0s autopkgtest [00:09:26]: starting date and time: 2026-02-10 00:09:26+0000 0s autopkgtest [00:09:26]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [00:09:26]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.rgycslim/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-cran-shazam --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-arm64-14.secgroup --name adt-resolute-arm64-r-cran-shazam-20260210-000926-juju-7f2275-prod-proposed-migration-environment-15-c1ec9b04-7e92-44a0-94b7-50a0304742e9 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-arm64-r-cran-shazam-20260210-000926-juju-7f2275-prod-proposed-migration-environment-15-c1ec9b04-7e92-44a0-94b7-50a0304742e9 from image adt/ubuntu-resolute-arm64-server-20260209.img (UUID 793037ca-75af-461b-82de-f8081300b2e3)... 130s autopkgtest [00:11:36]: testbed dpkg architecture: arm64 130s autopkgtest [00:11:36]: testbed apt version: 3.1.15 131s autopkgtest [00:11:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 131s autopkgtest [00:11:37]: testbed release detected to be: None 132s autopkgtest [00:11:38]: updating testbed package index (apt update) 133s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 133s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 133s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 133s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 133s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 133s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 133s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 137s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [246 kB] 137s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [6216 B] 137s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [304 B] 137s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [1580 kB] 140s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [32.0 kB] 140s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [21.7 kB] 140s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [688 B] 141s Fetched 3862 kB in 8s (475 kB/s) 142s Reading package lists... 143s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 143s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 143s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 143s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 144s Reading package lists... 144s Reading package lists... 144s Building dependency tree... 144s Reading state information... 144s Calculating upgrade... 145s The following packages will be upgraded: 145s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 145s libip6tc2 libxtables12 wget 145s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s Need to get 2534 kB of archives. 145s After this operation, 18.4 kB of additional disk space will be used. 145s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 iptables arm64 1.8.11-2ubuntu3 [386 kB] 145s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libip4tc2 arm64 1.8.11-2ubuntu3 [24.3 kB] 145s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libip6tc2 arm64 1.8.11-2ubuntu3 [24.7 kB] 145s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libxtables12 arm64 1.8.11-2ubuntu3 [36.7 kB] 145s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 iproute2 arm64 6.18.0-1ubuntu1 [1171 kB] 147s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libcryptsetup12 arm64 2:2.8.0-1ubuntu3 [274 kB] 147s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 wget arm64 1.25.0-2ubuntu4 [344 kB] 147s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cryptsetup-bin arm64 2:2.8.0-1ubuntu3 [227 kB] 147s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 dracut-install arm64 109-11ubuntu1 [45.3 kB] 147s dpkg-preconfigure: unable to re-open stdin: No such file or directory 147s Fetched 2534 kB in 2s (1307 kB/s) 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136597 files and directories currently installed.) 147s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_arm64.deb ... 147s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 147s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_arm64.deb ... 147s Unpacking libip4tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 147s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_arm64.deb ... 147s Unpacking libip6tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 148s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_arm64.deb ... 148s Unpacking libxtables12:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 148s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_arm64.deb ... 148s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 148s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_arm64.deb ... 148s Unpacking libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 148s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_arm64.deb ... 148s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 148s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_arm64.deb ... 148s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 148s Preparing to unpack .../8-dracut-install_109-11ubuntu1_arm64.deb ... 148s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 148s Setting up libip4tc2:arm64 (1.8.11-2ubuntu3) ... 148s Setting up wget (1.25.0-2ubuntu4) ... 148s Setting up libip6tc2:arm64 (1.8.11-2ubuntu3) ... 148s Setting up libxtables12:arm64 (1.8.11-2ubuntu3) ... 148s Setting up dracut-install (109-11ubuntu1) ... 148s Setting up libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) ... 148s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 148s Setting up iptables (1.8.11-2ubuntu3) ... 148s Setting up iproute2 (6.18.0-1ubuntu1) ... 149s Processing triggers for man-db (2.13.1-1build1) ... 150s Processing triggers for install-info (7.2-5) ... 150s Processing triggers for libc-bin (2.42-2ubuntu4) ... 150s autopkgtest [00:11:56]: upgrading testbed (apt dist-upgrade and autopurge) 150s Reading package lists... 150s Building dependency tree... 150s Reading state information... 150s Calculating upgrade... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Solving dependencies... 152s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 154s autopkgtest [00:12:00]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 19:46:27 UTC 2026 154s autopkgtest [00:12:00]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-shazam 158s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-shazam 1.2.0-1 (dsc) [2383 B] 158s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-shazam 1.2.0-1 (tar) [1751 kB] 158s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-shazam 1.2.0-1 (diff) [8748 B] 159s gpgv: Signature made Tue Oct 17 12:32:54 2023 UTC 159s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 159s gpgv: issuer "tille@debian.org" 159s gpgv: Can't check signature: No public key 159s dpkg-source: warning: cannot verify inline signature for ./r-cran-shazam_1.2.0-1.dsc: no acceptable signature found 159s autopkgtest [00:12:05]: testing package r-cran-shazam version 1.2.0-1 159s autopkgtest [00:12:05]: build not needed 160s autopkgtest [00:12:06]: test pkg-r-autopkgtest: preparing testbed 160s Reading package lists... 160s Building dependency tree... 160s Reading state information... 161s Solving dependencies... 161s The following NEW packages will be installed: 161s build-essential cpp cpp-15 cpp-15-aarch64-linux-gnu cpp-aarch64-linux-gnu 161s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 161s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15 161s g++-15-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-15 161s gcc-15-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-15 161s gfortran-15-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 161s javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev 161s libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 161s libcolamd3 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 161s libgcc-15-dev libgfortran-15-dev libgfortran5 libglpk40 libgomp1 161s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 161s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 161s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 161s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 161s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 161s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 161s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 161s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 161s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 161s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 161s libpixman-1-0 libpkgconf3 libpng-dev libreadline-dev libsharpyuv0 libsm6 161s libstdc++-15-dev libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 161s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 161s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 libzstd-dev linux-libc-dev 161s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 161s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biobase 161s r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biostrings 161s r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata 161s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-iranges 161s r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-s4arrays 161s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 161s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ade4 161s r-cran-airr r-cran-alakazam r-cran-ape r-cran-askpass r-cran-base64enc 161s r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib 161s r-cran-cachem r-cran-callr r-cran-cli r-cran-clipr r-cran-codetools 161s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-desc 161s r-cran-diffobj r-cran-digest r-cran-diptest r-cran-doparallel r-cran-dplyr 161s r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome 161s r-cran-foreach r-cran-formatr r-cran-fs r-cran-futile.logger 161s r-cran-futile.options r-cran-generics r-cran-ggplot2 r-cran-glue 161s r-cran-gtable r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv 161s r-cran-httr r-cran-igraph r-cran-isoband r-cran-iterators r-cran-jquerylib 161s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling 161s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 161s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 161s r-cran-memoise r-cran-mime r-cran-nlme r-cran-openssl r-cran-pillar 161s r-cran-pixmap r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 161s r-cran-pkgload r-cran-praise r-cran-prettyunits r-cran-processx 161s r-cran-progress r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 161s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo 161s r-cran-readr r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-s7 161s r-cran-sass r-cran-scales r-cran-segmented r-cran-seqinr r-cran-shazam 161s r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-sp r-cran-stringi 161s r-cran-stringr r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr 161s r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-vctrs 161s r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun 161s r-cran-xtable r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip 161s zlib1g-dev 162s 0 upgraded, 277 newly installed, 0 to remove and 0 not upgraded. 162s Need to get 336 MB of archives. 162s After this operation, 1147 MB of additional disk space will be used. 162s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libc-dev-bin arm64 2.42-2ubuntu4 [22.5 kB] 162s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 linux-libc-dev arm64 6.19.0-3.3 [1819 kB] 165s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libcrypt-dev arm64 1:4.5.1-1 [123 kB] 165s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 rpcsvc-proto arm64 1.4.3-1build1 [65.6 kB] 165s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 libc6-dev arm64 2.42-2ubuntu4 [1765 kB] 168s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1build1 [676 kB] 169s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-2 [55.6 kB] 169s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [11.7 MB] 188s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-12ubuntu1 [1030 B] 188s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 188s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 188s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-12ubuntu1 [49.0 kB] 188s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 188s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-12ubuntu1 [27.8 kB] 188s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-12ubuntu1 [2920 kB] 192s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-12ubuntu1 [1316 kB] 194s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-12ubuntu1 [2688 kB] 198s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-12ubuntu1 [1175 kB] 200s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-12ubuntu1 [1638 kB] 202s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-12ubuntu1 [2600 kB] 206s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [23.1 MB] 241s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-12ubuntu1 [519 kB] 241s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 241s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 241s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-12ubuntu1 [2549 kB] 245s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [13.2 MB] 266s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-12ubuntu1 [25.3 kB] 266s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 266s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 266s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu2 [5254 B] 266s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 dctrl-tools arm64 2.24-3build4 [102 kB] 266s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 266s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 268s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 268s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 268s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 268s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 268s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 268s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 271s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 271s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran-15-dev arm64 15.2.0-12ubuntu1 [490 kB] 271s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [12.5 MB] 290s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15 arm64 15.2.0-12ubuntu1 [18.1 kB] 290s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1022 B] 290s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran arm64 4:15.2.0-4ubuntu1 [1160 B] 290s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 icu-devtools arm64 78.2-1ubuntu1 [207 kB] 290s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1build1 [4864 B] 290s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libsuitesparseconfig7 arm64 1:7.12.1+dfsg-1 [22.0 kB] 290s Get:49 http://ftpmaster.internal/ubuntu resolute/universe arm64 libamd3 arm64 1:7.12.1+dfsg-1 [34.6 kB] 290s Get:50 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 290s Get:51 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas-dev arm64 3.12.1-7ubuntu1 [160 kB] 290s Get:52 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost1.90-dev arm64 1.90.0-2ubuntu1 [11.5 MB] 315s Get:53 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost-dev arm64 1.90.0.0ubuntu3 [4764 B] 315s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-dev arm64 1.0.8-6build2 [34.9 kB] 315s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 315s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 315s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 315s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 315s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 316s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libcolamd3 arm64 1:7.12.1+dfsg-1 [27.1 kB] 317s Get:61 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 317s Get:62 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2build1 [46.8 kB] 317s Get:63 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate-dev arm64 1.23-2build1 [54.3 kB] 317s Get:64 http://ftpmaster.internal/ubuntu resolute/main arm64 libltdl7 arm64 2.5.4-9 [43.3 kB] 317s Get:65 http://ftpmaster.internal/ubuntu resolute/universe arm64 libglpk40 arm64 5.0-2 [347 kB] 317s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 317s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.2-1 [510 kB] 317s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 317s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 317s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libicu-dev arm64 78.2-1ubuntu1 [12.5 MB] 346s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu3 [161 kB] 346s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu3 [301 kB] 346s Get:73 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 346s Get:74 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 346s Get:75 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 346s Get:76 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 346s Get:77 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 346s Get:78 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 347s Get:79 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 347s Get:80 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 347s Get:81 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 347s Get:82 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 347s Get:83 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 347s Get:84 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 347s Get:85 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 347s Get:86 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 347s Get:87 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 347s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 347s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 347s Get:90 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 351s Get:91 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack-dev arm64 3.12.1-7ubuntu1 [4456 kB] 357s Get:92 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 357s Get:93 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 357s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 libncurses-dev arm64 6.6+20251231-1 [391 kB] 357s Get:95 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 357s Get:96 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 357s Get:97 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 357s Get:98 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 357s Get:99 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 357s Get:100 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 357s Get:101 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 357s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-16-0 arm64 10.46-1 [225 kB] 357s Get:103 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-32-0 arm64 10.46-1 [213 kB] 357s Get:104 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-posix3 arm64 10.46-1 [7300 B] 358s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-dev arm64 10.46-1 [772 kB] 359s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 359s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 360s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libpng-dev arm64 1.6.54-1 [268 kB] 360s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 libreadline-dev arm64 8.3-3 [199 kB] 360s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 360s Get:111 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1build1 [16.8 kB] 360s Get:112 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1build1 [983 kB] 361s Get:113 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 361s Get:114 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 361s Get:115 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 361s Get:116 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 361s Get:117 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 361s Get:118 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 363s Get:119 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 363s Get:120 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-3 [349 kB] 363s Get:121 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 363s Get:122 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 363s Get:123 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 363s Get:124 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 363s Get:125 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 407s Get:126 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu3 [170 kB] 407s Get:127 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 407s Get:128 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 407s Get:129 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 472s Get:130 http://ftpmaster.internal/ubuntu resolute/main arm64 liblzma-dev arm64 5.8.2-2 [180 kB] 472s Get:131 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 472s Get:132 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 472s Get:133 http://ftpmaster.internal/ubuntu resolute/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 472s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 472s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 pkg-r-autopkgtest all 20250812 [6158 B] 473s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 473s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 479s Get:138 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 479s Get:139 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lambda.r all 1.2.4-2build2 [118 kB] 479s Get:140 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB] 479s Get:141 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB] 479s Get:142 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB] 479s Get:143 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 479s Get:144 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 479s Get:145 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 479s Get:146 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 482s Get:147 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 485s Get:148 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 488s Get:149 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 488s Get:150 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 489s Get:151 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 489s Get:152 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 489s Get:153 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 489s Get:154 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 489s Get:155 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 489s Get:156 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 489s Get:157 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 489s Get:158 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 489s Get:159 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 489s Get:160 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 514s Get:161 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 521s Get:162 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 521s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 546s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 549s Get:165 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 558s Get:166 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 558s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 558s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 558s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 559s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-2 [1369 kB] 561s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 564s Get:172 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 569s Get:173 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 572s Get:174 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 572s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 574s Get:176 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 582s Get:177 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 585s Get:178 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB] 588s Get:179 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pixmap all 0.4-14-1 [217 kB] 588s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sp arm64 1:2.2-0+dfsg-1 [1443 kB] 590s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.22-1 [85.1 kB] 590s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 590s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 593s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpparmadillo arm64 15.2.3-1-1 [916 kB] 594s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ade4 arm64 1.7-23-1 [5381 kB] 603s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 606s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clipr all 0.8.0-1build1 [54.0 kB] 607s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 610s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 610s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 610s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 610s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 612s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hms all 1.1.4-1 [102 kB] 612s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 614s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 614s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 614s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 614s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 614s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 614s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit64 arm64 4.6.0-1-4 [495 kB] 614s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 614s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 614s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tzdb arm64 0.5.0-1 [530 kB] 615s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 615s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 615s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vroom arm64 1.7.0-1 [887 kB] 617s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-readr arm64 2.1.6-1 [800 kB] 619s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 621s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 621s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-airr all 1.5.0+dfsg-1 [329 kB] 621s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 621s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 623s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s7 arm64 0.2.0-1 [329 kB] 623s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 625s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 625s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 626s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.3-1 [1088 kB] 627s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 628s Get:219 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 636s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB] 640s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 640s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ape arm64 5.8-1-1 [2901 kB] 645s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 645s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 648s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-igraph arm64 2.1.4-1build1 [5151 kB] 656s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-segmented all 2.1-4-1 [1376 kB] 659s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-seqinr arm64 4.2-36-1 [4013 kB] 668s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 669s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 669s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 671s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-alakazam arm64 1.3.0-1 [2407 kB] 675s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 675s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 675s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 675s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 675s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 675s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 675s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 675s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 675s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 675s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 677s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 683s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 683s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 683s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 683s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 683s Get:247 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 683s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1build1 [1154 kB] 685s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diptest arm64 0.77-1-1 [189 kB] 685s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-iterators all 1.0.14-1build1 [336 kB] 685s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-foreach all 1.5.2-1build1 [124 kB] 685s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-doparallel all 1.0.17-1build1 [189 kB] 685s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.5-1 [117 kB] 685s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 687s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 688s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 688s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 688s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 688s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 688s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-kernsmooth arm64 2.23-26-1build1 [93.6 kB] 689s Get:261 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 698s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 700s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 700s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 700s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.1.1-1 [131 kB] 700s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.1-1 [252 kB] 700s Get:267 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 700s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 700s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 700s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 701s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 701s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 701s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 707s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 710s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shazam all 1.2.0-1 [2184 kB] 714s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.2-1 [153 kB] 714s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 717s Preconfiguring packages ... 717s Fetched 336 MB in 9min 15s (604 kB/s) 717s Selecting previously unselected package libc-dev-bin. 717s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136600 files and directories currently installed.) 717s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_arm64.deb ... 717s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 717s Selecting previously unselected package linux-libc-dev:arm64. 717s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_arm64.deb ... 717s Unpacking linux-libc-dev:arm64 (6.19.0-3.3) ... 717s Selecting previously unselected package libcrypt-dev:arm64. 717s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_arm64.deb ... 717s Unpacking libcrypt-dev:arm64 (1:4.5.1-1) ... 717s Selecting previously unselected package rpcsvc-proto. 717s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_arm64.deb ... 717s Unpacking rpcsvc-proto (1.4.3-1build1) ... 717s Selecting previously unselected package libc6-dev:arm64. 717s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_arm64.deb ... 717s Unpacking libc6-dev:arm64 (2.42-2ubuntu4) ... 717s Selecting previously unselected package libisl23:arm64. 718s Preparing to unpack .../005-libisl23_0.27-1build1_arm64.deb ... 718s Unpacking libisl23:arm64 (0.27-1build1) ... 718s Selecting previously unselected package libmpc3:arm64. 718s Preparing to unpack .../006-libmpc3_1.3.1-2_arm64.deb ... 718s Unpacking libmpc3:arm64 (1.3.1-2) ... 718s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 718s Preparing to unpack .../007-cpp-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package cpp-15. 718s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package cpp-aarch64-linux-gnu. 718s Preparing to unpack .../009-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 718s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 718s Selecting previously unselected package cpp. 718s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 718s Unpacking cpp (4:15.2.0-4ubuntu1) ... 718s Selecting previously unselected package libcc1-0:arm64. 718s Preparing to unpack .../011-libcc1-0_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libcc1-0:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package libgomp1:arm64. 718s Preparing to unpack .../012-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package libitm1:arm64. 718s Preparing to unpack .../013-libitm1_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libitm1:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package libasan8:arm64. 718s Preparing to unpack .../014-libasan8_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libasan8:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package liblsan0:arm64. 718s Preparing to unpack .../015-liblsan0_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking liblsan0:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package libtsan2:arm64. 718s Preparing to unpack .../016-libtsan2_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libtsan2:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package libubsan1:arm64. 718s Preparing to unpack .../017-libubsan1_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libubsan1:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package libhwasan0:arm64. 718s Preparing to unpack .../018-libhwasan0_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libhwasan0:arm64 (15.2.0-12ubuntu1) ... 718s Selecting previously unselected package libgcc-15-dev:arm64. 718s Preparing to unpack .../019-libgcc-15-dev_15.2.0-12ubuntu1_arm64.deb ... 718s Unpacking libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 719s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 719s Preparing to unpack .../020-gcc-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 719s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 719s Selecting previously unselected package gcc-15. 719s Preparing to unpack .../021-gcc-15_15.2.0-12ubuntu1_arm64.deb ... 719s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 719s Selecting previously unselected package gcc-aarch64-linux-gnu. 719s Preparing to unpack .../022-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 719s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 719s Selecting previously unselected package gcc. 719s Preparing to unpack .../023-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 719s Unpacking gcc (4:15.2.0-4ubuntu1) ... 719s Selecting previously unselected package libstdc++-15-dev:arm64. 719s Preparing to unpack .../024-libstdc++-15-dev_15.2.0-12ubuntu1_arm64.deb ... 719s Unpacking libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 719s Selecting previously unselected package g++-15-aarch64-linux-gnu. 719s Preparing to unpack .../025-g++-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 719s Unpacking g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 720s Selecting previously unselected package g++-15. 720s Preparing to unpack .../026-g++-15_15.2.0-12ubuntu1_arm64.deb ... 720s Unpacking g++-15 (15.2.0-12ubuntu1) ... 720s Selecting previously unselected package g++-aarch64-linux-gnu. 720s Preparing to unpack .../027-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 720s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 720s Selecting previously unselected package g++. 720s Preparing to unpack .../028-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 720s Unpacking g++ (4:15.2.0-4ubuntu1) ... 720s Selecting previously unselected package build-essential. 720s Preparing to unpack .../029-build-essential_12.12ubuntu2_arm64.deb ... 720s Unpacking build-essential (12.12ubuntu2) ... 720s Selecting previously unselected package dctrl-tools. 720s Preparing to unpack .../030-dctrl-tools_2.24-3build4_arm64.deb ... 720s Unpacking dctrl-tools (2.24-3build4) ... 720s Selecting previously unselected package fonts-dejavu-mono. 720s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8build1_all.deb ... 720s Unpacking fonts-dejavu-mono (2.37-8build1) ... 720s Selecting previously unselected package fonts-dejavu-core. 720s Preparing to unpack .../032-fonts-dejavu-core_2.37-8build1_all.deb ... 720s Unpacking fonts-dejavu-core (2.37-8build1) ... 720s Selecting previously unselected package fontconfig-config. 720s Preparing to unpack .../033-fontconfig-config_2.17.1-3ubuntu1_arm64.deb ... 720s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 720s Selecting previously unselected package libfontconfig1:arm64. 720s Preparing to unpack .../034-libfontconfig1_2.17.1-3ubuntu1_arm64.deb ... 720s Unpacking libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 720s Selecting previously unselected package fontconfig. 720s Preparing to unpack .../035-fontconfig_2.17.1-3ubuntu1_arm64.deb ... 720s Unpacking fontconfig (2.17.1-3ubuntu1) ... 720s Selecting previously unselected package fonts-font-awesome. 720s Preparing to unpack .../036-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 720s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 720s Selecting previously unselected package fonts-glyphicons-halflings. 720s Preparing to unpack .../037-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 720s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 720s Selecting previously unselected package fonts-mathjax. 720s Preparing to unpack .../038-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 720s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 720s Selecting previously unselected package libgfortran5:arm64. 720s Preparing to unpack .../039-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 720s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 720s Selecting previously unselected package libgfortran-15-dev:arm64. 720s Preparing to unpack .../040-libgfortran-15-dev_15.2.0-12ubuntu1_arm64.deb ... 720s Unpacking libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 721s Selecting previously unselected package gfortran-15-aarch64-linux-gnu. 721s Preparing to unpack .../041-gfortran-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 721s Unpacking gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 721s Selecting previously unselected package gfortran-15. 721s Preparing to unpack .../042-gfortran-15_15.2.0-12ubuntu1_arm64.deb ... 721s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 721s Selecting previously unselected package gfortran-aarch64-linux-gnu. 721s Preparing to unpack .../043-gfortran-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 721s Unpacking gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 721s Selecting previously unselected package gfortran. 721s Preparing to unpack .../044-gfortran_4%3a15.2.0-4ubuntu1_arm64.deb ... 721s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 721s Selecting previously unselected package icu-devtools. 721s Preparing to unpack .../045-icu-devtools_78.2-1ubuntu1_arm64.deb ... 721s Unpacking icu-devtools (78.2-1ubuntu1) ... 721s Selecting previously unselected package javascript-common. 721s Preparing to unpack .../046-javascript-common_12+nmu1build1_all.deb ... 721s Unpacking javascript-common (12+nmu1build1) ... 721s Selecting previously unselected package libsuitesparseconfig7:arm64. 721s Preparing to unpack .../047-libsuitesparseconfig7_1%3a7.12.1+dfsg-1_arm64.deb ... 721s Unpacking libsuitesparseconfig7:arm64 (1:7.12.1+dfsg-1) ... 721s Selecting previously unselected package libamd3:arm64. 721s Preparing to unpack .../048-libamd3_1%3a7.12.1+dfsg-1_arm64.deb ... 721s Unpacking libamd3:arm64 (1:7.12.1+dfsg-1) ... 721s Selecting previously unselected package libblas3:arm64. 721s Preparing to unpack .../049-libblas3_3.12.1-7ubuntu1_arm64.deb ... 721s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 721s Selecting previously unselected package libblas-dev:arm64. 721s Preparing to unpack .../050-libblas-dev_3.12.1-7ubuntu1_arm64.deb ... 721s Unpacking libblas-dev:arm64 (3.12.1-7ubuntu1) ... 721s Selecting previously unselected package libboost1.90-dev:arm64. 721s Preparing to unpack .../051-libboost1.90-dev_1.90.0-2ubuntu1_arm64.deb ... 721s Unpacking libboost1.90-dev:arm64 (1.90.0-2ubuntu1) ... 723s Selecting previously unselected package libboost-dev:arm64. 723s Preparing to unpack .../052-libboost-dev_1.90.0.0ubuntu3_arm64.deb ... 723s Unpacking libboost-dev:arm64 (1.90.0.0ubuntu3) ... 723s Selecting previously unselected package libbz2-dev:arm64. 723s Preparing to unpack .../053-libbz2-dev_1.0.8-6build2_arm64.deb ... 723s Unpacking libbz2-dev:arm64 (1.0.8-6build2) ... 723s Selecting previously unselected package libpixman-1-0:arm64. 723s Preparing to unpack .../054-libpixman-1-0_0.46.4-1_arm64.deb ... 723s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 723s Selecting previously unselected package libxcb-render0:arm64. 723s Preparing to unpack .../055-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 723s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 723s Selecting previously unselected package libxcb-shm0:arm64. 723s Preparing to unpack .../056-libxcb-shm0_1.17.0-2ubuntu1_arm64.deb ... 723s Unpacking libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 723s Selecting previously unselected package libxrender1:arm64. 723s Preparing to unpack .../057-libxrender1_1%3a0.9.12-1_arm64.deb ... 723s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 723s Selecting previously unselected package libcairo2:arm64. 723s Preparing to unpack .../058-libcairo2_1.18.4-3_arm64.deb ... 723s Unpacking libcairo2:arm64 (1.18.4-3) ... 723s Selecting previously unselected package libcolamd3:arm64. 723s Preparing to unpack .../059-libcolamd3_1%3a7.12.1+dfsg-1_arm64.deb ... 723s Unpacking libcolamd3:arm64 (1:7.12.1+dfsg-1) ... 723s Selecting previously unselected package libdatrie1:arm64. 723s Preparing to unpack .../060-libdatrie1_0.2.14-1_arm64.deb ... 723s Unpacking libdatrie1:arm64 (0.2.14-1) ... 723s Selecting previously unselected package libdeflate0:arm64. 723s Preparing to unpack .../061-libdeflate0_1.23-2build1_arm64.deb ... 723s Unpacking libdeflate0:arm64 (1.23-2build1) ... 723s Selecting previously unselected package libdeflate-dev:arm64. 723s Preparing to unpack .../062-libdeflate-dev_1.23-2build1_arm64.deb ... 723s Unpacking libdeflate-dev:arm64 (1.23-2build1) ... 723s Selecting previously unselected package libltdl7:arm64. 723s Preparing to unpack .../063-libltdl7_2.5.4-9_arm64.deb ... 723s Unpacking libltdl7:arm64 (2.5.4-9) ... 723s Selecting previously unselected package libglpk40:arm64. 723s Preparing to unpack .../064-libglpk40_5.0-2_arm64.deb ... 723s Unpacking libglpk40:arm64 (5.0-2) ... 723s Selecting previously unselected package libgraphite2-3:arm64. 723s Preparing to unpack .../065-libgraphite2-3_1.3.14-11ubuntu1_arm64.deb ... 723s Unpacking libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 723s Selecting previously unselected package libharfbuzz0b:arm64. 723s Preparing to unpack .../066-libharfbuzz0b_12.3.2-1_arm64.deb ... 723s Unpacking libharfbuzz0b:arm64 (12.3.2-1) ... 723s Selecting previously unselected package x11-common. 723s Preparing to unpack .../067-x11-common_1%3a7.7+24ubuntu1_all.deb ... 723s Unpacking x11-common (1:7.7+24ubuntu1) ... 723s Selecting previously unselected package libice6:arm64. 723s Preparing to unpack .../068-libice6_2%3a1.1.1-1build1_arm64.deb ... 723s Unpacking libice6:arm64 (2:1.1.1-1build1) ... 723s Selecting previously unselected package libicu-dev:arm64. 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libjs-microplugin.js (0.0.3+dfsg-2) ... 724s Selecting previously unselected package libjs-jquery-selectize.js. 724s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 724s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 724s Selecting previously unselected package libjs-jquery-ui. 724s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 724s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 725s Selecting previously unselected package libjs-json. 725s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 725s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 725s Selecting previously unselected package libjs-prettify. 725s Preparing to unpack .../088-libjs-prettify_2015.12.04+dfsg-3_all.deb ... 725s Unpacking libjs-prettify (2015.12.04+dfsg-3) ... 725s Selecting previously unselected package liblapack3:arm64. 725s Preparing to unpack .../089-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 725s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 725s Selecting previously unselected package liblapack-dev:arm64. 725s Preparing to unpack .../090-liblapack-dev_3.12.1-7ubuntu1_arm64.deb ... 725s Unpacking liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 725s Selecting previously unselected package liblerc4:arm64. 725s Preparing to unpack .../091-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 725s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 725s Selecting previously unselected package liblua5.4-0:arm64. 725s Preparing to unpack .../092-liblua5.4-0_5.4.8-1_arm64.deb ... 725s Unpacking liblua5.4-0:arm64 (5.4.8-1) ... 725s Selecting previously unselected package libncurses-dev:arm64. 725s Preparing to unpack .../093-libncurses-dev_6.6+20251231-1_arm64.deb ... 725s Unpacking libncurses-dev:arm64 (6.6+20251231-1) ... 725s Selecting previously unselected package libthai-data. 725s Preparing to unpack .../094-libthai-data_0.1.30-1_all.deb ... 725s Unpacking libthai-data (0.1.30-1) ... 725s Selecting previously unselected package libthai0:arm64. 725s Preparing to unpack .../095-libthai0_0.1.30-1_arm64.deb ... 725s Unpacking libthai0:arm64 (0.1.30-1) ... 725s Selecting previously unselected package libpango-1.0-0:arm64. 725s Preparing to unpack .../096-libpango-1.0-0_1.57.0-1_arm64.deb ... 725s Unpacking libpango-1.0-0:arm64 (1.57.0-1) ... 725s Selecting previously unselected package libpangoft2-1.0-0:arm64. 725s Preparing to unpack .../097-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 725s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 725s Selecting previously unselected package libpangocairo-1.0-0:arm64. 725s Preparing to unpack .../098-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 725s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 725s Selecting previously unselected package libpaper2:arm64. 725s Preparing to unpack .../099-libpaper2_2.2.5-0.3build1_arm64.deb ... 725s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 725s Selecting previously unselected package libpaper-utils. 725s Preparing to unpack .../100-libpaper-utils_2.2.5-0.3build1_arm64.deb ... 725s Unpacking libpaper-utils (2.2.5-0.3build1) ... 725s Selecting previously unselected package libpcre2-16-0:arm64. 725s Preparing to unpack .../101-libpcre2-16-0_10.46-1_arm64.deb ... 725s Unpacking libpcre2-16-0:arm64 (10.46-1) ... 725s Selecting previously unselected package libpcre2-32-0:arm64. 725s Preparing to unpack .../102-libpcre2-32-0_10.46-1_arm64.deb ... 725s Unpacking libpcre2-32-0:arm64 (10.46-1) ... 725s Selecting previously unselected package libpcre2-posix3:arm64. 725s Preparing to unpack .../103-libpcre2-posix3_10.46-1_arm64.deb ... 725s Unpacking libpcre2-posix3:arm64 (10.46-1) ... 725s Selecting previously unselected package libpcre2-dev:arm64. 726s Preparing to unpack .../104-libpcre2-dev_10.46-1_arm64.deb ... 726s Unpacking libpcre2-dev:arm64 (10.46-1) ... 726s Selecting previously unselected package libpkgconf3:arm64. 726s Preparing to unpack .../105-libpkgconf3_1.8.1-4build1_arm64.deb ... 726s Unpacking libpkgconf3:arm64 (1.8.1-4build1) ... 726s Selecting previously unselected package zlib1g-dev:arm64. 726s Preparing to unpack .../106-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 726s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 726s Selecting previously unselected package libpng-dev:arm64. 726s Preparing to unpack .../107-libpng-dev_1.6.54-1_arm64.deb ... 726s Unpacking libpng-dev:arm64 (1.6.54-1) ... 726s Selecting previously unselected package libreadline-dev:arm64. 726s Preparing to unpack .../108-libreadline-dev_8.3-3_arm64.deb ... 726s Unpacking libreadline-dev:arm64 (8.3-3) ... 726s Selecting previously unselected package libsharpyuv0:arm64. 726s Preparing to unpack .../109-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 726s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 726s Selecting previously unselected package libsm6:arm64. 726s Preparing to unpack .../110-libsm6_2%3a1.2.6-1build1_arm64.deb ... 726s Unpacking libsm6:arm64 (2:1.2.6-1build1) ... 726s Selecting previously unselected package libtcl8.6:arm64. 726s Preparing to unpack .../111-libtcl8.6_8.6.17+dfsg-1build1_arm64.deb ... 726s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1build1) ... 726s Selecting previously unselected package libjbig0:arm64. 726s Preparing to unpack .../112-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 726s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 726s Selecting previously unselected package libwebp7:arm64. 726s Preparing to unpack .../113-libwebp7_1.5.0-0.1build1_arm64.deb ... 726s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 726s Selecting previously unselected package libtiff6:arm64. 726s Preparing to unpack .../114-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 726s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 726s Selecting previously unselected package libxft2:arm64. 726s Preparing to unpack .../115-libxft2_2.3.6-1build2_arm64.deb ... 726s Unpacking libxft2:arm64 (2.3.6-1build2) ... 726s Selecting previously unselected package libxss1:arm64. 726s Preparing to unpack .../116-libxss1_1%3a1.2.3-1build4_arm64.deb ... 726s Unpacking libxss1:arm64 (1:1.2.3-1build4) ... 726s Selecting previously unselected package libtk8.6:arm64. 726s Preparing to unpack .../117-libtk8.6_8.6.17-1_arm64.deb ... 726s Unpacking libtk8.6:arm64 (8.6.17-1) ... 726s Selecting previously unselected package libxt6t64:arm64. 726s Preparing to unpack .../118-libxt6t64_1%3a1.2.1-1.3_arm64.deb ... 726s Unpacking libxt6t64:arm64 (1:1.2.1-1.3) ... 726s Selecting previously unselected package libzstd-dev:arm64. 726s Preparing to unpack .../119-libzstd-dev_1.5.7+dfsg-3_arm64.deb ... 726s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-3) ... 726s Selecting previously unselected package node-bootstrap-sass. 726s Preparing to unpack .../120-node-bootstrap-sass_3.4.3-2_all.deb ... 726s Unpacking node-bootstrap-sass (3.4.3-2) ... 726s Selecting previously unselected package node-html5shiv. 726s Preparing to unpack .../121-node-html5shiv_3.7.3+dfsg-5_all.deb ... 726s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 726s Selecting previously unselected package node-normalize.css. 726s Preparing to unpack .../122-node-normalize.css_8.0.1-5.1_all.deb ... 726s Unpacking node-normalize.css (8.0.1-5.1) ... 726s Selecting previously unselected package pandoc-data. 726s Preparing to unpack .../123-pandoc-data_3.1.11.1-3build1_all.deb ... 726s Unpacking pandoc-data (3.1.11.1-3build1) ... 727s Selecting previously unselected package pandoc. 727s Preparing to unpack .../124-pandoc_3.1.11.1+ds-4_arm64.deb ... 727s Unpacking pandoc (3.1.11.1+ds-4) ... 727s Selecting previously unselected package zip. 727s Preparing to unpack .../125-zip_3.0-15ubuntu3_arm64.deb ... 727s Unpacking zip (3.0-15ubuntu3) ... 728s Selecting previously unselected package unzip. 728s Preparing to unpack .../126-unzip_6.0-29ubuntu1_arm64.deb ... 728s Unpacking unzip (6.0-29ubuntu1) ... 728s Selecting previously unselected package xdg-utils. 728s Preparing to unpack .../127-xdg-utils_1.2.1-2ubuntu2_all.deb ... 728s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 728s Selecting previously unselected package r-base-core. 728s Preparing to unpack .../128-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 728s Unpacking r-base-core (4.5.2-1ubuntu2) ... 728s Selecting previously unselected package liblzma-dev:arm64. 728s Preparing to unpack .../129-liblzma-dev_5.8.2-2_arm64.deb ... 728s Unpacking liblzma-dev:arm64 (5.8.2-2) ... 728s Selecting previously unselected package pkgconf-bin. 728s Preparing to unpack .../130-pkgconf-bin_1.8.1-4build1_arm64.deb ... 728s Unpacking pkgconf-bin (1.8.1-4build1) ... 728s Selecting previously unselected package pkgconf:arm64. 728s Preparing to unpack .../131-pkgconf_1.8.1-4build1_arm64.deb ... 728s Unpacking pkgconf:arm64 (1.8.1-4build1) ... 728s Selecting previously unselected package libtirpc-dev:arm64. 728s Preparing to unpack .../132-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 728s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 728s Selecting previously unselected package r-base-dev. 728s Preparing to unpack .../133-r-base-dev_4.5.2-1ubuntu2_all.deb ... 728s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 728s Selecting previously unselected package pkg-r-autopkgtest. 728s Preparing to unpack .../134-pkg-r-autopkgtest_20250812_all.deb ... 728s Unpacking pkg-r-autopkgtest (20250812) ... 728s Selecting previously unselected package r-bioc-biocgenerics. 728s Preparing to unpack .../135-r-bioc-biocgenerics_0.52.0-2_all.deb ... 728s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 728s Selecting previously unselected package r-bioc-biobase. 728s Preparing to unpack .../136-r-bioc-biobase_2.66.0-2_arm64.deb ... 728s Unpacking r-bioc-biobase (2.66.0-2) ... 728s Selecting previously unselected package r-cran-formatr. 728s Preparing to unpack .../137-r-cran-formatr_1.14-2_all.deb ... 728s Unpacking r-cran-formatr (1.14-2) ... 728s Selecting previously unselected package r-cran-lambda.r. 728s Preparing to unpack .../138-r-cran-lambda.r_1.2.4-2build2_all.deb ... 728s Unpacking r-cran-lambda.r (1.2.4-2build2) ... 728s Selecting previously unselected package r-cran-futile.options. 729s Preparing to unpack .../139-r-cran-futile.options_1.0.1-3build2_all.deb ... 729s Unpacking r-cran-futile.options (1.0.1-3build2) ... 729s Selecting previously unselected package r-cran-futile.logger. 729s Preparing to unpack .../140-r-cran-futile.logger_1.4.3-4build2_all.deb ... 729s Unpacking r-cran-futile.logger (1.4.3-4build2) ... 729s Selecting previously unselected package r-cran-snow. 729s Preparing to unpack .../141-r-cran-snow_1%3a0.4.4-2build1_all.deb ... 729s Unpacking r-cran-snow (1:0.4.4-2build1) ... 729s Selecting previously unselected package r-cran-codetools. 729s Preparing to unpack .../142-r-cran-codetools_0.2-20-1build1_all.deb ... 729s Unpacking r-cran-codetools (0.2-20-1build1) ... 729s Selecting previously unselected package r-cran-bh. 729s Preparing to unpack .../143-r-cran-bh_1.84.0-1_all.deb ... 729s Unpacking r-cran-bh (1.84.0-1) ... 729s Selecting previously unselected package r-cran-cpp11. 729s Preparing to unpack .../144-r-cran-cpp11_0.5.3-1_all.deb ... 729s Unpacking r-cran-cpp11 (0.5.3-1) ... 729s Selecting previously unselected package r-bioc-biocparallel. 729s Preparing to unpack .../145-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 729s Unpacking r-bioc-biocparallel (1.40.0-2) ... 729s Selecting previously unselected package r-bioc-s4vectors. 729s Preparing to unpack .../146-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 729s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 729s Selecting previously unselected package r-bioc-iranges. 729s Preparing to unpack .../147-r-bioc-iranges_2.40.1-3_arm64.deb ... 729s Unpacking r-bioc-iranges (2.40.1-3) ... 729s Selecting previously unselected package r-bioc-zlibbioc. 729s Preparing to unpack .../148-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 729s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 729s Selecting previously unselected package r-bioc-xvector. 729s Preparing to unpack .../149-r-bioc-xvector_0.46.0-2_arm64.deb ... 729s Unpacking r-bioc-xvector (0.46.0-2) ... 729s Selecting previously unselected package r-cran-curl. 729s Preparing to unpack .../150-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 729s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 729s Selecting previously unselected package r-cran-jsonlite. 729s Preparing to unpack .../151-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 729s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 729s Selecting previously unselected package r-cran-mime. 729s Preparing to unpack .../152-r-cran-mime_0.12-2_arm64.deb ... 729s Unpacking r-cran-mime (0.12-2) ... 729s Selecting previously unselected package r-cran-sys. 729s Preparing to unpack .../153-r-cran-sys_3.4.3-1_arm64.deb ... 729s Unpacking r-cran-sys (3.4.3-1) ... 729s Selecting previously unselected package r-cran-askpass. 729s Preparing to unpack .../154-r-cran-askpass_1.2.1-1_arm64.deb ... 729s Unpacking r-cran-askpass (1.2.1-1) ... 729s Selecting previously unselected package r-cran-openssl. 729s Preparing to unpack .../155-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 729s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 729s Selecting previously unselected package r-cran-r6. 729s Preparing to unpack .../156-r-cran-r6_2.6.1-1_all.deb ... 729s Unpacking r-cran-r6 (2.6.1-1) ... 729s Selecting previously unselected package r-cran-httr. 729s Preparing to unpack .../157-r-cran-httr_1.4.7+dfsg-1_all.deb ... 729s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 729s Selecting previously unselected package r-bioc-ucsc.utils. 729s Preparing to unpack .../158-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 729s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 730s Selecting previously unselected package r-bioc-genomeinfodbdata. 730s Preparing to unpack .../159-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 730s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 730s Selecting previously unselected package r-bioc-genomeinfodb. 730s Preparing to unpack .../160-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 730s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 730s Selecting previously unselected package r-cran-crayon. 730s Preparing to unpack .../161-r-cran-crayon_1.5.3-1_all.deb ... 730s Unpacking r-cran-crayon (1.5.3-1) ... 730s Selecting previously unselected package r-bioc-biostrings. 730s Preparing to unpack .../162-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 730s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 730s Selecting previously unselected package r-cran-lattice. 730s Preparing to unpack .../163-r-cran-lattice_0.22-7-1_arm64.deb ... 730s Unpacking r-cran-lattice (0.22-7-1) ... 730s Selecting previously unselected package r-cran-matrix. 730s Preparing to unpack .../164-r-cran-matrix_1.7-4-1_arm64.deb ... 730s Unpacking r-cran-matrix (1.7-4-1) ... 730s Selecting previously unselected package r-cran-matrixstats. 730s Preparing to unpack .../165-r-cran-matrixstats_1.5.0-1_arm64.deb ... 730s Unpacking r-cran-matrixstats (1.5.0-1) ... 730s Selecting previously unselected package r-bioc-matrixgenerics. 730s Preparing to unpack .../166-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 730s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 730s Selecting previously unselected package r-cran-abind. 730s Preparing to unpack .../167-r-cran-abind_1.4-8-1build1_all.deb ... 730s Unpacking r-cran-abind (1.4-8-1build1) ... 730s Selecting previously unselected package r-bioc-s4arrays. 730s Preparing to unpack .../168-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 730s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 730s Selecting previously unselected package r-bioc-sparsearray. 730s Preparing to unpack .../169-r-bioc-sparsearray_1.6.2+dfsg-2_arm64.deb ... 730s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 730s Selecting previously unselected package r-bioc-delayedarray. 730s Preparing to unpack .../170-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 730s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 730s Selecting previously unselected package r-bioc-genomicranges. 730s Preparing to unpack .../171-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 730s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 730s Selecting previously unselected package r-bioc-summarizedexperiment. 730s Preparing to unpack .../172-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 730s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 730s Selecting previously unselected package r-cran-bitops. 730s Preparing to unpack .../173-r-cran-bitops_1.0-9-1_arm64.deb ... 730s Unpacking r-cran-bitops (1.0-9-1) ... 730s Selecting previously unselected package r-bioc-rhtslib. 731s Preparing to unpack .../174-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 731s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 731s Selecting previously unselected package r-bioc-rsamtools. 731s Preparing to unpack .../175-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 731s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 731s Selecting previously unselected package r-bioc-genomicalignments. 731s Preparing to unpack .../176-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 731s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 731s Selecting previously unselected package r-cran-mass. 731s Preparing to unpack .../177-r-cran-mass_7.3-65-1_arm64.deb ... 731s Unpacking r-cran-mass (7.3-65-1) ... 731s Selecting previously unselected package r-cran-pixmap. 731s Preparing to unpack .../178-r-cran-pixmap_0.4-14-1_all.deb ... 731s Unpacking r-cran-pixmap (0.4-14-1) ... 731s Selecting previously unselected package r-cran-sp. 731s Preparing to unpack .../179-r-cran-sp_1%3a2.2-0+dfsg-1_arm64.deb ... 731s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 731s Selecting previously unselected package r-cran-littler. 731s Preparing to unpack .../180-r-cran-littler_0.3.22-1_arm64.deb ... 731s Unpacking r-cran-littler (0.3.22-1) ... 731s Selecting previously unselected package r-cran-pkgkitten. 731s Preparing to unpack .../181-r-cran-pkgkitten_0.2.4-1_all.deb ... 731s Unpacking r-cran-pkgkitten (0.2.4-1) ... 731s Selecting previously unselected package r-cran-rcpp. 731s Preparing to unpack .../182-r-cran-rcpp_1.1.0-1_arm64.deb ... 731s Unpacking r-cran-rcpp (1.1.0-1) ... 731s Selecting previously unselected package r-cran-rcpparmadillo. 731s Preparing to unpack .../183-r-cran-rcpparmadillo_15.2.3-1-1_arm64.deb ... 731s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ... 731s Selecting previously unselected package r-cran-ade4. 731s Preparing to unpack .../184-r-cran-ade4_1.7-23-1_arm64.deb ... 731s Unpacking r-cran-ade4 (1.7-23-1) ... 731s Selecting previously unselected package r-cran-cli. 731s Preparing to unpack .../185-r-cran-cli_3.6.4-1_arm64.deb ... 731s Unpacking r-cran-cli (3.6.4-1) ... 731s Selecting previously unselected package r-cran-clipr. 731s Preparing to unpack .../186-r-cran-clipr_0.8.0-1build1_all.deb ... 731s Unpacking r-cran-clipr (0.8.0-1build1) ... 731s Selecting previously unselected package r-cran-rlang. 731s Preparing to unpack .../187-r-cran-rlang_1.1.5-3_arm64.deb ... 731s Unpacking r-cran-rlang (1.1.5-3) ... 732s Selecting previously unselected package r-cran-lifecycle. 732s Preparing to unpack .../188-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 732s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 732s Selecting previously unselected package r-cran-pkgconfig. 732s Preparing to unpack .../189-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 732s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 732s Selecting previously unselected package r-cran-glue. 732s Preparing to unpack .../190-r-cran-glue_1.8.0-1_arm64.deb ... 732s Unpacking r-cran-glue (1.8.0-1) ... 732s Selecting previously unselected package r-cran-vctrs. 732s Preparing to unpack .../191-r-cran-vctrs_0.6.5-1_arm64.deb ... 732s Unpacking r-cran-vctrs (0.6.5-1) ... 732s Selecting previously unselected package r-cran-hms. 732s Preparing to unpack .../192-r-cran-hms_1.1.4-1_all.deb ... 732s Unpacking r-cran-hms (1.1.4-1) ... 732s Selecting previously unselected package r-cran-fansi. 732s Preparing to unpack .../193-r-cran-fansi_1.0.6-2_arm64.deb ... 732s Unpacking r-cran-fansi (1.0.6-2) ... 732s Selecting previously unselected package r-cran-magrittr. 732s Preparing to unpack .../194-r-cran-magrittr_2.0.3-1_arm64.deb ... 732s Unpacking r-cran-magrittr (2.0.3-1) ... 732s Selecting previously unselected package r-cran-utf8. 732s Preparing to unpack .../195-r-cran-utf8_1.2.4-1_arm64.deb ... 732s Unpacking r-cran-utf8 (1.2.4-1) ... 732s Selecting previously unselected package r-cran-pillar. 732s Preparing to unpack .../196-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 732s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 732s Selecting previously unselected package r-cran-tibble. 732s Preparing to unpack .../197-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 732s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 732s Selecting previously unselected package r-cran-bit. 732s Preparing to unpack .../198-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 732s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 732s Selecting previously unselected package r-cran-bit64. 732s Preparing to unpack .../199-r-cran-bit64_4.6.0-1-4_arm64.deb ... 732s Unpacking r-cran-bit64 (4.6.0-1-4) ... 732s Selecting previously unselected package r-cran-withr. 732s Preparing to unpack .../200-r-cran-withr_3.0.2+dfsg-1_all.deb ... 732s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 732s Selecting previously unselected package r-cran-tidyselect. 732s Preparing to unpack .../201-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 732s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 732s Selecting previously unselected package r-cran-tzdb. 732s Preparing to unpack .../202-r-cran-tzdb_0.5.0-1_arm64.deb ... 732s Unpacking r-cran-tzdb (0.5.0-1) ... 732s Selecting previously unselected package r-cran-prettyunits. 732s Preparing to unpack .../203-r-cran-prettyunits_1.2.0-1_all.deb ... 732s Unpacking r-cran-prettyunits (1.2.0-1) ... 732s Selecting previously unselected package r-cran-progress. 732s Preparing to unpack .../204-r-cran-progress_1.2.3-1_all.deb ... 732s Unpacking r-cran-progress (1.2.3-1) ... 732s Selecting previously unselected package r-cran-vroom. 732s Preparing to unpack .../205-r-cran-vroom_1.7.0-1_arm64.deb ... 732s Unpacking r-cran-vroom (1.7.0-1) ... 733s Selecting previously unselected package r-cran-readr. 733s Preparing to unpack .../206-r-cran-readr_2.1.6-1_arm64.deb ... 733s Unpacking r-cran-readr (2.1.6-1) ... 733s Selecting previously unselected package r-cran-stringi. 733s Preparing to unpack .../207-r-cran-stringi_1.8.4-1build2_arm64.deb ... 733s Unpacking r-cran-stringi (1.8.4-1build2) ... 733s Selecting previously unselected package r-cran-yaml. 733s Preparing to unpack .../208-r-cran-yaml_2.3.10-1_arm64.deb ... 733s Unpacking r-cran-yaml (2.3.10-1) ... 733s Selecting previously unselected package r-cran-airr. 733s Preparing to unpack .../209-r-cran-airr_1.5.0+dfsg-1_all.deb ... 733s Unpacking r-cran-airr (1.5.0+dfsg-1) ... 733s Selecting previously unselected package r-cran-gtable. 733s Preparing to unpack .../210-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 733s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 733s Selecting previously unselected package r-cran-isoband. 733s Preparing to unpack .../211-r-cran-isoband_0.2.7-1_arm64.deb ... 733s Unpacking r-cran-isoband (0.2.7-1) ... 733s Selecting previously unselected package r-cran-s7. 733s Preparing to unpack .../212-r-cran-s7_0.2.0-1_arm64.deb ... 733s Unpacking r-cran-s7 (0.2.0-1) ... 733s Selecting previously unselected package r-cran-farver. 733s Preparing to unpack .../213-r-cran-farver_2.1.2-1_arm64.deb ... 733s Unpacking r-cran-farver (2.1.2-1) ... 733s Selecting previously unselected package r-cran-labeling. 733s Preparing to unpack .../214-r-cran-labeling_0.4.3-1_all.deb ... 733s Unpacking r-cran-labeling (0.4.3-1) ... 733s Selecting previously unselected package r-cran-rcolorbrewer. 733s Preparing to unpack .../215-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 733s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 733s Selecting previously unselected package r-cran-viridislite. 733s Preparing to unpack .../216-r-cran-viridislite_0.4.3-1_all.deb ... 733s Unpacking r-cran-viridislite (0.4.3-1) ... 733s Selecting previously unselected package r-cran-scales. 733s Preparing to unpack .../217-r-cran-scales_1.4.0-1_all.deb ... 733s Unpacking r-cran-scales (1.4.0-1) ... 733s Selecting previously unselected package r-cran-ggplot2. 733s Preparing to unpack .../218-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 733s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 733s Selecting previously unselected package r-cran-nlme. 733s Preparing to unpack .../219-r-cran-nlme_3.1.168-1_arm64.deb ... 733s Unpacking r-cran-nlme (3.1.168-1) ... 733s Selecting previously unselected package r-cran-digest. 733s Preparing to unpack .../220-r-cran-digest_0.6.39-1_arm64.deb ... 733s Unpacking r-cran-digest (0.6.39-1) ... 733s Selecting previously unselected package r-cran-ape. 733s Preparing to unpack .../221-r-cran-ape_5.8-1-1_arm64.deb ... 733s Unpacking r-cran-ape (5.8-1-1) ... 733s Selecting previously unselected package r-cran-generics. 734s Preparing to unpack .../222-r-cran-generics_0.1.4-1_all.deb ... 734s Unpacking r-cran-generics (0.1.4-1) ... 734s Selecting previously unselected package r-cran-dplyr. 734s Preparing to unpack .../223-r-cran-dplyr_1.1.4-4_arm64.deb ... 734s Unpacking r-cran-dplyr (1.1.4-4) ... 734s Selecting previously unselected package r-cran-igraph. 734s Preparing to unpack .../224-r-cran-igraph_2.1.4-1build1_arm64.deb ... 734s Unpacking r-cran-igraph (2.1.4-1build1) ... 734s Selecting previously unselected package r-cran-segmented. 734s Preparing to unpack .../225-r-cran-segmented_2.1-4-1_all.deb ... 734s Unpacking r-cran-segmented (2.1-4-1) ... 734s Selecting previously unselected package r-cran-seqinr. 734s Preparing to unpack .../226-r-cran-seqinr_4.2-36-1_arm64.deb ... 734s Unpacking r-cran-seqinr (4.2-36-1) ... 734s Selecting previously unselected package r-cran-purrr. 734s Preparing to unpack .../227-r-cran-purrr_1.0.4-1_arm64.deb ... 734s Unpacking r-cran-purrr (1.0.4-1) ... 734s Selecting previously unselected package r-cran-stringr. 734s Preparing to unpack .../228-r-cran-stringr_1.5.1-1_all.deb ... 734s Unpacking r-cran-stringr (1.5.1-1) ... 734s Selecting previously unselected package r-cran-tidyr. 734s Preparing to unpack .../229-r-cran-tidyr_1.3.1-1_arm64.deb ... 734s Unpacking r-cran-tidyr (1.3.1-1) ... 734s Selecting previously unselected package r-cran-alakazam. 734s Preparing to unpack .../230-r-cran-alakazam_1.3.0-1_arm64.deb ... 734s Unpacking r-cran-alakazam (1.3.0-1) ... 734s Selecting previously unselected package r-cran-base64enc. 734s Preparing to unpack .../231-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 734s Unpacking r-cran-base64enc (0.1-3-3build1) ... 734s Selecting previously unselected package r-cran-brio. 734s Preparing to unpack .../232-r-cran-brio_1.1.5-1_arm64.deb ... 734s Unpacking r-cran-brio (1.1.5-1) ... 734s Selecting previously unselected package r-cran-fastmap. 734s Preparing to unpack .../233-r-cran-fastmap_1.2.0-1_arm64.deb ... 734s Unpacking r-cran-fastmap (1.2.0-1) ... 734s Selecting previously unselected package r-cran-cachem. 734s Preparing to unpack .../234-r-cran-cachem_1.1.0-1_arm64.deb ... 734s Unpacking r-cran-cachem (1.1.0-1) ... 734s Selecting previously unselected package r-cran-htmltools. 734s Preparing to unpack .../235-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 734s Unpacking r-cran-htmltools (0.5.8.1-1) ... 734s Selecting previously unselected package r-cran-jquerylib. 734s Preparing to unpack .../236-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 734s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 734s Selecting previously unselected package r-cran-memoise. 734s Preparing to unpack .../237-r-cran-memoise_2.0.1-1build1_all.deb ... 734s Unpacking r-cran-memoise (2.0.1-1build1) ... 734s Selecting previously unselected package r-cran-fs. 734s Preparing to unpack .../238-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 734s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 734s Selecting previously unselected package r-cran-rappdirs. 734s Preparing to unpack .../239-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 734s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 735s Selecting previously unselected package r-cran-sass. 735s Preparing to unpack .../240-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 735s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 735s Selecting previously unselected package r-cran-bslib. 735s Preparing to unpack .../241-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 735s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 735s Selecting previously unselected package r-cran-ps. 735s Preparing to unpack .../242-r-cran-ps_1.9.0-1_arm64.deb ... 735s Unpacking r-cran-ps (1.9.0-1) ... 735s Selecting previously unselected package r-cran-processx. 735s Preparing to unpack .../243-r-cran-processx_3.8.6-1_arm64.deb ... 735s Unpacking r-cran-processx (3.8.6-1) ... 735s Selecting previously unselected package r-cran-callr. 735s Preparing to unpack .../244-r-cran-callr_3.7.6-1_all.deb ... 735s Unpacking r-cran-callr (3.7.6-1) ... 735s Selecting previously unselected package r-cran-commonmark. 735s Preparing to unpack .../245-r-cran-commonmark_1.9.5-1_arm64.deb ... 735s Unpacking r-cran-commonmark (1.9.5-1) ... 735s Selecting previously unselected package r-cran-desc. 735s Preparing to unpack .../246-r-cran-desc_1.4.3-1_all.deb ... 735s Unpacking r-cran-desc (1.4.3-1) ... 735s Selecting previously unselected package r-cran-diffobj. 735s Preparing to unpack .../247-r-cran-diffobj_0.3.5-1build1_arm64.deb ... 735s Unpacking r-cran-diffobj (0.3.5-1build1) ... 735s Selecting previously unselected package r-cran-diptest. 735s Preparing to unpack .../248-r-cran-diptest_0.77-1-1_arm64.deb ... 735s Unpacking r-cran-diptest (0.77-1-1) ... 735s Selecting previously unselected package r-cran-iterators. 735s Preparing to unpack .../249-r-cran-iterators_1.0.14-1build1_all.deb ... 735s Unpacking r-cran-iterators (1.0.14-1build1) ... 735s Selecting previously unselected package r-cran-foreach. 735s Preparing to unpack .../250-r-cran-foreach_1.5.2-1build1_all.deb ... 735s Unpacking r-cran-foreach (1.5.2-1build1) ... 735s Selecting previously unselected package r-cran-doparallel. 735s Preparing to unpack .../251-r-cran-doparallel_1.0.17-1build1_all.deb ... 735s Unpacking r-cran-doparallel (1.0.17-1build1) ... 735s Selecting previously unselected package r-cran-evaluate. 735s Preparing to unpack .../252-r-cran-evaluate_1.0.5-1_all.deb ... 735s Unpacking r-cran-evaluate (1.0.5-1) ... 735s Selecting previously unselected package r-cran-fontawesome. 735s Preparing to unpack .../253-r-cran-fontawesome_0.5.3-1_all.deb ... 735s Unpacking r-cran-fontawesome (0.5.3-1) ... 735s Selecting previously unselected package r-cran-xfun. 735s Preparing to unpack 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(2.23-26-1build1) ... 736s Selecting previously unselected package libjs-mathjax. 736s Preparing to unpack .../260-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 736s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 736s Selecting previously unselected package r-cran-knitr. 736s Preparing to unpack .../261-r-cran-knitr_1.51+dfsg-1_all.deb ... 736s Unpacking r-cran-knitr (1.51+dfsg-1) ... 736s Selecting previously unselected package r-cran-lazyeval. 736s Preparing to unpack .../262-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 736s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 736s Selecting previously unselected package r-cran-pkgbuild. 736s Preparing to unpack .../263-r-cran-pkgbuild_1.4.8-1_all.deb ... 736s Unpacking r-cran-pkgbuild (1.4.8-1) ... 736s Selecting previously unselected package r-cran-rprojroot. 736s Preparing to unpack .../264-r-cran-rprojroot_2.1.1-1_all.deb ... 736s Unpacking r-cran-rprojroot (2.1.1-1) ... 736s Selecting previously unselected package r-cran-pkgload. 736s 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/usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 738s Setting up cpp-15 (15.2.0-12ubuntu1) ... 738s Setting up libtiff6:arm64 (4.7.0-3ubuntu3) ... 738s Setting up cpp (4:15.2.0-4ubuntu1) ... 738s Setting up libc6-dev:arm64 (2.42-2ubuntu4) ... 738s Setting up libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 738s Setting up libsm6:arm64 (2:1.2.6-1build1) ... 738s Setting up libicu-dev:arm64 (78.2-1ubuntu1) ... 738s Setting up libbz2-dev:arm64 (1.0.8-6build2) ... 738s Setting up fontconfig (2.17.1-3ubuntu1) ... 740s Regenerating fonts cache... done. 740s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu3) ... 740s Setting up libxft2:arm64 (2.3.6-1build2) ... 740s Setting up libncurses-dev:arm64 (6.6+20251231-1) ... 740s Setting up gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 740s Setting up libpcre2-dev:arm64 (10.46-1) ... 740s Setting up libtk8.6:arm64 (8.6.17-1) ... 740s Setting up libpango-1.0-0:arm64 (1.57.0-1) ... 740s Setting up libreadline-dev:arm64 (8.3-3) ... 740s Setting up libcairo2:arm64 (1.18.4-3) ... 740s Setting up gcc-15 (15.2.0-12ubuntu1) ... 740s Setting up libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 740s Setting up gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 740s Setting up g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 740s Setting up libxt6t64:arm64 (1:1.2.1-1.3) ... 740s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 740s Setting up libboost1.90-dev:arm64 (1.90.0-2ubuntu1) ... 740s Setting up libboost-dev:arm64 (1.90.0.0ubuntu3) ... 740s Setting up libpangoft2-1.0-0:arm64 (1.57.0-1) ... 740s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 740s Setting up g++-15 (15.2.0-12ubuntu1) ... 740s Setting up gfortran-15 (15.2.0-12ubuntu1) ... 740s Setting up libpangocairo-1.0-0:arm64 (1.57.0-1) ... 740s Setting up gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 740s Setting up libpng-dev:arm64 (1.6.54-1) ... 740s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 740s Setting up gcc (4:15.2.0-4ubuntu1) ... 740s Setting up r-base-core (4.5.2-1ubuntu2) ... 740s Creating config file /etc/R/Renviron with new version 740s Setting up r-cran-crayon (1.5.3-1) ... 740s Setting up r-cran-labeling (0.4.3-1) ... 740s Setting up r-cran-sourcetools (0.1.7-1-1) ... 740s Setting up r-cran-futile.options (1.0.1-3build2) ... 740s Setting up r-cran-lattice (0.22-7-1) ... 740s Setting up r-cran-ps (1.9.0-1) ... 740s Setting up r-cran-nlme (3.1.168-1) ... 740s Setting up r-cran-farver (2.1.2-1) ... 740s Setting up r-cran-formatr (1.14-2) ... 740s Setting up r-cran-viridislite (0.4.3-1) ... 740s Setting up r-cran-pixmap (0.4-14-1) ... 740s Setting up g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 740s Setting up gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 740s Setting up r-cran-lazyeval (0.2.2-1build2) ... 740s Setting up r-cran-clipr (0.8.0-1build1) ... 740s Setting up r-cran-commonmark (1.9.5-1) ... 740s Setting up r-cran-r6 (2.6.1-1) ... 740s Setting up r-cran-pkgkitten (0.2.4-1) ... 740s Setting up r-cran-magrittr (2.0.3-1) ... 740s Setting up r-cran-rappdirs (0.3.3-1build1) ... 740s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 740s Setting up r-cran-littler (0.3.22-1) ... 740s Setting up r-cran-bh (1.84.0-1) ... 740s Setting up r-cran-fs (1.6.5+dfsg-1) ... 740s Setting up r-cran-rcpp (1.1.0-1) ... 740s Setting up r-cran-curl (7.0.0+dfsg-1) ... 740s Setting up r-cran-codetools (0.2-20-1build1) ... 740s Setting up r-cran-brio (1.1.5-1) ... 740s Setting up r-cran-diffobj (0.3.5-1build1) ... 740s Setting up r-cran-diptest (0.77-1-1) ... 740s Setting up r-bioc-biocgenerics (0.52.0-2) ... 740s Setting up r-cran-rlang (1.1.5-3) ... 740s Setting up r-cran-matrixstats (1.5.0-1) ... 740s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 740s Setting up r-cran-xfun (0.55+dfsg-1) ... 740s Setting up r-cran-sys (3.4.3-1) ... 740s Setting up r-cran-withr (3.0.2+dfsg-1) ... 740s Setting up r-cran-processx (3.8.6-1) ... 740s Setting up r-cran-mime (0.12-2) ... 740s Setting up r-cran-praise (1.0.0-4build2) ... 740s Setting up r-cran-generics (0.1.4-1) ... 740s Setting up r-cran-base64enc (0.1-3-3build1) ... 740s Setting up r-cran-iterators (1.0.14-1build1) ... 740s Setting up r-cran-abind (1.4-8-1build1) ... 740s Setting up r-cran-digest (0.6.39-1) ... 740s Setting up r-cran-ape (5.8-1-1) ... 740s Setting up r-cran-yaml (2.3.10-1) ... 740s Setting up r-cran-lambda.r (1.2.4-2build2) ... 740s Setting up r-cran-evaluate (1.0.5-1) ... 740s Setting up r-cran-highr (0.11+dfsg-1) ... 740s Setting up r-cran-foreach (1.5.2-1build1) ... 740s Setting up r-cran-prettyunits (1.2.0-1) ... 740s Setting up r-cran-fansi (1.0.6-2) ... 740s Setting up r-cran-mass (7.3-65-1) ... 740s Setting up r-cran-snow (1:0.4.4-2build1) ... 740s Setting up r-cran-glue (1.8.0-1) ... 740s Setting up r-cran-bit (4.6.0+dfsg-1) ... 740s Setting up r-cran-xtable (1:1.8-4-2build1) ... 740s Setting up r-cran-cli (3.6.4-1) ... 740s Setting up gfortran (4:15.2.0-4ubuntu1) ... 740s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 740s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 740s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 740s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 740s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ... 740s Setting up r-cran-bitops (1.0-9-1) ... 740s Setting up r-cran-rprojroot (2.1.1-1) ... 740s Setting up r-cran-bit64 (4.6.0-1-4) ... 740s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 740s Setting up r-cran-askpass (1.2.1-1) ... 740s Setting up r-cran-fastmap (1.2.0-1) ... 740s Setting up r-bioc-biobase (2.66.0-2) ... 740s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 740s Setting up r-cran-pkgconfig (2.0.3-2build2) ... 740s Setting up r-cran-sp (1:2.2-0+dfsg-1) ... 740s Setting up r-cran-utf8 (1.2.4-1) ... 740s Setting up r-cran-stringi (1.8.4-1build2) ... 740s Setting up r-cran-s7 (0.2.0-1) ... 740s Setting up r-cran-cpp11 (0.5.3-1) ... 740s Setting up r-cran-segmented (2.1-4-1) ... 740s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ... 740s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 740s Setting up r-cran-isoband (0.2.7-1) ... 740s Setting up r-cran-futile.logger (1.4.3-4build2) ... 740s Setting up r-cran-waldo (0.6.2-1) ... 740s Setting up r-cran-scales (1.4.0-1) ... 740s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 740s Setting up r-cran-later (1.4.1+dfsg-1) ... 740s Setting up r-cran-matrix (1.7-4-1) ... 740s Setting up r-cran-doparallel (1.0.17-1build1) ... 740s Setting up r-cran-htmltools (0.5.8.1-1) ... 740s Setting up r-cran-tinytex (0.58-1) ... 740s Setting up r-cran-kernsmooth (2.23-26-1build1) ... 740s Setting up r-cran-knitr (1.51+dfsg-1) ... 740s Setting up g++ (4:15.2.0-4ubuntu1) ... 740s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 740s Setting up r-cran-cachem (1.1.0-1) ... 740s Setting up r-cran-sass (0.4.9+dfsg-1) ... 740s Setting up build-essential (12.12ubuntu2) ... 740s Setting up r-cran-rcpparmadillo (15.2.3-1-1) ... 740s Setting up r-bioc-iranges (2.40.1-3) ... 740s Setting up r-cran-tzdb (0.5.0-1) ... 740s Setting up r-cran-vctrs (0.6.5-1) ... 740s Setting up r-cran-pillar (1.11.1+dfsg-1) ... 740s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 740s Setting up r-base-dev (4.5.2-1ubuntu2) ... 740s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 740s Setting up r-cran-stringr (1.5.1-1) ... 740s Setting up r-bioc-biocparallel (1.40.0-2) ... 740s Setting up r-cran-callr (3.7.6-1) ... 740s Setting up r-cran-ggplot2 (4.0.2+dfsg-1) ... 740s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 740s Setting up r-cran-desc (1.4.3-1) ... 740s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 740s Setting up r-cran-fontawesome (0.5.3-1) ... 740s Setting up r-cran-igraph (2.1.4-1build1) ... 740s Setting up r-cran-ade4 (1.7-23-1) ... 740s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ... 740s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 740s Setting up r-cran-httr (1.4.7+dfsg-1) ... 740s Setting up r-cran-hms (1.1.4-1) ... 740s Setting up r-cran-memoise (2.0.1-1build1) ... 740s Setting up r-cran-promises (1.3.2+dfsg-1) ... 740s Setting up r-cran-purrr (1.0.4-1) ... 740s Setting up pkg-r-autopkgtest (20250812) ... 740s Setting up r-bioc-xvector (0.46.0-2) ... 740s Setting up r-cran-pkgbuild (1.4.8-1) ... 740s Setting up r-cran-dplyr (1.1.4-4) ... 740s Setting up r-cran-progress (1.2.3-1) ... 740s Setting up r-cran-pkgload (1.4.1-1) ... 740s Setting up r-cran-vroom (1.7.0-1) ... 740s Setting up r-cran-seqinr (4.2-36-1) ... 740s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 740s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 740s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 740s Setting up r-cran-testthat (3.2.3-1) ... 740s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 740s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 740s Setting up r-cran-readr (2.1.6-1) ... 740s Setting up r-cran-tidyr (1.3.1-1) ... 740s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 740s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 740s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 740s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 740s Setting up r-cran-airr (1.5.0+dfsg-1) ... 740s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 740s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 740s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 740s Setting up r-bioc-genomicalignments (1.42.0-2) ... 740s Setting up r-cran-alakazam (1.3.0-1) ... 740s Setting up r-cran-shazam (1.2.0-1) ... 740s Processing triggers for libc-bin (2.42-2ubuntu4) ... 740s Processing triggers for man-db (2.13.1-1build1) ... 741s Processing triggers for install-info (7.2-5) ... 742s autopkgtest [00:21:48]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 742s autopkgtest [00:21:48]: test pkg-r-autopkgtest: [----------------------- 742s Test: Try to load the R library shazam 743s 743s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 743s Copyright (C) 2025 The R Foundation for Statistical Computing 743s Platform: aarch64-unknown-linux-gnu 743s 743s R is free software and comes with ABSOLUTELY NO WARRANTY. 743s You are welcome to redistribute it under certain conditions. 743s Type 'license()' or 'licence()' for distribution details. 743s 743s R is a collaborative project with many contributors. 743s Type 'contributors()' for more information and 743s 'citation()' on how to cite R or R packages in publications. 743s 743s Type 'demo()' for some demos, 'help()' for on-line help, or 743s 'help.start()' for an HTML browser interface to help. 743s Type 'q()' to quit R. 743s 743s > library('shazam') 743s Loading required package: ggplot2 751s > 751s 751s 751s To cite the SHazaM package in publications, please use: 751s 751s Gupta N, Vander Heiden J, Uduman M, Gadala-Maria D, Yaari G, 751s Kleinstein S (2015). “Change-O: a toolkit for analyzing large-scale B 751s cell immunoglobulin repertoire sequencing data.” _Bioinformatics_, 751s 1-3. doi:10.1093/bioinformatics/btv359 751s . 751s 751s To cite the selection analysis methods, please use: 751s 751s Yaari G, Uduman M, Kleinstein S (2012). “Quantifying selection in 751s high-throughput Immunoglobulin sequencing data sets.” _Nucleic acids 751s research_, *40*(17), e134. doi:10.1093/nar/gks457 751s . 751s 751s To cite the HH_S5F model and the targeting model generation methods, 751s please use: 751s 751s Yaari G, Vander Heiden J, Uduman M, Gadala-Maria D, Gupta N, Stern J, 751s O'Connor K, Hafler D, Lasserson U, Vigneault F, Kleinstein S (2013). 751s “Models of somatic hypermutation targeting and substitution based on 751s synonymous mutations from high-throughput immunoglobulin sequencing 751s data.” _Frontiers in Immunology_, *4*(358), 1-11. 751s doi:10.3389/fimmu.2013.00358 751s . 751s 751s To cite the HKL_S1F, HKL_S5F, MK_RS1NF, and MK_RS5NF models, please 751s use: 751s 751s Cui A, Di Niro R, Vander Heiden J, Briggs A, Adams K, Gilbert T, 751s O'Connor K, Vigneault F, Shlomchik M, Kleinstein S (2016). “A Model 751s of Somatic Hypermutation Targeting in Mice Based on High-Throughput 751s Ig Sequencing Data.” _The Journal of Immunology_, *197*(9), 751s 3566-3574. doi:10.4049/jimmunol.1502263 751s . 751s 751s To see these entries in BibTeX format, use 'format(, 751s bibtex=TRUE)', or 'toBibtex(.)'. 751s autopkgtest [00:21:57]: test pkg-r-autopkgtest: -----------------------] 752s autopkgtest [00:21:58]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 752s pkg-r-autopkgtest PASS 752s autopkgtest [00:21:58]: @@@@@@@@@@@@@@@@@@@@ summary 752s pkg-r-autopkgtest PASS