0s autopkgtest [16:36:10]: starting date and time: 2025-11-17 16:36:10+0000
  0s autopkgtest [16:36:10]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [16:36:10]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.786e4cz3/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-reformulas --apt-upgrade r-cran-glmmtmb --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-reformulas/0.4.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-3.secgroup --name adt-resolute-arm64-r-cran-glmmtmb-20251117-163609-juju-7f2275-prod-proposed-migration-environment-20-67211aa4-08bc-4f96-92ec-35a3ae57e13a --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  3s Creating nova instance adt-resolute-arm64-r-cran-glmmtmb-20251117-163609-juju-7f2275-prod-proposed-migration-environment-20-67211aa4-08bc-4f96-92ec-35a3ae57e13a from image adt/ubuntu-resolute-arm64-server-20251117.img (UUID 1cd33fbb-18df-4c5a-b8f0-2dcb25269485)...
 76s autopkgtest [16:37:26]: testbed dpkg architecture: arm64
 76s autopkgtest [16:37:26]: testbed apt version: 3.1.11
 77s autopkgtest [16:37:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 77s autopkgtest [16:37:27]: testbed release detected to be: None
 78s autopkgtest [16:37:28]: updating testbed package index (apt update)
 78s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB]
 79s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 79s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 79s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 79s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB]
 79s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B]
 79s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [81.5 kB]
 79s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [839 kB]
 79s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [149 kB]
 79s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [3084 B]
 79s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [107 kB]
 79s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [324 B]
 79s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [557 kB]
 79s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [17.3 kB]
 79s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [12.5 kB]
 79s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [576 B]
 82s Fetched 1888 kB in 1s (1419 kB/s)
 84s Reading package lists...
 85s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 85s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 85s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 85s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 87s Reading package lists...
 87s Reading package lists...
 88s Building dependency tree...
 88s Reading state information...
 88s Calculating upgrade...
 89s The following packages will be upgraded:
 89s   usbutils
 89s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 89s Need to get 81.7 kB of archives.
 89s After this operation, 0 B of additional disk space will be used.
 89s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 usbutils arm64 1:019-1 [81.7 kB]
 90s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 90s Fetched 81.7 kB in 0s (266 kB/s)
 91s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 88137 files and directories currently installed.)
 91s Preparing to unpack .../usbutils_1%3a019-1_arm64.deb ...
 91s Unpacking usbutils (1:019-1) over (1:018-2) ...
 91s Setting up usbutils (1:019-1) ...
 91s Processing triggers for man-db (2.13.1-1) ...
 94s autopkgtest [16:37:44]: upgrading testbed (apt dist-upgrade and autopurge)
 94s Reading package lists...
 95s Building dependency tree...
 95s Reading state information...
 95s Calculating upgrade...
 97s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 97s Reading package lists...
 97s Building dependency tree...
 97s Reading state information...
 98s Solving dependencies...
 98s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
102s autopkgtest [16:37:52]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 09:50:31 UTC 2025
102s autopkgtest [16:37:52]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-glmmtmb
106s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-glmmtmb 1.1.10+dfsg-1build2 (dsc) [2724 B]
106s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-glmmtmb 1.1.10+dfsg-1build2 (tar) [4589 kB]
106s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-glmmtmb 1.1.10+dfsg-1build2 (diff) [15.2 kB]
106s gpgv: Signature made Sat Mar 22 18:05:17 2025 UTC
106s gpgv:                using RSA key 5C7ABEA20F8630459CC8C8B5E27F2CF8458C2FA4
106s gpgv: Can't check signature: No public key
106s dpkg-source: warning: cannot verify inline signature for ./r-cran-glmmtmb_1.1.10+dfsg-1build2.dsc: no acceptable signature found
107s autopkgtest [16:37:57]: testing package r-cran-glmmtmb version 1.1.10+dfsg-1build2
107s autopkgtest [16:37:57]: build not needed
108s autopkgtest [16:37:58]: test run-unit-test: preparing testbed
109s Reading package lists...
110s Building dependency tree...
110s Reading state information...
110s Solving dependencies...
111s The following NEW packages will be installed:
111s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
111s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax
111s   javascript-common libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1
111s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0
111s   libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3
111s   libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables
111s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax
111s   libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify
111s   libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 liblerc4
111s   liblua5.4-0 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
111s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
111s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
111s   libxft2 libxrender1 libxss1 libxt6t64 node-bootstrap-sass node-html5shiv
111s   node-normalize.css pandoc pandoc-data r-base-core r-cran-abind
111s   r-cran-backports r-cran-base64enc r-cran-bbmle r-cran-bdsmatrix r-cran-bit
111s   r-cran-bit64 r-cran-blme r-cran-boot r-cran-brio r-cran-broom
111s   r-cran-broom.mixed r-cran-bslib r-cran-cachem r-cran-callr r-cran-car
111s   r-cran-cardata r-cran-caret r-cran-cellranger r-cran-class r-cran-cli
111s   r-cran-clipr r-cran-clock r-cran-coda r-cran-codetools r-cran-colorspace
111s   r-cran-commonmark r-cran-conquer r-cran-cowplot r-cran-cpp11 r-cran-crayon
111s   r-cran-curl r-cran-data.table r-cran-dbi r-cran-deriv r-cran-desc
111s   r-cran-diagram r-cran-diffobj r-cran-digest r-cran-doby r-cran-dplyr
111s   r-cran-e1071 r-cran-effects r-cran-ellipsis r-cran-emmeans
111s   r-cran-estimability r-cran-evaluate r-cran-fansi r-cran-farver
111s   r-cran-fastmap r-cran-fontawesome r-cran-forcats r-cran-foreach
111s   r-cran-foreign r-cran-formula r-cran-fs r-cran-furrr r-cran-future
111s   r-cran-future.apply r-cran-generics r-cran-ggplot2 r-cran-glmmtmb
111s   r-cran-globals r-cran-glue r-cran-gower r-cran-gtable r-cran-hardhat
111s   r-cran-haven r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv
111s   r-cran-insight r-cran-ipred r-cran-isoband r-cran-iterators r-cran-jquerylib
111s   r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later
111s   r-cran-lattice r-cran-lava r-cran-lifecycle r-cran-listenv r-cran-littler
111s   r-cran-lme4 r-cran-lubridate r-cran-magrittr r-cran-mass r-cran-matrix
111s   r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-mgcv
111s   r-cran-microbenchmark r-cran-mime r-cran-minqa r-cran-mitools r-cran-mlmrev
111s   r-cran-modelmetrics r-cran-modelr r-cran-multcomp r-cran-munsell
111s   r-cran-mvtnorm r-cran-nlme r-cran-nloptr r-cran-nnet r-cran-numderiv
111s   r-cran-openxlsx r-cran-parallelly r-cran-pbkrtest r-cran-pillar
111s   r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plyr
111s   r-cran-png r-cran-praise r-cran-prettyunits r-cran-proc r-cran-processx
111s   r-cran-prodlim r-cran-progress r-cran-progressr r-cran-promises r-cran-proxy
111s   r-cran-ps r-cran-pscl r-cran-purrr r-cran-quantreg r-cran-r.methodss3
111s   r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rbibutils
111s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcppeigen
111s   r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes r-cran-reformulas
111s   r-cran-rematch r-cran-reshape2 r-cran-rio r-cran-rlang r-cran-rmarkdown
111s   r-cran-rpart r-cran-rprojroot r-cran-sandwich r-cran-sass r-cran-scales
111s   r-cran-shape r-cran-shiny r-cran-sourcetools r-cran-sparsem
111s   r-cran-sparsevctrs r-cran-squarem r-cran-statmod r-cran-stringi
111s   r-cran-stringr r-cran-survey r-cran-survival r-cran-testthat r-cran-th.data
111s   r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange
111s   r-cran-timedate r-cran-tinytex r-cran-tmb r-cran-tzdb r-cran-utf8
111s   r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-withr
111s   r-cran-writexl r-cran-xfun r-cran-xtable r-cran-yaml r-cran-zip r-cran-zoo
111s   unzip x11-common xdg-utils zip
112s 0 upgraded, 263 newly installed, 0 to remove and 0 not upgraded.
112s Need to get 247 MB of archives.
112s After this operation, 653 MB of additional disk space will be used.
112s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
112s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
112s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.15.0-2.3ubuntu1 [38.1 kB]
112s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.15.0-2.3ubuntu1 [144 kB]
113s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.15.0-2.3ubuntu1 [191 kB]
113s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
113s Get:7 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
113s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
113s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1 [4828 B]
113s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7 [181 kB]
113s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB]
113s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2build1 [18.1 kB]
113s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2build1 [6234 B]
113s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB]
113s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-1build1 [592 kB]
113s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.13-4 [19.1 kB]
113s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB]
113s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-7ubuntu1 [450 kB]
114s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-7ubuntu1 [147 kB]
114s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
114s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.1.0-1 [523 kB]
114s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
114s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
114s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB]
114s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
114s Get:26 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
114s Get:27 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
114s Get:28 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
114s Get:29 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4 [132 kB]
114s Get:30 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
114s Get:31 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
114s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
114s Get:33 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
114s Get:34 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
114s Get:35 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
114s Get:36 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
114s Get:37 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
114s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
114s Get:39 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
114s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7 [2300 kB]
114s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
114s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB]
114s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
114s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
114s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.56.3-2 [237 kB]
114s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.56.3-2 [50.2 kB]
114s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.56.3-2 [27.7 kB]
114s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
114s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
114s Get:50 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
114s Get:51 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB]
114s Get:52 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [1024 kB]
114s Get:53 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
114s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
114s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB]
114s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
114s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
114s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB]
114s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB]
115s Get:60 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB]
115s Get:61 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
115s Get:62 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB]
115s Get:63 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
115s Get:64 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB]
116s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu2 [175 kB]
116s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-28ubuntu7 [176 kB]
116s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
116s Get:68 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1 [28.6 MB]
117s Get:69 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB]
117s Get:70 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-backports arm64 1.5.0-2 [121 kB]
117s Get:71 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB]
117s Get:72 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-numderiv all 2016.8-1.1-3 [115 kB]
117s Get:73 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB]
117s Get:74 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB]
117s Get:75 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bdsmatrix arm64 1.3-7-1 [300 kB]
117s Get:76 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB]
117s Get:77 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mvtnorm arm64 1.3-3-1 [921 kB]
117s Get:78 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bbmle all 1.0.25.1-1 [854 kB]
117s Get:79 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB]
117s Get:80 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit64 arm64 4.6.0-1-4 [495 kB]
117s Get:81 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-boot all 1.3-32-1 [636 kB]
117s Get:82 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB]
117s Get:83 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.21-2 [83.6 kB]
117s Get:84 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
117s Get:85 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB]
117s Get:86 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-minqa arm64 1.2.8-1 [112 kB]
117s Get:87 http://ftpmaster.internal/ubuntu resolute/universe arm64 libnlopt0 arm64 2.7.1-7ubuntu1 [177 kB]
117s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nloptr arm64 2.2.1-2 [250 kB]
117s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB]
117s Get:90 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rdpack all 2.6.3-1 [636 kB]
117s Get:91 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-reformulas all 0.4.2-1 [132 kB]
117s Get:92 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB]
117s Get:93 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB]
117s Get:94 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lme4 arm64 1.1-37-1 [4121 kB]
117s Get:95 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-blme all 1.0-6-1 [429 kB]
117s Get:96 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB]
117s Get:97 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB]
118s Get:98 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB]
118s Get:99 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB]
118s Get:100 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB]
118s Get:101 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
118s Get:102 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB]
118s Get:103 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB]
118s Get:104 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB]
118s Get:105 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
119s Get:106 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB]
119s Get:107 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB]
119s Get:108 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
119s Get:109 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB]
119s Get:110 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
119s Get:111 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB]
119s Get:112 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB]
119s Get:113 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB]
119s Get:114 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB]
119s Get:115 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB]
119s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.2-1 [233 kB]
119s Get:117 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB]
119s Get:118 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-broom all 1.0.7+dfsg-1 [1802 kB]
119s Get:119 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-coda all 0.19-4.1-1 [321 kB]
119s Get:120 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ellipsis arm64 0.3.2-2 [35.5 kB]
119s Get:121 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-forcats all 1.0.1-1 [368 kB]
119s Get:122 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB]
119s Get:123 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB]
119s Get:124 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-globals all 0.16.3-1 [120 kB]
119s Get:125 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB]
119s Get:126 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-parallelly arm64 1.42.0-1 [540 kB]
119s Get:127 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future all 1.34.0+dfsg-1 [646 kB]
119s Get:128 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-furrr all 0.3.1-1 [753 kB]
119s Get:129 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-broom.mixed all 0.2.9.6-3 [5324 kB]
120s Get:130 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB]
120s Get:131 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB]
120s Get:132 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB]
120s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
120s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB]
120s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB]
120s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB]
120s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB]
120s Get:138 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB]
120s Get:139 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB]
120s Get:140 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
120s Get:141 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB]
120s Get:142 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB]
120s Get:143 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB]
120s Get:144 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cardata all 3.0.5-1 [1819 kB]
120s Get:145 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formula all 1.2-5-1 [158 kB]
120s Get:146 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mgcv arm64 1.9-3-1 [3324 kB]
121s Get:147 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nnet arm64 7.3-20-1 [113 kB]
121s Get:148 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
121s Get:149 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB]
121s Get:150 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB]
121s Get:151 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB]
121s Get:152 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB]
121s Get:153 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB]
121s Get:154 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
121s Get:155 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB]
121s Get:156 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.3.0-1 [603 kB]
121s Get:157 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
122s Get:158 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
122s Get:159 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-deriv all 4.2.0-1 [154 kB]
122s Get:160 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-modelr all 0.1.11-1 [195 kB]
122s Get:161 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-microbenchmark arm64 1.5.0-1 [67.5 kB]
122s Get:162 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-doby all 4.7.0-1 [4830 kB]
122s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB]
122s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB]
122s Get:165 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
122s Get:166 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB]
122s Get:167 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
123s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.50+dfsg-1 [840 kB]
123s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pbkrtest all 0.5.5-1 [217 kB]
123s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sparsem arm64 1.84-2-1 [812 kB]
123s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrixmodels all 0.5-4-1 [351 kB]
123s Get:172 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB]
124s Get:173 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB]
124s Get:174 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpparmadillo arm64 15.0.2-2-1 [907 kB]
124s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-class arm64 7.3-23-1 [90.5 kB]
124s Get:176 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-proxy arm64 0.4-27-1 [181 kB]
124s Get:177 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-e1071 arm64 1.7-16-1 [563 kB]
124s Get:178 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB]
124s Get:179 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB]
124s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-data.table arm64 1.17.0+dfsg-1 [2129 kB]
125s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-modelmetrics arm64 1.2.2.2-1build1 [121 kB]
125s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB]
125s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-proc arm64 1.18.5-1 [963 kB]
125s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tzdb arm64 0.5.0-1 [530 kB]
125s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clock arm64 0.7.2-1 [1829 kB]
125s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gower arm64 1.0.2-1 [208 kB]
125s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sparsevctrs arm64 0.2.0-2 [169 kB]
125s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hardhat all 1.4.1+dfsg-1 [594 kB]
125s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rpart arm64 4.1.24-1 [665 kB]
125s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shape all 1.4.6.1-1 [749 kB]
125s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diagram all 1.6.5-2 [656 kB]
125s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-kernsmooth arm64 2.23-26-1 [93.3 kB]
125s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
125s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-progressr all 0.15.1-1 [353 kB]
125s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-squarem all 2021.1-1 [179 kB]
125s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lava all 1.8.1+dfsg-1 [2191 kB]
126s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-prodlim arm64 2024.06.25-1 [415 kB]
126s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ipred arm64 0.9-15-1 [386 kB]
126s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-timechange arm64 0.3.0-2 [175 kB]
126s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lubridate arm64 1.9.4+dfsg-1 [1009 kB]
126s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-timedate arm64 4051.111-1 [1298 kB]
126s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
126s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-reshape2 arm64 1.4.4-2build1 [110 kB]
127s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-caret arm64 7.0-1+dfsg-1 [3461 kB]
129s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-conquer arm64 1.3.3-1 [440 kB]
129s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-quantreg arm64 6.1-1 [1437 kB]
129s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-foreign arm64 0.8.90-1 [243 kB]
129s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB]
129s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clipr all 0.8.0-1 [53.5 kB]
129s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB]
129s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB]
129s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB]
129s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vroom arm64 1.6.6-1 [843 kB]
130s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-readr arm64 2.1.5-1 [756 kB]
130s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-haven arm64 2.5.5-1 [355 kB]
130s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 6.2.1+dfsg-1ubuntu1 [196 kB]
130s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rematch all 2.0.0-1 [18.3 kB]
130s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cellranger all 1.1.0-3 [102 kB]
130s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-readxl arm64 1.4.5-1 [342 kB]
130s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-writexl arm64 1.5.4-1 [159 kB]
130s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
130s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r.oo all 1.27.0-1 [979 kB]
130s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r.utils all 2.13.0-1 [1423 kB]
130s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-zip arm64 2.3.3-1 [148 kB]
130s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openxlsx arm64 4.2.8.1-1 [2014 kB]
130s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rio all 1.2.4-1 [544 kB]
130s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-car all 3.1-3-1 [1525 kB]
131s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB]
131s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB]
131s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB]
131s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1 [1116 kB]
131s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mitools all 2.4-2build1 [265 kB]
131s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survey arm64 4.4-2-2 [3448 kB]
131s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-estimability all 1.5.1-1 [50.9 kB]
131s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-insight all 1.1.0+dfsg-1 [2175 kB]
131s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-effects all 4.2.4-1 [2350 kB]
131s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-emmeans all 1.10.7+dfsg-1 [1665 kB]
132s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
132s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tmb arm64 1.9.17-1 [1148 kB]
132s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glmmtmb arm64 1.1.10+dfsg-1build2 [5778 kB]
132s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB]
132s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB]
132s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB]
132s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mlmrev all 1.0-8-2build1 [1806 kB]
132s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-th.data all 1.1-4-1 [8724 kB]
132s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-zoo arm64 1.8-14-1 [997 kB]
133s Get:247 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sandwich all 3.1-1-1 [1483 kB]
133s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-multcomp all 1.4-29-1 [617 kB]
133s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.6-1 [213 kB]
133s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.0.4-2 [125 kB]
133s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.0-1 [247 kB]
133s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB]
133s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
133s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pscl arm64 1.5.9-1 [3381 kB]
133s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.56-1 [148 kB]
133s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB]
133s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB]
133s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB]
133s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
133s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
133s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
133s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.1-2 [150 kB]
133s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB]
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147s Selecting previously unselected package r-cran-lifecycle.
147s Preparing to unpack .../100-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
147s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
147s Selecting previously unselected package r-cran-magrittr.
147s Preparing to unpack .../101-r-cran-magrittr_2.0.3-1_arm64.deb ...
147s Unpacking r-cran-magrittr (2.0.3-1) ...
147s Selecting previously unselected package r-cran-utf8.
147s Preparing to unpack .../102-r-cran-utf8_1.2.4-1_arm64.deb ...
147s Unpacking r-cran-utf8 (1.2.4-1) ...
147s Selecting previously unselected package r-cran-vctrs.
147s Preparing to unpack .../103-r-cran-vctrs_0.6.5-1_arm64.deb ...
147s Unpacking r-cran-vctrs (0.6.5-1) ...
147s Selecting previously unselected package r-cran-pillar.
147s Preparing to unpack .../104-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
147s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
147s Selecting previously unselected package r-cran-r6.
147s Preparing to unpack .../105-r-cran-r6_2.6.1-1_all.deb ...
147s Unpacking r-cran-r6 (2.6.1-1) ...
147s Selecting previously unselected package r-cran-fansi.
147s Preparing to unpack .../106-r-cran-fansi_1.0.6-2_arm64.deb ...
147s Unpacking r-cran-fansi (1.0.6-2) ...
148s Selecting previously unselected package r-cran-pkgconfig.
148s Preparing to unpack .../107-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
148s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
148s Selecting previously unselected package r-cran-tibble.
148s Preparing to unpack .../108-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ...
148s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
148s Selecting previously unselected package r-cran-withr.
148s Preparing to unpack .../109-r-cran-withr_3.0.2+dfsg-1_all.deb ...
148s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
148s Selecting previously unselected package r-cran-tidyselect.
148s Preparing to unpack .../110-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ...
148s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
148s Selecting previously unselected package r-cran-dplyr.
148s Preparing to unpack .../111-r-cran-dplyr_1.1.4-4_arm64.deb ...
148s Unpacking r-cran-dplyr (1.1.4-4) ...
148s Selecting previously unselected package r-cran-purrr.
148s Preparing to unpack .../112-r-cran-purrr_1.0.4-1_arm64.deb ...
148s Unpacking r-cran-purrr (1.0.4-1) ...
148s Selecting previously unselected package r-cran-stringi.
148s Preparing to unpack .../113-r-cran-stringi_1.8.4-1build1_arm64.deb ...
148s Unpacking r-cran-stringi (1.8.4-1build1) ...
148s Selecting previously unselected package r-cran-stringr.
148s Preparing to unpack .../114-r-cran-stringr_1.5.1-1_all.deb ...
148s Unpacking r-cran-stringr (1.5.1-1) ...
148s Selecting previously unselected package r-cran-cpp11.
148s Preparing to unpack .../115-r-cran-cpp11_0.5.2-1_all.deb ...
148s Unpacking r-cran-cpp11 (0.5.2-1) ...
148s Selecting previously unselected package r-cran-tidyr.
148s Preparing to unpack .../116-r-cran-tidyr_1.3.1-1_arm64.deb ...
148s Unpacking r-cran-tidyr (1.3.1-1) ...
149s Selecting previously unselected package r-cran-broom.
149s Preparing to unpack .../117-r-cran-broom_1.0.7+dfsg-1_all.deb ...
149s Unpacking r-cran-broom (1.0.7+dfsg-1) ...
149s Selecting previously unselected package r-cran-coda.
149s Preparing to unpack .../118-r-cran-coda_0.19-4.1-1_all.deb ...
149s Unpacking r-cran-coda (0.19-4.1-1) ...
149s Selecting previously unselected package r-cran-ellipsis.
149s Preparing to unpack .../119-r-cran-ellipsis_0.3.2-2_arm64.deb ...
149s Unpacking r-cran-ellipsis (0.3.2-2) ...
149s Selecting previously unselected package r-cran-forcats.
149s Preparing to unpack .../120-r-cran-forcats_1.0.1-1_all.deb ...
149s Unpacking r-cran-forcats (1.0.1-1) ...
149s Selecting previously unselected package r-cran-digest.
149s Preparing to unpack .../121-r-cran-digest_0.6.37-1_arm64.deb ...
149s Unpacking r-cran-digest (0.6.37-1) ...
149s Selecting previously unselected package r-cran-codetools.
149s Preparing to unpack .../122-r-cran-codetools_0.2-20-1_all.deb ...
149s Unpacking r-cran-codetools (0.2-20-1) ...
149s Selecting previously unselected package r-cran-globals.
149s Preparing to unpack .../123-r-cran-globals_0.16.3-1_all.deb ...
149s Unpacking r-cran-globals (0.16.3-1) ...
149s Selecting previously unselected package r-cran-listenv.
149s Preparing to unpack .../124-r-cran-listenv_0.9.1+dfsg-1_all.deb ...
149s Unpacking r-cran-listenv (0.9.1+dfsg-1) ...
149s Selecting previously unselected package r-cran-parallelly.
149s Preparing to unpack .../125-r-cran-parallelly_1.42.0-1_arm64.deb ...
149s Unpacking r-cran-parallelly (1.42.0-1) ...
149s Selecting previously unselected package r-cran-future.
149s Preparing to unpack .../126-r-cran-future_1.34.0+dfsg-1_all.deb ...
149s Unpacking r-cran-future (1.34.0+dfsg-1) ...
149s Selecting previously unselected package r-cran-furrr.
149s Preparing to unpack .../127-r-cran-furrr_0.3.1-1_all.deb ...
149s Unpacking r-cran-furrr (0.3.1-1) ...
149s Selecting previously unselected package r-cran-broom.mixed.
149s Preparing to unpack .../128-r-cran-broom.mixed_0.2.9.6-3_all.deb ...
149s Unpacking r-cran-broom.mixed (0.2.9.6-3) ...
150s Selecting previously unselected package r-cran-fastmap.
150s Preparing to unpack .../129-r-cran-fastmap_1.2.0-1_arm64.deb ...
150s Unpacking r-cran-fastmap (1.2.0-1) ...
150s Selecting previously unselected package r-cran-cachem.
150s Preparing to unpack .../130-r-cran-cachem_1.1.0-1_arm64.deb ...
150s Unpacking r-cran-cachem (1.1.0-1) ...
150s Selecting previously unselected package r-cran-htmltools.
150s Preparing to unpack .../131-r-cran-htmltools_0.5.8.1-1_arm64.deb ...
150s Unpacking r-cran-htmltools (0.5.8.1-1) ...
150s Selecting previously unselected package r-cran-jquerylib.
150s Preparing to unpack .../132-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ...
150s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ...
150s Selecting previously unselected package r-cran-jsonlite.
150s Preparing to unpack .../133-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ...
150s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
150s Selecting previously unselected package r-cran-memoise.
150s Preparing to unpack .../134-r-cran-memoise_2.0.1-1_all.deb ...
150s Unpacking r-cran-memoise (2.0.1-1) ...
150s Selecting previously unselected package r-cran-mime.
150s Preparing to unpack .../135-r-cran-mime_0.12-2_arm64.deb ...
150s Unpacking r-cran-mime (0.12-2) ...
150s Selecting previously unselected package r-cran-fs.
150s Preparing to unpack .../136-r-cran-fs_1.6.5+dfsg-1_arm64.deb ...
150s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
150s Selecting previously unselected package r-cran-rappdirs.
150s Preparing to unpack .../137-r-cran-rappdirs_0.3.3-1_arm64.deb ...
150s Unpacking r-cran-rappdirs (0.3.3-1) ...
150s Selecting previously unselected package r-cran-sass.
150s Preparing to unpack .../138-r-cran-sass_0.4.9+dfsg-1_arm64.deb ...
150s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
150s Selecting previously unselected package r-cran-bslib.
150s Preparing to unpack .../139-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
150s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
151s Selecting previously unselected package r-cran-ps.
151s Preparing to unpack .../140-r-cran-ps_1.9.0-1_arm64.deb ...
151s Unpacking r-cran-ps (1.9.0-1) ...
151s Selecting previously unselected package r-cran-processx.
151s Preparing to unpack .../141-r-cran-processx_3.8.6-1_arm64.deb ...
151s Unpacking r-cran-processx (3.8.6-1) ...
151s Selecting previously unselected package r-cran-callr.
151s Preparing to unpack .../142-r-cran-callr_3.7.6-1_all.deb ...
151s Unpacking r-cran-callr (3.7.6-1) ...
151s Selecting previously unselected package r-cran-cardata.
151s Preparing to unpack .../143-r-cran-cardata_3.0.5-1_all.deb ...
151s Unpacking r-cran-cardata (3.0.5-1) ...
151s Selecting previously unselected package r-cran-formula.
151s Preparing to unpack .../144-r-cran-formula_1.2-5-1_all.deb ...
151s Unpacking r-cran-formula (1.2-5-1) ...
151s Selecting previously unselected package r-cran-mgcv.
151s Preparing to unpack .../145-r-cran-mgcv_1.9-3-1_arm64.deb ...
151s Unpacking r-cran-mgcv (1.9-3-1) ...
151s Selecting previously unselected package r-cran-nnet.
151s Preparing to unpack .../146-r-cran-nnet_7.3-20-1_arm64.deb ...
151s Unpacking r-cran-nnet (7.3-20-1) ...
151s Selecting previously unselected package r-cran-gtable.
151s Preparing to unpack .../147-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
151s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
151s Selecting previously unselected package r-cran-isoband.
152s Preparing to unpack .../148-r-cran-isoband_0.2.7-1_arm64.deb ...
152s Unpacking r-cran-isoband (0.2.7-1) ...
152s Selecting previously unselected package r-cran-farver.
152s Preparing to unpack .../149-r-cran-farver_2.1.2-1_arm64.deb ...
152s Unpacking r-cran-farver (2.1.2-1) ...
152s Selecting previously unselected package r-cran-labeling.
152s Preparing to unpack .../150-r-cran-labeling_0.4.3-1_all.deb ...
152s Unpacking r-cran-labeling (0.4.3-1) ...
152s Selecting previously unselected package r-cran-colorspace.
152s Preparing to unpack .../151-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ...
152s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
152s Selecting previously unselected package r-cran-munsell.
152s Preparing to unpack .../152-r-cran-munsell_0.5.1-1_all.deb ...
152s Unpacking r-cran-munsell (0.5.1-1) ...
152s Selecting previously unselected package r-cran-rcolorbrewer.
152s Preparing to unpack .../153-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ...
152s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
152s Selecting previously unselected package r-cran-viridislite.
152s Preparing to unpack .../154-r-cran-viridislite_0.4.2-2_all.deb ...
152s Unpacking r-cran-viridislite (0.4.2-2) ...
152s Selecting previously unselected package r-cran-scales.
152s Preparing to unpack .../155-r-cran-scales_1.3.0-1_all.deb ...
152s Unpacking r-cran-scales (1.3.0-1) ...
152s Selecting previously unselected package r-cran-ggplot2.
152s Preparing to unpack .../156-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
152s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
152s Selecting previously unselected package r-cran-cowplot.
152s Preparing to unpack .../157-r-cran-cowplot_1.1.3+dfsg-1_all.deb ...
152s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ...
153s Selecting previously unselected package r-cran-deriv.
153s Preparing to unpack .../158-r-cran-deriv_4.2.0-1_all.deb ...
153s Unpacking r-cran-deriv (4.2.0-1) ...
153s Selecting previously unselected package r-cran-modelr.
153s Preparing to unpack .../159-r-cran-modelr_0.1.11-1_all.deb ...
153s Unpacking r-cran-modelr (0.1.11-1) ...
153s Selecting previously unselected package r-cran-microbenchmark.
153s Preparing to unpack .../160-r-cran-microbenchmark_1.5.0-1_arm64.deb ...
153s Unpacking r-cran-microbenchmark (1.5.0-1) ...
153s Selecting previously unselected package r-cran-doby.
153s Preparing to unpack .../161-r-cran-doby_4.7.0-1_all.deb ...
153s Unpacking r-cran-doby (4.7.0-1) ...
153s Selecting previously unselected package r-cran-evaluate.
153s Preparing to unpack .../162-r-cran-evaluate_1.0.3-1_all.deb ...
153s Unpacking r-cran-evaluate (1.0.3-1) ...
153s Selecting previously unselected package r-cran-xfun.
153s Preparing to unpack .../163-r-cran-xfun_0.51+dfsg-1_arm64.deb ...
153s Unpacking r-cran-xfun (0.51+dfsg-1) ...
153s Selecting previously unselected package r-cran-highr.
153s Preparing to unpack .../164-r-cran-highr_0.11+dfsg-1_all.deb ...
153s Unpacking r-cran-highr (0.11+dfsg-1) ...
153s Selecting previously unselected package r-cran-yaml.
153s Preparing to unpack .../165-r-cran-yaml_2.3.10-1_arm64.deb ...
153s Unpacking r-cran-yaml (2.3.10-1) ...
153s Selecting previously unselected package libjs-mathjax.
153s Preparing to unpack .../166-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
153s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
155s Selecting previously unselected package r-cran-knitr.
155s Preparing to unpack .../167-r-cran-knitr_1.50+dfsg-1_all.deb ...
155s Unpacking r-cran-knitr (1.50+dfsg-1) ...
155s Selecting previously unselected package r-cran-pbkrtest.
155s Preparing to unpack .../168-r-cran-pbkrtest_0.5.5-1_all.deb ...
155s Unpacking r-cran-pbkrtest (0.5.5-1) ...
155s Selecting previously unselected package r-cran-sparsem.
155s Preparing to unpack .../169-r-cran-sparsem_1.84-2-1_arm64.deb ...
155s Unpacking r-cran-sparsem (1.84-2-1) ...
155s Selecting previously unselected package r-cran-matrixmodels.
155s Preparing to unpack .../170-r-cran-matrixmodels_0.5-4-1_all.deb ...
155s Unpacking r-cran-matrixmodels (0.5-4-1) ...
155s Selecting previously unselected package r-cran-survival.
155s Preparing to unpack .../171-r-cran-survival_3.8-3-1_arm64.deb ...
155s Unpacking r-cran-survival (3.8-3-1) ...
155s Selecting previously unselected package r-cran-matrixstats.
155s Preparing to unpack .../172-r-cran-matrixstats_1.5.0-1_arm64.deb ...
155s Unpacking r-cran-matrixstats (1.5.0-1) ...
155s Selecting previously unselected package r-cran-rcpparmadillo.
155s Preparing to unpack .../173-r-cran-rcpparmadillo_15.0.2-2-1_arm64.deb ...
155s Unpacking r-cran-rcpparmadillo (15.0.2-2-1) ...
156s Selecting previously unselected package r-cran-class.
156s Preparing to unpack .../174-r-cran-class_7.3-23-1_arm64.deb ...
156s Unpacking r-cran-class (7.3-23-1) ...
156s Selecting previously unselected package r-cran-proxy.
156s Preparing to unpack .../175-r-cran-proxy_0.4-27-1_arm64.deb ...
156s Unpacking r-cran-proxy (0.4-27-1) ...
156s Selecting previously unselected package r-cran-e1071.
156s Preparing to unpack .../176-r-cran-e1071_1.7-16-1_arm64.deb ...
156s Unpacking r-cran-e1071 (1.7-16-1) ...
156s Selecting previously unselected package r-cran-iterators.
156s Preparing to unpack .../177-r-cran-iterators_1.0.14-1_all.deb ...
156s Unpacking r-cran-iterators (1.0.14-1) ...
156s Selecting previously unselected package r-cran-foreach.
156s Preparing to unpack .../178-r-cran-foreach_1.5.2-1_all.deb ...
156s Unpacking r-cran-foreach (1.5.2-1) ...
156s Selecting previously unselected package r-cran-data.table.
156s Preparing to unpack .../179-r-cran-data.table_1.17.0+dfsg-1_arm64.deb ...
156s Unpacking r-cran-data.table (1.17.0+dfsg-1) ...
156s Selecting previously unselected package r-cran-modelmetrics.
156s Preparing to unpack .../180-r-cran-modelmetrics_1.2.2.2-1build1_arm64.deb ...
156s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ...
156s Selecting previously unselected package r-cran-plyr.
156s Preparing to unpack .../181-r-cran-plyr_1.8.9-1_arm64.deb ...
156s Unpacking r-cran-plyr (1.8.9-1) ...
156s Selecting previously unselected package r-cran-proc.
157s Preparing to unpack .../182-r-cran-proc_1.18.5-1_arm64.deb ...
157s Unpacking r-cran-proc (1.18.5-1) ...
157s Selecting previously unselected package r-cran-tzdb.
157s Preparing to unpack .../183-r-cran-tzdb_0.5.0-1_arm64.deb ...
157s Unpacking r-cran-tzdb (0.5.0-1) ...
157s Selecting previously unselected package r-cran-clock.
157s Preparing to unpack .../184-r-cran-clock_0.7.2-1_arm64.deb ...
157s Unpacking r-cran-clock (0.7.2-1) ...
157s Selecting previously unselected package r-cran-gower.
157s Preparing to unpack .../185-r-cran-gower_1.0.2-1_arm64.deb ...
157s Unpacking r-cran-gower (1.0.2-1) ...
157s Selecting previously unselected package r-cran-sparsevctrs.
157s Preparing to unpack .../186-r-cran-sparsevctrs_0.2.0-2_arm64.deb ...
157s Unpacking r-cran-sparsevctrs (0.2.0-2) ...
157s Selecting previously unselected package r-cran-hardhat.
157s Preparing to unpack .../187-r-cran-hardhat_1.4.1+dfsg-1_all.deb ...
157s Unpacking r-cran-hardhat (1.4.1+dfsg-1) ...
157s Selecting previously unselected package r-cran-rpart.
157s Preparing to unpack .../188-r-cran-rpart_4.1.24-1_arm64.deb ...
157s Unpacking r-cran-rpart (4.1.24-1) ...
157s Selecting previously unselected package r-cran-shape.
157s Preparing to unpack .../189-r-cran-shape_1.4.6.1-1_all.deb ...
157s Unpacking r-cran-shape (1.4.6.1-1) ...
157s Selecting previously unselected package r-cran-diagram.
157s Preparing to unpack .../190-r-cran-diagram_1.6.5-2_all.deb ...
157s Unpacking r-cran-diagram (1.6.5-2) ...
157s Selecting previously unselected package r-cran-kernsmooth.
157s Preparing to unpack .../191-r-cran-kernsmooth_2.23-26-1_arm64.deb ...
157s Unpacking r-cran-kernsmooth (2.23-26-1) ...
157s Selecting previously unselected package r-cran-future.apply.
158s Preparing to unpack .../192-r-cran-future.apply_1.11.3+dfsg-1_all.deb ...
158s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ...
158s Selecting previously unselected package r-cran-progressr.
158s Preparing to unpack .../193-r-cran-progressr_0.15.1-1_all.deb ...
158s Unpacking r-cran-progressr (0.15.1-1) ...
158s Selecting previously unselected package r-cran-squarem.
158s Preparing to unpack .../194-r-cran-squarem_2021.1-1_all.deb ...
158s Unpacking r-cran-squarem (2021.1-1) ...
158s Selecting previously unselected package r-cran-lava.
158s Preparing to unpack .../195-r-cran-lava_1.8.1+dfsg-1_all.deb ...
158s Unpacking r-cran-lava (1.8.1+dfsg-1) ...
158s Selecting previously unselected package r-cran-prodlim.
158s Preparing to unpack .../196-r-cran-prodlim_2024.06.25-1_arm64.deb ...
158s Unpacking r-cran-prodlim (2024.06.25-1) ...
158s Selecting previously unselected package r-cran-ipred.
158s Preparing to unpack .../197-r-cran-ipred_0.9-15-1_arm64.deb ...
158s Unpacking r-cran-ipred (0.9-15-1) ...
158s Selecting previously unselected package r-cran-timechange.
158s Preparing to unpack .../198-r-cran-timechange_0.3.0-2_arm64.deb ...
158s Unpacking r-cran-timechange (0.3.0-2) ...
158s Selecting previously unselected package r-cran-lubridate.
158s Preparing to unpack .../199-r-cran-lubridate_1.9.4+dfsg-1_arm64.deb ...
158s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ...
158s Selecting previously unselected package r-cran-timedate.
158s Preparing to unpack .../200-r-cran-timedate_4051.111-1_arm64.deb ...
158s Unpacking r-cran-timedate (4051.111-1) ...
158s Selecting previously unselected package r-cran-recipes.
158s Preparing to unpack .../201-r-cran-recipes_1.1.0+dfsg-1_all.deb ...
158s Unpacking r-cran-recipes (1.1.0+dfsg-1) ...
158s Selecting previously unselected package r-cran-reshape2.
159s Preparing to unpack .../202-r-cran-reshape2_1.4.4-2build1_arm64.deb ...
159s Unpacking r-cran-reshape2 (1.4.4-2build1) ...
159s Selecting previously unselected package r-cran-caret.
159s Preparing to unpack .../203-r-cran-caret_7.0-1+dfsg-1_arm64.deb ...
159s Unpacking r-cran-caret (7.0-1+dfsg-1) ...
159s Selecting previously unselected package r-cran-conquer.
159s Preparing to unpack .../204-r-cran-conquer_1.3.3-1_arm64.deb ...
159s Unpacking r-cran-conquer (1.3.3-1) ...
159s Selecting previously unselected package r-cran-quantreg.
159s Preparing to unpack .../205-r-cran-quantreg_6.1-1_arm64.deb ...
159s Unpacking r-cran-quantreg (6.1-1) ...
159s Selecting previously unselected package r-cran-foreign.
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159s Selecting previously unselected package r-cran-hms.
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159s Unpacking r-cran-hms (1.1.3-1) ...
159s Selecting previously unselected package r-cran-clipr.
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159s Unpacking r-cran-clipr (0.8.0-1) ...
159s Selecting previously unselected package r-cran-crayon.
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159s Unpacking r-cran-crayon (1.5.3-1) ...
159s Selecting previously unselected package r-cran-prettyunits.
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159s Unpacking r-cran-prettyunits (1.2.0-1) ...
159s Selecting previously unselected package r-cran-progress.
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159s Selecting previously unselected package r-cran-vroom.
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160s Selecting previously unselected package r-cran-readr.
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160s Selecting previously unselected package r-cran-haven.
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160s Unpacking r-cran-haven (2.5.5-1) ...
160s Selecting previously unselected package r-cran-curl.
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160s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
160s Selecting previously unselected package r-cran-rematch.
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160s Unpacking r-cran-rematch (2.0.0-1) ...
160s Selecting previously unselected package r-cran-cellranger.
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160s Unpacking r-cran-cellranger (1.1.0-3) ...
160s Selecting previously unselected package r-cran-readxl.
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160s Selecting previously unselected package r-cran-writexl.
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160s Unpacking r-cran-writexl (1.5.4-1) ...
160s Selecting previously unselected package r-cran-r.methodss3.
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160s Unpacking r-cran-r.methodss3 (1.8.2-1) ...
160s Selecting previously unselected package r-cran-r.oo.
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161s Selecting previously unselected package r-cran-r.utils.
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161s Selecting previously unselected package r-cran-zip.
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161s Unpacking r-cran-zip (2.3.3-1) ...
161s Selecting previously unselected package r-cran-openxlsx.
161s Preparing to unpack .../224-r-cran-openxlsx_4.2.8.1-1_arm64.deb ...
161s Unpacking r-cran-openxlsx (4.2.8.1-1) ...
161s Selecting previously unselected package r-cran-rio.
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161s Selecting previously unselected package r-cran-car.
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161s Selecting previously unselected package r-cran-commonmark.
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161s Selecting previously unselected package r-cran-dbi.
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162s Selecting previously unselected package r-cran-desc.
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162s Unpacking r-cran-desc (1.4.3-1) ...
162s Selecting previously unselected package r-cran-diffobj.
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162s Selecting previously unselected package r-cran-mitools.
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162s Unpacking r-cran-mitools (2.4-2build1) ...
162s Selecting previously unselected package r-cran-survey.
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162s Selecting previously unselected package r-cran-estimability.
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162s Selecting previously unselected package r-cran-insight.
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162s Selecting previously unselected package r-cran-effects.
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163s Selecting previously unselected package r-cran-emmeans.
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163s Selecting previously unselected package r-cran-fontawesome.
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163s Selecting previously unselected package r-cran-tmb.
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163s Selecting previously unselected package r-cran-glmmtmb.
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163s Selecting previously unselected package r-cran-later.
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163s Unpacking r-cran-later (1.4.1+dfsg-1) ...
163s Selecting previously unselected package r-cran-promises.
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163s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
164s Selecting previously unselected package r-cran-httpuv.
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164s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
164s Selecting previously unselected package r-cran-mlmrev.
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164s Unpacking r-cran-mlmrev (1.0-8-2build1) ...
164s Selecting previously unselected package r-cran-th.data.
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164s Unpacking r-cran-th.data (1.1-4-1) ...
164s Selecting previously unselected package r-cran-zoo.
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164s Selecting previously unselected package r-cran-sandwich.
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164s Selecting previously unselected package r-cran-multcomp.
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165s Selecting previously unselected package r-cran-pkgbuild.
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167s Setting up libjs-json (0~20221030+~1.0.8-1) ...
167s Setting up javascript-common (12+nmu1) ...
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172s Setting up r-base-core (4.5.2-1) ...
172s Creating config file /etc/R/Renviron with new version
172s Setting up r-cran-crayon (1.5.3-1) ...
172s Setting up r-cran-squarem (2021.1-1) ...
172s Setting up r-cran-labeling (0.4.3-1) ...
172s Setting up r-cran-sourcetools (0.1.7-1-1) ...
172s Setting up r-cran-lattice (0.22-7-1) ...
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172s Setting up r-cran-nlme (3.1.168-1) ...
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172s Setting up r-cran-sparsem (1.84-2-1) ...
172s Setting up r-cran-statmod (1.5.0-1) ...
172s Setting up r-cran-nnet (7.3-20-1) ...
172s Setting up r-cran-insight (1.1.0+dfsg-1) ...
172s Setting up r-cran-clipr (0.8.0-1) ...
172s Setting up r-cran-commonmark (1.9.5-1) ...
172s Setting up r-cran-proxy (0.4-27-1) ...
172s Setting up r-cran-r6 (2.6.1-1) ...
172s Setting up r-cran-pkgkitten (0.2.4-1) ...
172s Setting up r-cran-numderiv (2016.8-1.1-3) ...
172s Setting up r-cran-coda (0.19-4.1-1) ...
172s Setting up r-cran-magrittr (2.0.3-1) ...
172s Setting up r-cran-rappdirs (0.3.3-1) ...
172s Setting up r-cran-microbenchmark (1.5.0-1) ...
172s Setting up r-cran-littler (0.3.21-2) ...
172s Setting up r-cran-fs (1.6.5+dfsg-1) ...
172s Setting up r-cran-rcpp (1.1.0-1) ...
172s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
172s Setting up r-cran-codetools (0.2-20-1) ...
172s Setting up r-cran-brio (1.1.5-1) ...
172s Setting up r-cran-estimability (1.5.1-1) ...
172s Setting up r-cran-nloptr (2.2.1-2) ...
172s Setting up r-cran-boot (1.3-32-1) ...
172s Setting up r-cran-diffobj (0.3.5-1) ...
172s Setting up r-cran-rematch (2.0.0-1) ...
172s Setting up r-cran-rlang (1.1.5-3) ...
172s Setting up r-cran-matrixstats (1.5.0-1) ...
172s Setting up r-cran-listenv (0.9.1+dfsg-1) ...
172s Setting up r-cran-xfun (0.51+dfsg-1) ...
172s Setting up r-cran-withr (3.0.2+dfsg-1) ...
172s Setting up r-cran-backports (1.5.0-2) ...
172s Setting up r-cran-deriv (4.2.0-1) ...
172s Setting up r-cran-processx (3.8.6-1) ...
172s Setting up r-cran-mime (0.12-2) ...
172s Setting up r-cran-praise (1.0.0-4build1) ...
172s Setting up r-cran-generics (0.1.3-1) ...
172s Setting up r-cran-base64enc (0.1-3-3) ...
172s Setting up r-cran-iterators (1.0.14-1) ...
172s Setting up r-cran-abind (1.4-8-1) ...
172s Setting up r-cran-digest (0.6.37-1) ...
172s Setting up r-cran-yaml (2.3.10-1) ...
172s Setting up r-cran-gower (1.0.2-1) ...
172s Setting up r-cran-evaluate (1.0.3-1) ...
172s Setting up r-cran-dbi (1.2.3-1) ...
172s Setting up r-cran-timedate (4051.111-1) ...
172s Setting up r-cran-highr (0.11+dfsg-1) ...
172s Setting up r-cran-foreach (1.5.2-1) ...
172s Setting up r-cran-prettyunits (1.2.0-1) ...
172s Setting up r-cran-fansi (1.0.6-2) ...
172s Setting up r-cran-cardata (3.0.5-1) ...
172s Setting up r-cran-mass (7.3-65-1) ...
172s Setting up r-cran-bdsmatrix (1.3-7-1) ...
172s Setting up r-cran-data.table (1.17.0+dfsg-1) ...
172s Setting up r-cran-glue (1.8.0-1) ...
172s Setting up r-cran-foreign (0.8.90-1) ...
172s Setting up r-cran-writexl (1.5.4-1) ...
172s Setting up r-cran-bit (4.6.0+dfsg-1) ...
172s Setting up r-cran-xtable (1:1.8-4-2) ...
172s Setting up r-cran-cli (3.6.4-1) ...
172s Setting up r-cran-rbibutils (2.3-1) ...
172s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
172s Setting up r-cran-rprojroot (2.0.4-2) ...
172s Setting up r-cran-bit64 (4.6.0-1-4) ...
172s Setting up r-cran-progressr (0.15.1-1) ...
172s Setting up r-cran-shape (1.4.6.1-1) ...
172s Setting up r-cran-fastmap (1.2.0-1) ...
172s Setting up r-cran-png (0.1-8-1build2) ...
172s Setting up r-cran-r.methodss3 (1.8.2-1) ...
172s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
172s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
172s Setting up r-cran-utf8 (1.2.4-1) ...
172s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
172s Setting up r-cran-parallelly (1.42.0-1) ...
172s Setting up r-cran-stringi (1.8.4-1build1) ...
172s Setting up r-cran-cpp11 (0.5.2-1) ...
172s Setting up r-cran-mvtnorm (1.3-3-1) ...
172s Setting up r-cran-plyr (1.8.9-1) ...
172s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
172s Setting up r-cran-isoband (0.2.7-1) ...
172s Setting up r-cran-diagram (1.6.5-2) ...
172s Setting up r-cran-waldo (0.6.1-2) ...
172s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
172s Setting up r-cran-pscl (1.5.9-1) ...
172s Setting up r-cran-zoo (1.8-14-1) ...
172s Setting up r-cran-later (1.4.1+dfsg-1) ...
172s Setting up r-cran-matrix (1.7-4-1) ...
172s Setting up r-cran-htmltools (0.5.8.1-1) ...
172s Setting up r-cran-tinytex (0.56-1) ...
172s Setting up r-cran-kernsmooth (2.23-26-1) ...
172s Setting up r-cran-knitr (1.50+dfsg-1) ...
172s Setting up r-cran-mgcv (1.9-3-1) ...
172s Setting up r-cran-cachem (1.1.0-1) ...
172s Setting up r-cran-sass (0.4.9+dfsg-1) ...
172s Setting up r-cran-bbmle (1.0.25.1-1) ...
172s Setting up r-cran-rcpparmadillo (15.0.2-2-1) ...
172s Setting up r-cran-tzdb (0.5.0-1) ...
172s Setting up r-cran-globals (0.16.3-1) ...
172s Setting up r-cran-vctrs (0.6.5-1) ...
172s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
172s Setting up r-cran-mitools (2.4-2build1) ...
172s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
172s Setting up r-cran-ellipsis (0.3.2-2) ...
172s Setting up r-cran-minqa (1.2.8-1) ...
172s Setting up r-cran-stringr (1.5.1-1) ...
172s Setting up r-cran-class (7.3-23-1) ...
172s Setting up r-cran-modelmetrics (1.2.2.2-1build1) ...
172s Setting up r-cran-callr (3.7.6-1) ...
172s Setting up r-cran-openxlsx (4.2.8.1-1) ...
172s Setting up r-cran-matrixmodels (0.5-4-1) ...
172s Setting up r-cran-desc (1.4.3-1) ...
172s Setting up r-cran-sparsevctrs (0.2.0-2) ...
172s Setting up r-cran-munsell (0.5.1-1) ...
172s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
172s Setting up r-cran-clock (0.7.2-1) ...
172s Setting up r-cran-sandwich (3.1-1-1) ...
172s Setting up r-cran-proc (1.18.5-1) ...
172s Setting up r-cran-fontawesome (0.5.3-1) ...
172s Setting up r-cran-survival (3.8-3-1) ...
172s Setting up r-cran-survey (4.4-2-2) ...
172s Setting up r-cran-r.oo (1.27.0-1) ...
172s Setting up r-cran-rdpack (2.6.3-1) ...
172s Setting up r-cran-future (1.34.0+dfsg-1) ...
172s Setting up r-cran-forcats (1.0.1-1) ...
172s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
172s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
172s Setting up r-cran-reshape2 (1.4.4-2build1) ...
172s Setting up r-cran-emmeans (1.10.7+dfsg-1) ...
172s Setting up r-cran-future.apply (1.11.3+dfsg-1) ...
172s Setting up r-cran-tmb (1.9.17-1) ...
172s Setting up r-cran-timechange (0.3.0-2) ...
172s Setting up r-cran-th.data (1.1-4-1) ...
172s Setting up r-cran-hms (1.1.3-1) ...
172s Setting up r-cran-scales (1.3.0-1) ...
172s Setting up r-cran-memoise (2.0.1-1) ...
172s Setting up r-cran-lava (1.8.1+dfsg-1) ...
172s Setting up r-cran-promises (1.3.2+dfsg-1) ...
172s Setting up r-cran-purrr (1.0.4-1) ...
172s Setting up r-cran-e1071 (1.7-16-1) ...
172s Setting up r-cran-multcomp (1.4-29-1) ...
172s Setting up r-cran-pkgbuild (1.4.6-1) ...
172s Setting up r-cran-hardhat (1.4.1+dfsg-1) ...
172s Setting up r-cran-dplyr (1.1.4-4) ...
172s Setting up r-cran-reformulas (0.4.2-1) ...
172s Setting up r-cran-progress (1.2.3-1) ...
172s Setting up r-cran-lubridate (1.9.4+dfsg-1) ...
172s Setting up r-cran-pkgload (1.4.0-1) ...
172s Setting up r-cran-r.utils (2.13.0-1) ...
172s Setting up r-cran-vroom (1.6.6-1) ...
172s Setting up r-cran-prodlim (2024.06.25-1) ...
172s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
172s Setting up r-cran-cellranger (1.1.0-3) ...
172s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
172s Setting up r-cran-rpart (4.1.24-1) ...
172s Setting up r-cran-ipred (0.9-15-1) ...
172s Setting up r-cran-lme4 (1.1-37-1) ...
172s Setting up r-cran-furrr (0.3.1-1) ...
172s Setting up r-cran-mlmrev (1.0-8-2build1) ...
172s Setting up r-cran-testthat (3.2.3-1) ...
172s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
172s Setting up r-cran-readr (2.1.5-1) ...
172s Setting up r-cran-tidyr (1.3.1-1) ...
172s Setting up r-cran-recipes (1.1.0+dfsg-1) ...
172s Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
172s Setting up r-cran-readxl (1.4.5-1) ...
172s Setting up r-cran-blme (1.0-6-1) ...
172s Setting up r-cran-haven (2.5.5-1) ...
172s Setting up r-cran-effects (4.2.4-1) ...
172s Setting up r-cran-caret (7.0-1+dfsg-1) ...
172s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
172s Setting up r-cran-glmmtmb (1.1.10+dfsg-1build2) ...
172s Setting up r-cran-broom (1.0.7+dfsg-1) ...
172s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
172s Setting up r-cran-conquer (1.3.3-1) ...
172s Setting up r-cran-rio (1.2.4-1) ...
172s Setting up r-cran-broom.mixed (0.2.9.6-3) ...
172s Setting up r-cran-quantreg (6.1-1) ...
172s Setting up r-cran-modelr (0.1.11-1) ...
172s Setting up r-cran-doby (4.7.0-1) ...
172s Setting up r-cran-pbkrtest (0.5.5-1) ...
172s Setting up r-cran-car (3.1-3-1) ...
172s Processing triggers for libc-bin (2.42-2ubuntu2) ...
172s Processing triggers for man-db (2.13.1-1) ...
174s Processing triggers for install-info (7.2-5) ...
177s autopkgtest [16:39:07]: test run-unit-test: [-----------------------
177s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
177s BEGIN TEST AAAtest-all.R
177s 
177s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
177s Copyright (C) 2025 The R Foundation for Statistical Computing
177s Platform: aarch64-unknown-linux-gnu
177s 
177s R is free software and comes with ABSOLUTELY NO WARRANTY.
177s You are welcome to redistribute it under certain conditions.
177s Type 'license()' or 'licence()' for distribution details.
177s 
177s R is a collaborative project with many contributors.
177s Type 'contributors()' for more information and
177s 'citation()' on how to cite R or R packages in publications.
177s 
177s Type 'demo()' for some demos, 'help()' for on-line help, or
177s 'help.start()' for an HTML browser interface to help.
177s Type 'q()' to quit R.
177s 
178s > if (require("testthat")) {
178s +     pkg <- "glmmTMB"
178s +     require(pkg, character.only=TRUE)
178s +     print(sessionInfo())
178s +     test_check(pkg, reporter="summary")
178s +     print(warnings()) # TODO? catch most of these by expect_warning(..)
178s + } else {
178s +     warnings("Package 'testthat' not available, cannot run unit tests for package",
178s + 	     sQuote(pkg))
178s + }
178s Loading required package: testthat
178s Loading required package: glmmTMB
181s R version 4.5.2 (2025-10-31)
181s Platform: aarch64-unknown-linux-gnu
181s Running under: Ubuntu Resolute Raccoon (development branch)
181s 
181s Matrix products: default
181s BLAS:   /usr/lib/aarch64-linux-gnu/blas/libblas.so.3.12.1 
181s LAPACK: /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3.12.1;  LAPACK version 3.12.0
181s 
181s locale:
181s [1] C
181s 
181s time zone: Etc/UTC
181s tzcode source: system (glibc)
181s 
181s attached base packages:
181s [1] stats     graphics  grDevices utils     datasets  methods   base     
181s 
181s other attached packages:
181s [1] glmmTMB_1.1.10 testthat_3.2.3
181s 
181s loaded via a namespace (and not attached):
181s  [1] nlme_3.1-168        cli_3.6.4           TH.data_1.1-4      
181s  [4] rlang_1.1.5         estimability_1.5.1  reformulas_0.4.2   
181s  [7] xtable_1.8-4        minqa_1.2.8         zoo_1.8-14         
181s [10] TMB_1.9.17          lme4_1.1-37         brio_1.1.5         
181s [13] grid_4.5.2          MASS_7.3-65         mvtnorm_1.3-3      
181s [16] numDeriv_2016.8-1.1 multcomp_1.4-29     compiler_4.5.2     
181s [19] codetools_0.2-20    sandwich_3.1-1      emmeans_1.10.7     
181s [22] coda_0.19-4.1       Rcpp_1.1.0          mgcv_1.9-3         
181s [25] lattice_0.22-7      nloptr_2.2.1        R6_2.6.1           
181s [28] Rdpack_2.6.3        splines_4.5.2       rbibutils_2.3      
181s [31] magrittr_2.0.3      Matrix_1.7-4        tools_4.5.2        
181s [34] boot_1.3-32         survival_3.8-3     
183s Anova: ...............
192s VarCorr: ...............
192s altopt: 
192s alternative optimizers: S
196s basics: .............SS.....S......S
199s trickier examples: SS.SSSS........
200s bootMer: 
200s bootMer: SS
212s checkRank: ................................................
213s control: SS.
213s diagnose: .S
216s disp: ...
220s downstream: S.....
220s edgecases: 
221s test edge cases: .
221s env: 
223s basic examples: ...
236s families: .....................SSSSSSSSS..................................
236s formulas: 
236s formula parsing: ................
236s mapequal: ........
236s mapopt: 
258s methods: ...............................S..........................................S..............S.......................
259s misc: .
259s offset: SSSSSSSSS
259s predict: .....SSS
271s Predict two-column response case: SS.................S..SSS....S..S...S.............S.......
275s priors: ...........S
275s propto: W
277s reml: ........
282s rr: .........
282s saveload: 
283s Saving and loading glmmTMB objects: .
283s simulate: .........
285s simulate_new: ....S.........
285s smooths: 1234
285s sparseX: 
286s sparse X models: .......
286s start: ..
287s utils: .........................................................................................................
287s varstruc: 
289s variance structures: ........SSS.
290s weight: .........
290s zi: 
290s ZI models: SS
290s 
290s == Skipped =====================================================================
292s 1. downstream methods work with optim() ('test-altopt.R:11:3') - Reason: On CRAN
292s 
292s 2. Update Gaussian ('test-basics.R:85:3') - Reason: On CRAN
292s 
292s 3. Variance structures ('test-basics.R:94:3') - Reason: On CRAN
292s 
292s 4. Multiple RE, reordering ('test-basics.R:124:6') - Reason: On CRAN
292s 
292s 5. close to lme4 results ('test-basics.R:164:5') - Reason: On CRAN
292s 
292s 6. basic zero inflation ('test-basics.R:217:8') - Reason: On CRAN
292s 
292s 7. alternative binomial model specifications ('test-basics.R:236:5') - Reason: On CRAN
292s 
292s 8. NA handling ('test-basics.R:257:5') - Reason: On CRAN
292s 
292s 9. quine NB fit ('test-basics.R:275:5') - Reason: On CRAN
292s 
292s 10. contrasts arg ('test-basics.R:286:5') - Reason: On CRAN
292s 
292s 11. zero disp setting ('test-basics.R:297:5') - Reason: On CRAN
292s 
292s 12. Bernoulli responses ('test-bootMer.R:12:3') - Reason: On CRAN
292s 
292s 13. binomial responses ('test-bootMer.R:22:5') - Reason: On CRAN
292s 
292s 14. profile method ('test-control.R:16:3') - Reason: On CRAN
292s 
292s 15. parallel regions ('test-control.R:50:3') - Reason: On CRAN
292s 
292s 16. diagnose works with Tweedie fits ('test-diagnose.R:16:5') - Reason: On CRAN
292s 
292s 17. emmeans ('test-downstream.R:22:5') - Reason: On CRAN
292s 
292s 18. beta ('test-families.R:103:3') - Reason: On CRAN
292s 
292s 19. nbinom ('test-families.R:125:5') - Reason: On CRAN
292s 
292s 20. dbetabinom ('test-families.R:186:5') - Reason: On CRAN
292s 
292s 21. truncated ('test-families.R:259:5') - Reason: On CRAN
292s 
292s 22. truncated_genpois ('test-families.R:336:3') - Reason: On CRAN
292s 
292s 23. truncated_compois ('test-families.R:352:5') - Reason: On CRAN
292s 
292s 24. compois ('test-families.R:362:5') - Reason: On CRAN
292s 
292s 25. genpois ('test-families.R:372:5') - Reason: On CRAN
292s 
292s 26. tweedie ('test-families.R:380:5') - Reason: On CRAN
292s 
292s 27. anova ML/REML checks ('test-methods.R:135:5') - Reason: On CRAN
292s 
292s 28. simulate with re.form = NA ('test-methods.R:410:1') - Reason: empty test
292s 
292s 29. various binomial response types work ('test-methods.R:490:3') - Reason: On CRAN
292s 
292s 30. LM with offset as argument ('test-offset.R:27:3') - Reason: On CRAN
292s 
292s 31. LM with offset in formula ('test-offset.R:35:5') - Reason: On CRAN
292s 
292s 32. LM with offset in formula - variable not in environment ('test-offset.R:48:5') - Reason: On CRAN
292s 
292s 33. LM with offset in dispersion formula ('test-offset.R:57:5') - Reason: On CRAN
292s 
292s 34. LM with multiple offsets (cond/dispersion) ('test-offset.R:65:5') - Reason: On CRAN
292s 
292s 35. LM with random crap in the formula ('test-offset.R:74:5') - Reason: On CRAN
292s 
292s 36. offset in do.call ('test-offset.R:81:5') - Reason: On CRAN
292s 
292s 37. LONG offset in do.call ('test-offset.R:90:5') - Reason: On CRAN
292s 
292s 38. offset works with attributes ('test-offset.R:101:3') - Reason: On CRAN
292s 
292s 39. new levels of fixed effect factor ('test-predict.R:37:5') - Reason: On CRAN
292s 
292s 40. new levels in RE term ('test-predict.R:44:5') - Reason: On CRAN
292s 
292s 41. new levels in AR1 (OK) ('test-predict.R:51:5') - Reason: On CRAN
292s 
292s 42. two-column response ('test-predict.R:61:5') - Reason: On CRAN
292s 
292s 43. Prediction with dispformula=~0 ('test-predict.R:69:5') - Reason: On CRAN
292s 
292s 44. scale ('test-predict.R:183:5') - Reason: On CRAN
292s 
292s 45. scale_RE ('test-predict.R:205:5') - Reason: On CRAN
292s 
292s 46. complex bases in dispformula ('test-predict.R:212:5') - Reason: On CRAN
292s 
292s 47. fix_predvars works for I(x^2) ('test-predict.R:225:5') - Reason: On CRAN
292s 
292s 48. contrasts carried over ('test-predict.R:293:5') - Reason: On CRAN
292s 
292s 49. offset-only model (GH #625) ('test-predict.R:332:5') - Reason: On CRAN
292s 
292s 50. inverse-link prediction ('test-predict.R:351:3') - Reason: On CRAN
292s 
292s 51. nzprob doesn't segfault ('test-predict.R:442:5') - Reason: On CRAN
292s 
292s 52. prior specs ('test-priors.R:125:5') - Reason: On CRAN
292s 
292s 53. simulate_new, returning pars ('test-simulate_new.R:49:1') - Reason: empty test
292s 
292s 54. ar1 requires factor time ('test-varstruc.R:58:3') - Reason: On CRAN
292s 
292s 55. varcorr_print ('test-varstruc.R:78:5') - Reason: On CRAN
292s 
292s 56. cov_struct_order ('test-varstruc.R:109:5') - Reason: On CRAN
292s 
292s 57. zi ('test-zi.R:12:3') - Reason: On CRAN
292s 
292s 58. zi beta and Gamma ('test-zi.R:37:5') - Reason: On CRAN
292s 
292s == Warnings ====================================================================
292s 1. (code run outside of `test_that()`) ('test-propto.R:9:1') - there is no package called 'ade4'
292s 
292s == Failed ======================================================================
292s -- 1. Error ('test-smooths.R:11:5'): basic smooth ------------------------------
292s <notSubsettableError/error/condition>
292s Error in `x[[2]]`: object of type 'symbol' is not subsettable
292s Backtrace:
292s     x
292s  1. \-glmmTMB::glmmTMB(val ~ s(time), data = ndat, REML = TRUE, start = list(theta = log(sd(ndat$val)))) at test-smooths.R:11:5
292s  2.   \-glmmTMB:::mkTMBStruc(...)
292s  3.     \-glmmTMB:::getXReTrms(...)
292s  4.       \-base::Map(...)
292s  5.         \-base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
292s  6.           \-glmmTMB (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
292s  7.             \-glmmTMB (local) termsfun(f)
292s  8.               \-base::eval(substitute(~foo, list(foo = x[[2]])))
292s 
292s -- 2. Error ('test-smooths.R:26:5'): smooth with no fixed-effect components ----
292s <notSubsettableError/error/condition>
292s Error in `x[[2]]`: object of type 'symbol' is not subsettable
292s Backtrace:
292s     x
292s  1. \-glmmTMB::simulate_new(...) at test-smooths.R:26:5
292s  2.   \-glmmTMB::glmmTMB(...)
292s  3.     \-glmmTMB:::mkTMBStruc(...)
292s  4.       \-glmmTMB:::getXReTrms(...)
292s  5.         \-base::Map(...)
292s  6.           \-base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
292s  7.             \-glmmTMB (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
292s  8.               \-glmmTMB (local) termsfun(f)
292s  9.                 \-base::eval(substitute(~foo, list(foo = x[[2]])))
292s 
292s -- 3. Error ('test-smooths.R:48:5'): smooth + diag() specials ------------------
292s <notSubsettableError/error/condition>
292s Error in `x[[2]]`: object of type 'symbol' is not subsettable
292s Backtrace:
292s     x
292s  1. \-glmmTMB::simulate_new(...) at test-smooths.R:48:5
292s  2.   \-glmmTMB::glmmTMB(...)
292s  3.     \-glmmTMB:::mkTMBStruc(...)
292s  4.       \-glmmTMB:::getXReTrms(...)
292s  5.         \-base::Map(...)
292s  6.           \-base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
292s  7.             \-glmmTMB (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
292s  8.               \-glmmTMB (local) termsfun(f)
292s  9.                 \-base::eval(substitute(~foo, list(foo = x[[2]])))
292s 
292s -- 4. Error ('test-smooths.R:68:5'): multiple smooths --------------------------
292s <notSubsettableError/error/condition>
292s Error in `x[[2]]`: object of type 'symbol' is not subsettable
292s Backtrace:
292s     x
292s  1. \-glmmTMB::glmmTMB(y ~ s(x1) + s(x2), data = fake_data) at test-smooths.R:68:5
292s  2.   \-glmmTMB:::mkTMBStruc(...)
292s  3.     \-glmmTMB:::getXReTrms(...)
292s  4.       \-base::Map(...)
292s  5.         \-base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
292s  6.           \-glmmTMB (local) `<fn>`(dots[[1L]][[1L]], dots[[2L]][[1L]])
292s  7.             \-glmmTMB (local) termsfun(f)
292s  8.               \-base::eval(substitute(~foo, list(foo = x[[2]])))
292s 
292s == DONE ========================================================================
292s Error: Test failures
292s Execution halted
293s autopkgtest [16:41:03]: test run-unit-test: -----------------------]
293s run-unit-test        FAIL non-zero exit status 1
293s autopkgtest [16:41:03]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
294s autopkgtest [16:41:04]: test r-cran-tmb_compatibility: preparing testbed
314s Creating nova instance adt-resolute-arm64-r-cran-glmmtmb-20251117-163609-juju-7f2275-prod-proposed-migration-environment-20-67211aa4-08bc-4f96-92ec-35a3ae57e13a from image adt/ubuntu-resolute-arm64-server-20251117.img (UUID 1cd33fbb-18df-4c5a-b8f0-2dcb25269485)...
376s autopkgtest [16:42:26]: testbed dpkg architecture: arm64
376s autopkgtest [16:42:26]: testbed apt version: 3.1.11
376s autopkgtest [16:42:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup
376s autopkgtest [16:42:26]: testbed release detected to be: resolute
377s autopkgtest [16:42:27]: updating testbed package index (apt update)
378s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB]
378s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
378s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
378s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
378s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9852 B]
378s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB]
378s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [73.2 kB]
378s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [779 kB]
379s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [143 kB]
379s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [3224 B]
379s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [107 kB]
379s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [324 B]
379s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [517 kB]
379s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [17.1 kB]
379s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [12.5 kB]
379s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [576 B]
380s Fetched 1774 kB in 1s (1345 kB/s)
381s Reading package lists...
382s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
382s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
382s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
382s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
383s Reading package lists...
383s Reading package lists...
384s Building dependency tree...
384s Reading state information...
385s Calculating upgrade...
386s The following packages will be upgraded:
386s   apt libapt-pkg7.0 libcrypt-dev libcrypt1 usbutils
386s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
386s Need to get 2764 kB of archives.
386s After this operation, 104 kB of additional disk space will be used.
386s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libcrypt-dev arm64 1:4.5.1-1 [123 kB]
386s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libcrypt1 arm64 1:4.5.1-1 [88.3 kB]
386s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libapt-pkg7.0 arm64 3.1.12 [1063 kB]
387s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 apt arm64 3.1.12 [1407 kB]
387s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 usbutils arm64 1:019-1 [81.7 kB]
388s dpkg-preconfigure: unable to re-open stdin: No such file or directory
388s Fetched 2764 kB in 1s (2208 kB/s)
388s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 88137 files and directories currently installed.)
388s Preparing to unpack .../libcrypt-dev_1%3a4.5.1-1_arm64.deb ...
388s Unpacking libcrypt-dev:arm64 (1:4.5.1-1) over (1:4.4.38-1build1) ...
389s Preparing to unpack .../libcrypt1_1%3a4.5.1-1_arm64.deb ...
389s Unpacking libcrypt1:arm64 (1:4.5.1-1) over (1:4.4.38-1build1) ...
389s Setting up libcrypt1:arm64 (1:4.5.1-1) ...
389s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
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(Reading database ... 85%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 88137 files and directories currently installed.)
389s Preparing to unpack .../libapt-pkg7.0_3.1.12_arm64.deb ...
389s Unpacking libapt-pkg7.0:arm64 (3.1.12) over (3.1.11) ...
389s Preparing to unpack .../archives/apt_3.1.12_arm64.deb ...
389s Unpacking apt (3.1.12) over (3.1.11) ...
390s Preparing to unpack .../usbutils_1%3a019-1_arm64.deb ...
390s Unpacking usbutils (1:019-1) over (1:018-2) ...
390s Setting up usbutils (1:019-1) ...
390s Setting up libcrypt-dev:arm64 (1:4.5.1-1) ...
390s Setting up libapt-pkg7.0:arm64 (3.1.12) ...
390s Setting up apt (3.1.12) ...
391s Processing triggers for man-db (2.13.1-1) ...
394s Processing triggers for libc-bin (2.42-2ubuntu2) ...
394s autopkgtest [16:42:44]: upgrading testbed (apt dist-upgrade and autopurge)
395s Reading package lists...
396s Building dependency tree...
396s Reading state information...
396s Calculating upgrade...
397s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
397s Reading package lists...
398s Building dependency tree...
398s Reading state information...
398s Solving dependencies...
398s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
399s autopkgtest [16:42:49]: rebooting testbed after setup commands that affected boot
431s Reading package lists...
432s Building dependency tree...
432s Reading state information...
432s Solving dependencies...
432s The following NEW packages will be installed:
432s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
432s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
432s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
432s   liblapack3 liblerc4 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0
432s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6
432s   libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0
432s   libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-boot
432s   r-cran-glmmtmb r-cran-lattice r-cran-littler r-cran-lme4 r-cran-mass
432s   r-cran-matrix r-cran-mgcv r-cran-minqa r-cran-nlme r-cran-nloptr
432s   r-cran-numderiv r-cran-pkgkitten r-cran-rbibutils r-cran-rcpp
432s   r-cran-rcppeigen r-cran-rdpack r-cran-reformulas r-cran-statmod r-cran-tmb
432s   unzip x11-common xdg-utils zip
432s 0 upgraded, 65 newly installed, 0 to remove and 0 not upgraded.
432s Need to get 69.0 MB of archives.
432s After this operation, 142 MB of additional disk space will be used.
432s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
433s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
433s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.15.0-2.3ubuntu1 [38.1 kB]
433s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.15.0-2.3ubuntu1 [144 kB]
433s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.15.0-2.3ubuntu1 [191 kB]
433s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7 [181 kB]
433s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB]
433s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2build1 [18.1 kB]
433s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2build1 [6234 B]
433s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB]
433s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-1build1 [592 kB]
434s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.13-4 [19.1 kB]
434s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB]
434s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-7ubuntu1 [450 kB]
434s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-7ubuntu1 [147 kB]
434s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
434s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.1.0-1 [523 kB]
434s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
434s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
434s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB]
434s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
434s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7 [2300 kB]
434s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
434s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
434s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
434s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.56.3-2 [237 kB]
434s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.56.3-2 [50.2 kB]
434s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.56.3-2 [27.7 kB]
435s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
435s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
435s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
435s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB]
435s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [1024 kB]
435s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
435s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
435s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB]
435s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
435s Get:38 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
435s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB]
435s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB]
435s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu2 [175 kB]
435s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-28ubuntu7 [176 kB]
435s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
435s Get:44 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1 [28.6 MB]
437s Get:45 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-boot all 1.3-32-1 [636 kB]
437s Get:46 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB]
437s Get:47 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB]
437s Get:48 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.21-2 [83.6 kB]
437s Get:49 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
437s Get:50 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB]
437s Get:51 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB]
437s Get:52 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tmb arm64 1.9.17-1 [1148 kB]
437s Get:53 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB]
437s Get:54 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB]
437s Get:55 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-minqa arm64 1.2.8-1 [112 kB]
437s Get:56 http://ftpmaster.internal/ubuntu resolute/universe arm64 libnlopt0 arm64 2.7.1-7ubuntu1 [177 kB]
437s Get:57 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nloptr arm64 2.2.1-2 [250 kB]
437s Get:58 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rbibutils arm64 2.3-1 [1016 kB]
437s Get:59 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rdpack all 2.6.3-1 [636 kB]
437s Get:60 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-reformulas all 0.4.2-1 [132 kB]
437s Get:61 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB]
437s Get:62 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lme4 arm64 1.1-37-1 [4121 kB]
437s Get:63 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-numderiv all 2016.8-1.1-3 [115 kB]
437s Get:64 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mgcv arm64 1.9-3-1 [3324 kB]
437s Get:65 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glmmtmb arm64 1.1.10+dfsg-1build2 [5778 kB]
438s Preconfiguring packages ...
438s Fetched 69.0 MB in 5s (13.3 MB/s)
438s Selecting previously unselected package fonts-dejavu-mono.
438s (Reading database ... 
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(Reading database ... 70%
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(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 88137 files and directories currently installed.)
438s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
438s Unpacking fonts-dejavu-mono (2.37-8) ...
438s Selecting previously unselected package fonts-dejavu-core.
438s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
438s Unpacking fonts-dejavu-core (2.37-8) ...
438s Selecting previously unselected package fontconfig-config.
439s Preparing to unpack .../02-fontconfig-config_2.15.0-2.3ubuntu1_arm64.deb ...
439s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ...
439s Selecting previously unselected package libfontconfig1:arm64.
439s Preparing to unpack .../03-libfontconfig1_2.15.0-2.3ubuntu1_arm64.deb ...
439s Unpacking libfontconfig1:arm64 (2.15.0-2.3ubuntu1) ...
439s Selecting previously unselected package fontconfig.
439s Preparing to unpack .../04-fontconfig_2.15.0-2.3ubuntu1_arm64.deb ...
439s Unpacking fontconfig (2.15.0-2.3ubuntu1) ...
439s Selecting previously unselected package libblas3:arm64.
439s Preparing to unpack .../05-libblas3_3.12.1-7_arm64.deb ...
439s Unpacking libblas3:arm64 (3.12.1-7) ...
439s Selecting previously unselected package libpixman-1-0:arm64.
439s Preparing to unpack .../06-libpixman-1-0_0.46.4-1_arm64.deb ...
439s Unpacking libpixman-1-0:arm64 (0.46.4-1) ...
439s Selecting previously unselected package libxcb-render0:arm64.
439s Preparing to unpack .../07-libxcb-render0_1.17.0-2build1_arm64.deb ...
439s Unpacking libxcb-render0:arm64 (1.17.0-2build1) ...
439s Selecting previously unselected package libxcb-shm0:arm64.
439s Preparing to unpack .../08-libxcb-shm0_1.17.0-2build1_arm64.deb ...
439s Unpacking libxcb-shm0:arm64 (1.17.0-2build1) ...
439s Selecting previously unselected package libxrender1:arm64.
439s Preparing to unpack .../09-libxrender1_1%3a0.9.12-1_arm64.deb ...
439s Unpacking libxrender1:arm64 (1:0.9.12-1) ...
440s Selecting previously unselected package libcairo2:arm64.
440s Preparing to unpack .../10-libcairo2_1.18.4-1build1_arm64.deb ...
440s Unpacking libcairo2:arm64 (1.18.4-1build1) ...
440s Selecting previously unselected package libdatrie1:arm64.
440s Preparing to unpack .../11-libdatrie1_0.2.13-4_arm64.deb ...
440s Unpacking libdatrie1:arm64 (0.2.13-4) ...
440s Selecting previously unselected package libdeflate0:arm64.
440s Preparing to unpack .../12-libdeflate0_1.23-2_arm64.deb ...
440s Unpacking libdeflate0:arm64 (1.23-2) ...
440s Selecting previously unselected package libgfortran5:arm64.
440s Preparing to unpack .../13-libgfortran5_15.2.0-7ubuntu1_arm64.deb ...
440s Unpacking libgfortran5:arm64 (15.2.0-7ubuntu1) ...
440s Selecting previously unselected package libgomp1:arm64.
440s Preparing to unpack .../14-libgomp1_15.2.0-7ubuntu1_arm64.deb ...
440s Unpacking libgomp1:arm64 (15.2.0-7ubuntu1) ...
440s Selecting previously unselected package libgraphite2-3:arm64.
440s Preparing to unpack .../15-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ...
440s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
440s Selecting previously unselected package libharfbuzz0b:arm64.
440s Preparing to unpack .../16-libharfbuzz0b_12.1.0-1_arm64.deb ...
440s Unpacking libharfbuzz0b:arm64 (12.1.0-1) ...
440s Selecting previously unselected package x11-common.
440s Preparing to unpack .../17-x11-common_1%3a7.7+24ubuntu1_all.deb ...
440s Unpacking x11-common (1:7.7+24ubuntu1) ...
440s Selecting previously unselected package libice6:arm64.
440s Preparing to unpack .../18-libice6_2%3a1.1.1-1_arm64.deb ...
440s Unpacking libice6:arm64 (2:1.1.1-1) ...
440s Selecting previously unselected package libjpeg-turbo8:arm64.
440s Preparing to unpack .../19-libjpeg-turbo8_2.1.5-4ubuntu2_arm64.deb ...
440s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ...
440s Selecting previously unselected package libjpeg8:arm64.
440s Preparing to unpack .../20-libjpeg8_8c-2ubuntu11_arm64.deb ...
440s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
440s Selecting previously unselected package liblapack3:arm64.
440s Preparing to unpack .../21-liblapack3_3.12.1-7_arm64.deb ...
440s Unpacking liblapack3:arm64 (3.12.1-7) ...
440s Selecting previously unselected package liblerc4:arm64.
440s Preparing to unpack .../22-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ...
440s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
440s Selecting previously unselected package libthai-data.
441s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ...
441s Unpacking libthai-data (0.1.29-2build1) ...
441s Selecting previously unselected package libthai0:arm64.
441s Preparing to unpack .../24-libthai0_0.1.29-2build1_arm64.deb ...
441s Unpacking libthai0:arm64 (0.1.29-2build1) ...
441s Selecting previously unselected package libpango-1.0-0:arm64.
441s Preparing to unpack .../25-libpango-1.0-0_1.56.3-2_arm64.deb ...
441s Unpacking libpango-1.0-0:arm64 (1.56.3-2) ...
441s Selecting previously unselected package libpangoft2-1.0-0:arm64.
441s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.3-2_arm64.deb ...
441s Unpacking libpangoft2-1.0-0:arm64 (1.56.3-2) ...
441s Selecting previously unselected package libpangocairo-1.0-0:arm64.
441s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.3-2_arm64.deb ...
441s Unpacking libpangocairo-1.0-0:arm64 (1.56.3-2) ...
441s Selecting previously unselected package libpaper2:arm64.
441s Preparing to unpack .../28-libpaper2_2.2.5-0.3_arm64.deb ...
441s Unpacking libpaper2:arm64 (2.2.5-0.3) ...
441s Selecting previously unselected package libpaper-utils.
441s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_arm64.deb ...
441s Unpacking libpaper-utils (2.2.5-0.3) ...
441s Selecting previously unselected package libsharpyuv0:arm64.
441s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_arm64.deb ...
441s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ...
441s Selecting previously unselected package libsm6:arm64.
441s Preparing to unpack .../31-libsm6_2%3a1.2.6-1_arm64.deb ...
441s Unpacking libsm6:arm64 (2:1.2.6-1) ...
441s Selecting previously unselected package libtcl8.6:arm64.
441s Preparing to unpack .../32-libtcl8.6_8.6.17+dfsg-1_arm64.deb ...
441s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1) ...
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447s Regenerating fonts cache... done.
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447s Setting up libtk8.6:arm64 (8.6.17-1) ...
447s Setting up libpango-1.0-0:arm64 (1.56.3-2) ...
447s Setting up libcairo2:arm64 (1.18.4-1build1) ...
447s Setting up libxt6t64:arm64 (1:1.2.1-1.3) ...
447s Setting up libpangoft2-1.0-0:arm64 (1.56.3-2) ...
447s Setting up libpangocairo-1.0-0:arm64 (1.56.3-2) ...
447s Setting up r-base-core (4.5.2-1) ...
447s Creating config file /etc/R/Renviron with new version
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447s Setting up r-cran-nlme (3.1.168-1) ...
447s Setting up r-cran-statmod (1.5.0-1) ...
447s Setting up r-cran-pkgkitten (0.2.4-1) ...
447s Setting up r-cran-numderiv (2016.8-1.1-3) ...
447s Setting up r-cran-littler (0.3.21-2) ...
447s Setting up r-cran-rcpp (1.1.0-1) ...
447s Setting up r-cran-nloptr (2.2.1-2) ...
447s Setting up r-cran-boot (1.3-32-1) ...
447s Setting up r-cran-mass (7.3-65-1) ...
447s Setting up r-cran-rbibutils (2.3-1) ...
447s Setting up r-cran-matrix (1.7-4-1) ...
447s Setting up r-cran-mgcv (1.9-3-1) ...
447s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
447s Setting up r-cran-minqa (1.2.8-1) ...
447s Setting up r-cran-rdpack (2.6.3-1) ...
447s Setting up r-cran-tmb (1.9.17-1) ...
447s Setting up r-cran-reformulas (0.4.2-1) ...
447s Setting up r-cran-lme4 (1.1-37-1) ...
447s Setting up r-cran-glmmtmb (1.1.10+dfsg-1build2) ...
447s Processing triggers for install-info (7.2-5) ...
447s Processing triggers for libc-bin (2.42-2ubuntu2) ...
447s Processing triggers for man-db (2.13.1-1) ...
452s autopkgtest [16:43:42]: test r-cran-tmb_compatibility: R -e 'options("warn" = 2); library(glmmTMB)'
452s autopkgtest [16:43:42]: test r-cran-tmb_compatibility: [-----------------------
452s 
452s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
452s Copyright (C) 2025 The R Foundation for Statistical Computing
452s Platform: aarch64-unknown-linux-gnu
452s 
452s R is free software and comes with ABSOLUTELY NO WARRANTY.
452s You are welcome to redistribute it under certain conditions.
452s Type 'license()' or 'licence()' for distribution details.
452s 
452s R is a collaborative project with many contributors.
452s Type 'contributors()' for more information and
452s 'citation()' on how to cite R or R packages in publications.
452s 
452s Type 'demo()' for some demos, 'help()' for on-line help, or
452s 'help.start()' for an HTML browser interface to help.
452s Type 'q()' to quit R.
452s 
453s > options("warn" = 2); library(glmmTMB)
454s > 
454s autopkgtest [16:43:44]: test r-cran-tmb_compatibility: -----------------------]
455s autopkgtest [16:43:45]: test r-cran-tmb_compatibility:  - - - - - - - - - - results - - - - - - - - - -
455s r-cran-tmb_compatibility PASS (superficial)
455s autopkgtest [16:43:45]: @@@@@@@@@@@@@@@@@@@@ summary
455s run-unit-test        FAIL non-zero exit status 1
455s r-cran-tmb_compatibility PASS (superficial)