25 204s dimension(s): 204s from to offset delta refsys point x/y 204s x 1 5 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 204s y 1 5 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 204s > 204s > m = matrix(1:20, nrow = 5, ncol = 4) 204s > x = c(0, 0.5, 1, 2, 4, 5) # 6 numbers: boundaries! 204s > y = c(0.3, 0.5, 1, 2, 2.2) # 5 numbers: boundaries! 204s > (r = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 204s stars object with 2 dimensions and 1 attribute 204s attribute(s): 204s Min. 1st Qu. Median Mean 3rd Qu. Max. 204s m 1 5.75 10.5 10.5 15.25 20 204s dimension(s): 204s from to point values x/y 204s x 1 5 FALSE [0,0.5),...,[4,5) [x] 204s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 204s > # image(r, axes = TRUE, col = grey((1:20)/20)) 204s > (a = st_area(r)) 204s Missing coordinate reference system: assuming Cartesian coordinates 204s stars object with 2 dimensions and 1 attribute 204s attribute(s): 204s Min. 1st Qu. Median Mean 3rd Qu. Max. 204s area 0.1 0.2 0.325 0.475 0.5 2 204s dimension(s): 204s from to point values x/y 204s x 1 5 FALSE [0,0.5),...,[4,5) [x] 204s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 204s > #plot(a, axes = TRUE) 204s > 204s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 204s > if (s5p != "") { 204s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 204s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 204s + if (inherits(nit.c[[1]], "units")) 204s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 204s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 204s + st_crs(nit.c) = 4326 204s + print((a <- st_area(nit.c[,1:5,1:5]))) 204s + # plot(a, axes = TRUE, border = NA) 204s + } 204s > 204s BEGIN TEST crop.R 204s 204s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 204s Copyright (C) 2025 The R Foundation for Statistical Computing 204s Platform: aarch64-unknown-linux-gnu 204s 204s R is free software and comes with ABSOLUTELY NO WARRANTY. 204s You are welcome to redistribute it under certain conditions. 204s Type 'license()' or 'licence()' for distribution details. 204s 204s R is a collaborative project with many contributors. 204s Type 'contributors()' for more information and 204s 'citation()' on how to cite R or R packages in publications. 204s 204s Type 'demo()' for some demos, 'help()' for on-line help, or 204s 'help.start()' for an HTML browser interface to help. 204s Type 'q()' to quit R. 204s 204s > suppressPackageStartupMessages(library(stars)) 205s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 205s > x = read_stars(tif) 205s > xy = structure(list(x = c(293253.999046018, 296400.196497684), y = c(9113801.64775462, 205s + 9111328.49619133)), .Names = c("x", "y")) 205s > pts = st_as_sf(data.frame(do.call(cbind, xy)), coords = c("x", "y"), crs = st_crs(x)) 205s > image(x, axes = TRUE) 205s > plot(st_as_sfc(st_bbox(pts)), col = NA, add = TRUE) 205s > 205s > bb = st_bbox(pts) 205s > (xx = x[bb]) 205s stars object with 3 dimensions and 1 attribute 205s attribute(s): 205s Min. 1st Qu. Median Mean 3rd Qu. Max. 205s L7_ETMs.tif 3 56 73 70.87303 89 255 205s dimension(s): 205s from to offset delta refsys point x/y 205s x 158 268 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 205s y 245 331 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 205s band 1 6 NA NA NA NA 205s > image(xx) 205s > plot(st_as_sfc(bb), add = TRUE, col = NA) 205s > st_contains(st_as_sfc(st_bbox(xx)), st_as_sfc(st_bbox(pts))) 205s Sparse geometry binary predicate list of length 1, where the predicate 205s was `contains' 205s 1: 1 205s > 205s > image(x) 205s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 205s > buf = st_buffer(st_sfc(pt, crs = st_crs(x)), 1500) 205s > plot(buf, add = TRUE) 205s > 205s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 205s + crs = st_crs(x)) 205s > image(x[buf]) 205s > plot(buf, add = TRUE, col = NA) 205s > image(x[buf,crop=FALSE]) 206s > plot(buf, add = TRUE, col = NA) 206s > 206s > plot(x, rgb = 1:3) 206s > 206s > # #638: 206s > l = st_as_stars(L7_ETMs) 206s > st_bbox(l) |> st_as_sfc() -> bb 206s > (bb + 1e6) |> st_set_crs(st_crs(l)) -> b 206s > st_crop(l, b) 207s stars object with 3 dimensions and 1 attribute 207s attribute(s): 207s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 207s L7_ETMs NA NA NA NaN NA NA 737088 207s dimension(s): 207s from to offset delta refsys point x/y 207s x Warning message: 207s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 207s 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 207s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 207s band 1 6 NA NA NA NA 207s > st_intersects(b, st_as_sfc(st_bbox(l))) |> as.matrix() 207s [,1] 207s [1,] FALSE 207s > (bb - 1e6) |> st_set_crs(st_crs(l)) -> b 207s > st_crop(l, b) 207s stars object with 3 dimensions and 1 attribute 207s attribute(s): 208s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 208s L7_ETMs NA NA NA NaN NA NA 737088 208s dimension(s): 208s from to offset delta refsys point x/y 208s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 208s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 208s band 1 6 NA NA NA NA 208s > 208s Warning message: 208s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 208s BEGIN TEST curvilinear.R 209s 209s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 209s Copyright (C) 2025 The R Foundation for Statistical Computing 209s Platform: aarch64-unknown-linux-gnu 209s 209s R is free software and comes with ABSOLUTELY NO WARRANTY. 209s You are welcome to redistribute it under certain conditions. 209s Type 'license()' or 'licence()' for distribution details. 209s 209s R is a collaborative project with many contributors. 209s Type 'contributors()' for more information and 209s 'citation()' on how to cite R or R packages in publications. 209s 209s Type 'demo()' for some demos, 'help()' for on-line help, or 209s 'help.start()' for an HTML browser interface to help. 209s Type 'q()' to quit R. 209s 209s > suppressPackageStartupMessages(library(stars)) 209s > 209s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 209s > if (s5p != "") { 209s + 209s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 209s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 209s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 209s + lat = read_stars(lat_ds) 209s + lon = read_stars(lon_ds) 209s + nit = read_stars(nit_ds) 209s + nit[[1]][nit[[1]] > 9e+36] = NA 209s + 209s + ll = setNames(c(lon, lat), c("x", "y")) 209s + nit.c0 = st_as_stars(nit, curvilinear = ll) 209s + 209s + # more direct method: 209s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 209s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 209s + if (inherits(nit.c[[1]], "units")) 209s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 209s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 209s + all.equal(nit.c0, nit.c) 209s + st_crs(nit.c) = 4326 209s + print(nit.c) 209s + 209s + if (FALSE && capabilities()["png"]) { 209s + png("nit1.png", 800, 800) 209s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 209s + maps::map('world', add = TRUE, col = 'red') 209s + dev.off() 209s + 209s + png("nit2.png", 800, 800) 209s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 209s + maps::map('world', add = TRUE, col = 'red') 209s + dev.off() 209s + 209s + nit.c = stars:::st_downsample(nit.c, 8) 209s + print(nit.c) 209s + 209s + png("nit3.png", 800, 800) 209s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 209s + maps::map('world', add = TRUE, col = 'red') 209s + dev.off() 209s + 209s + png("nit4.png", 800, 800) 209s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 209s + maps::map('world', add = TRUE, col = 'red') 209s + dev.off() 209s + } 209s + 209s + } 209s > 209s BEGIN TEST datasets.R 209s 209s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 209s Copyright (C) 2025 The R Foundation for Statistical Computing 209s Platform: aarch64-unknown-linux-gnu 209s 209s R is free software and comes with ABSOLUTELY NO WARRANTY. 209s You are welcome to redistribute it under certain conditions. 209s Type 'license()' or 'licence()' for distribution details. 209s 209s R is a collaborative project with many contributors. 209s Type 'contributors()' for more information and 209s 'citation()' on how to cite R or R packages in publications. 209s 209s Type 'demo()' for some demos, 'help()' for on-line help, or 209s 'help.start()' for an HTML browser interface to help. 209s Type 'q()' to quit R. 209s 209s > suppressPackageStartupMessages(library(stars)) 209s > bcsd_obs 209s stars_proxy object with 2 attributes in 2 file(s): 209s $foo 209s [1] "[...]/bcsd_obs_1999.nc:pr" 209s 209s $bar 209s [1] "[...]/bcsd_obs_1999.nc:tas" 209s 209s dimension(s): 209s from to offset delta refsys values x/y 209s x 1 81 -85 0.125 NA NULL [x] 209s y 1 33 37.12 -0.125 NA NULL [y] 209s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 209s > L7_ETMs 209s stars_proxy object with 1 attribute in 1 file(s): 209s $L7_ETMs 209s [1] "[...]/L7_ETMs.tif" 209s 209s dimension(s): 209s from to offset delta refsys point x/y 209s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 209s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 209s band 1 6 NA NA NA NA 209s > if (require(starsdata, quietly = TRUE)) { 209s + print(stars_sentinel2) 209s + } 209s > 209s BEGIN TEST dimensions.R 209s 209s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 209s Copyright (C) 2025 The R Foundation for Statistical Computing 209s Platform: aarch64-unknown-linux-gnu 209s 209s R is free software and comes with ABSOLUTELY NO WARRANTY. 209s You are welcome to redistribute it under certain conditions. 209s Type 'license()' or 'licence()' for distribution details. 209s 209s R is a collaborative project with many contributors. 209s Type 'contributors()' for more information and 209s 'citation()' on how to cite R or R packages in publications. 209s 209s Type 'demo()' for some demos, 'help()' for on-line help, or 209s 'help.start()' for an HTML browser interface to help. 209s Type 'q()' to quit R. 209s 209s > # https://github.com/r-spatial/stars/issues/295 209s > suppressPackageStartupMessages(library(stars)) 210s > raw <- read_stars(system.file("nc/bcsd_obs_1999.nc", package = "stars")) 210s pr, tas, 210s > foo <- function(x, idx) stats::lowess(idx, x)$y 210s > 210s > timeline <- st_get_dimension_values(raw, "time") 210s > smooth = st_apply(raw, 210s + MARGIN = c("x", "y"), 210s + FUN = foo, 210s + idx = st_get_dimension_values(raw, "time") 210s + ) 210s > 210s > st_set_dimensions(smooth, 210s + which = "foo", 210s + values = st_get_dimension_values(raw, "time"), 210s + names = "time" 210s + ) 210s stars object with 3 dimensions and 2 attributes 210s attribute(s): 210s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 210s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 210s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 210s dimension(s): 211s from to offset delta refsys values x/y 211s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 211s x 1 81 -85 0.125 NA NULL [x] 211s y 1 33 37.12 -0.125 NA NULL [y] 211s > 211s > raw %>% 211s + st_apply(MARGIN = c("x", "y"), FUN = foo, idx = timeline) %>% 211s + st_set_dimensions("foo", st_dimensions(raw)["time"]) 211s stars object with 3 dimensions and 2 attributes 211s attribute(s): 211s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 211s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 211s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 211s dimension(s): 211s from to offset delta refsys values x/y 211s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 211s x 1 81 -85 0.125 NA NULL [x] 211s y 1 33 37.12 -0.125 NA NULL [y] 211s > 211s BEGIN TEST downsample.R 211s 211s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 211s Copyright (C) 2025 The R Foundation for Statistical Computing 211s Platform: aarch64-unknown-linux-gnu 211s 211s R is free software and comes with ABSOLUTELY NO WARRANTY. 211s You are welcome to redistribute it under certain conditions. 211s Type 'license()' or 'licence()' for distribution details. 211s 211s R is a collaborative project with many contributors. 211s Type 'contributors()' for more information and 211s 'citation()' on how to cite R or R packages in publications. 211s 211s Type 'demo()' for some demos, 'help()' for on-line help, or 211s 'help.start()' for an HTML browser interface to help. 211s Type 'q()' to quit R. 211s 211s > suppressPackageStartupMessages(library(stars)) 212s > m = matrix(1:121, 11, 11) 212s > m 212s [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] 212s [1,] 1 12 23 34 45 56 67 78 89 100 111 212s [2,] 2 13 24 35 46 57 68 79 90 101 112 212s [3,] 3 14 25 36 47 58 69 80 91 102 113 212s [4,] 4 15 26 37 48 59 70 81 92 103 114 212s [5,] 5 16 27 38 49 60 71 82 93 104 115 212s [6,] 6 17 28 39 50 61 72 83 94 105 116 212s [7,] 7 18 29 40 51 62 73 84 95 106 117 212s [8,] 8 19 30 41 52 63 74 85 96 107 118 212s [9,] 9 20 31 42 53 64 75 86 97 108 119 212s [10,] 10 21 32 43 54 65 76 87 98 109 120 212s [11,] 11 22 33 44 55 66 77 88 99 110 121 212s > s = st_as_stars(m) 212s > st_downsample(s, 1) 212s stars object with 2 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. 212s A1 1 28.5 61 61 93.5 121 212s dimension(s): 212s from to offset delta point x/y 212s X1 1 6 0 2 FALSE [x] 212s X2 1 6 0 2 FALSE [y] 212s > st_downsample(s, 1)[[1]] 212s [,1] [,2] [,3] [,4] [,5] [,6] 212s [1,] 1 23 45 67 89 111 212s [2,] 3 25 47 69 91 113 212s [3,] 5 27 49 71 93 115 212s [4,] 7 29 51 73 95 117 212s [5,] 9 31 53 75 97 119 212s [6,] 11 33 55 77 99 121 212s > st_downsample(s, 1, offset = 1) 212s stars object with 2 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. 212s A1 13 37 61 61 85 109 212s dimension(s): 212s from to offset delta point x/y 212s X1 1 5 1 2 FALSE [x] 212s X2 1 5 1 2 FALSE [y] 212s > st_downsample(s, 1, offset = 1)[[1]] 212s [,1] [,2] [,3] [,4] [,5] 212s [1,] 13 35 57 79 101 212s [2,] 15 37 59 81 103 212s [3,] 17 39 61 83 105 212s [4,] 19 41 63 85 107 212s [5,] 21 43 65 87 109 212s > st_downsample(s, 1, FUN = mean) 212s stars object with 2 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. 212s A1 7 31 55 55 79 103 212s dimension(s): 212s from to offset delta point x/y 212s X1 1 5 0 2 FALSE [x] 212s X2 1 5 0 2 FALSE [y] 212s > st_downsample(s, 1, FUN = mean)[[1]] 212s [,1] [,2] [,3] [,4] [,5] 212s [1,] 7 29 51 73 95 212s [2,] 9 31 53 75 97 212s [3,] 11 33 55 77 99 212s [4,] 13 35 57 79 101 212s [5,] 15 37 59 81 103 212s > st_downsample(s, 1, offset = 1, FUN = mean) 212s stars object with 2 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. 212s A1 19 43 67 67 91 115 212s dimension(s): 212s from to offset delta point x/y 212s X1 1 5 1 2 FALSE [x] 212s X2 1 5 1 2 FALSE [y] 212s > st_downsample(s, 1, offset = c(0,1), FUN = mean)[[1]] 212s [,1] [,2] [,3] [,4] [,5] 212s [1,] 18 40 62 84 106 212s [2,] 20 42 64 86 108 212s [3,] 22 44 66 88 110 212s [4,] 24 46 68 90 112 212s [5,] 26 48 70 92 114 212s > st_downsample(s, 1, offset = c(0,1)) 212s stars object with 2 dimensions and 1 attribute 212s attribute(s): 212s Min. 1st Qu. Median Mean 3rd Qu. Max. 212s A1 12 36.5 61 61 85.5 110 212s dimension(s): 212s from to offset delta point x/y 212s X1 1 6 0 2 FALSE [x] 212s X2 1 5 1 2 FALSE [y] 212s > st_downsample(s, 1, offset = c(0,1))[[1]] 212s [,1] [,2] [,3] [,4] [,5] 212s [1,] 12 34 56 78 100 212s [2,] 14 36 58 80 102 212s [3,] 16 38 60 82 104 212s [4,] 18 40 62 84 106 212s [5,] 20 42 64 86 108 212s [6,] 22 44 66 88 110 212s > 212s BEGIN TEST ee.R 212s 212s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 212s Copyright (C) 2025 The R Foundation for Statistical Computing 212s Platform: aarch64-unknown-linux-gnu 212s 212s R is free software and comes with ABSOLUTELY NO WARRANTY. 212s You are welcome to redistribute it under certain conditions. 212s Type 'license()' or 'licence()' for distribution details. 212s 212s R is a collaborative project with many contributors. 212s Type 'contributors()' for more information and 212s 'citation()' on how to cite R or R packages in publications. 212s 212s Type 'demo()' for some demos, 'help()' for on-line help, or 212s 'help.start()' for an HTML browser interface to help. 212s Type 'q()' to quit R. 212s 212s > # show that extract with exact=TRUE equals st_interpolate_aw(), only much faster 212s > options(digits=15) 212s > suppressPackageStartupMessages(library(stars)) 212s > L = st_as_stars(L7_ETMs)[,,,1] 212s > set.seed(123432) 212s > st_bbox(L) |> 212s + st_as_sfc() |> 212s + st_centroid() |> 212s + st_buffer(50) |> 212s + st_sample(10) |> 212s + st_combine() |> 212s + st_convex_hull() -> ch 213s > if (interactive()) { 213s + plot(L, reset = FALSE) 213s + plot(ch, add = TRUE, border = 'red', col = NA) 213s + } 213s > if (FALSE) { 213s + e = st_extract(L, ch)[[1]] 213s + a = aggregate(L, ch, mean)[[1]] 213s + identical(e, a) # same code path 213s + ee = aggregate(L, ch, mean, exact = TRUE)[[1]] 213s + all.equal(e, ee) 213s + aw = suppressWarnings(st_interpolate_aw(L, ch, extensive = FALSE)$V1) 213s + all.equal(as.vector(ee), aw) 213s + ee0 = st_extract(L, ch, exact = TRUE)[[1]] 213s + all.equal(ee0, ee) # ?? 213s + } 213s > 213s BEGIN TEST extract.R 213s 213s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 213s Copyright (C) 2025 The R Foundation for Statistical Computing 213s Platform: aarch64-unknown-linux-gnu 213s 213s R is free software and comes with ABSOLUTELY NO WARRANTY. 213s You are welcome to redistribute it under certain conditions. 213s Type 'license()' or 'licence()' for distribution details. 213s 213s R is a collaborative project with many contributors. 213s Type 'contributors()' for more information and 213s 'citation()' on how to cite R or R packages in publications. 213s 213s Type 'demo()' for some demos, 'help()' for on-line help, or 213s 'help.start()' for an HTML browser interface to help. 213s Type 'q()' to quit R. 213s 213s > # Create 'stars' object 213s > set.seed(1331) 213s > suppressPackageStartupMessages(library(stars)) 213s > volcano = rbind(volcano, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA) # add NA rows 213s > d = st_dimensions(x = 1:ncol(volcano), y = 1:nrow(volcano)) 213s > (r = st_as_stars(t(volcano))) 213s stars object with 2 dimensions and 1 attribute 213s attribute(s): 213s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 213s A1 94 108 124 130.1879 150 195 732 213s dimension(s): 213s from to offset delta point x/y 213s X1 1 61 0 1 FALSE [x] 213s X2 1 99 0 1 FALSE [y] 213s > r = st_set_dimensions(r, 1, offset = 0, delta = 1) 213s > r = st_set_dimensions(r, 2, offset = nrow(volcano), delta = -1) 213s > 213s > # Create points 213s > pnt = st_sample(st_as_sfc(st_bbox(r)), 100) 213s > pnt = st_as_sf(pnt) 213s > 213s > # Extract - 'st_join' 213s > x = st_join(pnt, st_as_sf(r)) 213s > 213s > # Extract - 'st_extract' 213s > y = st_extract(r, pnt) 213s > 213s > # check there are NA's: 213s > any(is.na(x)) 213s [1] TRUE 213s > # Compare 213s > all.equal(x$A1, y[[1]]) 213s [1] TRUE 213s > 213s > ################################################ 213s > if (FALSE) { 213s + 213s + ## tic: segfaults 213s + # check equal results with stars_proxy: 213s + #x = st_extract(stars:::st_as_stars_proxy(r), pnt) 213s + #all.equal(x$A1, y[[1]]) 213s + #all.equal(x, y) 213s + 213s + r = c(r, 2*r, 10*r) 213s + x = st_join(pnt, st_as_sf(r)) 213s + y = st_as_sf(st_extract(r, pnt)) 213s + all.equal(x, y) 213s + 213s + ## tic: segfaults 213s + #x = st_extract(stars:::st_as_stars_proxy(merge(r)), pnt) 213s + #all.equal(st_as_sf(x), y) 213s + 213s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 213s + xp = read_stars(tif, proxy = TRUE) 213s + xm = read_stars(tif, proxy = FALSE) 213s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 213s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 213s + em = st_extract(xm, pts) 213s + if (utils::packageVersion("sf") >= "0.9-7") { 214s + ep = st_extract(xp, pts) 214s + print(all.equal(ep, em, check.attributes = TRUE)) 214s + } 214s + 214s + # two-attribute objects: 214s + library(stars) 214s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 214s + xp = read_stars(c(tif, tif), proxy = TRUE) 214s + xm = read_stars(c(tif, tif), proxy = FALSE) 214s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 214s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 214s + em = st_extract(xm, pts) 214s + if (utils::packageVersion("sf") >= "0.9-7") { 214s + ep = st_extract(xp, pts) 214s + print(all.equal(ep, em, check.attributes = TRUE)) 214s + } 214s + 214s + # single-attribute, single raster objects: 214s + tif1 = paste0(tempfile(), ".tif") 214s + write_stars(xm[1,,,1], "x.tif") 214s + xp = read_stars("x.tif", proxy = TRUE) 214s + xm = read_stars("x.tif", proxy = FALSE) 214s + em = st_extract(xm, pts) 214s + if (utils::packageVersion("sf") >= "0.9-7") { 214s + ep = st_extract(xp, pts) 214s + print(all.equal(ep, em, check.attributes = TRUE)) 214s + } 214s + 214s + # multiple-file attributes: 214s + x = c( 214s + "avhrr-only-v2.19810901.nc", 214s + "avhrr-only-v2.19810902.nc", 214s + "avhrr-only-v2.19810903.nc", 214s + "avhrr-only-v2.19810904.nc", 214s + "avhrr-only-v2.19810905.nc", 214s + "avhrr-only-v2.19810906.nc", 214s + "avhrr-only-v2.19810907.nc", 214s + "avhrr-only-v2.19810908.nc", 214s + "avhrr-only-v2.19810909.nc" 214s + ) 214s + file_list = system.file(paste0("netcdf/", x), package = "starsdata") 214s + if (!identical(file_list, "")) { 214s + y = read_stars(file_list, quiet = TRUE) 214s + print(y) 214s + st_crs(y) = "OGC:CRS84" 214s + pts = st_sample(st_as_sfc(st_bbox(y)), 10) 214s + em = st_extract(y, pts) 214s + 214s + (y = read_stars(file_list, quiet = TRUE, proxy = TRUE)) 214s + print(y) 214s + st_crs(y) = "OGC:CRS84" 214s + if (utils::packageVersion("sf") >= "0.9-7") { 214s + ep = st_extract(y, pts) 214s + print(all.equal(em, ep)) 214s + } 214s + } 214s + 214s + # nearest & bilinear comparison: 214s + if (utils::packageVersion("sf") >= "0.9-7") { 214s + set.seed(12331) 214s + s = st_as_stars(matrix(rnorm(16), 4)) 214s + pts = st_sample(st_as_sfc(st_bbox(s)), 10000, type = "regular") 214s + s1 = st_extract(s, pts, bilinear = FALSE) 214s + s2 = st_extract(s, pts, bilinear = TRUE) 214s + s1$s2 = s2[[1]] 214s + names(s1)[c(1,3)] = c("nearest", "bilinear") 214s + print(s1[sample(10000, 5),]) 214s + } 214s + } 214s > 214s BEGIN TEST gridtypes.R 214s 214s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 214s Copyright (C) 2025 The R Foundation for Statistical Computing 214s Platform: aarch64-unknown-linux-gnu 214s 214s R is free software and comes with ABSOLUTELY NO WARRANTY. 214s You are welcome to redistribute it under certain conditions. 214s Type 'license()' or 'licence()' for distribution details. 214s 214s R is a collaborative project with many contributors. 214s Type 'contributors()' for more information and 214s 'citation()' on how to cite R or R packages in publications. 214s 214s Type 'demo()' for some demos, 'help()' for on-line help, or 214s 'help.start()' for an HTML browser interface to help. 214s Type 'q()' to quit R. 214s 214s > suppressPackageStartupMessages(library(stars)) 215s > 215s > # regular, but not spatial: 215s > d = st_dimensions(a = 1:3, b = 1:3, band = c("foo", "bar")) 215s Error in st_bbox.dimensions(st_dimensions(obj), ...) : 215s dimensions table does not have x & y, nor an sfc dimension 215s Error in st_coordinates.stars(x, add_max = add_max, center = center, ...) : 215s add_max will not work for rotated/shared rasters 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values 215s a 1 3 1 1 FALSE NULL 215s b 1 3 1 1 FALSE NULL 215s band 1 2 NA NA FALSE foo, bar 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s a b band X 215s 1 1 1 foo 1 215s 2 2 1 foo 2 215s 3 3 1 foo 3 215s 4 1 2 foo 4 215s > try(x <- st_bbox(st)) # error 215s > 215s > # regular, geotransform: 215s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values x/y 215s x 1 3 1 1 FALSE NULL [x] 215s y 1 3 1 1 FALSE NULL [y] 215s band 1 2 NA NA FALSE foo, bar 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s x y band X 215s 1 1.5 1.5 foo 1 215s 2 2.5 1.5 foo 2 215s 3 3.5 1.5 foo 3 215s 4 1.5 2.5 foo 4 215s > as.data.frame(st, add_max=TRUE)[1:4,] 215s x y band x_max y_max X 215s 1 1 1 foo 2 2 1 215s 2 2 1 foo 3 2 2 215s 3 3 1 foo 4 2 3 215s 4 1 2 foo 2 3 4 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 1 1 4 4 215s > 215s > # rectilinear with offset given: 215s > xd = c(1, 2, 4) 215s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values x/y 215s x 1 3 NA NA FALSE [1,2), [2,4), [4,6) [x] 215s y 1 3 1 1 FALSE NULL [y] 215s band 1 2 NA NA FALSE foo, bar 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s x y band X 215s 1 1.5 1.5 foo 1 215s 2 3.0 1.5 foo 2 215s 3 5.0 1.5 foo 3 215s 4 1.5 2.5 foo 4 215s > as.data.frame(st, add_max=TRUE)[1:4,] 215s x y band x_max y_max X 215s 1 1 1 foo 2 2 1 215s 2 2 1 foo 4 2 2 215s 3 4 1 foo 6 2 3 215s 4 1 2 foo 2 3 4 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 1 1 6 4 215s > 215s > # rectilinear with midpoints given: 215s > xd = c(1, 2, 4) 215s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE) 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values x/y 215s x 1 3 NA NA FALSE [0.5,1.5), [1.5,3.0), [3.0,5.0) [x] 215s y 1 3 0.5 1 FALSE NULL [y] 215s band 1 2 NA NA FALSE foo, bar 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s x y band X 215s 1 1.00 1 foo 1 215s 2 2.25 1 foo 2 215s 3 4.00 1 foo 3 215s 4 1.00 2 foo 4 215s > as.data.frame(st, add_max=TRUE)[1:4,] 215s x y band x_max y_max X 215s 1 0.5 0.5 foo 1.5 1.5 1 215s 2 1.5 0.5 foo 3.0 1.5 2 215s 3 3.0 0.5 foo 5.0 1.5 3 215s 4 0.5 1.5 foo 1.5 2.5 4 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 0.5 0.5 5.0 3.5 215s > 215s > # rectilinear with midpoints given, point support 215s > xd = c(1, 2, 4) 215s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE, point = TRUE) 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values x/y 215s x 1 3 NA NA TRUE 1, 2, 4 [x] 215s y 1 3 0.5 1 TRUE NULL [y] 215s band 1 2 NA NA TRUE foo, bar 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s x y band X 215s 1 1 1 foo 1 215s 2 2 1 foo 2 215s 3 4 1 foo 3 215s 4 1 2 foo 4 215s > as.data.frame(st, add_max=TRUE)[1:4,] 215s x y band x_max y_max X 215s 1 1 0.5 foo 1 1.5 1 215s 2 2 0.5 foo 2 1.5 2 215s 3 4 0.5 foo 4 1.5 3 215s 4 1 1.5 foo 1 2.5 4 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 1.0 0.5 4.0 3.5 215s > 215s > # rectilinear with start/end given: 215s > #xd = stars:::make_intervals(start = c(1,2,4), end = c(2, 4, 8)) 215s > xd = c(1, 2, 4, 8) # one more than dim of the data array 215s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values x/y 215s x 1 3 NA NA FALSE [1,2), [2,4), [4,8) [x] 215s y 1 3 1 1 FALSE NULL [y] 215s band 1 2 NA NA FALSE foo, bar 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s x y band X 215s 1 1.5 1.5 foo 1 215s 2 3.0 1.5 foo 2 215s 3 6.0 1.5 foo 3 215s 4 1.5 2.5 foo 4 215s > as.data.frame(st, add_max=TRUE)[1:4,] 215s x y band x_max y_max X 215s 1 1 1 foo 2 2 1 215s 2 2 1 foo 4 2 2 215s 3 4 1 foo 8 2 3 215s 4 1 2 foo 2 3 4 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 1 1 8 4 215s > 215s > # with sfc: 215s > sfc = st_sfc(st_point(0:1), st_point(2:1), st_point(4:3)) 215s > d = st_dimensions(x = sfc, y = 1:3, band = c("foo", "bar")) 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values 215s x 1 3 NA NA TRUE POINT (0 1),...,POINT (4 3) 215s y 1 3 1 1 FALSE NULL 215s band 1 2 NA NA FALSE foo, bar 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s x y band X 215s 1 POINT (0 1) 1 foo 1 215s 2 POINT (2 1) 1 foo 2 215s 3 POINT (4 3) 1 foo 3 215s 4 POINT (0 1) 2 foo 4 215s > st_as_sf(st, long = TRUE)[1:4,] 215s Simple feature collection with 4 features and 3 fields 215s Geometry type: POINT 215s Dimension: XY 215s Bounding box: xmin: 0 ymin: 1 xmax: 4 ymax: 3 215s CRS: NA 215s y band X x 215s 1 1 foo 1 POINT (0 1) 215s 2 1 foo 2 POINT (2 1) 215s 3 1 foo 3 POINT (4 3) 215s 4 2 foo 4 POINT (0 1) 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 0 1 4 3 215s > 215s > # rotated/sheared: 215s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), affine = c(0.2, -0.2)) 215s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 215s stars object with 3 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 5.25 9.5 9.5 13.75 18 215s dimension(s): 215s from to offset delta point values x/y 215s x 1 3 1 1 FALSE NULL [x] 215s y 1 3 1 1 FALSE NULL [y] 215s band 1 2 NA NA FALSE foo, bar 215s sheared raster with parameters: 0.2 -0.2 215s > as.data.frame(st, add_max=FALSE)[1:4,] 215s x y X 215s 1 1.6 1.4 1 215s 2 2.6 1.2 2 215s 3 3.6 1.0 3 215s 4 1.8 2.4 4 215s > try(as.data.frame(st, add_max=TRUE)[1:4,]) # errors 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 1.0 0.4 4.6 4.0 215s > 215s > # curvilinear: 215s > set.seed(13531) 215s > lon = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 215s > lat = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 215s > ll = setNames(c(lon, lat), c("lon", "lat")) 215s > d = st_dimensions(lon = 1:3, lat = 1:3) 215s > a = st_as_stars(list(X = array(1:9, c(3,3))), dimensions = d) 215s > (st = st_as_stars(a, curvilinear = ll)) 215s stars object with 2 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s X 1 3 5 5 7 9 215s dimension(s): 215s from to refsys point values x/y 215s lon 1 3 WGS 84 (CRS84) FALSE [3x3] 0.03,...,0.89 [x] 215s lat 1 3 WGS 84 (CRS84) FALSE [3x3] 0.021,...,0.89 [y] 215s curvilinear grid 215s > as.data.frame(st) 215s lon lat X 215s 1 0.89 0.250 1 215s 2 0.64 0.510 2 215s 3 0.30 0.670 3 215s 4 0.69 0.890 4 215s 5 0.47 0.890 5 215s 6 0.26 0.190 6 215s 7 0.57 0.021 7 215s 8 0.27 0.220 8 215s 9 0.03 0.340 9 215s > st_bbox(st) 215s xmin ymin xmax ymax 215s 0.030 0.021 0.890 0.890 215s > 215s > # time regular: 215s > t = as.Date("2019-01-20") + 0:3 215s > d = st_dimensions(t, sfc) 215s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 215s stars object with 2 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s a 1 3.75 6.5 6.5 9.25 12 215s dimension(s): 215s from to offset delta refsys point values 215s X1 1 4 2019-01-20 1 days Date FALSE NULL 215s X2 1 3 NA NA NA TRUE POINT (0 1),...,POINT (4 3) 215s > as.data.frame(st) 215s X1 X2 a 215s 1 2019-01-20 POINT (0 1) 1 215s 2 2019-01-21 POINT (0 1) 2 215s 3 2019-01-22 POINT (0 1) 3 215s 4 2019-01-23 POINT (0 1) 4 215s 5 2019-01-20 POINT (2 1) 5 215s 6 2019-01-21 POINT (2 1) 6 215s 7 2019-01-22 POINT (2 1) 7 215s 8 2019-01-23 POINT (2 1) 8 215s 9 2019-01-20 POINT (4 3) 9 215s 10 2019-01-21 POINT (4 3) 10 215s 11 2019-01-22 POINT (4 3) 11 215s 12 2019-01-23 POINT (4 3) 12 215s > 215s > # time, rectilinear 215s > t = as.Date("2019-01-20") + c(0, 2, 3, 10) 215s > d = st_dimensions(t, sfc) 215s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 215s stars object with 2 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s a 1 3.75 6.5 6.5 9.25 12 215s dimension(s): 215s from to refsys point values 215s X1 1 4 Date FALSE 2019-01-20,...,2019-01-30 215s X2 1 3 NA TRUE POINT (0 1),...,POINT (4 3) 215s > as.data.frame(st) 215s X1 X2 a 215s 1 2019-01-20 POINT (0 1) 1 215s 2 2019-01-22 POINT (0 1) 2 215s 3 2019-01-23 POINT (0 1) 3 215s 4 2019-01-30 POINT (0 1) 4 215s 5 2019-01-20 POINT (2 1) 5 215s 6 2019-01-22 POINT (2 1) 6 215s 7 2019-01-23 POINT (2 1) 7 215s 8 2019-01-30 POINT (2 1) 8 215s 9 2019-01-20 POINT (4 3) 9 215s 10 2019-01-22 POINT (4 3) 10 215s 11 2019-01-23 POINT (4 3) 11 215s 12 2019-01-30 POINT (4 3) 12 215s > 215s BEGIN TEST mdim.R 215s 215s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 215s Copyright (C) 2025 The R Foundation for Statistical Computing 215s Platform: aarch64-unknown-linux-gnu 215s 215s R is free software and comes with ABSOLUTELY NO WARRANTY. 215s You are welcome to redistribute it under certain conditions. 215s Type 'license()' or 'licence()' for distribution details. 215s 215s R is a collaborative project with many contributors. 215s Type 'contributors()' for more information and 215s 'citation()' on how to cite R or R packages in publications. 215s 215s Type 'demo()' for some demos, 'help()' for on-line help, or 215s 'help.start()' for an HTML browser interface to help. 215s Type 'q()' to quit R. 215s 215s > Sys.setenv(TZ="") 215s > suppressPackageStartupMessages(library(stars)) 215s > matrix(1:4,2) 215s [,1] [,2] 215s [1,] 1 3 215s [2,] 2 4 215s > m = matrix(1:4,2) 215s > s = st_as_stars(m) 215s > 215s > s = st_set_dimensions(s, st_dimensions(s), xy = NULL) 215s > sfc = st_sfc(st_point(0:1), st_point(3:2)) 215s > s = st_set_dimensions(s, 1, sfc) |> st_set_crs(4326) 215s > tm = as.POSIXct("2023-03-04 12:35") + c(0, 3600) 215s > s = st_set_dimensions(s, 2, tm) 215s > f = tempfile(fileext = ".nc") 215s > write_mdim(s, f, as_float = FALSE) 215s > s2 = read_mdim(f) 215s > #print(s2) 215s > print(all.equal(s, s2, check.attributes = FALSE)) 215s Warning messages: 215s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 215s GDAL Error 6: SetIndexingVariable() not implemented 215s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 215s GDAL Error 6: SetIndexingVariable() not implemented 215s [1] TRUE 215s > print(all.equal(s, s2)) 215s [1] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"input\": 1 string mismatch >" 215s [2] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"wkt\": 1 string mismatch >" 215s [3] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"input\": 1 string mismatch > >" 215s [4] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"wkt\": 1 string mismatch > >" 215s [5] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"offset\": 'tzone' attributes are inconsistent ('' and 'UTC') >" 215s [6] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 215s > 215s > st_crs(sfc) = st_crs(s2) 215s > st_crs(s) = st_crs(s2) 215s > tm = as.Date("2023-02-25") + 0:1 215s > sd = st_set_dimensions(s, 2, tm) 215s > print(sd) 215s stars object with 2 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s A1 1 1.75 2.5 2.5 3.25 4 215s dimension(s): 215s from to offset delta refsys point values 215s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 215s X2 1 2 2023-02-25 1 days Date FALSE NULL 215s > sd = st_set_dimensions(sd, 1, sfc) 215s > print(sd) 215s stars object with 2 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s A1 1 1.75 2.5 2.5 3.25 4 215s dimension(s): 215s from to offset delta refsys point values 215s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 215s X2 1 2 2023-02-25 1 days Date FALSE NULL 215s > f = tempfile(fileext = ".nc") 215s > write_mdim(sd, f) 215s > sd2 = read_mdim(f) 215s Warning messages: 215s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 215s GDAL Error 6: SetIndexingVariable() not implemented 215s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 215s GDAL Error 6: SetIndexingVariable() not implemented 215s > print(sd2) 215s stars object with 2 dimensions and 1 attribute 215s attribute(s): 215s Min. 1st Qu. Median Mean 3rd Qu. Max. 215s A1 1 1.75 2.5 2.5 3.25 4 215s dimension(s): 215s from to offset delta refsys point values 215s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 215s X2 1 2 2023-02-25 1 days Date NA NULL 215s > print(all.equal(sd, sd2, check.attributes = FALSE)) 215s [1] TRUE 215s > print(all.equal(sd, sd2)) 215s [1] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 215s > # if (.Platform$OS.type == "unix") { 215s > # print(read_mdim(paste0("/vsizip/", (system.file("zarr/sic_daily_sample.zarr.zip", package = "stars")))) 215s > # } 215s > 215s BEGIN TEST nc.R 215s 215s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 215s Copyright (C) 2025 The R Foundation for Statistical Computing 215s Platform: aarch64-unknown-linux-gnu 215s 215s R is free software and comes with ABSOLUTELY NO WARRANTY. 215s You are welcome to redistribute it under certain conditions. 215s Type 'license()' or 'licence()' for distribution details. 215s 215s R is a collaborative project with many contributors. 215s Type 'contributors()' for more information and 215s 'citation()' on how to cite R or R packages in publications. 215s 215s Type 'demo()' for some demos, 'help()' for on-line help, or 215s 'help.start()' for an HTML browser interface to help. 215s Type 'q()' to quit R. 215s 216s > # examples with the sf::nc polygon dataset NOT ABOUT NETCDF's, see e.g. stars.R netcdf.R 216s > suppressPackageStartupMessages(library(sf)) 216s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 216s > m = st_set_geometry(nc, NULL) 216s > n = as.matrix(m[c("BIR74", "SID74", "NWBIR74", "BIR79", "SID79", "NWBIR79")]) 216s > dim(n) = c(county = 100, var = 3, year = 2) 216s > dimnames(n) = list(county = nc$NAME, var = c("BIR", "SID", "NWBIR"), year = c(1974, 1979)) 216s > suppressPackageStartupMessages(library(stars)) 216s > (st = st_as_stars(pop = n)) 216s stars object with 3 dimensions and 1 attribute 216s attribute(s): 216s Min. 1st Qu. Median Mean 3rd Qu. Max. 216s pop 0 8 538 1657.032 1784 30757 216s dimension(s): 216s from to values 216s county 1 100 Ashe,...,Brunswick 216s var 1 3 BIR , SID , NWBIR 216s year 1 2 1974, 1979 216s > foo <- st %>% st_set_dimensions(1, st_geometry(nc)) # %>% st_set_dimensions(3, c(1974, 1979)) 216s > st %>% st_set_dimensions(1, st_geometry(nc)) %>% st_set_dimensions(names = c("geometries", "var", "year")) 216s stars object with 3 dimensions and 1 attribute 216s attribute(s): 216s Min. 1st Qu. Median Mean 3rd Qu. Max. 216s pop 0 8 538 1657.032 1784 30757 216s dimension(s): 216s from to refsys point 216s geometries 1 100 NAD27 FALSE 216s var 1 3 NA NA 216s year 1 2 NA NA 216s values 216s geometries MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 216s var BIR , SID , NWBIR 216s year 1974, 1979 216s > foo 216s stars object with 3 dimensions and 1 attribute 216s attribute(s): 216s Min. 1st Qu. Median Mean 3rd Qu. Max. 216s pop 0 8 538 1657.032 1784 30757 216s dimension(s): 216s from to refsys point 216s county 1 100 NAD27 FALSE 216s var 1 3 NA NA 216s year 1 2 NA NA 216s values 216s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 216s var BIR , SID , NWBIR 216s year 1974, 1979 216s > st_bbox(foo) 216s xmin ymin xmax ymax 216s -84.32385 33.88199 -75.45698 36.58965 216s > (x = st_as_sf(foo)) 216s Simple feature collection with 100 features and 6 fields 216s Geometry type: MULTIPOLYGON 216s Dimension: XY 216s Bounding box: xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965 216s Geodetic CRS: NAD27 216s First 10 features: 216s BIR.1974 SID.1974 NWBIR.1974 BIR.1979 SID.1979 NWBIR.1979 216s 1 1091 1 10 1364 0 19 216s 2 487 0 10 542 3 12 216s 3 3188 5 208 3616 6 260 216s 4 508 1 123 830 2 145 216s 5 1421 9 1066 1606 3 1197 216s 6 1452 7 954 1838 5 1237 216s 7 286 0 115 350 2 139 216s 8 420 0 254 594 2 371 216s 9 968 4 748 1190 2 844 216s 10 1612 1 160 2038 5 176 216s county 216s 1 MULTIPOLYGON (((-81.47276 3... 216s 2 MULTIPOLYGON (((-81.23989 3... 216s 3 MULTIPOLYGON (((-80.45634 3... 216s 4 MULTIPOLYGON (((-76.00897 3... 216s 5 MULTIPOLYGON (((-77.21767 3... 216s 6 MULTIPOLYGON (((-76.74506 3... 216s 7 MULTIPOLYGON (((-76.00897 3... 216s 8 MULTIPOLYGON (((-76.56251 3... 216s 9 MULTIPOLYGON (((-78.30876 3... 216s 10 MULTIPOLYGON (((-80.02567 3... 216s > frac = function(x) x[2] / x[1] 216s > frac2 = function(x) c(sidsr = x[2] / x[1], nwbr = x[3] / x[1]) 216s > frac2an = function(x) c(x[2] / x[1], x[3] / x[1]) 216s > st_apply(foo, c(1,3), frac) 216s stars object with 2 dimensions and 1 attribute 216s attribute(s): 216s Min. 1st Qu. Median Mean 3rd Qu. Max. 216s frac 0 0.001197874 0.001930504 0.002042241 0.002599348 0.00955414 216s dimension(s): 216s from to refsys point 216s county 1 100 NAD27 FALSE 216s year 1 2 NA NA 216s values 216s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 216s year 1974, 1979 216s > st_apply(foo, c(1,3), frac2) 216s stars object with 3 dimensions and 1 attribute 216s attribute(s): 216s Min. 1st Qu. Median Mean 3rd Qu. Max. 216s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 216s dimension(s): 216s from to refsys point 216s frac2 1 2 NA NA 216s county 1 100 NAD27 FALSE 216s year 1 2 NA NA 216s values 216s frac2 sidsr, nwbr 216s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 216s year 1974, 1979 216s > st_apply(foo, c(1,3), frac2an) 216s stars object with 3 dimensions and 1 attribute 216s attribute(s): 216s Min. 1st Qu. Median Mean 3rd Qu. Max. 216s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 216s dimension(s): 216s from to refsys point 216s frac2an 1 2 NA NA 216s county 1 100 NAD27 FALSE 216s year 1 2 NA NA 216s values 216s frac2an NULL 216s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 216s year 1974, 1979 216s > library(abind) 216s > (x = aperm(st_apply(foo, c(1,3), frac2), c(2,3,1))) 216s stars object with 3 dimensions and 1 attribute 216s attribute(s): 216s Min. 1st Qu. Median Mean 3rd Qu. Max. 216s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 216s dimension(s): 216s from to refsys point 216s county 1 100 NAD27 FALSE 216s year 1 2 NA NA 216s frac2 1 2 NA NA 216s values 216s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 216s year 1974, 1979 216s frac2 sidsr, nwbr 216s > y = aperm(st_apply(foo, c(1,3), frac2), c("county","year","frac2")) 216s > all.equal(st_dimensions(x), st_dimensions(y)) 217s [1] TRUE 217s > 217s > split(foo, 2) 217s stars object with 2 dimensions and 3 attributes 217s attribute(s): 217s Min. 1st Qu. Median Mean 3rd Qu. Max. 217s BIR 248 1176.75 2265 3761.770 4450.75 30757 217s SID 0 2.00 5 7.515 9.00 57 217s NWBIR 1 206.00 742 1201.810 1315.75 11631 217s dimension(s): 217s from to refsys point 217s county 1 100 NAD27 FALSE 217s year 1 2 NA NA 217s values 217s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 217s year 1974, 1979 217s > split(foo, 3) 217s stars object with 2 dimensions and 2 attributes 217s attribute(s): 217s Min. 1st Qu. Median Mean 3rd Qu. Max. 217s 1974 0 8 501.5 1452.367 1580.50 21588 217s 1979 0 9 614.0 1861.697 2040.25 30757 217s dimension(s): 217s from to refsys point 217s county 1 100 NAD27 FALSE 217s var 1 3 NA NA 217s values 217s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 217s var BIR , SID , NWBIR 217s > 217s > st_crs(foo) 217s Coordinate Reference System: 217s User input: NAD27 217s wkt: 217s GEOGCRS["NAD27", 217s DATUM["North American Datum 1927", 217s ELLIPSOID["Clarke 1866",6378206.4,294.978698213898, 217s LENGTHUNIT["metre",1]]], 217s PRIMEM["Greenwich",0, 217s ANGLEUNIT["degree",0.0174532925199433]], 217s CS[ellipsoidal,2], 217s AXIS["geodetic latitude (Lat)",north, 217s ORDER[1], 217s ANGLEUNIT["degree",0.0174532925199433]], 217s AXIS["geodetic longitude (Lon)",east, 217s ORDER[2], 217s ANGLEUNIT["degree",0.0174532925199433]], 217s USAGE[ 217s SCOPE["Geodesy."], 217s AREA["North and central America: Antigua and Barbuda - onshore. Bahamas - onshore plus offshore over internal continental shelf only. Belize - onshore. British Virgin Islands - onshore. Canada onshore - Alberta, British Columbia, Manitoba, New Brunswick, Newfoundland and Labrador, Northwest Territories, Nova Scotia, Nunavut, Ontario, Prince Edward Island, Quebec, Saskatchewan and Yukon - plus offshore east coast. Cuba - onshore and offshore. El Salvador - onshore. Guatemala - onshore. Honduras - onshore. Panama - onshore. Puerto Rico - onshore. Mexico - onshore plus offshore east coast. Nicaragua - onshore. United States (USA) onshore and offshore - Alabama, Alaska, Arizona, Arkansas, California, Colorado, Connecticut, Delaware, Florida, Georgia, Idaho, Illinois, Indiana, Iowa, Kansas, Kentucky, Louisiana, Maine, Maryland, Massachusetts, Michigan, Minnesota, Mississippi, Missouri, Montana, Nebraska, Nevada, New Hampshire, New Jersey, New Mexico, New York, North Carolina, North Dakota, Ohio, Oklahoma, Oregon, Pennsylvania, Rhode Island, South Carolina, South Dakota, Tennessee, Texas, Utah, Vermont, Virginia, Washington, West Virginia, Wisconsin and Wyoming - plus offshore . US Virgin Islands - onshore."], 217s BBOX[7.15,167.65,83.17,-47.74]], 217s ID["EPSG",4267]] 217s > plot(foo) 217s > 217s > # subset vector cube: 217s > foo[nc[1]] 217s stars object with 3 dimensions and 1 attribute 217s attribute(s): 217s Min. 1st Qu. Median Mean 3rd Qu. Max. 217s pop 0 8 538 1657.032 1784 30757 217s dimension(s): 217s from to refsys point 217s county 1 100 NAD27 FALSE 217s var 1 3 NA NA 217s year 1 2 NA NA 217s values 217s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 217s var BIR , SID , NWBIR 217s year 1974, 1979 217s > 217s BEGIN TEST plot.R 217s 217s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 217s Copyright (C) 2025 The R Foundation for Statistical Computing 217s Platform: aarch64-unknown-linux-gnu 217s 217s R is free software and comes with ABSOLUTELY NO WARRANTY. 217s You are welcome to redistribute it under certain conditions. 217s Type 'license()' or 'licence()' for distribution details. 217s 217s R is a collaborative project with many contributors. 217s Type 'contributors()' for more information and 217s 'citation()' on how to cite R or R packages in publications. 217s 217s Type 'demo()' for some demos, 'help()' for on-line help, or 217s 'help.start()' for an HTML browser interface to help. 217s Type 'q()' to quit R. 217s 217s > suppressPackageStartupMessages(library(stars)) 218s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 218s + data(air) # this loads several datasets in .GlobalEnv 218s + dim(air) 218s + d = st_dimensions(station = st_as_sfc(stations), time = dates) 218s + aq = st_as_stars(list(PM10 = air), dimensions = d) 218s + image(aperm(log(aq), 2:1), main = "NA pattern (white) in PM10 station time series") 218s + st_geometry(aq) 218s + } 218s Geometry set for 70 features 218s Geometry type: POINT 218s Dimension: XY 218s Bounding box: xmin: 6.28107 ymin: 47.80847 xmax: 14.78617 ymax: 54.92497 218s Geodetic CRS: +proj=longlat +datum=WGS84 +no_defs 218s First 5 geometries: 218s POINT (9.585911 53.67057) 219s POINT (9.68503 53.52418) 219s POINT (9.791584 54.07312) 219s POINT (13.64701 52.44775) 219s POINT (13.29635 52.65315) 219s > 219s > csv = system.file("tif/ESACCI-LC-Legend.csv", package = "starsdata") 219s > if (csv != "") { 219s + rgb = read.csv(csv, header = TRUE, sep = ";") 219s + luc = read_stars(system.file("tif/LUC3.tif", package = "starsdata")) 219s + plot(luc, rgb = rgb, axes = TRUE, key.pos = NULL) 219s + } 219s > 219s > # https://github.com/r-spatial/stars/issues/233 : 219s > nc = read_sf(system.file("shape/nc.shp", package = "sf")) 219s > output = st_as_stars(st_bbox(nc), nx = 1, ny = 1, values = 1) 219s > plot(output) 219s Warning message: 219s In plot.stars(output) : 219s breaks="quantile" leads to a single class; maybe try breaks="equal" instead? 219s > 219s BEGIN TEST predict.R 219s 219s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 219s Copyright (C) 2025 The R Foundation for Statistical Computing 219s Platform: aarch64-unknown-linux-gnu 219s 219s R is free software and comes with ABSOLUTELY NO WARRANTY. 219s You are welcome to redistribute it under certain conditions. 219s Type 'license()' or 'licence()' for distribution details. 219s 219s R is a collaborative project with many contributors. 219s Type 'contributors()' for more information and 219s 'citation()' on how to cite R or R packages in publications. 219s 219s Type 'demo()' for some demos, 'help()' for on-line help, or 219s 'help.start()' for an HTML browser interface to help. 219s Type 'q()' to quit R. 219s 219s > suppressPackageStartupMessages(library(stars)) 220s > # predict: 220s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 220s > (x = read_stars(tif)) 220s stars object with 3 dimensions and 1 attribute 220s attribute(s): 220s Min. 1st Qu. Median Mean 3rd Qu. Max. 220s L7_ETMs.tif 1 54 69 68.91242 86 255 220s dimension(s): 220s from to offset delta refsys point x/y 220s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 220s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 220s band 1 6 NA NA NA NA 220s > st_crs(x) = st_crs(x) # cleans trailing space 220s > model = lm(x~L7_ETMs.tif, head(as.data.frame(x), 50)) 220s > x = predict(x, model) 221s > 221s > (y = read_stars(tif, proxy = TRUE)) 221s stars_proxy object with 1 attribute in 1 file(s): 221s $L7_ETMs.tif 221s [1] "[...]/L7_ETMs.tif" 221s 221s dimension(s): 221s from to offset delta refsys point x/y 221s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 221s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 221s band 1 6 NA NA NA NA 221s > (yp = predict(y, model)) 221s stars_proxy object with 1 attribute in 1 file(s): 221s $L7_ETMs.tif 221s [1] "[...]/L7_ETMs.tif" 221s 221s dimension(s): 221s from to offset delta refsys point x/y 221s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 221s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 221s band 1 6 NA NA NA NA 221s call_list: 221s [[1]] 221s predict(object = object, model = model) 221s attr(,".Environment") 221s 221s 221s This object has pending lazy operations: dimensions as printed may not reflect this. 221s > all.equal(x, st_as_stars(yp)) 222s [1] TRUE 222s > 222s > yy = st_set_dimensions(y, 3, values = paste0("band", 1:6)) 222s > (y_spl = split(yy, 3)) 222s stars_proxy object with 1 attribute in 1 file(s): 222s $L7_ETMs.tif 222s [1] "[...]/L7_ETMs.tif" 222s 222s dimension(s): 222s from to offset delta refsys point values 222s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 222s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 222s band 1 6 NA NA NA NA band1,...,band6 222s x/y 222s x [x] 222s y [y] 222s band 222s call_list: 222s [[1]] 222s split(x = x, 3) 222s attr(,".Environment") 222s 222s 222s This object has pending lazy operations: dimensions as printed may not reflect this. 222s > as.data.frame(st_as_stars(split(yy, 3)))[1:3,] 222s x y band1 band2 band3 band4 band5 band6 222s 1 288790.5 9120747 69 56 46 79 86 46 222s 2 288819.0 9120747 69 57 49 75 88 49 222s 3 288847.5 9120747 63 52 45 66 75 41 222s > 222s BEGIN TEST proxy.R 222s 222s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 222s Copyright (C) 2025 The R Foundation for Statistical Computing 222s Platform: aarch64-unknown-linux-gnu 222s 222s R is free software and comes with ABSOLUTELY NO WARRANTY. 222s You are welcome to redistribute it under certain conditions. 222s Type 'license()' or 'licence()' for distribution details. 222s 222s R is a collaborative project with many contributors. 222s Type 'contributors()' for more information and 222s 'citation()' on how to cite R or R packages in publications. 222s 222s Type 'demo()' for some demos, 'help()' for on-line help, or 222s 'help.start()' for an HTML browser interface to help. 222s Type 'q()' to quit R. 222s 222s > Sys.setenv(TZ="UTC") 222s > suppressPackageStartupMessages(library(sf)) 223s > suppressPackageStartupMessages(library(stars)) 223s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 223s > (r = read_stars(tif, proxy = TRUE)) 223s stars_proxy object with 1 attribute in 1 file(s): 223s $L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" 223s 223s dimension(s): 223s from to offset delta refsys point x/y 223s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 223s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 223s band 1 6 NA NA NA NA 223s > if (interactive()) { 223s + plot(r) 223s + } 223s > dim(r) 223s x y band 223s 349 352 6 223s > r[,,,2:3] 223s stars_proxy object with 1 attribute in 1 file(s): 223s $L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" 223s 223s dimension(s): 223s from to offset delta refsys point x/y 223s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 223s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 223s band 2 3 NA NA NA NA 223s > r+r 223s stars_proxy object with 1 attribute in 1 file(s): 223s $L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" 223s 223s dimension(s): 223s from to offset delta refsys point x/y 223s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 223s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 223s band 1 6 NA NA NA NA 223s call_list: 223s [[1]] 223s e1 + e2 223s attr(,".Environment") 223s 223s 223s This object has pending lazy operations: dimensions as printed may not reflect this. 223s > st_as_stars(sin(r), downsample = 2) 223s stars object with 3 dimensions and 1 attribute 223s attribute(s): 223s Min. 1st Qu. Median Mean 3rd Qu. Max. 223s L7_ETMs.tif -0.9999902 -0.676772 0.0353983 0.01655317 0.7210377 0.9999119 223s dimension(s): 223s from to offset delta refsys point x/y 223s x 1 117 288776 85.01 SIRGAS 2000 / UTM zone 25S FALSE [x] 223s y 1 118 9120761 -85.02 SIRGAS 2000 / UTM zone 25S FALSE [y] 223s band 1 6 NA NA NA NA 223s > aperm(r, c(3,2,1)) 223s stars_proxy object with 1 attribute in 1 file(s): 223s $L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" 223s 223s dimension(s): 223s from to offset delta refsys point x/y 223s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 223s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 223s band 1 6 NA NA NA NA 223s call_list: 223s [[1]] 223s aperm(a = a, perm = perm) 223s attr(,".Environment") 223s 223s 223s This object has pending lazy operations: dimensions as printed may not reflect this. 223s > if (interactive()) { 223s + plot(r) 223s + } 223s > (xx = c(r,r)) 223s stars_proxy object with 2 attributes in 2 file(s): 223s $L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" 223s 223s $L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" 223s 223s dimension(s): 223s from to offset delta refsys point x/y 223s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 223s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 223s band 1 6 NA NA NA NA 223s > st_redimension(xx) 223s stars_proxy object with 1 attribute in 2 file(s): 223s $L7_ETMs.tif.L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 223s 223s dimension(s): 223s from to offset delta refsys point 223s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 223s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 223s band 1 6 NA NA NA NA 223s new_dim 1 2 NA NA NA NA 223s values x/y 223s x NULL [x] 223s y NULL [y] 223s band NULL 223s new_dim L7_ETMs.tif, L7_ETMs.tif 223s > st_as_stars(r) 223s stars object with 3 dimensions and 1 attribute 223s attribute(s): 223s Min. 1st Qu. Median Mean 3rd Qu. Max. 223s L7_ETMs.tif 1 54 69 68.91242 86 255 223s dimension(s): 223s from to offset delta refsys point x/y 223s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 223s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 223s band 1 6 NA NA NA NA 223s > (y = st_apply(r, 1:2, max)) 223s stars_proxy object with 1 attribute in 1 file(s): 223s $L7_ETMs.tif 223s [1] "[...]/L7_ETMs.tif" 223s 223s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s band 1 6 NA NA NA NA 224s call_list: 224s [[1]] 224s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 224s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 224s attr(,".Environment") 224s 224s 224s This object has pending lazy operations: dimensions as printed may not reflect this. 224s > (yy = st_as_stars(y, downsample = 1)) 224s stars object with 2 dimensions and 1 attribute 224s attribute(s): 224s Min. 1st Qu. Median Mean 3rd Qu. Max. 224s max 55 85 96 99.38568 113 255 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s > (y = adrop(st_apply(r, c("x", "y"), max))) 224s stars_proxy object with 1 attribute in 1 file(s): 224s $L7_ETMs.tif 224s [1] "[...]/L7_ETMs.tif" 224s 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s band 1 6 NA NA NA NA 224s call_list: 224s [[1]] 224s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 224s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 224s attr(,".Environment") 224s 224s 224s [[2]] 224s adrop(x = x, drop = drop) 224s attr(,".Environment") 224s 224s 224s This object has pending lazy operations: dimensions as printed may not reflect this. 224s > (yy = st_as_stars(y, downsample = 1)) 224s stars object with 2 dimensions and 1 attribute 224s attribute(s): 224s Min. 1st Qu. Median Mean 3rd Qu. Max. 224s max 55 85 96 99.38568 113 255 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s > plot(yy) 224s > (y = adrop(st_apply(r, c("x", "band"), max))) 224s stars_proxy object with 1 attribute in 1 file(s): 224s $L7_ETMs.tif 224s [1] "[...]/L7_ETMs.tif" 224s 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s band 1 6 NA NA NA NA 224s call_list: 224s [[1]] 224s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 224s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 224s attr(,".Environment") 224s 224s 224s [[2]] 224s adrop(x = x, drop = drop) 224s attr(,".Environment") 224s 224s 224s This object has pending lazy operations: dimensions as printed may not reflect this. 224s > (yy = st_as_stars(y, downsample = 1)) 224s stars object with 2 dimensions and 1 attribute 224s attribute(s): 224s Min. 1st Qu. Median Mean 3rd Qu. Max. 224s max 77 111 133 137.8505 157 255 224s dimension(s): 224s from to offset delta refsys point 224s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE 224s band 1 6 NA NA NA NA 224s > rm(yy) 224s > 224s > (xx = c(r,r)) 224s Warning message: 224s In FUN(X[[i]], ...) : 224s st_apply on x/y dimensions applied to downsampled image(s) 224s stars_proxy object with 2 attributes in 2 file(s): 224s $L7_ETMs.tif 224s [1] "[...]/L7_ETMs.tif" 224s 224s $L7_ETMs.tif 224s [1] "[...]/L7_ETMs.tif" 224s 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s band 1 6 NA NA NA NA 224s > names(xx) = c("a", "b") 224s > xx["a"] 224s stars_proxy object with 1 attribute in 1 file(s): 224s $a 224s [1] "[...]/L7_ETMs.tif" 224s 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s band 1 6 NA NA NA NA 224s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 224s > buf = st_buffer(st_sfc(pt, crs = st_crs(r)), 1500) 224s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 224s + crs = st_crs(r)) 224s > r = r[buf] # crops 224s > r = r[buf, epsilon = 1e-5] # crops with shrinked bounding box 224s > 224s > # c: 224s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 224s > if (FALSE && f != "") { 224s + files = c("avhrr-only-v2.19810901.nc", 224s + "avhrr-only-v2.19810902.nc", 224s + "avhrr-only-v2.19810903.nc", 224s + "avhrr-only-v2.19810904.nc", 224s + "avhrr-only-v2.19810905.nc", 224s + "avhrr-only-v2.19810906.nc", 224s + "avhrr-only-v2.19810907.nc", 224s + "avhrr-only-v2.19810908.nc", 224s + "avhrr-only-v2.19810909.nc") 224s + l = list() 224s + for (f in files) { 224s + from = system.file(paste0("netcdf/", f), package = "starsdata") 224s + l[[f]] = read_stars(from, sub = c("sst", "anom"), proxy = TRUE) 224s + } 224s + ret = do.call(c, l) 224s + print(ret) 224s + all = system.file(paste0("netcdf/", files), package = "starsdata") 224s + ret = read_stars(all, sub = c("sst", "anom")) 224s + print(ret) 224s + print(st_redimension(ret)) # collapse the two attributes into new dimension 224s + 224s + try(ret <- c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 224s + #print(ret) 224s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 224s + #print(ret) 224s + ret <- st_redimension(l[[1]], along = list(times = as.Date("1981-09-01") + 0:1)) 224s + print(ret) 224s + } 224s > 224s > # demonstrate that environments work: 224s > x = read_stars(tif, proxy = TRUE) 224s > f = function(x) { 224s + g = function(xx) { 224s + ndvi = function(z1, z2, z3, z4, z5, z6) (z2-z1)/(z2+z1) 224s + st_apply(xx, 1:2, ndvi) 224s + } 224s + g(x) 224s + } 224s > (x = f(x)) 224s stars_proxy object with 1 attribute in 1 file(s): 224s $L7_ETMs.tif 224s [1] "[...]/L7_ETMs.tif" 224s 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s band 1 6 NA NA NA NA 224s call_list: 224s [[1]] 224s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 224s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 224s attr(,".Environment") 224s 224s 224s This object has pending lazy operations: dimensions as printed may not reflect this. 224s > st_as_stars(x) 224s stars object with 2 dimensions and 1 attribute 224s attribute(s): 224s Min. 1st Qu. Median Mean 3rd Qu. Max. 224s ndvi -0.2828283 -0.1081081 -0.08287293 -0.08464615 -0.05882353 0.09259259 224s dimension(s): 224s from to offset delta refsys point x/y 224s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 224s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 224s > 224s BEGIN TEST raster.R 224s 224s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 224s Copyright (C) 2025 The R Foundation for Statistical Computing 224s Platform: aarch64-unknown-linux-gnu 224s 224s R is free software and comes with ABSOLUTELY NO WARRANTY. 224s You are welcome to redistribute it under certain conditions. 224s Type 'license()' or 'licence()' for distribution details. 224s 224s R is a collaborative project with many contributors. 224s Type 'contributors()' for more information and 224s 'citation()' on how to cite R or R packages in publications. 224s 224s Type 'demo()' for some demos, 'help()' for on-line help, or 224s 'help.start()' for an HTML browser interface to help. 224s Type 'q()' to quit R. 224s 225s > options(rgdal_show_exportToProj4_warnings = "none") 225s > suppressPackageStartupMessages(library(stars)) 225s > 225s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require("raster", quietly = TRUE) && 225s + suppressPackageStartupMessages(require("terra", quietly = TRUE))) { 225s + 225s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 225s + (x = read_stars(tif)) 225s + (r = as(x, "Raster")) 225s + (y = st_as_stars(r)) 225s + 225s + # single band: 225s + x = adrop(x[,,,1]) 225s + r = as(x, "Raster") 225s + (y = st_as_stars(r)) 225s + 225s + # proxy: 225s + (x = read_stars(tif, proxy = TRUE)) 225s + (r = as(x, "Raster")) 225s + (y = st_as_stars(r)) 225s + (y2 = st_as_stars(r, proxy = TRUE)) 225s + } 231s stars_proxy object with 1 attribute in 1 file(s): 231s $L7_ETMs.tif 231s [1] "[...]/L7_ETMs.tif" 231s 231s dimension(s): 231s from to offset delta refsys point x/y 231s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 231s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 231s band 1 6 NA NA NA NA 231s > 231s > if (require(terra, quietly = TRUE)) { 231s + ## terra ------------- 231s + stopifnot(require(terra)) 231s + (x = read_stars(tif)) 231s + (r = as(x, "SpatRaster")) 231s + (y = st_as_stars(r)) 231s + 231s + # single band: 231s + x = adrop(x[,,,1]) 231s + r = as(x, "SpatRaster") 231s + (y = st_as_stars(r)) 231s + 231s + # proxy: 231s + (x = read_stars(tif, proxy = TRUE)) 231s + (r = as(x, "SpatRaster")) 231s + (y = st_as_stars(r)) 231s + (y2 = st_as_stars(r, proxy = TRUE)) 231s + 231s + f = system.file("tif/lc.tif", package = "stars") 231s + lc = read_stars(system.file("tif/lc.tif", package = "stars")) 231s + levels(lc[[1]]) 231s + r = rast(lc) 231s + e = attr(lc[[1]], "exclude") 231s + 231s + if (packageVersion("terra") >= "1.5.48") { 231s + 231s + print(all.equal(terra::levels(r)[[1]][,2], terra::levels(rast(f))[[1]][!e,2])) 231s + print(all.equal(terra::coltab(r)[[1]][!e,], terra::coltab(rast(f))[[1]][!e,], check.attributes = FALSE)) 231s + 231s + r<- rast(nrow=10, ncol=10) 231s + set.seed(5) 231s + values(r)<- sample(1:3, size = ncell(r), replace = TRUE) 231s + levels(r) <- data.frame(ID=1:3, category = c("c1", "c2", "c3")) 231s + 231s + r2<- rast(nrow=10, ncol=10) 231s + set.seed(6) 231s + values(r2)<- sample(c(0,2,3), size = ncell(r2), replace = TRUE) 231s + levels(r2) <- data.frame(ID=c(0,2,3), category = c("x1", "x2", "x3")) 231s + 231s + r3<- c(r,r2) 231s + names(r3)<- c("lyr.1", "lyr.2") 231s + 231s + r3_stars<- st_as_stars(r3) 231s + 231s + st_redimension(r3_stars) |> print() 231s + rast(r3_stars) |> levels() |> print() 231s + 231s + m = matrix(1:121, 11, 11) 231s + bb = st_bbox(c(xmin=0, xmax=11, ymin=0, ymax=11)) 231s + s = st_as_stars(bb, values = m) 231s + r = rast(s) 231s + aggregate(r, 2) |> st_as_stars() -> r.s 231s + stopifnot(isTRUE(all.equal(r.s[,1:5,1:5], st_downsample(s, 1, FUN = mean)))) 231s + } 231s + } 231s [1] TRUE 231s [1] TRUE 232s stars object with 3 dimensions and 1 attribute 232s attribute(s): 232s lyr.1.lyr.2 232s c1:34 232s c2:32 232s c3:34 232s x1:28 232s x2:37 232s x3:35 232s dimension(s): 232s from to offset delta refsys values x/y 232s x 1 10 -180 36 WGS 84 (CRS84) NULL [x] 232s y 1 10 90 -18 WGS 84 (CRS84) NULL [y] 232s new_dim 1 2 NA NA NA lyr.1, lyr.2 232s [[1]] 232s IDs categories 232s 1 1 c1 232s 2 2 c2 232s 3 3 c3 232s 232s [[2]] 232s IDs categories 232s 1 0 x1 232s 2 2 x2 232s 3 3 x3 232s 232s > 232s > 232s BEGIN TEST rasterize.R 232s 232s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 232s Copyright (C) 2025 The R Foundation for Statistical Computing 232s Platform: aarch64-unknown-linux-gnu 232s 232s R is free software and comes with ABSOLUTELY NO WARRANTY. 232s You are welcome to redistribute it under certain conditions. 232s Type 'license()' or 'licence()' for distribution details. 232s 232s R is a collaborative project with many contributors. 232s Type 'contributors()' for more information and 232s 'citation()' on how to cite R or R packages in publications. 232s 232s Type 'demo()' for some demos, 'help()' for on-line help, or 232s 'help.start()' for an HTML browser interface to help. 232s Type 'q()' to quit R. 232s 232s > suppressPackageStartupMessages(library(stars)) 233s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 233s > (x = st_rasterize(nc)) # default grid: 233s stars object with 2 dimensions and 12 attributes 233s attribute(s): 234s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 234s AREA 0.042 0.108 0.142 1.451932e-01 0.181 0.241 30904 234s PERIMETER 0.999 1.461 1.716 1.786110e+00 2.004 3.640 30904 234s CNTY_ 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 234s CNTY_ID 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 234s FIPSNO 37001.000 37049.000 37101.000 3.710042e+04 37153.000 37199.000 30904 234s CRESS_ID 1.000 25.000 51.000 5.071206e+01 77.000 100.000 30904 234s BIR74 248.000 1323.000 2648.000 3.791637e+03 4139.000 21588.000 30904 234s SID74 0.000 3.000 5.000 7.891985e+00 10.000 44.000 30904 234s NWBIR74 1.000 297.000 844.000 1.246210e+03 1396.000 8027.000 30904 234s BIR79 319.000 1606.000 3108.000 4.852046e+03 5400.000 30757.000 30904 234s SID79 0.000 3.000 6.000 9.584098e+00 13.000 57.000 30904 234s NWBIR79 3.000 360.000 1058.000 1.604642e+03 1524.000 11631.000 30904 234s dimension(s): 234s from to offset delta refsys point x/y 234s x 1 461 -84.32 0.01925 NAD27 FALSE [x] 234s y 1 141 36.59 -0.01925 NAD27 FALSE [y] 234s > plot(x, axes = TRUE) 234s > # a bit more customized grid: 234s > (x = st_rasterize(nc, st_as_stars(st_bbox(nc), nx = 100, ny = 50, values = NA_real_))) 234s stars object with 2 dimensions and 12 attributes 234s attribute(s): 234s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 234s AREA 0.042 0.108 0.142 0.145536 0.181 0.241 2373 234s PERIMETER 0.999 1.470 1.716 1.789032 2.004 3.640 2373 234s CNTY_ 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 234s CNTY_ID 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 234s FIPSNO 37001.000 37049.000 37101.000 37100.327750 37151.000 37199.000 2373 234s CRESS_ID 1.000 25.000 51.000 50.663875 76.000 100.000 2373 234s BIR74 248.000 1323.500 2648.000 3790.530263 4139.000 21588.000 2373 234s SID74 0.000 3.000 5.000 7.905976 10.000 44.000 2373 234s NWBIR74 1.000 289.000 844.000 1246.116483 1396.000 8027.000 2373 234s BIR79 319.000 1606.000 3108.000 4848.231062 5386.000 30757.000 2373 234s SID79 0.000 3.000 6.000 9.574419 13.000 57.000 2373 234s NWBIR79 3.000 360.000 1058.000 1602.740769 1524.000 11631.000 2373 234s dimension(s): 234s from to offset delta refsys point x/y 234s x 1 100 -84.32 0.08867 NAD27 FALSE [x] 234s y 1 50 36.59 -0.05415 NAD27 FALSE [y] 234s > plot(x, axes = TRUE) 234s > (ls = st_sf(a = 1:2, st_sfc(st_linestring(rbind(c(0.1, 0), c(1.1, 1))), st_linestring(rbind(c(0, 0.05), c(1, 0.05)))))) 234s Simple feature collection with 2 features and 1 field 234s Geometry type: LINESTRING 234s Dimension: XY 234s Bounding box: xmin: 0 ymin: 0 xmax: 1.1 ymax: 1 234s CRS: NA 234s a 234s 1 1 234s 2 2 234s c..st_sfc.st_linestring.rbind.c.0.1..0...c.1.1..1.....st_linestring.rbind.c.0..........0.05...c.1..0.05...... 234s 1 LINESTRING (0.1 0, 1.1 1) 234s 2 LINESTRING (0 0.05, 1 0.05) 234s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = NA_real_)) 234s stars object with 2 dimensions and 1 attribute 234s attribute(s): 234s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 234s values NA NA NA NaN NA NA 100 234s dimension(s): 234s from to offset delta x/y 234s x 1 10 0 0.1 [x] 234s y 1 10 1 -0.1 [y] 234s > # the following two plots confirm that (only) the 234s > # upper-left corner is part of the grid cell (when dy is negative), leading 234s > # to a seemingly half-gridcell-shift problem: 234s > ## sf_extSoftVersion()["GDAL"] 234s > plot(st_rasterize(ls, grd), axes = TRUE, reset = FALSE) # ALL_TOUCHED=FALSE; 234s > plot(ls, add = TRUE, col = "red") 234s > plot(st_rasterize(ls, grd, options = "ALL_TOUCHED=TRUE"), axes = TRUE, reset = FALSE) 234s > plot(ls, add = TRUE, col = "red") 234s > # add lines to existing 0 values, summing values in case of multiple lines: 234s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = 0)) 234s stars object with 2 dimensions and 1 attribute 234s attribute(s): 234s Min. 1st Qu. Median Mean 3rd Qu. Max. 234s values 0 0 0 0 0 0 234s dimension(s): 234s from to offset delta x/y 234s x 1 10 0 0.1 [x] 234s y 1 10 1 -0.1 [y] 234s > r = st_rasterize(ls, grd, options = c("MERGE_ALG=ADD", "ALL_TOUCHED=TRUE")) 234s > plot(r, axes = TRUE, reset = FALSE) 234s > plot(ls, add = TRUE, col = "red") 234s > 234s BEGIN TEST rectilinear.R 234s 234s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 234s Copyright (C) 2025 The R Foundation for Statistical Computing 234s Platform: aarch64-unknown-linux-gnu 234s 234s R is free software and comes with ABSOLUTELY NO WARRANTY. 234s You are welcome to redistribute it under certain conditions. 234s Type 'license()' or 'licence()' for distribution details. 234s 234s R is a collaborative project with many contributors. 234s Type 'contributors()' for more information and 234s 'citation()' on how to cite R or R packages in publications. 234s 234s Type 'demo()' for some demos, 'help()' for on-line help, or 234s 'help.start()' for an HTML browser interface to help. 234s Type 'q()' to quit R. 234s 234s > suppressPackageStartupMessages(library(stars)) 235s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 235s > x = read_stars(tif) 235s > (xx = x[,c(1:347,349),c(1:350,352),]) # rectilinear: one-but-last row & col missing 235s stars object with 3 dimensions and 1 attribute 235s attribute(s): 235s Min. 1st Qu. Median Mean 3rd Qu. Max. 235s L7_ETMs.tif 1 54 69 68.9915 86 255 235s dimension(s): 235s from to refsys point 235s x 1 348 SIRGAS 2000 / UTM zone 25S FALSE 235s y 1 351 SIRGAS 2000 / UTM zone 25S FALSE 235s band 1 6 NA NA 235s values x/y 235s x [288790.5,288819),...,[298708.5,298737) [x] 235s y [9120747,9120718),...,[9110743,9110715) [y] 235s band NULL 235s > image(xx) # chooses useRaster itself 235s > # see also tidy.R for a ggplot example, leaving out the row. 235s > 235s > m = matrix(1:16, 4, 4) 235s > x = 1:4 235s > y = 2:5 235s > (st = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 235s stars object with 2 dimensions and 1 attribute 235s attribute(s): 235s Min. 1st Qu. Median Mean 3rd Qu. Max. 235s m 1 4.75 8.5 8.5 12.25 16 235s dimension(s): 235s from to offset delta point x/y 235s x 1 4 1 1 FALSE [x] 235s y 1 4 2 1 FALSE [y] 235s > st = st_set_dimensions(st, 1, values = c(1,2,3,4,6)) 235s > st = st_set_dimensions(st, 2, values = c(2,3,4,5,8)) 235s > try(st_set_dimensions(st, 2, values = c(2,3,4,5,8,20))) # one too many 235s Error in st_set_dimensions(st, 2, values = c(2, 3, 4, 5, 8, 20)) : 235s > 235s > # $<-.stars: 235s > st$foo = st$m * 2 235s length of values ( 6 ) does not match length of dimension 2 ( 4 ) 235s > st 235s stars object with 2 dimensions and 2 attributes 235s attribute(s): 235s Min. 1st Qu. Median Mean 3rd Qu. Max. 235s m 1 4.75 8.5 8.5 12.25 16 235s foo 2 9.50 17.0 17.0 24.50 32 235s dimension(s): 235s from to point values x/y 235s x 1 4 FALSE [1,2),...,[4,6) [x] 235s y 1 4 FALSE [2,3),...,[5,8) [y] 235s > 235s > # st_as_sf: 235s > 235s > if (utils::packageVersion("sf") > "0.7.2") { 235s + plot(st_as_sf(st, as_points = FALSE), axes = TRUE) 235s + } 235s > 235s > image(st, text_values = TRUE, axes = TRUE) 235s > 235s BEGIN TEST redimension.R 235s 235s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 235s Copyright (C) 2025 The R Foundation for Statistical Computing 235s Platform: aarch64-unknown-linux-gnu 235s 235s R is free software and comes with ABSOLUTELY NO WARRANTY. 235s You are welcome to redistribute it under certain conditions. 235s Type 'license()' or 'licence()' for distribution details. 235s 235s R is a collaborative project with many contributors. 235s Type 'contributors()' for more information and 235s 'citation()' on how to cite R or R packages in publications. 235s 235s Type 'demo()' for some demos, 'help()' for on-line help, or 235s 'help.start()' for an HTML browser interface to help. 235s Type 'q()' to quit R. 235s 235s > suppressPackageStartupMessages(library(stars)) 236s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 236s > r = read_stars(list(a = c(tif,tif), b = c(tif, tif)), proxy = TRUE) 236s > (xx = st_redimension(r, along = list(foo = 1:4))) 236s stars_proxy object with 1 attribute in 4 file(s): 236s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 236s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [4] "[...]/L7_ETMs.tif" 236s 236s dimension(s): 236s from to offset delta refsys point x/y 236s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 236s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 236s band 1 6 NA NA NA NA 236s foo 1 4 1 1 NA NA 236s > (rr = c(xx, xx)) 236s stars_proxy object with 2 attributes in 8 file(s): 236s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 236s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [4] "[...]/L7_ETMs.tif" 236s 236s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 236s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [4] "[...]/L7_ETMs.tif" 236s 236s dimension(s): 236s from to offset delta refsys point x/y 236s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 236s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 236s band 1 6 NA NA NA NA 236s foo 1 4 1 1 NA NA 236s > # st_as_stars(rr) 236s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 236s stars_proxy object with 1 attribute in 8 file(s): 236s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif.a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 236s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s 236s dimension(s): 236s from to offset delta refsys point x/y 236s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 236s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 236s band 1 6 NA NA NA NA 236s foo 1 4 1 1 NA NA 236s bar 1 2 2001-01-01 365 days Date NA 236s > (rr = c(a = xx, b = xx)) 236s stars_proxy object with 2 attributes in 8 file(s): 236s $a 236s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [4] "[...]/L7_ETMs.tif" 236s 236s $b 236s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [4] "[...]/L7_ETMs.tif" 236s 236s dimension(s): 236s from to offset delta refsys point x/y 236s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 236s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 236s band 1 6 NA NA NA NA 236s foo 1 4 1 1 NA NA 236s > # st_as_stars(rr) 236s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 236s stars_proxy object with 1 attribute in 8 file(s): 236s $a.b 236s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 236s 236s dimension(s): 236s from to offset delta refsys point x/y 236s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 236s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 236s band 1 6 NA NA NA NA 236s foo 1 4 1 1 NA NA 236s bar 1 2 2001-01-01 365 days Date NA 236s > 236s BEGIN TEST sf.R 236s 236s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 236s Copyright (C) 2025 The R Foundation for Statistical Computing 236s Platform: aarch64-unknown-linux-gnu 236s 236s R is free software and comes with ABSOLUTELY NO WARRANTY. 236s You are welcome to redistribute it under certain conditions. 236s Type 'license()' or 'licence()' for distribution details. 236s 236s R is a collaborative project with many contributors. 236s Type 'contributors()' for more information and 236s 'citation()' on how to cite R or R packages in publications. 236s 236s Type 'demo()' for some demos, 'help()' for on-line help, or 236s 'help.start()' for an HTML browser interface to help. 236s Type 'q()' to quit R. 236s 236s > suppressPackageStartupMessages(library(stars)) 237s > library(sf) 237s > #jp2 = system.file("jp2/B01.jp2", package = "stars") 237s > #(x = read_stars(jp2, options = c("OVERVIEW_LEVEL=3"))) 237s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 237s > #(x = read_stars(tif, options = c("OVERVIEW_LEVEL=3"))) # FIXME: breaks on windows 237s > (x = read_stars(tif)[,1:20,1:20]) 237s stars object with 3 dimensions and 1 attribute 237s attribute(s): 237s Min. 1st Qu. Median Mean 3rd Qu. Max. 237s L7_ETMs.tif 17 44 58 58.19667 70 130 237s dimension(s): 237s from to offset delta refsys point x/y 237s x 1 20 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 237s y 1 20 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 237s band 1 6 NA NA NA NA 237s > # names(x) = "L7_ETM" 237s > 237s > # library(abind) 237s > # x = adrop(x) 237s > image(x) 237s > (sfc = st_as_sfc(x, as_points = FALSE)) 237s Geometry set for 400 features 237s Geometry type: POLYGON 237s Dimension: XY 237s Bounding box: xmin: 288776.3 ymin: 9120191 xmax: 289346.3 ymax: 9120761 237s Projected CRS: SIRGAS 2000 / UTM zone 25S 237s First 5 geometries: 237s POLYGON ((288776.3 9120761, 288804.8 9120761, 2... 237s POLYGON ((288804.8 9120761, 288833.3 9120761, 2... 237s POLYGON ((288833.3 9120761, 288861.8 9120761, 2... 237s POLYGON ((288861.8 9120761, 288890.3 9120761, 2... 237s > POLYGON ((288890.3 9120761, 288918.8 9120761, 2... 237s plot(sfc, add =TRUE) 237s > (sfc = st_as_sfc(x, as_points = TRUE)) 237s Geometry set for 400 features 237s Geometry type: POINT 237s Dimension: XY 237s Bounding box: xmin: 288790.5 ymin: 9120205 xmax: 289332 ymax: 9120747 237s Projected CRS: SIRGAS 2000 / UTM zone 25S 237s First 5 geometries: 237s POINT (288790.5 9120747) 237s POINT (288819 9120747) 237s POINT (288847.5 9120747) 237s POINT (288876 9120747) 237s POINT (288904.5 9120747) 237s > plot(sfc, add = TRUE) 237s > 237s > sf = st_as_sf(x, as_points = FALSE) 237s > plot(sf, border = NA) 237s > sf = st_as_sf(x[,,,1], as_points = FALSE, merge = TRUE) 237s > plot(sf, border = NA) 237s Warning message: 237s In CPL_polygonize(file, mask_name, "GTiff", "Memory", "foo", options, : 237s GDAL Message 1: DeprecationWarning: 'Memory' driver is deprecated since GDAL 3.11. Use 'MEM' onwards. Further messages of this type will be suppressed. 238s > 238s > sfc1 <- st_as_sfc(x, as_points = TRUE, use_cpp = TRUE, na.rm = FALSE) 238s > sfc2 <- st_as_sfc(x, as_points = TRUE, use_cpp = FALSE) 238s > identical(sfc1, sfc2) 238s [1] TRUE 238s > 238s > sfc1 <- st_as_sfc(x, as_points = FALSE, use_cpp = TRUE, na.rm = FALSE) 238s > sfc2 <- st_as_sfc(x, as_points = FALSE, use_cpp = FALSE) 238s > identical(sfc1, sfc2) 238s [1] TRUE 238s > 238s > # sf -> stars -> sf 238s > x = st_sfc(st_point(0:1), st_point(1:2), st_point(2:3)) 238s > m = matrix(1:9,3) 238s > colnames(m) = c("a", "b", "c") 238s > foo = st_sf(m, geom = x) 238s > x = st_as_stars(foo) 238s > c(x) 238s stars object with 1 dimensions and 3 attributes 238s attribute(s): 238s Min. 1st Qu. Median Mean 3rd Qu. Max. 238s a 1 1.5 2 2 2.5 3 238s b 4 4.5 5 5 5.5 6 238s c 7 7.5 8 8 8.5 9 238s dimension(s): 238s from to point values 238s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 238s > st_redimension(x) 238s stars object with 2 dimensions and 1 attribute 238s attribute(s): 238s Min. 1st Qu. Median Mean 3rd Qu. Max. 238s a.b.c 1 3 5 5 7 9 238s dimension(s): 238s from to point values 238s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 238s new_dim 1 3 NA a, b, c 238s > c(x, x) 238s stars object with 1 dimensions and 6 attributes 238s attribute(s): 238s Min. 1st Qu. Median Mean 3rd Qu. Max. 238s a 1 1.5 2 2 2.5 3 238s b 4 4.5 5 5 5.5 6 238s c 7 7.5 8 8 8.5 9 238s a.1 1 1.5 2 2 2.5 3 238s b.1 4 4.5 5 5 5.5 6 238s c.1 7 7.5 8 8 8.5 9 238s dimension(s): 238s from to point values 238s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 238s > (y = st_redimension(x, along = list(time = as.Date("2017-11-27") + 0:2))) 238s stars object with 2 dimensions and 1 attribute 238s attribute(s): 238s Min. 1st Qu. Median Mean 3rd Qu. Max. 238s a.b.c 1 3 5 5 7 9 238s dimension(s): 238s from to offset delta refsys point values 238s geom 1 3 NA NA NA TRUE POINT (0 1),...,POINT (2 3) 238s time 1 3 2017-11-27 1 days Date NA NULL 238s > st_as_sf(y) 238s Simple feature collection with 3 features and 3 fields 238s Geometry type: POINT 238s Dimension: XY 238s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 238s CRS: NA 238s 2017-11-27 2017-11-28 2017-11-29 geom 238s 1 1 4 7 POINT (0 1) 238s 2 2 5 8 POINT (1 2) 238s 3 3 6 9 POINT (2 3) 238s > st_as_sf(st_as_stars(foo)) 238s Simple feature collection with 3 features and 3 fields 238s Geometry type: POINT 238s Dimension: XY 238s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 238s CRS: NA 238s a b c geom 238s 1 1 4 7 POINT (0 1) 238s 2 2 5 8 POINT (1 2) 238s 3 3 6 9 POINT (2 3) 238s > 238s > c(x,x,along=1) # NEEDS FIXING! 238s stars object with 1 dimensions and 3 attributes 238s attribute(s): 238s Min. 1st Qu. Median Mean 3rd Qu. Max. 238s a 1 1.25 2 2 2.75 3 238s b 4 4.25 5 5 5.75 6 238s c 7 7.25 8 8 8.75 9 238s dimension(s): 238s from to point values 238s geom 1 6 TRUE POINT (0 1),...,POINT (2 3) 238s > # st_as_stars.sfc 238s > st_as_stars(st_geometry(st_as_sf(y)), nx = 10, ny = 10, as_points = FALSE) 238s stars object with 2 dimensions and 1 attribute 238s attribute(s): 238s Min. 1st Qu. Median Mean 3rd Qu. Max. 238s values 0 0 0 0.06 0 1 238s dimension(s): 238s from to offset delta x/y 238s x 1 10 0 0.2 [x] 238s y 1 10 3 -0.2 [y] 238s > 238s BEGIN TEST sp.R 238s 238s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 238s Copyright (C) 2025 The R Foundation for Statistical Computing 238s Platform: aarch64-unknown-linux-gnu 238s 238s R is free software and comes with ABSOLUTELY NO WARRANTY. 238s You are welcome to redistribute it under certain conditions. 238s Type 'license()' or 'licence()' for distribution details. 238s 238s R is a collaborative project with many contributors. 238s Type 'contributors()' for more information and 238s 'citation()' on how to cite R or R packages in publications. 238s 238s Type 'demo()' for some demos, 'help()' for on-line help, or 238s 'help.start()' for an HTML browser interface to help. 238s Type 'q()' to quit R. 238s 238s > options(rgdal_show_exportToProj4_warnings = "none") 238s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE))) { 238s + demo(meuse) 238s + # remove +init=xxx 238s + meuse@proj4string = CRS( 238s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 238s + ) 238s + meuse.grid@proj4string = CRS( 238s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 238s + ) 238s + 238s + suppressPackageStartupMessages(library(stars)) 238s + (m = st_as_stars(meuse)) 238s + (gr = st_as_stars(meuse.grid)) 238s + 238s + m2 = as(m, "Spatial") 238s + summary(m2) 238s + gr2 = as(gr, "Spatial") 238s + summary(gr2) 238s + 238s + all.equal(meuse, m2, check.attributes = FALSE) 238s + fullgrid(meuse.grid) = TRUE 238s + all.equal(meuse.grid, gr2, check.attributes = FALSE) 238s + 238s + #all.equal(meuse, m2) 238s + #all.equal(meuse.grid, gr2) 238s + } 238s 238s 238s demo(meuse) 238s ---- ~~~~~ 238s 238s > require(sp) 238s 238s > crs = CRS("EPSG:28992") 238s 238s > data("meuse") 238s 238s > coordinates(meuse) <- ~x+y 238s 238s > proj4string(meuse) <- crs 239s 239s > data("meuse.grid") 239s 239s > coordinates(meuse.grid) <- ~x+y 239s 239s > gridded(meuse.grid) <- TRUE 239s 239s > proj4string(meuse.grid) <- crs 239s 239s > data("meuse.riv") 239s 239s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv"))) 239s 239s > proj4string(meuse.riv) <- crs 239s 239s > data("meuse.area") 239s 239s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area"))) 239s 239s > proj4string(meuse.area) <- crs 239s [1] TRUE 239s > 239s BEGIN TEST spacetime.R 239s 239s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 239s Copyright (C) 2025 The R Foundation for Statistical Computing 239s Platform: aarch64-unknown-linux-gnu 239s 239s R is free software and comes with ABSOLUTELY NO WARRANTY. 239s You are welcome to redistribute it under certain conditions. 239s Type 'license()' or 'licence()' for distribution details. 239s 239s R is a collaborative project with many contributors. 239s Type 'contributors()' for more information and 239s 'citation()' on how to cite R or R packages in publications. 239s 239s Type 'demo()' for some demos, 'help()' for on-line help, or 239s 'help.start()' for an HTML browser interface to help. 239s Type 'q()' to quit R. 239s 239s > suppressPackageStartupMessages(library(stars)) 240s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 240s + set.seed(1331) 240s + Sys.setenv(TZ="UTC") 240s + example(STFDF) 240s + 240s + x = st_as_stars(stfdf) 240s + xx = as(x, "STFDF") 240s + 240s + # as.xts.stars: 240s + library(xts) 240s + xts = as.xts(x) 240s + st_as_stars(xts) 240s + st_as_stars(xts, dimensions = st_dimensions(x)) 240s + 240s + library(sp) 240s + pts = SpatialPoints(rbind(c(0,0), c(0,1), c(1,0), c(1,1))) 240s + gridded(pts) = TRUE 240s + 240s + tm = xts(1:10, as.Date("2010-01-01")+0:9) 240s + stfdf = STFDF(pts, tm, data.frame(foo = seq_len(length(pts) * length(tm)))) 240s + x = st_as_stars(stfdf) 240s + xx = as(x, "STFDF") 240s + 240s + x = st_as_stars(as(stfdf, "STSDF")) 240s + } 240s 240s STFDF> sp = cbind(x = c(0,0,1), y = c(0,1,1)) 240s 240s STFDF> row.names(sp) = paste("point", 1:nrow(sp), sep="") 240s 240s STFDF> library(sp) 240s 240s STFDF> sp = SpatialPoints(sp) 240s 240s STFDF> time = as.POSIXct("2010-08-05")+3600*(10:13) 240s 240s STFDF> m = c(10,20,30) # means for each of the 3 point locations 240s 240s STFDF> mydata = rnorm(length(sp)*length(time),mean=rep(m, 4)) 240s 240s STFDF> IDs = paste("ID",1:length(mydata)) 240s 240s STFDF> mydata = data.frame(values = signif(mydata,3), ID=IDs) 240s 240s STFDF> stfdf = STFDF(sp, time, mydata) 240s 240s STFDF> stfdf 240s An object of class "STFDF" 240s Slot "data": 240s values ID 240s 1 9.38 ID 1 240s 2 21.10 ID 2 240s 3 29.80 ID 3 240s 4 11.50 ID 4 240s 5 19.80 ID 5 240s 6 31.20 ID 6 240s 7 10.40 ID 7 240s 8 20.50 ID 8 240s 9 29.80 ID 9 240s 10 10.30 ID 10 240s 11 21.40 ID 11 240s 12 29.40 ID 12 240s 240s Slot "sp": 240s SpatialPoints: 240s x y 240s point1 0 0 240s point2 0 1 240s point3 1 1 240s Coordinate Reference System (CRS) arguments: NA 240s 240s Slot "time": 240s timeIndex 240s 2010-08-05 10:00:00 1 240s 2010-08-05 11:00:00 2 240s 2010-08-05 12:00:00 3 240s 2010-08-05 13:00:00 4 240s 240s Slot "endTime": 240s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 240s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 240s 240s 240s STFDF> stfdf[1:2,] 240s An object of class "STFDF" 240s Slot "data": 240s values ID 240s 1 9.38 ID 1 240s 2 21.10 ID 2 240s 3 11.50 ID 4 240s 4 19.80 ID 5 240s 5 10.40 ID 7 240s 6 20.50 ID 8 240s 7 10.30 ID 10 240s 8 21.40 ID 11 240s 240s Slot "sp": 240s SpatialPoints: 240s x y 240s point1 0 0 240s point2 0 1 240s Coordinate Reference System (CRS) arguments: NA 240s 240s Slot "time": 240s timeIndex 240s 2010-08-05 10:00:00 1 240s 2010-08-05 11:00:00 2 240s 2010-08-05 12:00:00 3 240s 2010-08-05 13:00:00 4 240s 240s Slot "endTime": 240s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 240s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 240s 240s 240s STFDF> stfdf[,1:2] 240s An object of class "STFDF" 240s Slot "data": 240s values ID 240s 1 9.38 ID 1 240s 2 21.10 ID 2 240s 3 29.80 ID 3 240s 4 11.50 ID 4 240s 5 19.80 ID 5 240s 6 31.20 ID 6 240s 240s Slot "sp": 240s SpatialPoints: 240s x y 240s point1 0 0 240s point2 0 1 240s point3 1 1 240s Coordinate Reference System (CRS) arguments: NA 240s 240s Slot "time": 240s timeIndex 240s 2010-08-05 10:00:00 1 240s 2010-08-05 11:00:00 2 240s 240s Slot "endTime": 240s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 240s 240s 240s STFDF> stfdf[,,2] 240s An object of class "STFDF" 240s Slot "data": 240s ID 240s 1 ID 1 240s 2 ID 2 240s 3 ID 3 240s 4 ID 4 240s 5 ID 5 240s 6 ID 6 240s 7 ID 7 240s 8 ID 8 240s 9 ID 9 240s 10 ID 10 240s 11 ID 11 240s 12 ID 12 240s 240s Slot "sp": 240s SpatialPoints: 240s x y 240s point1 0 0 240s point2 0 1 240s point3 1 1 240s Coordinate Reference System (CRS) arguments: NA 240s 240s Slot "time": 240s timeIndex 240s 2010-08-05 10:00:00 1 240s 2010-08-05 11:00:00 2 240s 2010-08-05 12:00:00 3 240s 2010-08-05 13:00:00 4 240s 240s Slot "endTime": 240s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 240s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 240s 240s 240s STFDF> stfdf[,,"values"] 240s An object of class "STFDF" 240s Slot "data": 240s values 240s 1 9.38 240s 2 21.10 240s 3 29.80 240s 4 11.50 240s 5 19.80 240s 6 31.20 240s 7 10.40 240s 8 20.50 240s 9 29.80 240s 10 10.30 240s 11 21.40 240s 12 29.40 240s 240s Slot "sp": 240s SpatialPoints: 240s x y 240s point1 0 0 240s point2 0 1 240s point3 1 1 240s Coordinate Reference System (CRS) arguments: NA 240s 240s Slot "time": 240s timeIndex 240s 2010-08-05 10:00:00 1 240s 2010-08-05 11:00:00 2 240s 2010-08-05 12:00:00 3 240s 2010-08-05 13:00:00 4 240s 240s Slot "endTime": 240s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 240s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 240s 240s 240s STFDF> stfdf[1,] 240s values ID timeIndex 240s 2010-08-05 10:00:00 9.38 ID 1 1 240s 2010-08-05 11:00:00 11.50 ID 4 2 240s 2010-08-05 12:00:00 10.40 ID 7 3 240s 2010-08-05 13:00:00 10.30 ID 10 4 240s 240s STFDF> stfdf[,2] 240s coordinates values ID 240s 1 (0, 0) 11.5 ID 4 240s 2 (0, 1) 19.8 ID 5 240s 3 (1, 1) 31.2 ID 6 240s 240s STFDF> as(stfdf[,,1], "xts") 240s point1 point2 point3 240s 2010-08-05 10:00:00 9.38 21.1 29.8 240s 2010-08-05 11:00:00 11.50 19.8 31.2 240s 2010-08-05 12:00:00 10.40 20.5 29.8 240s 2010-08-05 13:00:00 10.30 21.4 29.4 240s 240s STFDF> as(stfdf[,,2], "xts") 240s point1 point2 point3 240s 2010-08-05 10:00:00 ID 1 ID 2 ID 3 240s 2010-08-05 11:00:00 ID 4 ID 5 ID 6 240s 2010-08-05 12:00:00 ID 7 ID 8 ID 9 240s 2010-08-05 13:00:00 ID 10 ID 11 ID 12 240s 240s STFDF> # examples for [[, [[<-, $ and $<- 240s STFDF> stfdf[[1]] 240s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 240s 240s STFDF> stfdf[["values"]] 240s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 240s 240s STFDF> stfdf[["newVal"]] <- rnorm(12) 240s 240s STFDF> stfdf$ID 240s [1] "ID 1" "ID 2" "ID 3" "ID 4" "ID 5" "ID 6" "ID 7" "ID 8" "ID 9" 240s [10] "ID 10" "ID 11" "ID 12" 240s 240s STFDF> stfdf$ID = paste("OldIDs", 1:12, sep="") 240s 240s STFDF> stfdf$NewID = paste("NewIDs", 12:1, sep="") 240s 240s STFDF> stfdf 240s An object of class "STFDF" 240s Slot "data": 240s values ID newVal NewID 240s 1 9.38 OldIDs1 -0.3125824 NewIDs12 240s 2 21.10 OldIDs2 -1.0536246 NewIDs11 240s 3 29.80 OldIDs3 -0.7188880 NewIDs10 240s 4 11.50 OldIDs4 -1.0525404 NewIDs9 240s 5 19.80 OldIDs5 -0.8441413 NewIDs8 240s 6 31.20 OldIDs6 1.1420848 NewIDs7 240s 7 10.40 OldIDs7 1.9479070 NewIDs6 240s 8 20.50 OldIDs8 -0.4512836 NewIDs5 240s 9 29.80 OldIDs9 0.6695716 NewIDs4 240s 10 10.30 OldIDs10 0.1269003 NewIDs3 240s 11 21.40 OldIDs11 -0.7273297 NewIDs2 240s 12 29.40 OldIDs12 -0.8151803 NewIDs1 240s 240s Slot "sp": 240s SpatialPoints: 240s x y 240s point1 0 0 240s point2 0 1 240s point3 1 1 240s Coordinate Reference System (CRS) arguments: NA 240s 240s Slot "time": 240s timeIndex 240s 2010-08-05 10:00:00 1 240s 2010-08-05 11:00:00 2 240s 2010-08-05 12:00:00 3 240s 2010-08-05 13:00:00 4 240s 240s Slot "endTime": 240s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 240s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 240s 240s 240s STFDF> x = stfdf[stfdf[1:2,],] 240s 240s STFDF> all.equal(x, stfdf[1:2,]) 240s [1] TRUE 240s 240s STFDF> all.equal(stfdf, stfdf[stfdf,]) # converts character to factor... 241s [1] TRUE 241s Loading required package: zoo 241s 241s Attaching package: 'zoo' 241s 241s The following objects are masked from 'package:base': 241s 241s as.Date, as.Date.numeric 241s 241s only the first attribute will used; maybe use merge() first? 241s > 241s BEGIN TEST spatstat.R 241s 241s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 241s Copyright (C) 2025 The R Foundation for Statistical Computing 241s Platform: aarch64-unknown-linux-gnu 241s 241s R is free software and comes with ABSOLUTELY NO WARRANTY. 241s You are welcome to redistribute it under certain conditions. 241s Type 'license()' or 'licence()' for distribution details. 241s 241s R is a collaborative project with many contributors. 241s Type 'contributors()' for more information and 241s 'citation()' on how to cite R or R packages in publications. 241s 241s Type 'demo()' for some demos, 'help()' for on-line help, or 241s 'help.start()' for an HTML browser interface to help. 241s Type 'q()' to quit R. 241s 241s > suppressPackageStartupMessages(library(sf)) 241s > 241s > library(stars) 241s Loading required package: abind 242s > if (suppressPackageStartupMessages(require(spatstat.geom, quietly = TRUE))) { 242s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 242s + s = adrop(read_stars(tif)[,,,1]) > 70 242s + plot(s) 242s + m = as.owin(s) 242s + plot(m) 242s + print(table(m$m)) 242s + } 243s 243s FALSE TRUE 243s 39494 83354 243s > 243s BEGIN TEST stars.R 243s 243s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 243s Copyright (C) 2025 The R Foundation for Statistical Computing 243s Platform: aarch64-unknown-linux-gnu 243s 243s R is free software and comes with ABSOLUTELY NO WARRANTY. 243s You are welcome to redistribute it under certain conditions. 243s Type 'license()' or 'licence()' for distribution details. 243s 243s R is a collaborative project with many contributors. 243s Type 'contributors()' for more information and 243s 'citation()' on how to cite R or R packages in publications. 243s 243s Type 'demo()' for some demos, 'help()' for on-line help, or 243s 'help.start()' for an HTML browser interface to help. 243s Type 'q()' to quit R. 243s 243s > Sys.setenv(TZ="UTC") 243s > suppressPackageStartupMessages(library(stars)) 244s > set.seed(13521) # runif 244s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 244s > (x_ = read_stars(c(tif,tif))) # FIXME: not what you'd expect 244s stars object with 3 dimensions and 2 attributes 244s attribute(s): 244s Min. 1st Qu. Median Mean 3rd Qu. Max. 244s L7_ETMs.tif 1 54 69 68.91242 86 255 244s L7_ETMs.tif.1 1 54 69 68.91242 86 255 244s dimension(s): 244s from to offset delta refsys point x/y 244s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 244s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 244s band 1 6 NA NA NA NA 244s > (x = read_stars(tif)) 244s stars object with 3 dimensions and 1 attribute 244s attribute(s): 244s Min. 1st Qu. Median Mean 3rd Qu. Max. 244s L7_ETMs.tif 1 54 69 68.91242 86 255 244s dimension(s): 244s from to offset delta refsys point x/y 244s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 244s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 244s band 1 6 NA NA NA NA 244s > # image(x) 244s > gdal_crs(tif) 244s Coordinate Reference System: 244s User input: PROJCS["SIRGAS 2000 / UTM zone 25S",GEOGCS["SIRGAS 2000",DATUM["Sistema_de_Referencia_Geocentrico_para_las_AmericaS_2000",SPHEROID["GRS 1980",6378137,298.257222101,AUTHORITY["EPSG","7019"]],AUTHORITY["EPSG","6674"]],PRIMEM["Greenwich",0,AUTHORITY["EPSG","8901"]],UNIT["degree",0.0174532925199433,AUTHORITY["EPSG","9122"]],AUTHORITY["EPSG","4674"]],PROJECTION["Transverse_Mercator"],PARAMETER["latitude_of_origin",0],PARAMETER["central_meridian",-33],PARAMETER["scale_factor",0.9996],PARAMETER["false_easting",500000],PARAMETER["false_northing",10000000],UNIT["metre",1,AUTHORITY["EPSG","9001"]],AXIS["Easting",EAST],AXIS["Northing",NORTH],AUTHORITY["EPSG","31985"]] 244s wkt: 244s PROJCRS["SIRGAS 2000 / UTM zone 25S", 244s BASEGEOGCRS["SIRGAS 2000", 244s DATUM["Sistema de Referencia Geocentrico para las AmericaS 2000", 244s ELLIPSOID["GRS 1980",6378137,298.257222101, 244s LENGTHUNIT["metre",1]]], 244s PRIMEM["Greenwich",0, 244s ANGLEUNIT["degree",0.0174532925199433]], 244s ID["EPSG",4674]], 244s CONVERSION["UTM zone 25S", 244s METHOD["Transverse Mercator", 244s ID["EPSG",9807]], 244s PARAMETER["Latitude of natural origin",0, 244s ANGLEUNIT["degree",0.0174532925199433], 244s ID["EPSG",8801]], 244s PARAMETER["Longitude of natural origin",-33, 244s ANGLEUNIT["degree",0.0174532925199433], 244s ID["EPSG",8802]], 244s PARAMETER["Scale factor at natural origin",0.9996, 244s SCALEUNIT["unity",1], 244s ID["EPSG",8805]], 244s PARAMETER["False easting",500000, 244s LENGTHUNIT["metre",1], 244s ID["EPSG",8806]], 244s PARAMETER["False northing",10000000, 244s LENGTHUNIT["metre",1], 244s ID["EPSG",8807]]], 244s CS[Cartesian,2], 244s AXIS["easting",east, 244s ORDER[1], 244s LENGTHUNIT["metre",1]], 244s AXIS["northing",north, 244s ORDER[2], 244s LENGTHUNIT["metre",1]], 244s ID["EPSG",31985]] 244s > plot(x) 244s > plot(x, join_zlim = FALSE) 245s > x %>% st_set_dimensions(names = c('a', 'b', 'c')) 245s stars object with 3 dimensions and 1 attribute 245s attribute(s): 245s Min. 1st Qu. Median Mean 3rd Qu. Max. 245s L7_ETMs.tif 1 54 69 68.91242 86 255 245s dimension(s): 245s from to offset delta refsys point x/y 245s a 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 245s b 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 245s c 1 6 NA NA NA NA 245s > st_get_dimension_values(x, 3) 245s [1] 1 2 3 4 5 6 245s > 245s > (x1 = st_set_dimensions(x, "band", values = c(1,2,3,4,5,7), names = "band_number", point = TRUE)) 245s stars object with 3 dimensions and 1 attribute 245s attribute(s): 245s Min. 1st Qu. Median Mean 3rd Qu. Max. 245s L7_ETMs.tif 1 54 69 68.91242 86 255 245s dimension(s): 245s from to offset delta refsys point values x/y 245s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 245s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 245s band_number 1 6 NA NA NA TRUE 1,...,7 245s > rbind(c(0.45,0.515), c(0.525,0.605), c(0.63,0.69), c(0.775,0.90), c(1.55,1.75), c(2.08,2.35)) %>% 245s + units::set_units(um) -> bw # units::set_units(µm) -> bw 245s > # set bandwidth midpoint: 245s > (x2 = st_set_dimensions(x, "band", values = 0.5 * (bw[,1]+bw[,2]), 245s + names = "bandwidth_midpoint", point = TRUE)) 245s stars object with 3 dimensions and 1 attribute 245s attribute(s): 245s Min. 1st Qu. Median Mean 3rd Qu. Max. 245s L7_ETMs.tif 1 54 69 68.91242 86 255 245s dimension(s): 245s from to offset delta refsys point 245s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 245s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 245s bandwidth_midpoint 1 6 NA NA udunits TRUE 245s values x/y 245s x NULL [x] 245s y NULL [y] 245s bandwidth_midpoint 0.4825 [um],...,2.215 [um] 245s > # set bandwidth intervals: 245s > (x3 = st_set_dimensions(x, "band", values = make_intervals(bw), names = "bandwidth")) 245s stars object with 3 dimensions and 1 attribute 245s attribute(s): 245s Min. 1st Qu. Median Mean 3rd Qu. Max. 245s L7_ETMs.tif 1 54 69 68.91242 86 255 245s dimension(s): 245s from to offset delta refsys point 245s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 245s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 245s bandwidth 1 6 NA NA udunits NA 245s values x/y 245s x NULL [x] 245s y NULL [y] 245s bandwidth [0.45,0.515) [um],...,[2.08,2.35) [um] 245s > 245s > x + x 245s stars object with 3 dimensions and 1 attribute 245s attribute(s): 245s Min. 1st Qu. Median Mean 3rd Qu. Max. 245s L7_ETMs.tif 2 108 138 137.8248 172 510 245s dimension(s): 245s from to offset delta refsys point x/y 245s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 245s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 245s band 1 6 NA NA NA NA 245s > x * x 245s stars object with 3 dimensions and 1 attribute 245s attribute(s): 245s Min. 1st Qu. Median Mean 3rd Qu. Max. 245s L7_ETMs.tif 1 2916 4761 5512.41 7396 65025 245s dimension(s): 246s from to offset delta refsys point x/y 246s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 246s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 246s band 1 6 NA NA NA NA 246s > x[,,,1:3] 246s stars object with 3 dimensions and 1 attribute 246s attribute(s): 246s Min. 1st Qu. Median Mean 3rd Qu. Max. 246s L7_ETMs.tif 21 58 70 70.36041 83 255 246s dimension(s): 246s from to offset delta refsys point x/y 246s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 246s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 246s band 1 3 NA NA NA NA 246s > x[,1:100,100:200,] 246s stars object with 3 dimensions and 1 attribute 246s attribute(s): 246s Min. 1st Qu. Median Mean 3rd Qu. Max. 246s L7_ETMs.tif 13 54 65 67.21531 77 252 246s dimension(s): 246s from to offset delta refsys point x/y 246s x 1 100 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 246s y 100 200 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 246s band 1 6 NA NA NA NA 246s > sqrt(x) 246s stars object with 3 dimensions and 1 attribute 246s attribute(s): 246s Min. 1st Qu. Median Mean 3rd Qu. Max. 246s L7_ETMs.tif 1 7.348469 8.306624 8.094006 9.273618 15.96872 246s dimension(s): 246s from to offset delta refsys point x/y 246s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 246s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 246s band 1 6 NA NA NA NA 246s > st_apply(x, 3, min) 246s stars object with 1 dimensions and 1 attribute 246s attribute(s): 246s Min. 1st Qu. Median Mean 3rd Qu. Max. 246s min 1 3 15 18.5 29.25 47 246s dimension(s): 246s from to 246s band 1 6 246s > st_apply(x, 1:2, max) 246s stars object with 2 dimensions and 1 attribute 246s attribute(s): 246s Min. 1st Qu. Median Mean 3rd Qu. Max. 246s max 55 85 96 99.36018 113 255 246s dimension(s): 246s from to offset delta refsys point x/y 246s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 246s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 246s > st_apply(x, 1:2, range) 247s stars object with 3 dimensions and 1 attribute 247s attribute(s): 247s Min. 1st Qu. Median Mean 3rd Qu. Max. 247s L7_ETMs.tif 1 50 71 72.43565 96 255 247s dimension(s): 247s from to offset delta refsys point x/y 247s range 1 2 NA NA NA NA 247s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 247s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 247s > 247s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 247s > x = read_stars(geomatrix) 247s > y = st_transform(x, st_crs(4326)) 247s > st_coordinates(x)[1:2,] 247s x y 247s 1 1841000 1144000 247s 2 1841002 1143995 247s > 247s > nc = system.file("nc/tos_O1_2001-2002.nc", package = "stars") 247s > if (nc != "" && require(PCICt, quietly = TRUE)) { 247s + print(x <- read_stars(nc)) 247s + print(st_bbox(x)) 247s + s = st_as_stars(st_bbox(x)) # inside = NA 247s + print(st_bbox(s)) 247s + s = st_as_stars(st_bbox(x), inside = TRUE) 247s + print(st_bbox(s)) 247s + s = st_as_stars(st_bbox(x), inside = FALSE) 247s + print(st_bbox(s)) 247s + (s = st_as_stars(st_bbox(x), dy = 1)) 247s + print(st_bbox(s)) 247s + print(identical(st_as_stars(st_bbox(x), dx = 1), st_as_stars(st_bbox(x), dy = 1))) 247s + s = st_as_stars(st_bbox(x), dx = 10) 247s + print(st_bbox(s)) 247s + s = st_as_stars(st_bbox(x), dx = 20) 247s + print(st_bbox(s)) 247s + x1 = x 247s + st_crs(x1) = "OGC:CRS84" 247s + print(identical(st_as_stars(st_bbox(x1), dx = 1), st_as_stars(st_bbox(x1), dx = units::set_units(1, degree)))) 247s + 247s + df = as.data.frame(x) 247s + if (require(units, quietly = TRUE)) 247s + print(units::drop_units(x)) 247s + 247s + print(dimnames(x)) 247s + dimnames(x) <- letters[1:3] 247s + print(dimnames(x)) 247s + } # PCICt 247s > 247s > st_as_stars() 247s stars object with 2 dimensions and 1 attribute 247s attribute(s): 247s Min. 1st Qu. Median Mean 3rd Qu. Max. 247s values 0 0 0 0 0 0 247s dimension(s): 247s from to offset delta refsys x/y 247s x 1 360 -180 1 WGS 84 (CRS84) [x] 247s y 1 180 90 -1 WGS 84 (CRS84) [y] 247s > 247s > # multiple sub-datasets: 247s > nc_red = system.file("nc/reduced.nc", package = "stars") 247s > red = read_stars(nc_red) 247s sst, anom, err, ice, 247s > red 247s stars object with 4 dimensions and 4 attributes 247s attribute(s): 247s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 247s sst [degree_Celsius] -1.80 -0.03 13.655 12.9940841 24.8125 32.97 4448 247s anom [degree_Celsius] -10.16 -0.58 -0.080 -0.1855812 0.2100 2.99 4448 247s err [degree_Celsius] 0.11 0.16 0.270 0.2626872 0.3200 0.84 4448 247s ice [percent] 0.01 0.47 0.920 0.7178118 0.9600 1.00 13266 247s dimension(s): 247s from to offset delta refsys x/y 247s x 1 180 -1 2 NA [x] 247s y 1 90 90 -2 NA [y] 247s zlev 1 1 0 [m] NA NA 247s time 1 1 1981-12-31 UTC NA POSIXct 247s > plot(red) 247s > 247s > x = st_xy2sfc(read_stars(tif)[,1:10,1:10,], as_points = FALSE) 247s > st_bbox(x) 247s xmin ymin xmax ymax 247s 288776.3 9120475.8 289061.3 9120760.8 247s > x = read_stars(tif) 247s > merge(split(x, "band")) 248s stars object with 3 dimensions and 1 attribute 248s attribute(s): 248s Min. 1st Qu. Median Mean 3rd Qu. Max. 248s X1.X2.X3.X4.X5.X6 1 54 69 68.91242 86 255 248s dimension(s): 248s from to offset delta refsys point values 248s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 248s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 248s attributes 1 6 NA NA NA NA X1,...,X6 248s x/y 248s x [x] 248s y [y] 248s attributes 248s > 248s > read_stars(c(tif,tif)) # merges as attributes 248s stars object with 3 dimensions and 2 attributes 248s attribute(s): 248s Min. 1st Qu. Median Mean 3rd Qu. Max. 248s L7_ETMs.tif 1 54 69 68.91242 86 255 248s L7_ETMs.tif.1 1 54 69 68.91242 86 255 248s dimension(s): 249s from to offset delta refsys point x/y 249s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 249s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 249s band 1 6 NA NA NA NA 249s > read_stars(c(tif,tif), along = "sensor") 249s stars object with 4 dimensions and 1 attribute 249s attribute(s), summary of first 1e+05 cells: 249s Min. 1st Qu. Median Mean 3rd Qu. Max. 249s L7_ETMs.tif 47 65 76 77.3419 87 255 249s dimension(s): 249s from to offset delta refsys point x/y 249s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 249s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 249s band 1 6 NA NA NA NA 249s sensor 1 2 NA NA NA NA 249s > read_stars(c(tif,tif), along = 4) 249s stars object with 4 dimensions and 1 attribute 249s attribute(s), summary of first 1e+05 cells: 249s Min. 1st Qu. Median Mean 3rd Qu. Max. 249s L7_ETMs.tif 47 65 76 77.3419 87 255 249s dimension(s): 249s from to offset delta refsys point x/y 249s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 249s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 249s band 1 6 NA NA NA NA 249s new_dim 1 2 NA NA NA NA 249s > read_stars(c(tif,tif), along = "band") 249s stars object with 3 dimensions and 1 attribute 249s attribute(s), summary of first 1e+05 cells: 249s Min. 1st Qu. Median Mean 3rd Qu. Max. 249s L7_ETMs.tif 47 65 76 77.3419 87 255 249s dimension(s): 249s from to offset delta refsys point x/y 249s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 249s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 249s band 1 12 NA NA NA NA 249s > read_stars(c(tif,tif), along = 3) 249s stars object with 3 dimensions and 1 attribute 249s attribute(s), summary of first 1e+05 cells: 249s Min. 1st Qu. Median Mean 3rd Qu. Max. 249s L7_ETMs.tif 47 65 76 77.3419 87 255 249s dimension(s): 249s from to offset delta refsys point x/y 249s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 249s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 249s band 1 12 NA NA NA NA 249s > 249s > # cut: 249s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 249s > x = read_stars(tif) 249s > cut(x, c(0, 50, 100, 255)) 249s stars object with 3 dimensions and 1 attribute 249s attribute(s): 249s L7_ETMs.tif 249s (0,50] :156060 249s (50,100] :503764 249s (100,255]: 77264 249s dimension(s): 249s from to offset delta refsys point x/y 249s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 249s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 249s band 1 6 NA NA NA NA 249s > cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255)) 249s stars object with 2 dimensions and 1 attribute 249s attribute(s): 249s L7_ETMs.tif 249s (0,50] : 1 249s (50,100] :117134 249s (100,255]: 5713 249s dimension(s): 249s from to offset delta refsys point x/y 249s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 249s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 249s > plot(cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255))) 249s > 249s > st_bbox(st_dimensions(x)) 249s xmin ymin xmax ymax 249s 288776.3 9110728.8 298722.8 9120760.8 249s > x[x < 0] = NA 249s > x[is.na(x)] = 0 249s > 249s > # c: 249s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 249s > if (FALSE && f != "") { 249s + files = c("avhrr-only-v2.19810901.nc", 249s + "avhrr-only-v2.19810902.nc", 249s + "avhrr-only-v2.19810903.nc", 249s + "avhrr-only-v2.19810904.nc", 249s + "avhrr-only-v2.19810905.nc", 249s + "avhrr-only-v2.19810906.nc", 249s + "avhrr-only-v2.19810907.nc", 249s + "avhrr-only-v2.19810908.nc", 249s + "avhrr-only-v2.19810909.nc") 249s + l = list() 249s + for (f in files) { 249s + from = system.file(paste0("netcdf/", f), package = "starsdata") 249s + l[[f]] = read_stars(from, sub = c("sst", "anom")) 249s + } 249s + ret = do.call(c, l) 249s + print(ret) 249s + ret = adrop(c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 249s + print(ret) 249s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 249s + #print(ret) 249s + } 249s > 249s > st_dimensions(list(matrix(1, 4, 4))) # st_dimensions.default 249s from to point values 249s X1 1 1 FALSE 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 249s > 249s > if (FALSE && require("starsdata", quietly = TRUE)) { 249s + # curvilinear: 249s + s5p = system.file( 249s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 249s + package = "starsdata") 249s + print(s5p) 249s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 249s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 249s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 249s + lat = read_stars(lat_ds) 249s + lon = read_stars(lon_ds) 249s + nit = read_stars(nit_ds) 249s + nit[[1]][nit[[1]] > 9e+36] = NA 249s + 249s + ll = setNames(c(lon, lat), c("x", "y")) 249s + nit.c = st_as_stars(nit, curvilinear = ll) 249s + print(nit.c) 249s + 249s + s5p = system.file( 249s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 249s + package = "starsdata") 249s + nit.c2 = read_stars(s5p, 249s + sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 249s + curvilinear = c("//PRODUCT/latitude", "//PRODUCT/longitude")) 249s + print(all.equal(nit.c, nit.c2)) 249s + } 249s > 249s BEGIN TEST subset.R 250s 250s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 250s Copyright (C) 2025 The R Foundation for Statistical Computing 250s Platform: aarch64-unknown-linux-gnu 250s 250s R is free software and comes with ABSOLUTELY NO WARRANTY. 250s You are welcome to redistribute it under certain conditions. 250s Type 'license()' or 'licence()' for distribution details. 250s 250s R is a collaborative project with many contributors. 250s Type 'contributors()' for more information and 250s 'citation()' on how to cite R or R packages in publications. 250s 250s Type 'demo()' for some demos, 'help()' for on-line help, or 250s 'help.start()' for an HTML browser interface to help. 250s Type 'q()' to quit R. 250s 250s > suppressPackageStartupMessages(library(stars)) 250s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 250s > x = read_stars(tif) 250s > y = st_set_dimensions(x, "band", point = TRUE) 250s > y[,1:10, 1:10, c(1,4,3,2)] 250s stars object with 3 dimensions and 1 attribute 250s attribute(s): 250s Min. 1st Qu. Median Mean 3rd Qu. Max. 250s L7_ETMs.tif 25 45 57 56.535 64 97 250s dimension(s): 250s from to offset delta refsys point values x/y 250s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 250s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 250s band 1 4 NA NA NA TRUE 1,...,2 250s > y = st_set_dimensions(x, "band", point = NA) 250s > y[,1:10, 1:10, c(1,4,3,2)] 250s stars object with 3 dimensions and 1 attribute 250s attribute(s): 250s Min. 1st Qu. Median Mean 3rd Qu. Max. 250s L7_ETMs.tif 25 45 57 56.535 64 97 250s dimension(s): 250s from to offset delta refsys point values x/y 250s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 250s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 250s band 1 4 NA NA NA NA [1,2),...,[2,3) 250s > y = st_set_dimensions(x, "band", point = FALSE) 250s > y[,1:10, 1:10, c(1,4,3,2)] 250s stars object with 3 dimensions and 1 attribute 250s attribute(s): 250s Min. 1st Qu. Median Mean 3rd Qu. Max. 250s L7_ETMs.tif 25 45 57 56.535 64 97 250s dimension(s): 250s from to offset delta refsys point values x/y 250s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 250s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 250s band 1 4 NA NA NA FALSE [1,2),...,[2,3) 250s > y = st_set_dimensions(x, "band", values = letters[1:6]) 250s > y[,1:10, 1:10, c(1,4,3,2)] 250s stars object with 3 dimensions and 1 attribute 250s attribute(s): 250s Min. 1st Qu. Median Mean 3rd Qu. Max. 250s L7_ETMs.tif 25 45 57 56.535 64 97 250s dimension(s): 251s from to offset delta refsys point values x/y 251s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 251s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 251s band 1 4 NA NA NA NA a,...,b 251s > y = st_set_dimensions(x, "band", values = letters[1:6], point = NA) 251s > y[,1:10, 1:10, c(1,4,3,2)] 251s stars object with 3 dimensions and 1 attribute 251s attribute(s): 251s Min. 1st Qu. Median Mean 3rd Qu. Max. 251s L7_ETMs.tif 25 45 57 56.535 64 97 251s dimension(s): 251s from to offset delta refsys point values x/y 251s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 251s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 251s band 1 4 NA NA NA NA a,...,b 251s > y = st_set_dimensions(x, "band", values = letters[1:6], point = TRUE) 251s > y[,1:10, 1:10, c(1,4,3,2)] 251s stars object with 3 dimensions and 1 attribute 251s attribute(s): 251s Min. 1st Qu. Median Mean 3rd Qu. Max. 251s L7_ETMs.tif 25 45 57 56.535 64 97 251s dimension(s): 251s from to offset delta refsys point values x/y 251s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 251s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 251s band 1 4 NA NA NA TRUE a,...,b 251s > 251s BEGIN TEST testthat.R 251s 251s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 251s Copyright (C) 2025 The R Foundation for Statistical Computing 251s Platform: aarch64-unknown-linux-gnu 251s 251s R is free software and comes with ABSOLUTELY NO WARRANTY. 251s You are welcome to redistribute it under certain conditions. 251s Type 'license()' or 'licence()' for distribution details. 251s 251s R is a collaborative project with many contributors. 251s Type 'contributors()' for more information and 251s 'citation()' on how to cite R or R packages in publications. 251s 251s Type 'demo()' for some demos, 'help()' for on-line help, or 251s 'help.start()' for an HTML browser interface to help. 251s Type 'q()' to quit R. 251s 251s > ## load dependencies 251s > library(testthat) 251s > suppressPackageStartupMessages(library(stars)) 251s > 251s > ## test package 251s > test_check("stars") 258s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 258s 258s == Skipped tests (5) =========================================================== 258s * On CRAN (4): 'test-OpenStreetMap.R:2:3', 'test-ncdf.R:1:1', 258s 'test-ncproxy.R:1:1', 'test-rectilinear.R:89:3' 258s * {cubble} is not installed (1): 'test-cubble.R:2:3' 258s 258s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 271s > 271s BEGIN TEST tidy.R 271s 271s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 271s Copyright (C) 2025 The R Foundation for Statistical Computing 271s Platform: aarch64-unknown-linux-gnu 271s 271s R is free software and comes with ABSOLUTELY NO WARRANTY. 271s You are welcome to redistribute it under certain conditions. 271s Type 'license()' or 'licence()' for distribution details. 271s 271s R is a collaborative project with many contributors. 271s Type 'contributors()' for more information and 271s 'citation()' on how to cite R or R packages in publications. 271s 271s Type 'demo()' for some demos, 'help()' for on-line help, or 271s 'help.start()' for an HTML browser interface to help. 271s Type 'q()' to quit R. 271s 271s > suppressPackageStartupMessages(library(stars)) 271s > 271s > if (require(dplyr, quietly = TRUE)) { 271s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 271s + x <- read_stars(tif) 271s + (y <- x %>% select(L7_ETMs.tif)) 271s + (y <- x %>% filter(band > 2)) 271s + (z <- x %>% mutate(foo = 2* L7_ETMs.tif)) 271s + x %>% pull(L7_ETMs.tif) %>% class() 271s + x %>% filter(x > 289900) 271s + x %>% slice("x", 50:100) 271s + 271s + suppressPackageStartupMessages(library(ggplot2)) 271s + ggplot() + geom_stars(data = x) + coord_equal() + facet_wrap(~band) 271s + ggplot() + geom_stars(data = x[,c(1:50,52:100),c(1:45, 50:60)]) + 271s + coord_equal() 271s + ggplot() + geom_stars(data = x[,1:10,1:10,1:2], sf = TRUE) + facet_wrap(~band) 271s + 271s + 271s + # see https://github.com/r-spatial/stars/issues/539 : 271s + x <- read_stars(system.file("tif/L7_ETMs.tif", package = "stars")) 271s + y <- transmute(x, L7_ETMs.tif = units::set_units(L7_ETMs.tif, degree_C)) # same as x but with units 271s + 271s + x - slice(x, 'band', 1) # runs as expected, recycling the second object 271s + try(y - slice(x, 'band', 1)) # fails as expected because x is unitless 271s + try(x - slice(y, 'band', 1)) # fails as expected 271s + y - slice(y, 'band', 1) # runs as expected 271s + } 271s stars object with 3 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. 271s L7_ETMs.tif [degree_Celsius] -184 -19 -8 -10.2353 0 131 271s dimension(s): 271s from to offset delta refsys point x/y 271s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 271s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 271s band 1 6 NA NA NA NA 271s > 271s BEGIN TEST transform.R 271s 271s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 271s Copyright (C) 2025 The R Foundation for Statistical Computing 271s Platform: aarch64-unknown-linux-gnu 271s 271s R is free software and comes with ABSOLUTELY NO WARRANTY. 271s You are welcome to redistribute it under certain conditions. 271s Type 'license()' or 'licence()' for distribution details. 271s 271s R is a collaborative project with many contributors. 271s Type 'contributors()' for more information and 271s 'citation()' on how to cite R or R packages in publications. 271s 271s Type 'demo()' for some demos, 'help()' for on-line help, or 271s 'help.start()' for an HTML browser interface to help. 271s Type 'q()' to quit R. 271s 271s > suppressPackageStartupMessages(library(stars)) 271s > #suppressPackageStartupMessages(library(lwgeom)) 271s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 271s > (x = read_stars(geomatrix)) 271s stars object with 2 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. 271s geomatrix.tif 74 107 123 126.765 132 255 271s dimension(s): 271s from to offset delta refsys point x/y 271s x 1 20 1841002 1.5 WGS 84 / UTM zone 11N TRUE [x] 271s y 1 20 1144003 -1.5 WGS 84 / UTM zone 11N TRUE [y] 271s sheared raster with parameters: -5 -5 271s > new = st_crs(4326) 271s > y = st_transform(x, new) 271s > plot(st_transform(st_as_sfc(st_bbox(x)), new), col = NA, border = 'red') 271s > plot(st_as_sfc(y, as_points=FALSE), col = NA, border = 'green', axes = TRUE, add = TRUE) 271s > image(y, add = TRUE) 271s > plot(st_as_sfc(y, as_points=TRUE), pch=3, cex=.5, col = 'blue', add = TRUE) 271s > plot(st_transform(st_as_sfc(x, as_points=FALSE), new), add = TRUE) 271s > 271s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 271s > x = read_stars(tif)[,1:10,1:10,1:3] 271s > x_ = st_transform(x, st_crs(4326)) 271s > ## IGNORE_RDIFF_BEGIN 271s > if (require(lwgeom, quietly = TRUE)) { 271s + x__ = st_transform_proj(x, st_crs(4326)$proj4string) 271s + st_crs(x_) = st_crs(x__) 271s + print(all.equal(x_,x__)) 271s + 271s 271s Attaching package: 'dplyr' 271s 271s The following objects are masked from 'package:stats': 271s 271s filter, lag 271s 271s The following objects are masked from 'package:base': 271s 271s intersect, setdiff, setequal, union 271s 271s Error in Ops.units(X[[i]], ...) : 271s both operands of the expression should be "units" objects 271s Error in Ops.units(X[[i]], ...) : 271s both operands of the expression should be "units" objects 271s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.13.0, PROJ 9.5.1 271s 271s Attaching package: 'lwgeom' 271s 271s The following object is masked from 'package:sf': 271s 271s st_perimeter 271s 271s Warning messages: 271s 1: In fun(libname, pkgname) : 271s GEOS versions differ: lwgeom has 3.13.0 sf has 3.14.1 271s 2: In fun(libname, pkgname) : 271s PROJ versions differ: lwgeom has 9.5.1 sf has 9.7.0 271s Error in st_transform.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 271s !is.na(st_crs(x)) is not TRUE 271s Error in st_transform_proj.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 271s !is.na(st_crs(x)) is not TRUE 271s + # x__ = st_transform(x, x_) #now in st_warp 271s + # all.equal(x_, x__) 271s + 271s + x = st_xy2sfc(x, as_points = FALSE) 271s + (x_ = st_transform(x, st_crs(4326))) 271s + (x__ = st_transform_proj(x, st_crs(4326))) 271s + print(all.equal(x_,x__,check.attributes = FALSE)) 271s + } 271s [1] TRUE 271s [1] TRUE 271s > ## IGNORE_RDIFF_END 271s > 271s > # nothing to transform: now errs: 271s > try(st_transform(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 271s > try(st_transform_proj(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 271s > 271s BEGIN TEST warp.R 271s 271s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 271s Copyright (C) 2025 The R Foundation for Statistical Computing 271s Platform: aarch64-unknown-linux-gnu 271s 271s R is free software and comes with ABSOLUTELY NO WARRANTY. 271s You are welcome to redistribute it under certain conditions. 271s Type 'license()' or 'licence()' for distribution details. 271s 271s R is a collaborative project with many contributors. 271s Type 'contributors()' for more information and 271s 'citation()' on how to cite R or R packages in publications. 271s 271s Type 'demo()' for some demos, 'help()' for on-line help, or 271s 'help.start()' for an HTML browser interface to help. 271s Type 'q()' to quit R. 271s 271s > suppressPackageStartupMessages(library(stars)) 271s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 271s > x = read_stars(geomatrix) 271s > # can stars reproduce what gdal does, by default? 271s > x2 = st_warp(x, use_gdal = TRUE, no_data_value = -9999) 271s > y = st_warp(x, x2) 271s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE) } 271s > if (interactive()) { plot(y, breaks = "equal", axes=TRUE) } 271s > names(x2) = names(y) 271s > all.equal(x2, y) # yes? 271s [1] TRUE 271s > 271s > # does gdal reproduce with stars template object? 271s > (x2 = setNames(st_warp(x, y, use_gdal = TRUE, no_data_value=-1), "file.tif")) 271s stars object with 2 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 271s file.tif 74 115 123 126.4289 132 255 224 271s dimension(s): 271s from to offset delta refsys point x/y 271s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 271s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 271s > 271s > # does gdal reproduce what stars does, default cell size? 271s > (x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE)) 271s stars object with 2 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 271s geomatrix.tif 74 115 123 126.4289 132 255 224 271s dimension(s): 271s from to offset delta refsys x/y 271s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N [x] 271s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N [y] 271s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 271s stars object with 2 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 271s file.tif 74 115 123 126.4289 132 255 224 271s dimension(s): 271s from to offset delta refsys point x/y 271s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 271s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 271s > 271s > # try with multiple bands: 271s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 271s > (x1 = read_stars(tif)) 271s stars object with 3 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. 271s L7_ETMs.tif 1 54 69 68.91242 86 255 271s dimension(s): 271s from to offset delta refsys point x/y 271s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 271s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 271s band 1 6 NA NA NA NA 271s > tifcp = tempfile(fileext = ".tif") 271s > file.copy(tif, tifcp) 271s [1] TRUE 271s > x1p = read_stars(tifcp, proxy = TRUE) 271s > st_dimensions(x1p) 271s from to offset delta refsys point x/y 271s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 271s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 271s band 1 6 NA NA NA NA 271s > (x1a = st_warp(x1, crs = st_crs(4326))) 271s stars object with 3 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 271s L7_ETMs.tif 1 54 69 68.93072 86 255 8778 271s dimension(s): 271s from to offset delta refsys x/y 271s x 1 350 -34.92 0.0002592 WGS 84 [x] 271s y 1 352 -7.95 -0.0002592 WGS 84 [y] 271s band 1 6 NA NA NA 271s > (x1b = setNames(st_warp(x1, x1p, use_gdal = TRUE, no_data_value=-1), "file.tif")) 271s stars object with 3 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. 271s file.tif 1 54 69 68.91242 86 255 271s dimension(s): 271s from to offset delta refsys point x/y 271s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 271s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 271s band 1 6 NA NA NA NA 271s > 271s > # does gdal reproduce what stars does? Smaller grid: 271s > x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE, cellsize = 3) 271s > # x2 = x2[,2:43,2:43] 271s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE, reset = FALSE) } 271s > if (interactive()) { plot(st_as_sfc(st_bbox(x2)), add = TRUE, col = NA, border = 'red') } 271s > ### doesn't work: FIXME: check with more recent GDAL: 271s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 271s stars object with 2 dimensions and 1 attribute 271s attribute(s): 271s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 272s file.tif 74 107 123 126.6584 132 255 727 272s dimension(s): 272s from to offset delta refsys point x/y 272s x 1 44 1840902 3 WGS 84 / UTM zone 11N FALSE [x] 272s y 1 44 1144003 -3 WGS 84 / UTM zone 11N FALSE [y] 272s > if (interactive()) { plot(y, breaks = "equal") } 272s > names(x2) = names(y) 272s > # isTRUE(all.equal(x2, y, check.attributes=FALSE)) 272s > m = mean(as.vector(x2[[1]]==y[[1]]), na.rm = TRUE) 272s > u = unique(as.vector(x2[[1]]-y[[1]])) 272s > 272s > g = st_as_stars() 272s > attr(g, "dimensions")$x$offset = 0 272s > g$values = as.vector(t(matrix(seq_len(prod(dim(g))), 180, 360))) 272s > if (interactive()) { plot(g, axes=TRUE) } 272s > a = st_warp(g, st_as_stars(), use_gdal=FALSE) 272s > b = st_warp(g, st_as_stars(), use_gdal=TRUE, no_data_value = -1) 272s > all.equal(a, b, check.attributes = FALSE) 272s [1] TRUE 272s > 272s BEGIN TEST write.R 272s 272s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 272s Copyright (C) 2025 The R Foundation for Statistical Computing 272s Platform: aarch64-unknown-linux-gnu 272s 272s R is free software and comes with ABSOLUTELY NO WARRANTY. 272s You are welcome to redistribute it under certain conditions. 272s Type 'license()' or 'licence()' for distribution details. 272s 272s R is a collaborative project with many contributors. 272s Type 'contributors()' for more information and 272s 'citation()' on how to cite R or R packages in publications. 272s 272s Type 'demo()' for some demos, 'help()' for on-line help, or 272s 'help.start()' for an HTML browser interface to help. 272s Type 'q()' to quit R. 272s 272s > suppressPackageStartupMessages(library(stars)) 272s > 272s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 272s > (x = read_stars(tif)) 272s stars object with 3 dimensions and 1 attribute 272s attribute(s): 272s Min. 1st Qu. Median Mean 3rd Qu. Max. 272s L7_ETMs.tif 1 54 69 68.91242 86 255 272s dimension(s): 272s from to offset delta refsys point x/y 272s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 272s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 272s band 1 6 NA NA NA NA 272s > 272s > # write stars object: 272s > write_stars(x, tempfile(), driver = "GTiff") 272s > 272s > # write stars_proxy object: 272s > (x = read_stars(tif, proxy = TRUE)) 272s stars_proxy object with 1 attribute in 1 file(s): 272s $L7_ETMs.tif 272s [1] "[...]/L7_ETMs.tif" 272s 272s dimension(s): 272s from to offset delta refsys point x/y 272s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 272s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 272s band 1 6 NA NA NA NA 272s > write_stars(x, tempfile(), driver = "GTiff") 272s 272s > 272s autopkgtest [17:56:08]: test run-unit-test: -----------------------] 274s run-unit-test PASS 274s autopkgtest [17:56:10]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 274s autopkgtest [17:56:10]: test pkg-r-autopkgtest: preparing testbed 295s Creating nova instance adt-resolute-arm64-r-cran-stars-20260129-175136-juju-7f2275-prod-proposed-migration-environment-20-6297ae51-d263-4146-ba71-155789ac18ce from image adt/ubuntu-resolute-arm64-server-20260128.img (UUID 10e9cd8e-6c32-4761-bbae-8581f2bd4c6f)... 357s autopkgtest [17:57:33]: testbed dpkg architecture: arm64 357s autopkgtest [17:57:33]: testbed apt version: 3.1.14 357s autopkgtest [17:57:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 357s autopkgtest [17:57:33]: testbed release detected to be: resolute 358s autopkgtest [17:57:34]: updating testbed package index (apt update) 358s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 358s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 358s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 359s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 359s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [25.4 kB] 359s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2820 B] 359s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [106 kB] 359s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1073 kB] 359s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [125 kB] 359s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [4268 B] 359s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [12.3 kB] 359s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [328 B] 359s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [858 kB] 359s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [21.9 kB] 359s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [19.4 kB] 359s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [576 B] 362s Fetched 2374 kB in 1s (3360 kB/s) 362s Reading package lists... 363s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 363s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 363s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 363s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 364s Reading package lists... 364s Reading package lists... 364s Building dependency tree... 364s Reading state information... 365s Calculating upgrade... 365s The following packages will be upgraded: 365s libsgutils2-1.48 liburcu8t64 libxcb1 sg3-utils sg3-utils-udev tzdata 365s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 365s Need to get 1437 kB of archives. 365s After this operation, 64.5 kB disk space will be freed. 365s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 tzdata all 2025c-3ubuntu3 [199 kB] 365s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 liburcu8t64 arm64 0.15.6-1 [64.8 kB] 365s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb1 arm64 1.17.0-2ubuntu1 [49.2 kB] 365s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libsgutils2-1.48 arm64 1.48-3ubuntu2 [116 kB] 365s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 sg3-utils arm64 1.48-3ubuntu2 [1001 kB] 365s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 sg3-utils-udev all 1.48-3ubuntu2 [6610 B] 365s dpkg-preconfigure: unable to re-open stdin: No such file or directory 366s Fetched 1437 kB in 0s (14.8 MB/s) 366s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 366s Preparing to unpack .../0-tzdata_2025c-3ubuntu3_all.deb ... 366s Unpacking tzdata (2025c-3ubuntu3) over (2025c-3ubuntu2) ... 366s Preparing to unpack .../1-liburcu8t64_0.15.6-1_arm64.deb ... 366s Unpacking liburcu8t64:arm64 (0.15.6-1) over (0.15.5-1) ... 366s Preparing to unpack .../2-libxcb1_1.17.0-2ubuntu1_arm64.deb ... 366s Unpacking libxcb1:arm64 (1.17.0-2ubuntu1) over (1.17.0-2build1) ... 366s Preparing to unpack .../3-libsgutils2-1.48_1.48-3ubuntu2_arm64.deb ... 366s Unpacking libsgutils2-1.48:arm64 (1.48-3ubuntu2) over (1.48-3ubuntu1) ... 366s Preparing to unpack .../4-sg3-utils_1.48-3ubuntu2_arm64.deb ... 366s Unpacking sg3-utils (1.48-3ubuntu2) over (1.48-3ubuntu1) ... 367s Preparing to unpack .../5-sg3-utils-udev_1.48-3ubuntu2_all.deb ... 367s Unpacking sg3-utils-udev (1.48-3ubuntu2) over (1.48-3ubuntu1) ... 367s Setting up liburcu8t64:arm64 (0.15.6-1) ... 367s Setting up libxcb1:arm64 (1.17.0-2ubuntu1) ... 367s Setting up libsgutils2-1.48:arm64 (1.48-3ubuntu2) ... 367s Setting up tzdata (2025c-3ubuntu3) ... 367s 367s Current default time zone: 'Etc/UTC' 367s Local time is now: Thu Jan 29 17:57:43 UTC 2026. 367s Universal Time is now: Thu Jan 29 17:57:43 UTC 2026. 367s Run 'dpkg-reconfigure tzdata' if you wish to change it. 367s 367s Setting up sg3-utils (1.48-3ubuntu2) ... 367s Setting up sg3-utils-udev (1.48-3ubuntu2) ... 367s update-initramfs: deferring update (trigger activated) 367s Processing triggers for libc-bin (2.42-2ubuntu4) ... 367s Processing triggers for man-db (2.13.1-1) ... 368s Processing triggers for initramfs-tools (0.150ubuntu7) ... 368s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 386s System running in EFI mode, skipping. 386s autopkgtest [17:58:02]: upgrading testbed (apt dist-upgrade and autopurge) 387s Reading package lists... 387s Building dependency tree... 387s Reading state information... 387s Calculating upgrade... 387s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 388s Reading package lists... 388s Building dependency tree... 388s Reading state information... 388s Solving dependencies... 388s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 389s autopkgtest [17:58:05]: rebooting testbed after setup commands that affected boot 430s Reading package lists... 430s Building dependency tree... 430s Reading state information... 430s Solving dependencies... 431s The following NEW packages will be installed: 431s build-essential cpp cpp-15 cpp-15-aarch64-linux-gnu cpp-aarch64-linux-gnu 431s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 431s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15 431s g++-15-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-15 431s gcc-15-aarch64-linux-gnu gcc-aarch64-linux-gnu gdal-data gdal-plugins 431s gfortran gfortran-15 gfortran-15-aarch64-linux-gnu 431s gfortran-aarch64-linux-gnu icu-devtools javascript-common libabsl20260107 431s libaec0 libaom3 libarmadillo15 libarpack2t64 libasan8 libavif16 libblas-dev 431s libblas3 libblosc1 libbz2-dev libcairo2 libcc1-0 libcfitsio10t64 libdatrie1 431s libdav1d7 libde265-0 libdeflate-dev libdeflate0 libfontconfig1 libfreexl1 431s libfyba0t64 libgav1-2 libgcc-15-dev libgdal38 libgeos-c1t64 libgeos3.14.1 431s libgeotiff5 libgfortran-15-dev libgfortran5 libgif7 libgomp1 libgpgmepp6t64 431s libgraphite2-3 libharfbuzz0b libhdf4-0 libhdf5-310 libhdf5-hl-310 431s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libhwasan0 libhwy1t64 431s libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 431s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 431s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 431s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 431s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 431s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 431s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3 431s liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64 431s libmpc3 libmuparser2v5 libmysqlclient24 libncurses-dev libnetcdf22 libodbc2 431s libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 431s libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 431s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 431s libpoppler147 libpq5 libproj25 libqhull-r8.0 libreadline-dev librttopo1 431s libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64 libstdc++-15-dev 431s libsuperlu7 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 431s libtk8.6 libtsan2 libubsan1 libudunits2-0 libudunits2-data liburiparser1 431s libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 431s libxss1 libxt6t64 libyuv0 libzstd-dev mysql-common node-bootstrap-sass 431s node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest 431s pkgconf pkgconf-bin proj-data r-base-core r-base-dev r-cran-abind 431s r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio 431s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-cftime 431s r-cran-class r-cran-classint r-cran-cli r-cran-clue r-cran-cluster 431s r-cran-codetools r-cran-collapse r-cran-commonmark r-cran-covr r-cran-cpp11 431s r-cran-crayon r-cran-curl r-cran-dbi r-cran-deldir r-cran-desc 431s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-evaluate 431s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fnn r-cran-fontawesome 431s r-cran-formula r-cran-fs r-cran-future r-cran-future.apply r-cran-generics 431s r-cran-ggforce r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue 431s r-cran-goftest r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools 431s r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib 431s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later 431s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv 431s r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata 431s r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise 431s r-cran-mgcv r-cran-mime r-cran-misctools r-cran-ncdfgeom r-cran-ncmeta 431s r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict 431s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 431s r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx 431s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6 431s r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils 431s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex 431s r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot 431s r-cran-s2 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-shiny 431s r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 431s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 431s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 431s r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils 431s r-cran-stars r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 431s r-cran-systemfonts r-cran-tensor r-cran-terra r-cran-testthat r-cran-tibble 431s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tweenr r-cran-units 431s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-waldo 431s r-cran-withr r-cran-wk r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml 431s r-cran-zoo unixodbc-common unzip x11-common xdg-utils zip zlib1g-dev 431s 0 upgraded, 343 newly installed, 0 to remove and 0 not upgraded. 431s Need to get 388 MB of archives. 431s After this operation, 1141 MB of additional disk space will be used. 431s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1build1 [676 kB] 431s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-2 [55.6 kB] 432s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-11ubuntu1 [11.7 MB] 432s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-11ubuntu1 [1030 B] 432s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 432s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 432s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-11ubuntu1 [49.0 kB] 432s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-11ubuntu1 [147 kB] 432s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-11ubuntu1 [28.0 kB] 432s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-11ubuntu1 [2920 kB] 432s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-11ubuntu1 [1316 kB] 432s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-11ubuntu1 [2690 kB] 432s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-11ubuntu1 [1176 kB] 432s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-11ubuntu1 [1638 kB] 432s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-11ubuntu1 [2600 kB] 432s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-11ubuntu1 [23.1 MB] 433s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-11ubuntu1 [517 kB] 433s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 433s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 433s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-11ubuntu1 [2547 kB] 433s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-11ubuntu1 [13.2 MB] 433s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-11ubuntu1 [24.6 kB] 433s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 433s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 433s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu2 [5254 B] 433s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 dctrl-tools arm64 2.24-3build4 [102 kB] 433s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 433s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 433s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 433s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 433s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 433s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 433s Get:33 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 433s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 434s Get:35 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-data all 3.12.1+dfsg-1 [278 kB] 434s Get:36 http://ftpmaster.internal/ubuntu resolute/universe arm64 gdal-plugins arm64 3.12.1+dfsg-1 [26.8 kB] 434s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-11ubuntu1 [450 kB] 434s Get:38 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran-15-dev arm64 15.2.0-11ubuntu1 [489 kB] 434s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-11ubuntu1 [12.5 MB] 434s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15 arm64 15.2.0-11ubuntu1 [17.9 kB] 434s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1022 B] 434s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran arm64 4:15.2.0-4ubuntu1 [1160 B] 434s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 icu-devtools arm64 78.2-1ubuntu1 [207 kB] 434s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1 [4828 B] 434s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 libabsl20260107 arm64 20260107.0-0ubuntu2 [563 kB] 434s Get:46 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.5-1 [21.8 kB] 434s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 libaom3 arm64 3.13.1-2 [1773 kB] 434s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 434s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 434s Get:50 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarpack2t64 arm64 3.9.1-6 [94.9 kB] 434s Get:51 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsuperlu7 arm64 7.0.1+dfsg1-2 [171 kB] 434s Get:52 http://ftpmaster.internal/ubuntu resolute/universe arm64 libarmadillo15 arm64 1:15.2.1+dfsg-2 [108 kB] 434s Get:53 http://ftpmaster.internal/ubuntu resolute/universe arm64 libdav1d7 arm64 1.5.3-1 [297 kB] 434s Get:54 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgav1-2 arm64 0.20.0-2build1 [547 kB] 434s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB] 434s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 434s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libyuv0 arm64 0.0.1922.20260106-1 [160 kB] 434s Get:58 http://ftpmaster.internal/ubuntu resolute/universe arm64 libavif16 arm64 1.3.0-1ubuntu3 [112 kB] 434s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas-dev arm64 3.12.1-7ubuntu1 [160 kB] 434s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libsnappy1v5 arm64 1.2.2-2 [30.1 kB] 434s Get:61 http://ftpmaster.internal/ubuntu resolute/universe arm64 libblosc1 arm64 1.21.5+ds-2 [25.9 kB] 434s Get:62 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-dev arm64 1.0.8-6build1 [36.2 kB] 434s Get:63 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 434s Get:64 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 434s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 434s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 434s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 434s Get:68 http://ftpmaster.internal/ubuntu resolute/universe arm64 libcfitsio10t64 arm64 4.6.3-1 [517 kB] 434s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 434s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libde265-0 arm64 1.0.16-1build1 [148 kB] 434s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 434s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate-dev arm64 1.23-2 [53.6 kB] 434s Get:73 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfyba0t64 arm64 4.1.1-11build2 [119 kB] 434s Get:74 http://ftpmaster.internal/ubuntu resolute/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [24.4 kB] 434s Get:75 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfreexl1 arm64 2.0.0-1build3 [42.4 kB] 434s Get:76 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos3.14.1 arm64 3.14.1-2 [935 kB] 434s Get:77 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeos-c1t64 arm64 3.14.1-2 [110 kB] 434s Get:78 http://ftpmaster.internal/ubuntu resolute/universe arm64 proj-data all 9.7.1-1 [7950 kB] 434s Get:79 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 434s Get:80 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 434s Get:81 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 434s Get:82 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 434s Get:83 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 434s Get:84 http://ftpmaster.internal/ubuntu resolute/universe arm64 libproj25 arm64 9.7.1-1 [1370 kB] 434s Get:85 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgeotiff5 arm64 1.7.4-1 [58.9 kB] 434s Get:86 http://ftpmaster.internal/ubuntu resolute/main arm64 libgif7 arm64 5.2.2-1ubuntu3 [35.8 kB] 434s Get:87 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.5-1 [17.0 kB] 434s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf4-0 arm64 4.3.1-2 [304 kB] 434s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.6+repack-2 [1287 kB] 435s Get:90 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-aomdec arm64 1.21.2-1 [13.9 kB] 435s Get:91 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif-plugin-libde265 arm64 1.21.2-1 [9696 B] 435s Get:92 http://ftpmaster.internal/ubuntu resolute/main arm64 libheif1 arm64 1.21.2-1 [502 kB] 435s Get:93 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwy1t64 arm64 1.3.0-2 [513 kB] 435s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 liblcms2-2 arm64 2.17-1 [170 kB] 435s Get:95 http://ftpmaster.internal/ubuntu resolute/main arm64 libjxl0.11 arm64 0.11.1-6ubuntu1 [909 kB] 435s Get:96 http://ftpmaster.internal/ubuntu resolute/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB] 435s Get:97 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlbase1t64 arm64 1.3.0-13 [48.2 kB] 435s Get:98 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmldom1t64 arm64 1.3.0-13 [143 kB] 435s Get:99 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkmlengine1t64 arm64 1.3.0-13 [68.9 kB] 435s Get:100 http://ftpmaster.internal/ubuntu resolute/universe arm64 libmuparser2v5 arm64 2.3.4-2 [129 kB] 435s Get:101 http://ftpmaster.internal/ubuntu resolute/main arm64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 435s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 libmysqlclient24 arm64 8.4.8-0ubuntu1 [1244 kB] 435s Get:103 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-310 arm64 1.14.6+repack-2 [59.1 kB] 435s Get:104 http://ftpmaster.internal/ubuntu resolute/universe arm64 libnetcdf22 arm64 1:4.9.3-1build1 [555 kB] 435s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libltdl7 arm64 2.5.4-9 [43.3 kB] 435s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbc2 arm64 2.3.14-1 [143 kB] 435s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 unixodbc-common all 2.3.14-1 [8792 B] 435s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libodbcinst2 arm64 2.3.14-1 [30.6 kB] 435s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 libopenjp2-7 arm64 2.5.4-1 [180 kB] 435s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libgpgmepp6t64 arm64 1.24.2-3ubuntu2 [117 kB] 435s Get:111 http://ftpmaster.internal/ubuntu resolute/main arm64 libpoppler147 arm64 25.03.0-11.1 [1149 kB] 435s Get:112 http://ftpmaster.internal/ubuntu resolute/main arm64 libpq5 arm64 18.1-2 [151 kB] 435s Get:113 http://ftpmaster.internal/ubuntu resolute/universe arm64 libqhull-r8.0 arm64 2020.2-8 [191 kB] 435s Get:114 http://ftpmaster.internal/ubuntu resolute/universe arm64 librttopo1 arm64 1.1.0-4 [190 kB] 435s Get:115 http://ftpmaster.internal/ubuntu resolute/universe arm64 libspatialite8t64 arm64 5.1.0-3ubuntu1 [1816 kB] 435s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build2 [913 kB] 435s Get:117 http://ftpmaster.internal/ubuntu resolute/universe arm64 libgdal38 arm64 3.12.1+dfsg-1 [10.4 MB] 435s Get:118 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 435s Get:119 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.1-1 [510 kB] 435s Get:120 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 435s Get:121 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 435s Get:122 http://ftpmaster.internal/ubuntu resolute/main arm64 libicu-dev arm64 78.2-1ubuntu1 [12.5 MB] 436s Get:123 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu2 [306 kB] 436s Get:124 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 436s Get:125 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 436s Get:126 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 436s Get:127 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 436s Get:128 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 436s Get:129 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 436s Get:130 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 436s Get:131 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 436s Get:132 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 436s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 436s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 436s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 436s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 436s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 436s Get:138 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 436s Get:139 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-2 [41.3 kB] 436s Get:140 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack-dev arm64 3.12.1-7ubuntu1 [4456 kB] 436s Get:141 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 436s Get:142 http://ftpmaster.internal/ubuntu resolute/main arm64 libncurses-dev arm64 6.6+20251231-1 [391 kB] 436s Get:143 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 436s Get:144 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 436s Get:145 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 436s Get:146 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 436s Get:147 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 436s Get:148 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 436s Get:149 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 436s Get:150 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-16-0 arm64 10.46-1 [225 kB] 436s Get:151 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-32-0 arm64 10.46-1 [213 kB] 436s Get:152 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-posix3 arm64 10.46-1 [7300 B] 436s Get:153 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-dev arm64 10.46-1 [772 kB] 436s Get:154 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 436s Get:155 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 436s Get:156 http://ftpmaster.internal/ubuntu resolute/main arm64 libpng-dev arm64 1.6.54-1 [268 kB] 436s Get:157 http://ftpmaster.internal/ubuntu resolute/main arm64 libreadline-dev arm64 8.3-3 [199 kB] 436s Get:158 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB] 436s Get:159 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [1024 kB] 436s Get:160 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 436s Get:161 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 436s Get:162 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 436s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-data all 2.2.28-8 [19.3 kB] 436s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 libudunits2-0 arm64 2.2.28-8 [53.0 kB] 436s Get:165 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 436s Get:166 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-2 [349 kB] 436s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 436s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 436s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 436s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 436s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 438s Get:172 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu2 [175 kB] 438s Get:173 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 438s Get:174 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 438s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 439s Get:176 http://ftpmaster.internal/ubuntu resolute/main arm64 liblzma-dev arm64 5.8.2-2 [180 kB] 439s Get:177 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 439s Get:178 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 439s Get:179 http://ftpmaster.internal/ubuntu resolute/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 439s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 439s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 pkg-r-autopkgtest all 20250812 [6158 B] 439s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 439s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 439s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 439s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 439s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 439s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 439s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 439s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 439s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 439s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 439s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 439s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 439s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 439s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 439s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 440s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 440s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 440s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 440s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB] 440s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB] 440s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB] 440s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-e1071 arm64 1.7-17-1 [576 kB] 440s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-kernsmooth arm64 2.23-26-1build1 [93.6 kB] 440s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-classint arm64 0.4-11+dfsg-1 [108 kB] 440s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1build1 [855 kB] 440s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.21-2 [83.6 kB] 440s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 440s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 440s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-wk arm64 0.9.4-1 [1790 kB] 440s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s2 arm64 1.1.9-1build1 [1766 kB] 440s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-units arm64 0.8-7+dfsg-2 [289 kB] 440s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sf arm64 1.0-19+dfsg-2build2 [3240 kB] 440s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 440s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 440s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 440s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 440s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB] 440s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 440s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 440s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 440s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 440s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 440s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 440s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 440s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 440s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 440s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 440s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 440s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 440s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 441s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cairo arm64 1.6-2-1 [89.0 kB] 441s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 441s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 441s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 441s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cftime all 1.7.2-1 [918 kB] 441s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cluster arm64 2.1.8.1-1 [569 kB] 441s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clue arm64 0.3-66-1 [967 kB] 441s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 441s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-collapse arm64 2.1.0-1 [3304 kB] 441s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 441s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 441s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rex all 1.2.1-1build1 [126 kB] 441s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 441s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 441s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 441s Get:247 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 441s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 441s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 441s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 441s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 441s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 441s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1build1 [1154 kB] 441s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 441s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 441s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fnn arm64 1.1.4.1-1 [125 kB] 441s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 441s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 441s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-globals all 0.18.0-1 [158 kB] 441s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 441s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-parallelly arm64 1.42.0-1 [540 kB] 441s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 441s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 441s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 441s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 441s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 442s Get:267 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB] 442s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 442s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mgcv arm64 1.9-4-1 [3546 kB] 442s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 442s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 442s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 442s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 442s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 442s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tweenr arm64 2.0.3-1 [404 kB] 442s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-polyclip arm64 1.10-7-1 [113 kB] 442s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-systemfonts arm64 1.2.1-1 [302 kB] 442s Get:278 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 443s Get:279 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggforce arm64 0.4.2-1 [1778 kB] 443s Get:280 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 443s Get:281 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 443s Get:282 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggthemes all 5.2.0-1 [760 kB] 443s Get:283 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-goftest arm64 1.2-3-1build1 [61.3 kB] 443s Get:284 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gridextra all 2.3-3build2 [1032 kB] 443s Get:285 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 443s Get:286 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 443s Get:287 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 443s Get:288 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 443s Get:289 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 443s Get:290 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-intervals arm64 0.15.5-1 [602 kB] 443s Get:291 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 443s Get:292 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 443s Get:293 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-zoo arm64 1.8-15-1 [1025 kB] 443s Get:294 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lmtest arm64 0.9.40-1build1 [400 kB] 443s Get:295 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lwgeom arm64 0.2-14-1 [394 kB] 444s Get:296 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maps arm64 3.4.2.1-1 [2350 kB] 444s Get:297 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mapdata arm64 2.3.1-1 [23.5 MB] 445s Get:298 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-misctools all 0.6-28-1 [99.9 kB] 445s Get:299 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB] 445s Get:300 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-maxlik all 1.5-2.2-1 [1115 kB] 445s Get:301 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rnetcdf arm64 2.9-2-1 [236 kB] 445s Get:302 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 445s Get:303 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncmeta all 0.4.0-1 [362 kB] 445s Get:304 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stars all 0.6-8-1 [4414 kB] 445s Get:305 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 445s Get:306 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 446s Get:307 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pcict arm64 0.5-4.4-1 [94.0 kB] 446s Get:308 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 446s Get:309 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.1.1-1 [131 kB] 446s Get:310 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.1-1 [252 kB] 446s Get:311 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB] 446s Get:312 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rdpack all 2.6.3-1 [636 kB] 446s Get:313 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plm all 2.6-7-1 [1823 kB] 446s Get:314 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 446s Get:315 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-randomforest arm64 4.7-1.2-1 [216 kB] 446s Get:316 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sp arm64 1:2.2-0+dfsg-1 [1443 kB] 447s Get:317 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-terra arm64 1.8-70-1build2 [4198 kB] 447s Get:318 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-raster arm64 3.6-32-1 [3161 kB] 447s Get:319 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 447s Get:320 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 447s Get:321 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 447s Get:322 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 447s Get:323 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 447s Get:324 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 448s Get:325 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 448s Get:326 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 448s Get:327 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB] 448s Get:328 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xts arm64 0.14.1-1 [1189 kB] 448s Get:329 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spacetime all 1.3-3-2 [2780 kB] 448s Get:330 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.utils arm64 3.1-3-1 [386 kB] 448s Get:331 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.data all 3.1-6-1 [4153 kB] 448s Get:332 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.univar arm64 3.1-2-1 [314 kB] 448s Get:333 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.geom arm64 3.3-6-1 [3941 kB] 448s Get:334 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.random arm64 3.3-3-1 [1163 kB] 448s Get:335 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tensor all 1.5-4build1 [16.3 kB] 449s Get:336 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.sparse arm64 3.1-0-1 [218 kB] 449s Get:337 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.explore arm64 3.3-4-1 [3272 kB] 449s Get:338 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.model arm64 3.3-4-1 [3398 kB] 449s Get:339 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat.linnet arm64 3.2-5-1 [1507 kB] 449s Get:340 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-spatstat arm64 3.3-1-1 [4120 kB] 449s Get:341 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.2-1 [153 kB] 449s Get:342 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 449s Get:343 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 450s Preconfiguring packages ... 450s Fetched 388 MB in 18s (21.0 MB/s) 451s Selecting previously unselected package libisl23:arm64. 451s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 135255 files and directories currently installed.) 451s Preparing to unpack .../000-libisl23_0.27-1build1_arm64.deb ... 451s Unpacking libisl23:arm64 (0.27-1build1) ... 451s Selecting previously unselected package libmpc3:arm64. 451s Preparing to unpack .../001-libmpc3_1.3.1-2_arm64.deb ... 451s Unpacking libmpc3:arm64 (1.3.1-2) ... 451s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 451s Preparing to unpack .../002-cpp-15-aarch64-linux-gnu_15.2.0-11ubuntu1_arm64.deb ... 451s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-11ubuntu1) ... 451s Selecting previously unselected package cpp-15. 451s Preparing to unpack .../003-cpp-15_15.2.0-11ubuntu1_arm64.deb ... 451s Unpacking cpp-15 (15.2.0-11ubuntu1) ... 451s Selecting previously unselected package cpp-aarch64-linux-gnu. 451s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 451s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 451s Selecting previously unselected package cpp. 451s Preparing to unpack .../005-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 451s Unpacking cpp (4:15.2.0-4ubuntu1) ... 451s Selecting previously unselected package libcc1-0:arm64. 451s Preparing to unpack .../006-libcc1-0_15.2.0-11ubuntu1_arm64.deb ... 451s Unpacking libcc1-0:arm64 (15.2.0-11ubuntu1) ... 451s Selecting previously unselected package libgomp1:arm64. 451s Preparing to unpack .../007-libgomp1_15.2.0-11ubuntu1_arm64.deb ... 451s Unpacking libgomp1:arm64 (15.2.0-11ubuntu1) ... 451s Selecting previously unselected package libitm1:arm64. 451s Preparing to unpack .../008-libitm1_15.2.0-11ubuntu1_arm64.deb ... 451s Unpacking libitm1:arm64 (15.2.0-11ubuntu1) ... 451s Selecting previously unselected package libasan8:arm64. 451s Preparing to unpack .../009-libasan8_15.2.0-11ubuntu1_arm64.deb ... 451s Unpacking libasan8:arm64 (15.2.0-11ubuntu1) ... 451s Selecting previously unselected package liblsan0:arm64. 451s Preparing to unpack .../010-liblsan0_15.2.0-11ubuntu1_arm64.deb ... 451s Unpacking liblsan0:arm64 (15.2.0-11ubuntu1) ... 452s Selecting previously unselected package libtsan2:arm64. 452s Preparing to unpack .../011-libtsan2_15.2.0-11ubuntu1_arm64.deb ... 452s Unpacking libtsan2:arm64 (15.2.0-11ubuntu1) ... 452s Selecting previously unselected package libubsan1:arm64. 452s Preparing to unpack .../012-libubsan1_15.2.0-11ubuntu1_arm64.deb ... 452s Unpacking libubsan1:arm64 (15.2.0-11ubuntu1) ... 452s Selecting previously unselected package libhwasan0:arm64. 452s Preparing to unpack .../013-libhwasan0_15.2.0-11ubuntu1_arm64.deb ... 452s Unpacking libhwasan0:arm64 (15.2.0-11ubuntu1) ... 452s Selecting previously unselected package libgcc-15-dev:arm64. 452s Preparing to unpack .../014-libgcc-15-dev_15.2.0-11ubuntu1_arm64.deb ... 452s Unpacking libgcc-15-dev:arm64 (15.2.0-11ubuntu1) ... 452s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 452s Preparing to unpack .../015-gcc-15-aarch64-linux-gnu_15.2.0-11ubuntu1_arm64.deb ... 452s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-11ubuntu1) ... 452s Selecting previously unselected package gcc-15. 452s Preparing to unpack .../016-gcc-15_15.2.0-11ubuntu1_arm64.deb ... 452s Unpacking gcc-15 (15.2.0-11ubuntu1) ... 452s Selecting previously unselected package gcc-aarch64-linux-gnu. 452s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 452s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 452s Selecting previously unselected package gcc. 452s Preparing to unpack .../018-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 452s Unpacking gcc (4:15.2.0-4ubuntu1) ... 452s Selecting previously unselected package libstdc++-15-dev:arm64. 453s Preparing to unpack .../019-libstdc++-15-dev_15.2.0-11ubuntu1_arm64.deb ... 453s Unpacking libstdc++-15-dev:arm64 (15.2.0-11ubuntu1) ... 453s Selecting previously unselected package g++-15-aarch64-linux-gnu. 453s Preparing to unpack .../020-g++-15-aarch64-linux-gnu_15.2.0-11ubuntu1_arm64.deb ... 453s Unpacking g++-15-aarch64-linux-gnu (15.2.0-11ubuntu1) ... 453s Selecting previously unselected package g++-15. 453s Preparing to unpack .../021-g++-15_15.2.0-11ubuntu1_arm64.deb ... 453s Unpacking g++-15 (15.2.0-11ubuntu1) ... 453s Selecting previously unselected package g++-aarch64-linux-gnu. 453s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 453s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 453s Selecting previously unselected package g++. 453s Preparing to unpack .../023-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 453s Unpacking g++ (4:15.2.0-4ubuntu1) ... 453s Selecting previously unselected package build-essential. 453s Preparing to unpack .../024-build-essential_12.12ubuntu2_arm64.deb ... 453s Unpacking build-essential (12.12ubuntu2) ... 453s Selecting previously unselected package dctrl-tools. 453s Preparing to unpack .../025-dctrl-tools_2.24-3build4_arm64.deb ... 453s Unpacking dctrl-tools (2.24-3build4) ... 453s Selecting previously unselected package fonts-dejavu-mono. 453s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8build1_all.deb ... 453s Unpacking fonts-dejavu-mono (2.37-8build1) ... 453s Selecting previously unselected package fonts-dejavu-core. 453s Preparing to unpack .../027-fonts-dejavu-core_2.37-8build1_all.deb ... 453s Unpacking fonts-dejavu-core (2.37-8build1) ... 453s Selecting previously unselected package fontconfig-config. 453s Preparing to unpack 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package fonts-mathjax. 454s Preparing to unpack .../033-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 454s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 454s Selecting previously unselected package gdal-data. 454s Preparing to unpack .../034-gdal-data_3.12.1+dfsg-1_all.deb ... 454s Unpacking gdal-data (3.12.1+dfsg-1) ... 454s Selecting previously unselected package gdal-plugins:arm64. 454s Preparing to unpack .../035-gdal-plugins_3.12.1+dfsg-1_arm64.deb ... 454s Unpacking gdal-plugins:arm64 (3.12.1+dfsg-1) ... 454s Selecting previously unselected package libgfortran5:arm64. 454s Preparing to unpack .../036-libgfortran5_15.2.0-11ubuntu1_arm64.deb ... 454s Unpacking libgfortran5:arm64 (15.2.0-11ubuntu1) ... 454s Selecting previously unselected package libgfortran-15-dev:arm64. 454s Preparing to unpack .../037-libgfortran-15-dev_15.2.0-11ubuntu1_arm64.deb ... 454s Unpacking libgfortran-15-dev:arm64 (15.2.0-11ubuntu1) ... 454s Selecting previously unselected package gfortran-15-aarch64-linux-gnu. 454s Preparing to unpack .../038-gfortran-15-aarch64-linux-gnu_15.2.0-11ubuntu1_arm64.deb ... 454s Unpacking gfortran-15-aarch64-linux-gnu (15.2.0-11ubuntu1) ... 455s Selecting previously unselected package gfortran-15. 455s Preparing to unpack .../039-gfortran-15_15.2.0-11ubuntu1_arm64.deb ... 455s Unpacking gfortran-15 (15.2.0-11ubuntu1) ... 455s Selecting previously unselected package gfortran-aarch64-linux-gnu. 455s Preparing to unpack .../040-gfortran-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 455s Unpacking gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 455s Selecting previously unselected package gfortran. 455s Preparing to unpack .../041-gfortran_4%3a15.2.0-4ubuntu1_arm64.deb ... 455s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 455s Selecting previously unselected package icu-devtools. 455s Preparing to unpack .../042-icu-devtools_78.2-1ubuntu1_arm64.deb ... 455s Unpacking icu-devtools (78.2-1ubuntu1) ... 455s Selecting previously unselected package javascript-common. 455s Preparing to unpack .../043-javascript-common_12+nmu1_all.deb ... 455s Unpacking javascript-common (12+nmu1) ... 455s Selecting previously unselected package libabsl20260107:arm64. 455s Preparing to unpack .../044-libabsl20260107_20260107.0-0ubuntu2_arm64.deb ... 455s Unpacking libabsl20260107:arm64 (20260107.0-0ubuntu2) ... 455s Selecting previously unselected package libaec0:arm64. 455s Preparing to unpack .../045-libaec0_1.1.5-1_arm64.deb ... 455s Unpacking libaec0:arm64 (1.1.5-1) ... 455s Selecting previously unselected package libaom3:arm64. 455s Preparing to unpack .../046-libaom3_3.13.1-2_arm64.deb ... 455s Unpacking libaom3:arm64 (3.13.1-2) ... 455s Selecting previously unselected package libblas3:arm64. 455s Preparing to unpack .../047-libblas3_3.12.1-7ubuntu1_arm64.deb ... 455s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 455s Selecting previously unselected package liblapack3:arm64. 455s Preparing to unpack .../048-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 455s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 455s Selecting previously unselected package libarpack2t64:arm64. 455s Preparing to unpack .../049-libarpack2t64_3.9.1-6_arm64.deb ... 455s Unpacking libarpack2t64:arm64 (3.9.1-6) ... 455s Selecting previously unselected package libsuperlu7:arm64. 455s Preparing to unpack .../050-libsuperlu7_7.0.1+dfsg1-2_arm64.deb ... 455s Unpacking libsuperlu7:arm64 (7.0.1+dfsg1-2) ... 455s Selecting previously unselected package libarmadillo15. 455s Preparing to unpack .../051-libarmadillo15_1%3a15.2.1+dfsg-2_arm64.deb ... 455s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 455s Selecting previously unselected package libdav1d7:arm64. 455s Preparing to unpack .../052-libdav1d7_1.5.3-1_arm64.deb ... 455s Unpacking libdav1d7:arm64 (1.5.3-1) ... 455s Selecting previously unselected package libgav1-2:arm64. 455s Preparing to unpack .../053-libgav1-2_0.20.0-2build1_arm64.deb ... 455s Unpacking libgav1-2:arm64 (0.20.0-2build1) ... 455s Selecting previously unselected package libjpeg-turbo8:arm64. 455s Preparing to unpack .../054-libjpeg-turbo8_2.1.5-4ubuntu2_arm64.deb ... 455s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 455s Selecting previously unselected package libjpeg8:arm64. 455s Preparing to unpack .../055-libjpeg8_8c-2ubuntu11_arm64.deb ... 455s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 455s Selecting previously unselected package libyuv0:arm64. 456s Preparing to unpack .../056-libyuv0_0.0.1922.20260106-1_arm64.deb ... 456s Unpacking libyuv0:arm64 (0.0.1922.20260106-1) ... 456s Selecting previously unselected package libavif16:arm64. 456s Preparing to unpack .../057-libavif16_1.3.0-1ubuntu3_arm64.deb ... 456s Unpacking libavif16:arm64 (1.3.0-1ubuntu3) ... 456s Selecting previously unselected package libblas-dev:arm64. 456s Preparing to unpack .../058-libblas-dev_3.12.1-7ubuntu1_arm64.deb ... 456s Unpacking libblas-dev:arm64 (3.12.1-7ubuntu1) ... 456s Selecting previously unselected package libsnappy1v5:arm64. 456s Preparing to unpack .../059-libsnappy1v5_1.2.2-2_arm64.deb ... 456s Unpacking libsnappy1v5:arm64 (1.2.2-2) ... 456s Selecting previously unselected package libblosc1:arm64. 456s Preparing to unpack .../060-libblosc1_1.21.5+ds-2_arm64.deb ... 456s Unpacking libblosc1:arm64 (1.21.5+ds-2) ... 456s Selecting previously unselected package libbz2-dev:arm64. 456s Preparing to unpack .../061-libbz2-dev_1.0.8-6build1_arm64.deb ... 456s Unpacking libbz2-dev:arm64 (1.0.8-6build1) ... 456s Selecting previously unselected package libpixman-1-0:arm64. 456s Preparing to unpack .../062-libpixman-1-0_0.46.4-1_arm64.deb ... 456s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 456s Selecting previously unselected package libxcb-render0:arm64. 456s Preparing to unpack .../063-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 456s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 456s Selecting previously unselected package libxcb-shm0:arm64. 456s Preparing to unpack .../064-libxcb-shm0_1.17.0-2ubuntu1_arm64.deb ... 456s Unpacking libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 456s Selecting previously unselected package libxrender1:arm64. 456s Preparing to unpack .../065-libxrender1_1%3a0.9.12-1_arm64.deb ... 456s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 456s Selecting previously unselected package libcairo2:arm64. 456s Preparing to unpack .../066-libcairo2_1.18.4-3_arm64.deb ... 456s Unpacking libcairo2:arm64 (1.18.4-3) ... 456s Selecting previously unselected package libcfitsio10t64:arm64. 456s Preparing to unpack .../067-libcfitsio10t64_4.6.3-1_arm64.deb ... 456s Unpacking libcfitsio10t64:arm64 (4.6.3-1) ... 456s Selecting previously unselected package libdatrie1:arm64. 456s Preparing to unpack .../068-libdatrie1_0.2.14-1_arm64.deb ... 456s Unpacking libdatrie1:arm64 (0.2.14-1) ... 456s Selecting previously unselected package libde265-0:arm64. 456s Preparing to unpack .../069-libde265-0_1.0.16-1build1_arm64.deb ... 456s Unpacking libde265-0:arm64 (1.0.16-1build1) ... 456s Selecting previously unselected package libdeflate0:arm64. 456s Preparing to unpack .../070-libdeflate0_1.23-2_arm64.deb ... 456s Unpacking libdeflate0:arm64 (1.23-2) ... 456s Selecting previously unselected package libdeflate-dev:arm64. 456s Preparing to unpack .../071-libdeflate-dev_1.23-2_arm64.deb ... 456s Unpacking libdeflate-dev:arm64 (1.23-2) ... 456s Selecting previously unselected package libfyba0t64:arm64. 456s Preparing to unpack .../072-libfyba0t64_4.1.1-11build2_arm64.deb ... 456s Unpacking libfyba0t64:arm64 (4.1.1-11build2) ... 456s Selecting previously unselected package libminizip1t64:arm64. 456s Preparing to unpack .../073-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 456s Unpacking libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 456s Selecting previously unselected package libfreexl1:arm64. 456s Preparing to unpack .../074-libfreexl1_2.0.0-1build3_arm64.deb ... 456s Unpacking libfreexl1:arm64 (2.0.0-1build3) ... 456s Selecting previously unselected package libgeos3.14.1:arm64. 456s Preparing to unpack .../075-libgeos3.14.1_3.14.1-2_arm64.deb ... 456s Unpacking libgeos3.14.1:arm64 (3.14.1-2) ... 456s Selecting previously unselected package libgeos-c1t64:arm64. 456s Preparing to unpack .../076-libgeos-c1t64_3.14.1-2_arm64.deb ... 456s Unpacking libgeos-c1t64:arm64 (3.14.1-2) ... 457s Selecting previously unselected package proj-data. 457s Preparing to unpack .../077-proj-data_9.7.1-1_all.deb ... 457s Unpacking proj-data (9.7.1-1) ... 457s Selecting previously unselected package libjbig0:arm64. 457s Preparing to unpack .../078-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 457s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 457s Selecting previously unselected package liblerc4:arm64. 457s Preparing to unpack .../079-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 457s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 457s Selecting previously unselected package libsharpyuv0:arm64. 457s Preparing to unpack .../080-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 457s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 457s Selecting previously unselected package libwebp7:arm64. 457s Preparing to unpack .../081-libwebp7_1.5.0-0.1build1_arm64.deb ... 457s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 457s Selecting previously unselected package libtiff6:arm64. 457s Preparing to unpack .../082-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 457s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 457s Selecting previously unselected package libproj25:arm64. 457s Preparing to unpack .../083-libproj25_9.7.1-1_arm64.deb ... 457s Unpacking libproj25:arm64 (9.7.1-1) ... 457s Selecting previously unselected package libgeotiff5:arm64. 457s Preparing to unpack .../084-libgeotiff5_1.7.4-1_arm64.deb ... 457s Unpacking libgeotiff5:arm64 (1.7.4-1) ... 457s Selecting previously unselected package libgif7:arm64. 457s Preparing to unpack .../085-libgif7_5.2.2-1ubuntu3_arm64.deb ... 457s Unpacking libgif7:arm64 (5.2.2-1ubuntu3) ... 457s Selecting previously unselected package libsz2:arm64. 457s Preparing to unpack .../086-libsz2_1.1.5-1_arm64.deb ... 457s Unpacking libsz2:arm64 (1.1.5-1) ... 457s Selecting previously unselected package libhdf4-0:arm64. 457s Preparing to unpack .../087-libhdf4-0_4.3.1-2_arm64.deb ... 457s Unpacking libhdf4-0:arm64 (4.3.1-2) ... 457s Selecting previously unselected package libhdf5-310:arm64. 457s Preparing to unpack .../088-libhdf5-310_1.14.6+repack-2_arm64.deb ... 457s Unpacking libhdf5-310:arm64 (1.14.6+repack-2) ... 457s Selecting previously unselected package libheif-plugin-aomdec:arm64. 457s Preparing to unpack .../089-libheif-plugin-aomdec_1.21.2-1_arm64.deb ... 457s Unpacking libheif-plugin-aomdec:arm64 (1.21.2-1) ... 457s Selecting previously unselected package libheif-plugin-libde265:arm64. 457s Preparing to unpack .../090-libheif-plugin-libde265_1.21.2-1_arm64.deb ... 457s Unpacking libheif-plugin-libde265:arm64 (1.21.2-1) ... 457s Selecting previously unselected package libheif1:arm64. 457s Preparing to unpack .../091-libheif1_1.21.2-1_arm64.deb ... 457s Unpacking libheif1:arm64 (1.21.2-1) ... 457s Selecting previously unselected package libhwy1t64:arm64. 457s Preparing to unpack .../092-libhwy1t64_1.3.0-2_arm64.deb ... 457s Unpacking libhwy1t64:arm64 (1.3.0-2) ... 457s Selecting previously unselected package liblcms2-2:arm64. 457s Preparing to unpack .../093-liblcms2-2_2.17-1_arm64.deb ... 457s Unpacking liblcms2-2:arm64 (2.17-1) ... 458s Selecting previously unselected package libjxl0.11:arm64. 458s Preparing to unpack .../094-libjxl0.11_0.11.1-6ubuntu1_arm64.deb ... 458s Unpacking libjxl0.11:arm64 (0.11.1-6ubuntu1) ... 458s Selecting previously unselected package liburiparser1:arm64. 458s Preparing to unpack .../095-liburiparser1_0.9.8+dfsg-2_arm64.deb ... 458s Unpacking liburiparser1:arm64 (0.9.8+dfsg-2) ... 458s Selecting previously unselected package libkmlbase1t64:arm64. 458s Preparing to unpack .../096-libkmlbase1t64_1.3.0-13_arm64.deb ... 458s Unpacking libkmlbase1t64:arm64 (1.3.0-13) ... 458s Selecting previously unselected package libkmldom1t64:arm64. 458s Preparing to unpack .../097-libkmldom1t64_1.3.0-13_arm64.deb ... 458s Unpacking libkmldom1t64:arm64 (1.3.0-13) ... 458s Selecting previously unselected package libkmlengine1t64:arm64. 458s Preparing to unpack .../098-libkmlengine1t64_1.3.0-13_arm64.deb ... 458s Unpacking libkmlengine1t64:arm64 (1.3.0-13) ... 458s Selecting previously unselected package libmuparser2v5:arm64. 458s Preparing to unpack .../099-libmuparser2v5_2.3.4-2_arm64.deb ... 458s Unpacking libmuparser2v5:arm64 (2.3.4-2) ... 458s Selecting previously unselected package mysql-common. 458s Preparing to unpack .../100-mysql-common_5.8+1.1.1ubuntu2_all.deb ... 458s Unpacking mysql-common (5.8+1.1.1ubuntu2) ... 458s Selecting previously unselected package libmysqlclient24:arm64. 458s Preparing to unpack .../101-libmysqlclient24_8.4.8-0ubuntu1_arm64.deb ... 458s Unpacking libmysqlclient24:arm64 (8.4.8-0ubuntu1) ... 458s Selecting previously unselected package libhdf5-hl-310:arm64. 458s Preparing to unpack .../102-libhdf5-hl-310_1.14.6+repack-2_arm64.deb ... 458s Unpacking libhdf5-hl-310:arm64 (1.14.6+repack-2) ... 458s Selecting previously unselected package libnetcdf22:arm64. 458s Preparing to unpack .../103-libnetcdf22_1%3a4.9.3-1build1_arm64.deb ... 458s Unpacking libnetcdf22:arm64 (1:4.9.3-1build1) ... 458s Selecting previously unselected package libltdl7:arm64. 458s Preparing to unpack .../104-libltdl7_2.5.4-9_arm64.deb ... 458s Unpacking libltdl7:arm64 (2.5.4-9) ... 458s Selecting previously unselected package libodbc2:arm64. 458s Preparing to unpack .../105-libodbc2_2.3.14-1_arm64.deb ... 458s Unpacking libodbc2:arm64 (2.3.14-1) ... 458s Selecting previously unselected package unixodbc-common. 458s Preparing to unpack .../106-unixodbc-common_2.3.14-1_all.deb ... 458s Unpacking unixodbc-common (2.3.14-1) ... 458s Selecting previously unselected package libodbcinst2:arm64. 458s Preparing to unpack .../107-libodbcinst2_2.3.14-1_arm64.deb ... 458s Unpacking libodbcinst2:arm64 (2.3.14-1) ... 458s Selecting previously unselected package libopenjp2-7:arm64. 458s Preparing to unpack .../108-libopenjp2-7_2.5.4-1_arm64.deb ... 458s Unpacking libopenjp2-7:arm64 (2.5.4-1) ... 458s Selecting previously unselected package libgpgmepp6t64:arm64. 458s Preparing to unpack .../109-libgpgmepp6t64_1.24.2-3ubuntu2_arm64.deb ... 458s Unpacking libgpgmepp6t64:arm64 (1.24.2-3ubuntu2) ... 458s Selecting previously unselected package libpoppler147:arm64. 458s Preparing to unpack .../110-libpoppler147_25.03.0-11.1_arm64.deb ... 458s Unpacking libpoppler147:arm64 (25.03.0-11.1) ... 458s Selecting previously unselected package libpq5:arm64. 458s Preparing to unpack .../111-libpq5_18.1-2_arm64.deb ... 458s Unpacking libpq5:arm64 (18.1-2) ... 458s Selecting previously unselected package libqhull-r8.0:arm64. 458s Preparing to unpack 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460s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu2) ... 460s Selecting previously unselected package libjpeg8-dev:arm64. 460s Preparing to unpack .../123-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 460s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 460s Selecting previously unselected package libjpeg-dev:arm64. 460s Preparing to unpack .../124-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 460s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 460s Selecting previously unselected package libjs-bootstrap. 460s Preparing to unpack .../125-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 460s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 460s Selecting previously unselected package libjs-popper.js. 460s Preparing to unpack .../126-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 460s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 460s Selecting previously unselected package libjs-bootstrap4. 460s Preparing to unpack .../127-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 460s Unpacking libjs-bootstrap4 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460s Selecting previously unselected package libjs-prettify. 460s Preparing to unpack .../138-libjs-prettify_2015.12.04+dfsg-2_all.deb ... 460s Unpacking libjs-prettify (2015.12.04+dfsg-2) ... 460s Selecting previously unselected package liblapack-dev:arm64. 460s Preparing to unpack .../139-liblapack-dev_3.12.1-7ubuntu1_arm64.deb ... 460s Unpacking liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 461s Selecting previously unselected package liblua5.4-0:arm64. 461s Preparing to unpack .../140-liblua5.4-0_5.4.8-1_arm64.deb ... 461s Unpacking liblua5.4-0:arm64 (5.4.8-1) ... 461s Selecting previously unselected package libncurses-dev:arm64. 461s Preparing to unpack .../141-libncurses-dev_6.6+20251231-1_arm64.deb ... 461s Unpacking libncurses-dev:arm64 (6.6+20251231-1) ... 461s Selecting previously unselected package libthai-data. 461s Preparing to unpack .../142-libthai-data_0.1.30-1_all.deb ... 461s Unpacking libthai-data (0.1.30-1) ... 461s Selecting previously unselected package libthai0:arm64. 461s Preparing to unpack .../143-libthai0_0.1.30-1_arm64.deb ... 461s Unpacking libthai0:arm64 (0.1.30-1) ... 461s Selecting previously unselected package libpango-1.0-0:arm64. 461s Preparing to unpack .../144-libpango-1.0-0_1.57.0-1_arm64.deb ... 461s Unpacking libpango-1.0-0:arm64 (1.57.0-1) ... 461s Selecting previously unselected package libpangoft2-1.0-0:arm64. 461s Preparing to unpack .../145-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 461s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 461s Selecting previously unselected package libpangocairo-1.0-0:arm64. 461s Preparing to unpack .../146-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 461s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 461s Selecting previously unselected package libpaper2:arm64. 461s Preparing to unpack .../147-libpaper2_2.2.5-0.3build1_arm64.deb ... 461s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 461s Selecting previously unselected package libpaper-utils. 461s Preparing to unpack .../148-libpaper-utils_2.2.5-0.3build1_arm64.deb ... 461s Unpacking libpaper-utils (2.2.5-0.3build1) ... 461s Selecting previously unselected package libpcre2-16-0:arm64. 461s Preparing to unpack .../149-libpcre2-16-0_10.46-1_arm64.deb ... 461s Unpacking libpcre2-16-0:arm64 (10.46-1) ... 461s Selecting previously unselected package libpcre2-32-0:arm64. 461s Preparing to unpack .../150-libpcre2-32-0_10.46-1_arm64.deb ... 461s Unpacking libpcre2-32-0:arm64 (10.46-1) ... 461s Selecting previously unselected package libpcre2-posix3:arm64. 461s Preparing to unpack .../151-libpcre2-posix3_10.46-1_arm64.deb ... 461s Unpacking libpcre2-posix3:arm64 (10.46-1) ... 461s Selecting previously unselected package libpcre2-dev:arm64. 461s Preparing to unpack .../152-libpcre2-dev_10.46-1_arm64.deb ... 461s Unpacking libpcre2-dev:arm64 (10.46-1) ... 461s Selecting previously unselected package libpkgconf3:arm64. 461s Preparing to unpack .../153-libpkgconf3_1.8.1-4build1_arm64.deb ... 461s Unpacking libpkgconf3:arm64 (1.8.1-4build1) ... 461s Selecting previously unselected package zlib1g-dev:arm64. 461s Preparing to unpack .../154-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 461s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 461s Selecting previously unselected package libpng-dev:arm64. 461s Preparing to unpack .../155-libpng-dev_1.6.54-1_arm64.deb ... 461s Unpacking libpng-dev:arm64 (1.6.54-1) ... 461s Selecting previously unselected package libreadline-dev:arm64. 461s Preparing to unpack .../156-libreadline-dev_8.3-3_arm64.deb ... 461s Unpacking libreadline-dev:arm64 (8.3-3) ... 461s Selecting previously unselected package libsm6:arm64. 462s Preparing to unpack .../157-libsm6_2%3a1.2.6-1_arm64.deb ... 462s Unpacking libsm6:arm64 (2:1.2.6-1) ... 462s Selecting previously unselected package libtcl8.6:arm64. 462s Preparing to unpack .../158-libtcl8.6_8.6.17+dfsg-1_arm64.deb ... 462s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1) ... 462s Selecting previously unselected package libxft2:arm64. 462s Preparing to unpack .../159-libxft2_2.3.6-1build2_arm64.deb ... 462s Unpacking libxft2:arm64 (2.3.6-1build2) ... 462s Selecting previously unselected package libxss1:arm64. 462s Preparing to unpack .../160-libxss1_1%3a1.2.3-1build4_arm64.deb ... 462s Unpacking libxss1:arm64 (1:1.2.3-1build4) ... 462s Selecting previously unselected package libtk8.6:arm64. 462s Preparing to unpack .../161-libtk8.6_8.6.17-1_arm64.deb ... 462s Unpacking libtk8.6:arm64 (8.6.17-1) ... 462s Selecting previously unselected package libudunits2-data. 462s Preparing to unpack .../162-libudunits2-data_2.2.28-8_all.deb ... 462s Unpacking libudunits2-data (2.2.28-8) ... 462s Selecting previously unselected package libudunits2-0:arm64. 462s Preparing to unpack .../163-libudunits2-0_2.2.28-8_arm64.deb ... 462s Unpacking libudunits2-0:arm64 (2.2.28-8) ... 462s Selecting previously unselected package libxt6t64:arm64. 462s Preparing to unpack .../164-libxt6t64_1%3a1.2.1-1.3_arm64.deb ... 462s Unpacking libxt6t64:arm64 (1:1.2.1-1.3) ... 462s Selecting previously unselected package libzstd-dev:arm64. 462s Preparing to unpack .../165-libzstd-dev_1.5.7+dfsg-2_arm64.deb ... 462s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-2) ... 462s Selecting previously unselected package node-bootstrap-sass. 462s Preparing to unpack .../166-node-bootstrap-sass_3.4.3-2_all.deb ... 462s Unpacking node-bootstrap-sass (3.4.3-2) ... 462s Selecting previously unselected package node-html5shiv. 462s Preparing to unpack .../167-node-html5shiv_3.7.3+dfsg-5_all.deb ... 462s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 462s Selecting previously unselected package node-normalize.css. 462s Preparing to unpack .../168-node-normalize.css_8.0.1-5.1_all.deb ... 462s Unpacking node-normalize.css (8.0.1-5.1) ... 462s Selecting previously unselected package pandoc-data. 462s Preparing to unpack .../169-pandoc-data_3.1.11.1-3build1_all.deb ... 462s Unpacking pandoc-data (3.1.11.1-3build1) ... 462s Selecting previously unselected package pandoc. 462s Preparing to unpack .../170-pandoc_3.1.11.1+ds-4_arm64.deb ... 462s Unpacking pandoc (3.1.11.1+ds-4) ... 463s Selecting previously unselected package zip. 463s Preparing to unpack .../171-zip_3.0-15ubuntu2_arm64.deb ... 463s Unpacking zip (3.0-15ubuntu2) ... 463s Selecting previously unselected package unzip. 463s Preparing to unpack .../172-unzip_6.0-29ubuntu1_arm64.deb ... 463s Unpacking unzip (6.0-29ubuntu1) ... 463s Selecting previously unselected package xdg-utils. 463s Preparing to unpack .../173-xdg-utils_1.2.1-2ubuntu2_all.deb ... 463s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 463s Selecting previously unselected package r-base-core. 463s Preparing to unpack .../174-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 463s Unpacking r-base-core (4.5.2-1ubuntu2) ... 464s Selecting previously unselected package liblzma-dev:arm64. 464s Preparing to unpack .../175-liblzma-dev_5.8.2-2_arm64.deb ... 464s Unpacking liblzma-dev:arm64 (5.8.2-2) ... 464s Selecting previously unselected package pkgconf-bin. 464s Preparing to unpack .../176-pkgconf-bin_1.8.1-4build1_arm64.deb ... 464s Unpacking pkgconf-bin (1.8.1-4build1) ... 464s Selecting previously unselected package pkgconf:arm64. 464s Preparing to unpack .../177-pkgconf_1.8.1-4build1_arm64.deb ... 464s Unpacking pkgconf:arm64 (1.8.1-4build1) ... 464s Selecting previously unselected package libtirpc-dev:arm64. 464s Preparing to unpack .../178-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 464s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 464s Selecting previously unselected package r-base-dev. 464s Preparing to unpack .../179-r-base-dev_4.5.2-1ubuntu2_all.deb ... 464s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 464s Selecting previously unselected package pkg-r-autopkgtest. 464s Preparing to unpack .../180-pkg-r-autopkgtest_20250812_all.deb ... 464s Unpacking pkg-r-autopkgtest (20250812) ... 464s Selecting previously unselected package r-cran-abind. 464s Preparing to unpack .../181-r-cran-abind_1.4-8-1build1_all.deb ... 464s Unpacking r-cran-abind (1.4-8-1build1) ... 464s Selecting previously unselected package r-cran-cli. 464s Preparing to unpack .../182-r-cran-cli_3.6.4-1_arm64.deb ... 464s Unpacking r-cran-cli (3.6.4-1) ... 464s Selecting previously unselected package r-cran-generics. 464s Preparing to unpack .../183-r-cran-generics_0.1.4-1_all.deb ... 464s Unpacking r-cran-generics (0.1.4-1) ... 464s Selecting previously unselected package r-cran-glue. 464s Preparing to unpack .../184-r-cran-glue_1.8.0-1_arm64.deb ... 464s Unpacking r-cran-glue (1.8.0-1) ... 464s Selecting previously unselected package r-cran-rlang. 464s Preparing to unpack .../185-r-cran-rlang_1.1.5-3_arm64.deb ... 464s Unpacking r-cran-rlang (1.1.5-3) ... 464s Selecting previously unselected package r-cran-lifecycle. 464s Preparing to unpack .../186-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 464s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 464s Selecting previously unselected package r-cran-magrittr. 464s Preparing to unpack .../187-r-cran-magrittr_2.0.3-1_arm64.deb ... 464s Unpacking r-cran-magrittr (2.0.3-1) ... 464s Selecting previously unselected package r-cran-utf8. 464s Preparing to unpack .../188-r-cran-utf8_1.2.4-1_arm64.deb ... 464s Unpacking r-cran-utf8 (1.2.4-1) ... 464s Selecting previously unselected package r-cran-vctrs. 464s Preparing to unpack .../189-r-cran-vctrs_0.6.5-1_arm64.deb ... 464s Unpacking r-cran-vctrs (0.6.5-1) ... 464s Selecting previously unselected package r-cran-pillar. 464s Preparing to unpack .../190-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 464s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 464s Selecting previously unselected package r-cran-r6. 465s Preparing to unpack .../191-r-cran-r6_2.6.1-1_all.deb ... 465s Unpacking r-cran-r6 (2.6.1-1) ... 465s Selecting previously unselected package r-cran-fansi. 465s Preparing to unpack .../192-r-cran-fansi_1.0.6-2_arm64.deb ... 465s Unpacking r-cran-fansi (1.0.6-2) ... 465s Selecting previously unselected package r-cran-pkgconfig. 465s Preparing to unpack .../193-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 465s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 465s Selecting previously unselected package r-cran-tibble. 465s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 465s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 465s Selecting previously unselected package r-cran-withr. 465s Preparing to unpack .../195-r-cran-withr_3.0.2+dfsg-1_all.deb ... 465s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 465s Selecting previously unselected package r-cran-tidyselect. 465s Preparing to unpack .../196-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 465s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 465s Selecting previously unselected package r-cran-dplyr. 465s Preparing to unpack .../197-r-cran-dplyr_1.1.4-4_arm64.deb ... 465s Unpacking r-cran-dplyr (1.1.4-4) ... 465s Selecting previously unselected package r-cran-purrr. 465s Preparing to unpack .../198-r-cran-purrr_1.0.4-1_arm64.deb ... 465s Unpacking r-cran-purrr (1.0.4-1) ... 465s Selecting previously unselected package r-cran-mass. 465s Preparing to unpack .../199-r-cran-mass_7.3-65-1_arm64.deb ... 465s Unpacking r-cran-mass (7.3-65-1) ... 465s Selecting previously unselected package r-cran-class. 465s Preparing to unpack .../200-r-cran-class_7.3-23-1_arm64.deb ... 465s Unpacking r-cran-class (7.3-23-1) ... 465s Selecting previously unselected package r-cran-proxy. 465s Preparing to unpack .../201-r-cran-proxy_0.4-27-1_arm64.deb ... 465s Unpacking r-cran-proxy (0.4-27-1) ... 465s Selecting previously unselected package r-cran-e1071. 465s Preparing to unpack .../202-r-cran-e1071_1.7-17-1_arm64.deb ... 465s Unpacking r-cran-e1071 (1.7-17-1) ... 465s Selecting previously unselected package r-cran-kernsmooth. 465s Preparing to unpack .../203-r-cran-kernsmooth_2.23-26-1build1_arm64.deb ... 465s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 465s Selecting previously unselected package r-cran-classint. 465s Preparing to unpack .../204-r-cran-classint_0.4-11+dfsg-1_arm64.deb ... 465s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 465s Selecting previously unselected package r-cran-dbi. 465s Preparing to unpack .../205-r-cran-dbi_1.2.3-1build1_all.deb ... 465s Unpacking r-cran-dbi (1.2.3-1build1) ... 465s Selecting previously unselected package r-cran-littler. 465s Preparing to unpack .../206-r-cran-littler_0.3.21-2_arm64.deb ... 465s Unpacking r-cran-littler (0.3.21-2) ... 465s Selecting previously unselected package r-cran-pkgkitten. 465s Preparing to unpack .../207-r-cran-pkgkitten_0.2.4-1_all.deb ... 465s Unpacking r-cran-pkgkitten (0.2.4-1) ... 465s Selecting previously unselected package r-cran-rcpp. 466s Preparing to unpack .../208-r-cran-rcpp_1.1.0-1_arm64.deb ... 466s Unpacking r-cran-rcpp (1.1.0-1) ... 466s Selecting previously unselected package r-cran-wk. 466s Preparing to unpack .../209-r-cran-wk_0.9.4-1_arm64.deb ... 466s Unpacking r-cran-wk (0.9.4-1) ... 466s Selecting previously unselected package r-cran-s2. 466s Preparing to unpack .../210-r-cran-s2_1.1.9-1build1_arm64.deb ... 466s Unpacking r-cran-s2 (1.1.9-1build1) ... 466s Selecting previously unselected package r-cran-units. 466s Preparing to unpack .../211-r-cran-units_0.8-7+dfsg-2_arm64.deb ... 466s Unpacking r-cran-units (0.8-7+dfsg-2) ... 466s Selecting previously unselected package r-cran-sf. 466s Preparing to unpack .../212-r-cran-sf_1.0-19+dfsg-2build2_arm64.deb ... 466s Unpacking r-cran-sf (1.0-19+dfsg-2build2) ... 466s Selecting previously unselected package r-cran-areal. 466s Preparing to unpack .../213-r-cran-areal_0.1.8+dfsg-2_all.deb ... 466s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 466s Selecting previously unselected package r-cran-sys. 466s Preparing to unpack .../214-r-cran-sys_3.4.3-1_arm64.deb ... 466s Unpacking r-cran-sys (3.4.3-1) ... 466s Selecting previously unselected package r-cran-askpass. 466s Preparing to unpack .../215-r-cran-askpass_1.2.1-1_arm64.deb ... 466s Unpacking r-cran-askpass (1.2.1-1) ... 466s Selecting previously unselected package r-cran-base64enc. 466s Preparing to unpack .../216-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 466s Unpacking r-cran-base64enc (0.1-3-3build1) ... 466s Selecting previously unselected package r-cran-bdsmatrix. 466s Preparing to unpack .../217-r-cran-bdsmatrix_1.3-7-1_arm64.deb ... 466s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 466s Selecting previously unselected package r-cran-brio. 466s Preparing to unpack .../218-r-cran-brio_1.1.5-1_arm64.deb ... 466s Unpacking r-cran-brio (1.1.5-1) ... 466s Selecting previously unselected package r-cran-fastmap. 466s Preparing to unpack .../219-r-cran-fastmap_1.2.0-1_arm64.deb ... 466s Unpacking r-cran-fastmap (1.2.0-1) ... 466s Selecting previously unselected package r-cran-cachem. 466s Preparing to unpack .../220-r-cran-cachem_1.1.0-1_arm64.deb ... 466s Unpacking r-cran-cachem (1.1.0-1) ... 466s Selecting previously unselected package r-cran-digest. 466s Preparing to unpack .../221-r-cran-digest_0.6.39-1_arm64.deb ... 466s Unpacking r-cran-digest (0.6.39-1) ... 466s Selecting previously unselected package r-cran-htmltools. 466s Preparing to unpack .../222-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 466s Unpacking r-cran-htmltools (0.5.8.1-1) ... 466s Selecting previously unselected package r-cran-jquerylib. 466s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 466s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 466s Selecting previously unselected package r-cran-jsonlite. 466s Preparing to unpack .../224-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 466s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 467s Selecting previously unselected package r-cran-memoise. 467s Preparing to unpack .../225-r-cran-memoise_2.0.1-1build1_all.deb ... 467s Unpacking r-cran-memoise (2.0.1-1build1) ... 467s Selecting previously unselected package r-cran-mime. 467s Preparing to unpack .../226-r-cran-mime_0.12-2_arm64.deb ... 467s Unpacking r-cran-mime (0.12-2) ... 467s Selecting previously unselected package r-cran-fs. 467s Preparing to unpack .../227-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 467s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 467s Selecting previously unselected package r-cran-rappdirs. 467s Preparing to unpack .../228-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 467s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 467s Selecting previously unselected package r-cran-sass. 467s Preparing to unpack .../229-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 467s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 467s Selecting previously unselected package r-cran-bslib. 467s Preparing to unpack .../230-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 467s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 467s Selecting previously unselected package r-cran-cairo. 467s Preparing to unpack .../231-r-cran-cairo_1.6-2-1_arm64.deb ... 467s Unpacking r-cran-cairo (1.6-2-1) ... 467s Selecting previously unselected package r-cran-ps. 467s Preparing to unpack .../232-r-cran-ps_1.9.0-1_arm64.deb ... 467s Unpacking r-cran-ps (1.9.0-1) ... 467s Selecting previously unselected package r-cran-processx. 467s Preparing to unpack .../233-r-cran-processx_3.8.6-1_arm64.deb ... 467s Unpacking r-cran-processx (3.8.6-1) ... 467s Selecting previously unselected package r-cran-callr. 467s Preparing to unpack .../234-r-cran-callr_3.7.6-1_all.deb ... 467s Unpacking r-cran-callr (3.7.6-1) ... 467s Selecting previously unselected package r-cran-cftime. 467s Preparing to unpack .../235-r-cran-cftime_1.7.2-1_all.deb ... 467s Unpacking r-cran-cftime (1.7.2-1) ... 467s Selecting previously unselected package r-cran-cluster. 467s Preparing to unpack .../236-r-cran-cluster_2.1.8.1-1_arm64.deb ... 467s Unpacking r-cran-cluster (2.1.8.1-1) ... 467s Selecting previously unselected package r-cran-clue. 467s Preparing to unpack .../237-r-cran-clue_0.3-66-1_arm64.deb ... 467s Unpacking r-cran-clue (0.3-66-1) ... 467s Selecting previously unselected package r-cran-codetools. 467s Preparing to unpack .../238-r-cran-codetools_0.2-20-1build1_all.deb ... 467s Unpacking r-cran-codetools (0.2-20-1build1) ... 467s Selecting previously unselected package r-cran-collapse. 467s Preparing to unpack .../239-r-cran-collapse_2.1.0-1_arm64.deb ... 467s Unpacking r-cran-collapse (2.1.0-1) ... 467s Selecting previously unselected package r-cran-commonmark. 467s Preparing to unpack .../240-r-cran-commonmark_1.9.5-1_arm64.deb ... 467s Unpacking r-cran-commonmark (1.9.5-1) ... 467s Selecting previously unselected package r-cran-lazyeval. 468s Preparing to unpack .../241-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 468s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 468s Selecting previously unselected package r-cran-rex. 468s Preparing to unpack .../242-r-cran-rex_1.2.1-1build1_all.deb ... 468s Unpacking r-cran-rex (1.2.1-1build1) ... 468s Selecting previously unselected package r-cran-curl. 468s Preparing to unpack .../243-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 468s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 468s Selecting previously unselected package r-cran-openssl. 468s Preparing to unpack .../244-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 468s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 468s Selecting previously unselected package r-cran-httr. 468s Preparing to unpack .../245-r-cran-httr_1.4.7+dfsg-1_all.deb ... 468s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 468s Selecting previously unselected package r-cran-crayon. 468s Preparing to unpack .../246-r-cran-crayon_1.5.3-1_all.deb ... 468s Unpacking r-cran-crayon (1.5.3-1) ... 468s Selecting previously unselected package r-cran-yaml. 468s Preparing to unpack .../247-r-cran-yaml_2.3.10-1_arm64.deb ... 468s Unpacking r-cran-yaml (2.3.10-1) ... 468s Selecting previously unselected package r-cran-covr. 468s Preparing to unpack .../248-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 468s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 468s Selecting previously unselected package r-cran-cpp11. 468s Preparing to unpack .../249-r-cran-cpp11_0.5.3-1_all.deb ... 468s Unpacking r-cran-cpp11 (0.5.3-1) ... 468s Selecting previously unselected package r-cran-deldir. 468s Preparing to unpack .../250-r-cran-deldir_2.0-4-1build1_arm64.deb ... 468s Unpacking r-cran-deldir (2.0-4-1build1) ... 468s Selecting previously unselected package r-cran-desc. 468s Preparing to unpack .../251-r-cran-desc_1.4.3-1_all.deb ... 468s Unpacking r-cran-desc (1.4.3-1) ... 468s Selecting previously unselected package r-cran-diffobj. 468s Preparing to unpack .../252-r-cran-diffobj_0.3.5-1build1_arm64.deb ... 468s Unpacking r-cran-diffobj (0.3.5-1build1) ... 468s Selecting previously unselected package r-cran-evaluate. 468s Preparing to unpack .../253-r-cran-evaluate_1.0.3-1_all.deb ... 468s Unpacking r-cran-evaluate (1.0.3-1) ... 468s Selecting previously unselected package r-cran-farver. 468s Preparing to unpack .../254-r-cran-farver_2.1.2-1_arm64.deb ... 468s Unpacking r-cran-farver (2.1.2-1) ... 468s Selecting previously unselected package r-cran-fnn. 468s Preparing to unpack .../255-r-cran-fnn_1.1.4.1-1_arm64.deb ... 468s Unpacking r-cran-fnn (1.1.4.1-1) ... 469s Selecting previously unselected package r-cran-fontawesome. 469s Preparing to unpack .../256-r-cran-fontawesome_0.5.3-1_all.deb ... 469s Unpacking r-cran-fontawesome (0.5.3-1) ... 469s Selecting previously unselected package r-cran-formula. 469s Preparing to unpack .../257-r-cran-formula_1.2-5-1_all.deb ... 469s Unpacking r-cran-formula (1.2-5-1) ... 469s Selecting previously unselected package r-cran-globals. 469s Preparing to unpack .../258-r-cran-globals_0.18.0-1_all.deb ... 469s Unpacking r-cran-globals (0.18.0-1) ... 469s Selecting previously unselected package r-cran-listenv. 469s Preparing to unpack .../259-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 469s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 469s Selecting previously unselected package r-cran-parallelly. 469s Preparing to unpack .../260-r-cran-parallelly_1.42.0-1_arm64.deb ... 469s Unpacking r-cran-parallelly (1.42.0-1) ... 469s Selecting previously unselected package r-cran-future. 469s Preparing to unpack .../261-r-cran-future_1.34.0+dfsg-1_all.deb ... 469s Unpacking r-cran-future (1.34.0+dfsg-1) ... 469s Selecting previously unselected package r-cran-future.apply. 469s Preparing to unpack .../262-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 469s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 469s Selecting previously unselected package r-cran-gtable. 469s Preparing to unpack .../263-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 469s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 469s Selecting previously unselected package r-cran-isoband. 469s Preparing to unpack .../264-r-cran-isoband_0.2.7-1_arm64.deb ... 469s Unpacking r-cran-isoband (0.2.7-1) ... 469s Selecting previously unselected package r-cran-lattice. 469s Preparing to unpack .../265-r-cran-lattice_0.22-7-1_arm64.deb ... 469s Unpacking r-cran-lattice (0.22-7-1) ... 469s Selecting previously unselected package r-cran-nlme. 469s Preparing to unpack .../266-r-cran-nlme_3.1.168-1_arm64.deb ... 469s Unpacking r-cran-nlme (3.1.168-1) ... 469s Selecting previously unselected package r-cran-matrix. 469s Preparing to unpack .../267-r-cran-matrix_1.7-4-1_arm64.deb ... 469s Unpacking r-cran-matrix (1.7-4-1) ... 469s Selecting previously unselected package r-cran-mgcv. 469s Preparing to unpack .../268-r-cran-mgcv_1.9-4-1_arm64.deb ... 469s Unpacking r-cran-mgcv (1.9-4-1) ... 469s Selecting previously unselected package r-cran-labeling. 469s Preparing to unpack .../269-r-cran-labeling_0.4.3-1_all.deb ... 469s Unpacking r-cran-labeling (0.4.3-1) ... 469s Selecting previously unselected package r-cran-rcolorbrewer. 469s Preparing to unpack .../270-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 469s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 469s Selecting previously unselected package r-cran-viridislite. 469s Preparing to unpack .../271-r-cran-viridislite_0.4.2-2_all.deb ... 469s Unpacking r-cran-viridislite (0.4.2-2) ... 469s Selecting previously unselected package r-cran-scales. 470s Preparing to unpack .../272-r-cran-scales_1.4.0-1_all.deb ... 470s Unpacking r-cran-scales (1.4.0-1) ... 470s Selecting previously unselected package r-cran-ggplot2. 470s Preparing to unpack .../273-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 470s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 470s Selecting previously unselected package r-cran-tweenr. 470s Preparing to unpack .../274-r-cran-tweenr_2.0.3-1_arm64.deb ... 470s Unpacking r-cran-tweenr (2.0.3-1) ... 470s Selecting previously unselected package r-cran-polyclip. 470s Preparing to unpack .../275-r-cran-polyclip_1.10-7-1_arm64.deb ... 470s Unpacking r-cran-polyclip (1.10-7-1) ... 470s Selecting previously unselected package r-cran-systemfonts. 470s Preparing to unpack .../276-r-cran-systemfonts_1.2.1-1_arm64.deb ... 470s Unpacking r-cran-systemfonts (1.2.1-1) ... 470s Selecting previously unselected package r-cran-rcppeigen. 470s Preparing to unpack .../277-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 470s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 470s Selecting previously unselected package r-cran-ggforce. 470s Preparing to unpack .../278-r-cran-ggforce_0.4.2-1_arm64.deb ... 470s Unpacking r-cran-ggforce (0.4.2-1) ... 470s Selecting previously unselected package r-cran-stringi. 470s Preparing to unpack .../279-r-cran-stringi_1.8.4-1build2_arm64.deb ... 470s Unpacking r-cran-stringi (1.8.4-1build2) ... 470s Selecting previously unselected package r-cran-stringr. 470s Preparing to unpack .../280-r-cran-stringr_1.5.1-1_all.deb ... 470s Unpacking r-cran-stringr (1.5.1-1) ... 470s Selecting previously unselected package r-cran-ggthemes. 470s Preparing to unpack .../281-r-cran-ggthemes_5.2.0-1_all.deb ... 470s Unpacking r-cran-ggthemes (5.2.0-1) ... 470s Selecting previously unselected package r-cran-goftest. 470s Preparing to unpack .../282-r-cran-goftest_1.2-3-1build1_arm64.deb ... 470s Unpacking r-cran-goftest (1.2-3-1build1) ... 470s Selecting previously unselected package r-cran-gridextra. 470s Preparing to unpack .../283-r-cran-gridextra_2.3-3build2_all.deb ... 470s Unpacking r-cran-gridextra (2.3-3build2) ... 471s Selecting previously unselected package r-cran-xfun. 471s Preparing to unpack .../284-r-cran-xfun_0.55+dfsg-1_arm64.deb ... 471s Unpacking r-cran-xfun (0.55+dfsg-1) ... 471s Selecting previously unselected package r-cran-highr. 471s Preparing to unpack .../285-r-cran-highr_0.11+dfsg-1_all.deb ... 471s Unpacking r-cran-highr (0.11+dfsg-1) ... 471s Selecting previously unselected package r-cran-later. 471s Preparing to unpack .../286-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 471s Unpacking r-cran-later (1.4.1+dfsg-1) ... 471s Selecting previously unselected package r-cran-promises. 471s Preparing to unpack .../287-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 471s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 471s Selecting previously unselected package r-cran-httpuv. 471s Preparing to unpack .../288-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 471s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 471s Selecting previously unselected package r-cran-intervals. 471s Preparing to unpack .../289-r-cran-intervals_0.15.5-1_arm64.deb ... 471s Unpacking r-cran-intervals (0.15.5-1) ... 471s Selecting previously unselected package libjs-mathjax. 471s Preparing to unpack .../290-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 471s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 471s Selecting previously unselected package r-cran-knitr. 471s Preparing to unpack .../291-r-cran-knitr_1.51+dfsg-1_all.deb ... 471s Unpacking r-cran-knitr (1.51+dfsg-1) ... 471s Selecting previously unselected package r-cran-zoo. 471s Preparing to unpack .../292-r-cran-zoo_1.8-15-1_arm64.deb ... 471s Unpacking r-cran-zoo (1.8-15-1) ... 471s Selecting previously unselected package r-cran-lmtest. 471s Preparing to unpack .../293-r-cran-lmtest_0.9.40-1build1_arm64.deb ... 471s Unpacking r-cran-lmtest (0.9.40-1build1) ... 472s Selecting previously unselected package r-cran-lwgeom. 472s Preparing to unpack .../294-r-cran-lwgeom_0.2-14-1_arm64.deb ... 472s Unpacking r-cran-lwgeom (0.2-14-1) ... 472s Selecting previously unselected package r-cran-maps. 472s Preparing to unpack .../295-r-cran-maps_3.4.2.1-1_arm64.deb ... 472s Unpacking r-cran-maps (3.4.2.1-1) ... 472s Selecting previously unselected package r-cran-mapdata. 472s Preparing to unpack .../296-r-cran-mapdata_2.3.1-1_arm64.deb ... 472s Unpacking r-cran-mapdata (2.3.1-1) ... 472s Selecting previously unselected package r-cran-misctools. 472s Preparing to unpack .../297-r-cran-misctools_0.6-28-1_all.deb ... 472s Unpacking r-cran-misctools (0.6-28-1) ... 472s Selecting previously unselected package r-cran-sandwich. 472s Preparing to unpack .../298-r-cran-sandwich_3.1-1-1_all.deb ... 472s Unpacking r-cran-sandwich (3.1-1-1) ... 472s Selecting previously unselected package r-cran-maxlik. 472s Preparing to unpack .../299-r-cran-maxlik_1.5-2.2-1_all.deb ... 472s Unpacking r-cran-maxlik (1.5-2.2-1) ... 472s Selecting previously unselected package r-cran-rnetcdf. 472s Preparing to unpack .../300-r-cran-rnetcdf_2.9-2-1_arm64.deb ... 472s Unpacking r-cran-rnetcdf (2.9-2-1) ... 472s Selecting previously unselected package r-cran-tidyr. 472s Preparing to unpack .../301-r-cran-tidyr_1.3.1-1_arm64.deb ... 472s Unpacking r-cran-tidyr (1.3.1-1) ... 472s Selecting previously unselected package r-cran-ncmeta. 473s Preparing to unpack .../302-r-cran-ncmeta_0.4.0-1_all.deb ... 473s Unpacking r-cran-ncmeta (0.4.0-1) ... 473s Selecting previously unselected package r-cran-stars. 473s Preparing to unpack .../303-r-cran-stars_0.6-8-1_all.deb ... 473s Unpacking r-cran-stars (0.6-8-1) ... 473s Selecting previously unselected package r-cran-ncdfgeom. 473s Preparing to unpack .../304-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 473s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 473s Selecting previously unselected package r-cran-pbapply. 473s Preparing to unpack .../305-r-cran-pbapply_1.7-2-1_all.deb ... 473s Unpacking r-cran-pbapply (1.7-2-1) ... 473s Selecting previously unselected package r-cran-pcict. 473s Preparing to unpack .../306-r-cran-pcict_0.5-4.4-1_arm64.deb ... 473s Unpacking r-cran-pcict (0.5-4.4-1) ... 473s Selecting previously unselected package r-cran-pkgbuild. 473s Preparing to unpack .../307-r-cran-pkgbuild_1.4.8-1_all.deb ... 473s Unpacking r-cran-pkgbuild (1.4.8-1) ... 473s Selecting previously unselected package r-cran-rprojroot. 473s Preparing to unpack .../308-r-cran-rprojroot_2.1.1-1_all.deb ... 473s Unpacking r-cran-rprojroot (2.1.1-1) ... 473s Selecting previously unselected package r-cran-pkgload. 473s Preparing to unpack .../309-r-cran-pkgload_1.4.1-1_all.deb ... 473s Unpacking r-cran-pkgload (1.4.1-1) ... 473s Selecting previously unselected package r-cran-rbibutils. 473s Preparing to unpack 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unselected package r-cran-terra. 473s Preparing to unpack .../316-r-cran-terra_1.8-70-1build2_arm64.deb ... 473s Unpacking r-cran-terra (1.8-70-1build2) ... 474s Selecting previously unselected package r-cran-raster. 474s Preparing to unpack .../317-r-cran-raster_3.6-32-1_arm64.deb ... 474s Unpacking r-cran-raster (3.6-32-1) ... 474s Selecting previously unselected package r-cran-tinytex. 474s Preparing to unpack .../318-r-cran-tinytex_0.58-1_all.deb ... 474s Unpacking r-cran-tinytex (0.58-1) ... 474s Selecting previously unselected package libjs-modernizr. 474s Preparing to unpack .../319-libjs-modernizr_3.13.0-0.1build1_all.deb ... 474s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 474s Selecting previously unselected package r-cran-xtable. 474s Preparing to unpack .../320-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 474s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 474s Selecting previously unselected package r-cran-sourcetools. 474s Preparing to unpack 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(1.1.6+dfsg-1) ... 479s Processing triggers for libc-bin (2.42-2ubuntu4) ... 479s Processing triggers for man-db (2.13.1-1) ... 481s Processing triggers for install-info (7.2-5) ... 483s autopkgtest [17:59:39]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 483s autopkgtest [17:59:39]: test pkg-r-autopkgtest: [----------------------- 484s Test: Try to load the R library stars 484s 484s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 484s Copyright (C) 2025 The R Foundation for Statistical Computing 484s Platform: aarch64-unknown-linux-gnu 484s 484s R is free software and comes with ABSOLUTELY NO WARRANTY. 484s You are welcome to redistribute it under certain conditions. 484s Type 'license()' or 'licence()' for distribution details. 484s 484s R is a collaborative project with many contributors. 484s Type 'contributors()' for more information and 484s 'citation()' on how to cite R or R packages in publications. 484s 484s Type 'demo()' for some demos, 'help()' for on-line help, or 484s 'help.start()' for an HTML browser interface to help. 484s Type 'q()' to quit R. 484s 484s > library('stars') 484s Loading required package: abind 484s Loading required package: sf 485s Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.0; sf_use_s2() is TRUE 485s > 485s autopkgtest [17:59:41]: test pkg-r-autopkgtest: -----------------------] 486s autopkgtest [17:59:42]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 486s pkg-r-autopkgtest PASS 486s autopkgtest [17:59:42]: @@@@@@@@@@@@@@@@@@@@ summary 486s run-unit-test PASS 486s pkg-r-autopkgtest PASS