0s autopkgtest [23:22:42]: starting date and time: 2026-02-09 23:22:42+0000 0s autopkgtest [23:22:42]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [23:22:42]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.am6ustj_/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-saturn --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-arm64-13.secgroup --name adt-resolute-arm64-r-bioc-saturn-20260209-232242-juju-7f2275-prod-proposed-migration-environment-2-e3b9148d-cd36-48e3-8784-b56555c6d620 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-arm64-r-bioc-saturn-20260209-232242-juju-7f2275-prod-proposed-migration-environment-2-e3b9148d-cd36-48e3-8784-b56555c6d620 from image adt/ubuntu-resolute-arm64-server-20260209.img (UUID 793037ca-75af-461b-82de-f8081300b2e3)... 119s autopkgtest [23:24:41]: testbed dpkg architecture: arm64 120s autopkgtest [23:24:42]: testbed apt version: 3.1.15 120s autopkgtest [23:24:42]: @@@@@@@@@@@@@@@@@@@@ test bed setup 120s autopkgtest [23:24:42]: testbed release detected to be: None 121s autopkgtest [23:24:43]: updating testbed package index (apt update) 121s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 121s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 121s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 121s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 121s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 124s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 124s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 124s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [246 kB] 124s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [6216 B] 124s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [304 B] 124s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [1580 kB] 127s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [32.0 kB] 127s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [21.7 kB] 127s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [688 B] 129s Fetched 3862 kB in 6s (630 kB/s) 129s Reading package lists... 131s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 131s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 131s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 131s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 132s Reading package lists... 132s Reading package lists... 133s Building dependency tree... 133s Reading state information... 133s Calculating upgrade... 133s The following packages will be upgraded: 133s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 133s libip6tc2 libxtables12 wget 133s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 133s Need to get 2534 kB of archives. 133s After this operation, 18.4 kB of additional disk space will be used. 133s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 iptables arm64 1.8.11-2ubuntu3 [386 kB] 133s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libip4tc2 arm64 1.8.11-2ubuntu3 [24.3 kB] 133s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libip6tc2 arm64 1.8.11-2ubuntu3 [24.7 kB] 133s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libxtables12 arm64 1.8.11-2ubuntu3 [36.7 kB] 133s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 iproute2 arm64 6.18.0-1ubuntu1 [1171 kB] 135s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libcryptsetup12 arm64 2:2.8.0-1ubuntu3 [274 kB] 135s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 wget arm64 1.25.0-2ubuntu4 [344 kB] 135s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cryptsetup-bin arm64 2:2.8.0-1ubuntu3 [227 kB] 135s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 dracut-install arm64 109-11ubuntu1 [45.3 kB] 135s dpkg-preconfigure: unable to re-open stdin: No such file or directory 136s Fetched 2534 kB in 2s (1241 kB/s) 136s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136597 files and directories currently installed.) 136s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_arm64.deb ... 136s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 136s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_arm64.deb ... 136s Unpacking libip4tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 136s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_arm64.deb ... 136s Unpacking libip6tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 136s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_arm64.deb ... 136s Unpacking libxtables12:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 136s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_arm64.deb ... 136s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 136s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_arm64.deb ... 136s Unpacking libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 137s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_arm64.deb ... 137s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 137s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_arm64.deb ... 137s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 137s Preparing to unpack .../8-dracut-install_109-11ubuntu1_arm64.deb ... 137s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 137s Setting up libip4tc2:arm64 (1.8.11-2ubuntu3) ... 137s Setting up wget (1.25.0-2ubuntu4) ... 137s Setting up libip6tc2:arm64 (1.8.11-2ubuntu3) ... 137s Setting up libxtables12:arm64 (1.8.11-2ubuntu3) ... 137s Setting up dracut-install (109-11ubuntu1) ... 137s Setting up libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) ... 137s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 137s Setting up iptables (1.8.11-2ubuntu3) ... 137s Setting up iproute2 (6.18.0-1ubuntu1) ... 137s Processing triggers for man-db (2.13.1-1build1) ... 138s Processing triggers for install-info (7.2-5) ... 138s Processing triggers for libc-bin (2.42-2ubuntu4) ... 138s autopkgtest [23:25:00]: upgrading testbed (apt dist-upgrade and autopurge) 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 139s Calculating upgrade... 139s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s Solving dependencies... 140s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 143s autopkgtest [23:25:05]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 19:46:27 UTC 2026 143s autopkgtest [23:25:05]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-saturn 149s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-saturn 1.14.0+dfsg-2 (dsc) [2224 B] 149s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-saturn 1.14.0+dfsg-2 (tar) [2945 kB] 149s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-saturn 1.14.0+dfsg-2 (diff) [5676 B] 149s gpgv: Signature made Mon Jan 13 08:15:45 2025 UTC 149s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 149s gpgv: issuer "crusoe@debian.org" 149s gpgv: Can't check signature: No public key 149s dpkg-source: warning: cannot verify inline signature for ./r-bioc-saturn_1.14.0+dfsg-2.dsc: no acceptable signature found 149s autopkgtest [23:25:11]: testing package r-bioc-saturn version 1.14.0+dfsg-2 150s autopkgtest [23:25:12]: build not needed 151s autopkgtest [23:25:13]: test pkg-r-autopkgtest: preparing testbed 151s Reading package lists... 152s Building dependency tree... 152s Reading state information... 152s Solving dependencies... 152s The following NEW packages will be installed: 152s build-essential cpp cpp-15 cpp-15-aarch64-linux-gnu cpp-aarch64-linux-gnu 152s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 152s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 152s g++ g++-15 g++-15-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-15 152s gcc-15-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-15 152s gfortran-15-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 152s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 152s libboost-dev libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 152s libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 152s libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 libgraphite2-3 152s libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl libisl23 152s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 152s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 152s libjs-highlight.js libjs-jquery libjs-jquery-datatables 152s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 152s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 152s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 152s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 152s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev 152s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 152s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 152s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libreadline-dev 152s libsharpyuv0 libsm6 libstdc++-15-dev libsynctex2 libtcl8.6 libteckit0 152s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 152s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 152s libxpm4 libxrender1 libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 152s linux-libc-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 152s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 152s r-bioc-annotate r-bioc-annotationdbi r-bioc-annotationfilter 152s r-bioc-annotationhub r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 152s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion 152s r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray r-bioc-deseq2 152s r-bioc-dexseq r-bioc-edger r-bioc-ensembldb r-bioc-genefilter 152s r-bioc-geneplotter r-bioc-genomeinfodb r-bioc-genomeinfodbdata 152s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 152s r-bioc-iranges r-bioc-keggrest r-bioc-limma r-bioc-matrixgenerics 152s r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 152s r-bioc-s4arrays r-bioc-s4vectors r-bioc-saturn r-bioc-sparsearray 152s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 152s r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager 152s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown 152s r-cran-boot r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli 152s r-cran-codetools r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon 152s r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-desc r-cran-diffobj 152s r-cran-digest r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-farver 152s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 152s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggplot2 152s r-cran-glue r-cran-gtable r-cran-highr r-cran-hms r-cran-htmltools 152s r-cran-httpuv r-cran-httr r-cran-httr2 r-cran-hwriter r-cran-isoband 152s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 152s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 152s r-cran-littler r-cran-locfdr r-cran-locfit r-cran-magrittr r-cran-matrix 152s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pbapply 152s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 152s r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise r-cran-prettyunits 152s r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-purrr 152s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp 152s r-cran-rcpparmadillo r-cran-rcurl r-cran-restfulr r-cran-rex r-cran-rjson 152s r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-rsqlite r-cran-s7 152s r-cran-sass r-cran-scales r-cran-shiny r-cran-snow r-cran-sourcetools 152s r-cran-statmod r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 152s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 152s r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-waldo r-cran-withr 152s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 152s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 152s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 152s 0 upgraded, 319 newly installed, 0 to remove and 0 not upgraded. 152s Need to get 469 MB of archives. 152s After this operation, 1447 MB of additional disk space will be used. 152s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libc-dev-bin arm64 2.42-2ubuntu4 [22.5 kB] 152s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 linux-libc-dev arm64 6.19.0-3.3 [1819 kB] 155s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libcrypt-dev arm64 1:4.5.1-1 [123 kB] 155s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 rpcsvc-proto arm64 1.4.3-1build1 [65.6 kB] 155s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 libc6-dev arm64 2.42-2ubuntu4 [1765 kB] 158s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1build1 [676 kB] 159s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-2 [55.6 kB] 159s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [11.7 MB] 180s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-12ubuntu1 [1030 B] 180s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 180s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 180s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-12ubuntu1 [49.0 kB] 180s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 180s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-12ubuntu1 [27.8 kB] 180s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-12ubuntu1 [2920 kB] 190s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-12ubuntu1 [1316 kB] 193s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-12ubuntu1 [2688 kB] 197s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-12ubuntu1 [1175 kB] 199s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-12ubuntu1 [1638 kB] 202s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-12ubuntu1 [2600 kB] 206s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [23.1 MB] 246s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-12ubuntu1 [519 kB] 246s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 246s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 246s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-12ubuntu1 [2549 kB] 251s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [13.2 MB] 279s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-12ubuntu1 [25.3 kB] 279s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 279s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 279s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu2 [5254 B] 279s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 dctrl-tools arm64 2.24-3build4 [102 kB] 279s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 279s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 282s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 282s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 282s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 282s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 283s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 283s Get:39 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-lmodern all 2.005-1build1 [4788 kB] 297s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 302s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 302s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran-15-dev arm64 15.2.0-12ubuntu1 [490 kB] 302s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [12.5 MB] 337s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15 arm64 15.2.0-12ubuntu1 [18.1 kB] 337s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1022 B] 337s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran arm64 4:15.2.0-4ubuntu1 [1160 B] 337s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 icu-devtools arm64 78.2-1ubuntu1 [207 kB] 337s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1build1 [4864 B] 337s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 337s Get:50 http://ftpmaster.internal/ubuntu resolute/universe arm64 liblatex-tounicode-perl all 1.93-1 [29.2 kB] 337s Get:51 http://ftpmaster.internal/ubuntu resolute/universe arm64 libbibtex-parser-perl all 1.93+dfsg-1 [17.4 kB] 337s Get:52 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 337s Get:53 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas-dev arm64 3.12.1-7ubuntu1 [160 kB] 337s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost1.90-dev arm64 1.90.0-2ubuntu1 [11.5 MB] 361s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost-dev arm64 1.90.0.0ubuntu3 [4764 B] 361s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-dev arm64 1.0.8-6build2 [34.9 kB] 361s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 361s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 362s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 362s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 362s Get:61 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 363s Get:62 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 363s Get:63 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2build1 [46.8 kB] 363s Get:64 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate-dev arm64 1.23-2build1 [54.3 kB] 363s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 363s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.2-1 [510 kB] 363s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 363s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 363s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libicu-dev arm64 78.2-1ubuntu1 [12.5 MB] 384s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu3 [161 kB] 384s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu3 [301 kB] 384s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 384s Get:73 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 384s Get:74 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 384s Get:75 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 384s Get:76 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 384s Get:77 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 385s Get:78 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 385s Get:79 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 385s Get:80 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 385s Get:81 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 385s Get:82 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 385s Get:83 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 385s Get:84 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 385s Get:85 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 385s Get:86 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 385s Get:87 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 385s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 385s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 385s Get:90 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkpathsea6 arm64 2025.20250727.75242+ds-5build1 [65.4 kB] 385s Get:91 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 389s Get:92 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack-dev arm64 3.12.1-7ubuntu1 [4456 kB] 403s Get:93 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 403s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 403s Get:95 http://ftpmaster.internal/ubuntu resolute/universe arm64 libmpfi0 arm64 1.5.4+ds-4build1 [36.4 kB] 403s Get:96 http://ftpmaster.internal/ubuntu resolute/main arm64 libncurses-dev arm64 6.6+20251231-1 [391 kB] 403s Get:97 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 403s Get:98 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 403s Get:99 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 403s Get:100 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 403s Get:101 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 403s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 403s Get:103 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 403s Get:104 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-16-0 arm64 10.46-1 [225 kB] 403s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-32-0 arm64 10.46-1 [213 kB] 403s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-posix3 arm64 10.46-1 [7300 B] 404s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-dev arm64 10.46-1 [772 kB] 405s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 405s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 407s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libpng-dev arm64 1.6.54-1 [268 kB] 407s Get:111 http://ftpmaster.internal/ubuntu resolute/universe arm64 libpotrace0 arm64 1.16-2build2 [16.3 kB] 407s Get:112 http://ftpmaster.internal/ubuntu resolute/universe arm64 libptexenc1 arm64 2025.20250727.75242+ds-5build1 [46.2 kB] 407s Get:113 http://ftpmaster.internal/ubuntu resolute/main arm64 libreadline-dev arm64 8.3-3 [199 kB] 408s Get:114 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 408s Get:115 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1build1 [16.8 kB] 408s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsynctex2 arm64 2025.20250727.75242+ds-5build1 [61.4 kB] 408s Get:117 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1build1 [983 kB] 410s Get:118 http://ftpmaster.internal/ubuntu resolute/universe arm64 libteckit0 arm64 2.5.13+ds-1 [393 kB] 410s Get:119 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtexlua53-5 arm64 2025.20250727.75242+ds-5build1 [122 kB] 410s Get:120 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 410s Get:121 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 410s Get:122 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 410s Get:123 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 410s Get:124 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 410s Get:125 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 411s Get:126 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 411s Get:127 http://ftpmaster.internal/ubuntu resolute/main arm64 libxmu6 arm64 2:1.1.3-4 [47.6 kB] 411s Get:128 http://ftpmaster.internal/ubuntu resolute/main arm64 libxpm4 arm64 1:3.5.17-1build3 [35.5 kB] 411s Get:129 http://ftpmaster.internal/ubuntu resolute/main arm64 libxaw7 arm64 2:1.0.16-1build1 [183 kB] 411s Get:130 http://ftpmaster.internal/ubuntu resolute/main arm64 libxi6 arm64 2:1.8.2-2 [32.4 kB] 411s Get:131 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-3 [349 kB] 411s Get:132 http://ftpmaster.internal/ubuntu resolute/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.2 [30.7 kB] 411s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 411s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 411s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 411s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 411s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 470s Get:138 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu3 [170 kB] 470s Get:139 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 470s Get:140 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 470s Get:141 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 523s Get:142 http://ftpmaster.internal/ubuntu resolute/main arm64 liblzma-dev arm64 5.8.2-2 [180 kB] 523s Get:143 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 523s Get:144 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 523s Get:145 http://ftpmaster.internal/ubuntu resolute/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 523s Get:146 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 523s Get:147 http://ftpmaster.internal/ubuntu resolute/universe arm64 pkg-r-autopkgtest all 20250812 [6158 B] 524s Get:148 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 525s Get:149 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 536s Get:150 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 540s Get:151 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 544s Get:152 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1build1 [855 kB] 545s Get:153 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 545s Get:154 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit64 arm64 4.6.0-1-4 [495 kB] 545s Get:155 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 548s Get:156 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 551s Get:157 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 551s Get:158 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 551s Get:159 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 554s Get:160 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-blob all 1.3.0-1 [54.1 kB] 554s Get:161 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 554s Get:162 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 554s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 554s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 554s Get:165 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plogr all 0.2.0-3build2 [15.8 kB] 554s Get:166 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 554s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rsqlite arm64 2.3.9-1 [1247 kB] 556s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 556s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 556s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 556s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 556s Get:172 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 556s Get:173 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 556s Get:174 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 556s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 556s Get:176 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 556s Get:177 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 556s Get:178 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 557s Get:179 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 557s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 582s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 602s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 602s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 627s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 627s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 636s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xml arm64 3.99-0.20-1 [1749 kB] 639s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 640s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotate all 1.84.0+dfsg-2 [1870 kB] 644s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 647s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 647s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB] 647s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 647s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 647s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 647s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 647s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 648s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 648s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 648s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 648s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 652s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 653s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 655s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 655s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 657s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbplyr all 2.5.1+dfsg-1 [1237 kB] 659s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 659s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 659s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 659s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 659s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 659s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 659s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB] 659s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 659s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 659s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lambda.r all 1.2.4-2build2 [118 kB] 659s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB] 659s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB] 659s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB] 659s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 659s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 659s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 662s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 662s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 662s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 662s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.5-1 [117 kB] 662s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 663s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 663s Get:228 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 673s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 676s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 676s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 676s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 678s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 688s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 692s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 692s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 692s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.22-1 [85.1 kB] 692s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 692s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 697s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 697s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 697s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 697s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 697s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 697s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 697s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 703s Get:247 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 706s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 708s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 tex-common all 6.20 [30.0 kB] 708s Get:250 http://ftpmaster.internal/ubuntu resolute/main arm64 t1utils arm64 1.41-4build4 [59.8 kB] 708s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-binaries arm64 2025.20250727.75242+ds-5build1 [8302 kB] 723s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-base all 2025.20260124-1 [22.8 MB] 764s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-latex-base all 2025.20260124-1 [1321 kB] 769s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-bibtex-extra all 2025.20260124-1 [80.6 MB] 992s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 992s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hms all 1.1.4-1 [102 kB] 992s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 992s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 992s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr2 all 1.1.1-2 [752 kB] 994s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xml2 arm64 1.4.1-1 [326 kB] 994s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 994s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 996s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 1003s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 1003s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 1004s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 1004s Get:267 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 1005s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-2 [1369 kB] 1007s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 1011s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 1013s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-locfit arm64 1.5-9.12-1 [514 kB] 1013s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 1013s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 1016s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s7 arm64 0.2.0-1 [329 kB] 1016s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 1018s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 1018s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 1018s Get:278 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.3-1 [1088 kB] 1021s Get:279 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 1023s Get:280 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 1031s Get:281 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpparmadillo arm64 15.2.3-1-1 [916 kB] 1033s Get:282 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-deseq2 arm64 1.46.0+dfsg-2 [1237 kB] 1035s Get:283 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hwriter all 1.3.2.1-1 [106 kB] 1035s Get:284 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 1035s Get:285 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 1037s Get:286 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 1044s Get:287 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 1044s Get:288 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-geneplotter all 1.84.0+dfsg-2 [1508 kB] 1047s Get:289 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-6-1 [8270 kB] 1067s Get:290 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genefilter arm64 1.88.0-2 [1241 kB] 1072s Get:291 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-dexseq all 1.52.0+dfsg-2 [453 kB] 1073s Get:292 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-limma arm64 3.62.2+dfsg-1 [1968 kB] 1076s Get:293 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-edger arm64 4.4.2+dfsg-1 [1114 kB] 1079s Get:294 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 1084s Get:295 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 1085s Get:296 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 1085s Get:297 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 1085s Get:298 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rtracklayer arm64 1.66.0-3 [5216 kB] 1094s Get:299 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 1097s Get:300 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-protgenerics all 1.38.0-2 [239 kB] 1097s Get:301 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB] 1102s Get:302 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-locfdr all 1.1-8-2 [306 kB] 1103s Get:303 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 1103s Get:304 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-boot all 1.3-32-1 [636 kB] 1105s Get:305 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-saturn all 1.14.0+dfsg-2 [2955 kB] 1114s Get:306 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 1114s Get:307 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 1114s Get:308 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 1114s Get:309 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 1114s Get:310 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rex all 1.2.1-1build1 [126 kB] 1115s Get:311 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 1115s Get:312 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 1115s Get:313 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1build1 [1154 kB] 1118s Get:314 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 1118s Get:315 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.1.1-1 [131 kB] 1118s Get:316 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.1-1 [252 kB] 1118s Get:317 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 1118s Get:318 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.2-1 [153 kB] 1118s Get:319 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 1125s Preconfiguring packages ... 1125s Fetched 469 MB in 16min 12s (483 kB/s) 1125s Selecting previously unselected package libc-dev-bin. 1125s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136600 files and directories currently installed.) 1125s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_arm64.deb ... 1125s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 1125s Selecting previously unselected package linux-libc-dev:arm64. 1125s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_arm64.deb ... 1125s Unpacking linux-libc-dev:arm64 (6.19.0-3.3) ... 1125s Selecting previously unselected package libcrypt-dev:arm64. 1125s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_arm64.deb ... 1125s Unpacking libcrypt-dev:arm64 (1:4.5.1-1) ... 1125s Selecting previously unselected package rpcsvc-proto. 1125s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_arm64.deb ... 1125s Unpacking rpcsvc-proto (1.4.3-1build1) ... 1125s Selecting previously unselected package libc6-dev:arm64. 1125s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_arm64.deb ... 1125s Unpacking libc6-dev:arm64 (2.42-2ubuntu4) ... 1125s Selecting previously unselected package libisl23:arm64. 1125s Preparing to unpack .../005-libisl23_0.27-1build1_arm64.deb ... 1125s Unpacking libisl23:arm64 (0.27-1build1) ... 1125s Selecting previously unselected package libmpc3:arm64. 1125s Preparing to unpack .../006-libmpc3_1.3.1-2_arm64.deb ... 1125s Unpacking libmpc3:arm64 (1.3.1-2) ... 1125s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 1125s Preparing to unpack .../007-cpp-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1125s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package cpp-15. 1126s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package cpp-aarch64-linux-gnu. 1126s Preparing to unpack .../009-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1126s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1126s Selecting previously unselected package cpp. 1126s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 1126s Unpacking cpp (4:15.2.0-4ubuntu1) ... 1126s Selecting previously unselected package libcc1-0:arm64. 1126s Preparing to unpack .../011-libcc1-0_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libcc1-0:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package libgomp1:arm64. 1126s Preparing to unpack .../012-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package libitm1:arm64. 1126s Preparing to unpack .../013-libitm1_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libitm1:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package libasan8:arm64. 1126s Preparing to unpack .../014-libasan8_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libasan8:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package liblsan0:arm64. 1126s Preparing to unpack .../015-liblsan0_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking liblsan0:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package libtsan2:arm64. 1126s Preparing to unpack .../016-libtsan2_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libtsan2:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package libubsan1:arm64. 1126s Preparing to unpack .../017-libubsan1_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libubsan1:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package libhwasan0:arm64. 1126s Preparing to unpack .../018-libhwasan0_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libhwasan0:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package libgcc-15-dev:arm64. 1126s Preparing to unpack .../019-libgcc-15-dev_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 1126s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 1126s Preparing to unpack .../020-gcc-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1126s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1127s Selecting previously unselected package gcc-15. 1127s Preparing to unpack .../021-gcc-15_15.2.0-12ubuntu1_arm64.deb ... 1127s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 1127s Selecting previously unselected package gcc-aarch64-linux-gnu. 1127s Preparing to unpack .../022-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1127s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1127s Selecting previously unselected package gcc. 1127s Preparing to unpack .../023-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 1127s Unpacking gcc (4:15.2.0-4ubuntu1) ... 1127s Selecting previously unselected package libstdc++-15-dev:arm64. 1127s Preparing to unpack .../024-libstdc++-15-dev_15.2.0-12ubuntu1_arm64.deb ... 1127s Unpacking libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 1127s Selecting previously unselected package g++-15-aarch64-linux-gnu. 1127s Preparing to unpack .../025-g++-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1127s Unpacking g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1127s Selecting previously unselected package g++-15. 1127s Preparing to unpack .../026-g++-15_15.2.0-12ubuntu1_arm64.deb ... 1127s Unpacking g++-15 (15.2.0-12ubuntu1) ... 1127s Selecting previously unselected package g++-aarch64-linux-gnu. 1127s Preparing to unpack .../027-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1127s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1127s Selecting previously unselected package g++. 1128s Preparing to unpack .../028-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 1128s Unpacking g++ (4:15.2.0-4ubuntu1) ... 1128s Selecting previously unselected package build-essential. 1128s Preparing to unpack .../029-build-essential_12.12ubuntu2_arm64.deb ... 1128s Unpacking build-essential (12.12ubuntu2) ... 1128s Selecting previously unselected package dctrl-tools. 1128s Preparing to unpack .../030-dctrl-tools_2.24-3build4_arm64.deb ... 1128s Unpacking dctrl-tools (2.24-3build4) ... 1128s Selecting previously unselected package fonts-dejavu-mono. 1128s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8build1_all.deb ... 1128s Unpacking fonts-dejavu-mono (2.37-8build1) ... 1128s Selecting previously unselected package fonts-dejavu-core. 1128s Preparing to unpack .../032-fonts-dejavu-core_2.37-8build1_all.deb ... 1128s Unpacking fonts-dejavu-core (2.37-8build1) ... 1128s Selecting previously unselected package fontconfig-config. 1128s Preparing to unpack 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unselected package fonts-lmodern. 1128s Preparing to unpack .../038-fonts-lmodern_2.005-1build1_all.deb ... 1128s Unpacking fonts-lmodern (2.005-1build1) ... 1128s Selecting previously unselected package fonts-mathjax. 1128s Preparing to unpack .../039-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 1128s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 1128s Selecting previously unselected package libgfortran5:arm64. 1128s Preparing to unpack .../040-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 1128s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 1128s Selecting previously unselected package libgfortran-15-dev:arm64. 1128s Preparing to unpack .../041-libgfortran-15-dev_15.2.0-12ubuntu1_arm64.deb ... 1128s Unpacking libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 1129s Selecting previously unselected package gfortran-15-aarch64-linux-gnu. 1129s Preparing to unpack .../042-gfortran-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1129s Unpacking gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1129s Selecting previously unselected package gfortran-15. 1129s Preparing to unpack .../043-gfortran-15_15.2.0-12ubuntu1_arm64.deb ... 1129s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 1129s Selecting previously unselected package gfortran-aarch64-linux-gnu. 1129s Preparing to unpack .../044-gfortran-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1129s Unpacking gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1129s Selecting previously unselected package gfortran. 1129s Preparing to unpack .../045-gfortran_4%3a15.2.0-4ubuntu1_arm64.deb ... 1129s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 1129s Selecting previously unselected package icu-devtools. 1129s Preparing to unpack .../046-icu-devtools_78.2-1ubuntu1_arm64.deb ... 1129s Unpacking icu-devtools (78.2-1ubuntu1) ... 1129s Selecting previously unselected package javascript-common. 1129s Preparing to unpack .../047-javascript-common_12+nmu1build1_all.deb ... 1129s Unpacking javascript-common (12+nmu1build1) ... 1129s Selecting previously unselected package libio-string-perl. 1129s Preparing to unpack .../048-libio-string-perl_1.08-4_all.deb ... 1129s Unpacking libio-string-perl (1.08-4) ... 1129s Selecting previously unselected package liblatex-tounicode-perl. 1129s Preparing to unpack .../049-liblatex-tounicode-perl_1.93-1_all.deb ... 1129s Unpacking liblatex-tounicode-perl (1.93-1) ... 1129s Selecting previously unselected package libbibtex-parser-perl. 1129s Preparing to unpack .../050-libbibtex-parser-perl_1.93+dfsg-1_all.deb ... 1129s Unpacking libbibtex-parser-perl (1.93+dfsg-1) ... 1129s Selecting previously unselected package libblas3:arm64. 1129s Preparing to unpack .../051-libblas3_3.12.1-7ubuntu1_arm64.deb ... 1129s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 1129s Selecting previously unselected package libblas-dev:arm64. 1129s Preparing to unpack .../052-libblas-dev_3.12.1-7ubuntu1_arm64.deb ... 1129s Unpacking libblas-dev:arm64 (3.12.1-7ubuntu1) ... 1129s Selecting previously unselected package libboost1.90-dev:arm64. 1129s Preparing to unpack .../053-libboost1.90-dev_1.90.0-2ubuntu1_arm64.deb ... 1129s Unpacking libboost1.90-dev:arm64 (1.90.0-2ubuntu1) ... 1131s Selecting previously unselected package libboost-dev:arm64. 1131s Preparing to unpack .../054-libboost-dev_1.90.0.0ubuntu3_arm64.deb ... 1131s Unpacking libboost-dev:arm64 (1.90.0.0ubuntu3) ... 1131s Selecting previously unselected package libbz2-dev:arm64. 1131s Preparing to unpack .../055-libbz2-dev_1.0.8-6build2_arm64.deb ... 1131s Unpacking libbz2-dev:arm64 (1.0.8-6build2) ... 1131s Selecting previously unselected package libpixman-1-0:arm64. 1131s Preparing to unpack .../056-libpixman-1-0_0.46.4-1_arm64.deb ... 1131s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 1131s Selecting previously unselected package libxcb-render0:arm64. 1131s Preparing to unpack .../057-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 1131s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 1131s Selecting previously unselected package libxcb-shm0:arm64. 1131s Preparing to unpack .../058-libxcb-shm0_1.17.0-2ubuntu1_arm64.deb ... 1131s Unpacking libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 1131s Selecting previously unselected package libxrender1:arm64. 1131s Preparing to unpack .../059-libxrender1_1%3a0.9.12-1_arm64.deb ... 1131s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 1131s Selecting previously unselected package libcairo2:arm64. 1131s Preparing to unpack .../060-libcairo2_1.18.4-3_arm64.deb ... 1131s Unpacking libcairo2:arm64 (1.18.4-3) ... 1131s Selecting previously unselected package libdatrie1:arm64. 1131s Preparing to unpack .../061-libdatrie1_0.2.14-1_arm64.deb ... 1131s Unpacking libdatrie1:arm64 (0.2.14-1) ... 1131s Selecting previously unselected package libdeflate0:arm64. 1131s Preparing to unpack .../062-libdeflate0_1.23-2build1_arm64.deb ... 1131s Unpacking libdeflate0:arm64 (1.23-2build1) ... 1131s Selecting previously unselected package libdeflate-dev:arm64. 1131s Preparing to unpack .../063-libdeflate-dev_1.23-2build1_arm64.deb ... 1131s Unpacking libdeflate-dev:arm64 (1.23-2build1) ... 1131s Selecting previously unselected package libgraphite2-3:arm64. 1131s Preparing to unpack .../064-libgraphite2-3_1.3.14-11ubuntu1_arm64.deb ... 1131s Unpacking libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 1131s Selecting previously unselected package libharfbuzz0b:arm64. 1131s Preparing to unpack .../065-libharfbuzz0b_12.3.2-1_arm64.deb ... 1131s Unpacking libharfbuzz0b:arm64 (12.3.2-1) ... 1131s Selecting previously unselected package x11-common. 1131s Preparing to unpack .../066-x11-common_1%3a7.7+24ubuntu1_all.deb ... 1131s Unpacking x11-common (1:7.7+24ubuntu1) ... 1131s Selecting previously unselected package libice6:arm64. 1131s Preparing to unpack .../067-libice6_2%3a1.1.1-1build1_arm64.deb ... 1131s Unpacking libice6:arm64 (2:1.1.1-1build1) ... 1131s Selecting previously unselected package libicu-dev:arm64. 1132s Preparing to unpack .../068-libicu-dev_78.2-1ubuntu1_arm64.deb ... 1132s Unpacking libicu-dev:arm64 (78.2-1ubuntu1) ... 1132s Selecting previously unselected package libjpeg-turbo8:arm64. 1132s Preparing to unpack .../069-libjpeg-turbo8_2.1.5-4ubuntu3_arm64.deb ... 1132s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu3) ... 1132s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 1132s Preparing to unpack .../070-libjpeg-turbo8-dev_2.1.5-4ubuntu3_arm64.deb ... 1132s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu3) ... 1132s Selecting previously unselected package libjpeg8:arm64. 1132s Preparing to unpack .../071-libjpeg8_8c-2ubuntu11_arm64.deb ... 1132s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 1132s Selecting previously unselected package libjpeg8-dev:arm64. 1132s Preparing to unpack .../072-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 1132s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1132s Selecting previously unselected package libjpeg-dev:arm64. 1132s Preparing to unpack .../073-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 1132s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 1132s Selecting previously unselected package libjs-bootstrap. 1132s Preparing to unpack .../074-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 1132s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 1132s Selecting previously unselected package libjs-popper.js. 1132s Preparing to unpack .../075-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 1132s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 1132s Selecting previously unselected package libjs-bootstrap4. 1132s Preparing to unpack .../076-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 1132s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 1132s Selecting previously unselected package libjs-d3. 1132s Preparing to unpack .../077-libjs-d3_3.5.17-4build1_all.deb ... 1132s Unpacking libjs-d3 (3.5.17-4build1) ... 1132s Selecting previously unselected package libjs-es5-shim. 1132s Preparing to unpack .../078-libjs-es5-shim_4.6.7-2_all.deb ... 1132s Unpacking libjs-es5-shim (4.6.7-2) ... 1132s Selecting previously unselected package libjs-highlight.js. 1132s Preparing to unpack .../079-libjs-highlight.js_10.7.3+dfsg-2_all.deb ... 1132s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ... 1132s Selecting previously unselected package libjs-jquery. 1132s Preparing to unpack .../080-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 1132s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 1133s Selecting previously unselected package libjs-jquery-datatables. 1133s Preparing to unpack .../081-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 1133s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 1133s Selecting previously unselected package libjs-sifter.js. 1133s Preparing to unpack .../082-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 1133s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 1133s Selecting previously unselected package libjs-microplugin.js. 1133s Preparing to unpack .../083-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ... 1133s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ... 1133s Selecting previously unselected package libjs-jquery-selectize.js. 1133s Preparing to unpack .../084-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 1133s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1133s Selecting previously unselected package libjs-jquery-ui. 1133s Preparing to unpack .../085-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 1133s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 1133s Selecting previously unselected package libjs-json. 1133s Preparing to unpack .../086-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 1133s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 1133s Selecting previously unselected package libjs-lunr. 1133s Preparing to unpack .../087-libjs-lunr_2.3.9~dfsg-2_all.deb ... 1133s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 1133s Selecting previously unselected package libjs-prettify. 1133s Preparing to unpack .../088-libjs-prettify_2015.12.04+dfsg-3_all.deb ... 1133s Unpacking libjs-prettify (2015.12.04+dfsg-3) ... 1133s Selecting previously unselected package libkpathsea6:arm64. 1133s Preparing to unpack .../089-libkpathsea6_2025.20250727.75242+ds-5build1_arm64.deb ... 1133s Unpacking libkpathsea6:arm64 (2025.20250727.75242+ds-5build1) ... 1133s Selecting previously unselected package liblapack3:arm64. 1133s Preparing to unpack .../090-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 1133s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 1133s Selecting previously unselected package liblapack-dev:arm64. 1133s Preparing to unpack .../091-liblapack-dev_3.12.1-7ubuntu1_arm64.deb ... 1133s Unpacking liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 1133s Selecting previously unselected package liblerc4:arm64. 1133s Preparing to unpack .../092-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 1133s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 1133s Selecting previously unselected package liblua5.4-0:arm64. 1133s Preparing to unpack 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libpango-1.0-0:arm64 (1.57.0-1) ... 1134s Selecting previously unselected package libpangoft2-1.0-0:arm64. 1134s Preparing to unpack .../099-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 1134s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 1134s Selecting previously unselected package libpangocairo-1.0-0:arm64. 1134s Preparing to unpack .../100-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 1134s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 1134s Selecting previously unselected package libpaper2:arm64. 1134s Preparing to unpack .../101-libpaper2_2.2.5-0.3build1_arm64.deb ... 1134s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 1134s Selecting previously unselected package libpaper-utils. 1134s Preparing to unpack .../102-libpaper-utils_2.2.5-0.3build1_arm64.deb ... 1134s Unpacking libpaper-utils (2.2.5-0.3build1) ... 1134s Selecting previously unselected package libpcre2-16-0:arm64. 1134s Preparing to unpack .../103-libpcre2-16-0_10.46-1_arm64.deb ... 1134s Unpacking libpcre2-16-0:arm64 (10.46-1) ... 1134s Selecting previously unselected package libpcre2-32-0:arm64. 1134s Preparing to unpack .../104-libpcre2-32-0_10.46-1_arm64.deb ... 1134s Unpacking libpcre2-32-0:arm64 (10.46-1) ... 1134s Selecting previously unselected package libpcre2-posix3:arm64. 1134s Preparing to unpack .../105-libpcre2-posix3_10.46-1_arm64.deb ... 1134s Unpacking libpcre2-posix3:arm64 (10.46-1) ... 1134s Selecting previously unselected package libpcre2-dev:arm64. 1134s Preparing to unpack .../106-libpcre2-dev_10.46-1_arm64.deb ... 1134s Unpacking libpcre2-dev:arm64 (10.46-1) ... 1134s Selecting previously unselected package libpkgconf3:arm64. 1134s Preparing to unpack .../107-libpkgconf3_1.8.1-4build1_arm64.deb ... 1134s Unpacking libpkgconf3:arm64 (1.8.1-4build1) ... 1134s Selecting previously unselected package zlib1g-dev:arm64. 1134s Preparing to unpack .../108-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 1134s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 1134s Selecting previously unselected package libpng-dev:arm64. 1134s Preparing to unpack .../109-libpng-dev_1.6.54-1_arm64.deb ... 1134s Unpacking libpng-dev:arm64 (1.6.54-1) ... 1134s Selecting previously unselected package libpotrace0:arm64. 1134s Preparing to unpack .../110-libpotrace0_1.16-2build2_arm64.deb ... 1134s Unpacking libpotrace0:arm64 (1.16-2build2) ... 1134s Selecting previously unselected package libptexenc1:arm64. 1134s Preparing to unpack .../111-libptexenc1_2025.20250727.75242+ds-5build1_arm64.deb ... 1134s Unpacking libptexenc1:arm64 (2025.20250727.75242+ds-5build1) ... 1134s Selecting previously unselected package libreadline-dev:arm64. 1134s Preparing to unpack .../112-libreadline-dev_8.3-3_arm64.deb ... 1134s Unpacking libreadline-dev:arm64 (8.3-3) ... 1134s Selecting previously unselected package libsharpyuv0:arm64. 1134s Preparing to unpack .../113-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 1134s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 1134s Selecting previously unselected package libsm6:arm64. 1134s Preparing to unpack .../114-libsm6_2%3a1.2.6-1build1_arm64.deb ... 1134s Unpacking libsm6:arm64 (2:1.2.6-1build1) ... 1134s Selecting previously unselected package libsynctex2:arm64. 1134s Preparing to unpack .../115-libsynctex2_2025.20250727.75242+ds-5build1_arm64.deb ... 1134s Unpacking libsynctex2:arm64 (2025.20250727.75242+ds-5build1) ... 1134s Selecting previously unselected package libtcl8.6:arm64. 1135s Preparing to unpack .../116-libtcl8.6_8.6.17+dfsg-1build1_arm64.deb ... 1135s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1build1) ... 1135s Selecting previously unselected package libteckit0:arm64. 1135s Preparing to unpack .../117-libteckit0_2.5.13+ds-1_arm64.deb ... 1135s Unpacking libteckit0:arm64 (2.5.13+ds-1) ... 1135s Selecting previously unselected package libtexlua53-5:arm64. 1135s Preparing to unpack .../118-libtexlua53-5_2025.20250727.75242+ds-5build1_arm64.deb ... 1135s Unpacking libtexlua53-5:arm64 (2025.20250727.75242+ds-5build1) ... 1135s Selecting previously unselected package libjbig0:arm64. 1135s Preparing to unpack .../119-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 1135s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 1135s Selecting previously unselected package libwebp7:arm64. 1135s Preparing to unpack .../120-libwebp7_1.5.0-0.1build1_arm64.deb ... 1135s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 1135s Selecting previously unselected package libtiff6:arm64. 1135s Preparing to unpack .../121-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 1135s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 1135s Selecting previously unselected package libxft2:arm64. 1135s Preparing to unpack .../122-libxft2_2.3.6-1build2_arm64.deb ... 1135s Unpacking libxft2:arm64 (2.3.6-1build2) ... 1135s Selecting previously unselected package libxss1:arm64. 1135s Preparing to unpack .../123-libxss1_1%3a1.2.3-1build4_arm64.deb ... 1135s Unpacking libxss1:arm64 (1:1.2.3-1build4) ... 1135s Selecting previously unselected package libtk8.6:arm64. 1135s Preparing to unpack .../124-libtk8.6_8.6.17-1_arm64.deb ... 1135s Unpacking libtk8.6:arm64 (8.6.17-1) ... 1135s Selecting previously unselected package libxt6t64:arm64. 1135s Preparing to unpack .../125-libxt6t64_1%3a1.2.1-1.3_arm64.deb ... 1135s Unpacking libxt6t64:arm64 (1:1.2.1-1.3) ... 1135s Selecting previously unselected package libxmu6:arm64. 1135s Preparing to unpack .../126-libxmu6_2%3a1.1.3-4_arm64.deb ... 1135s Unpacking libxmu6:arm64 (2:1.1.3-4) ... 1135s Selecting previously unselected package libxpm4:arm64. 1135s Preparing to unpack .../127-libxpm4_1%3a3.5.17-1build3_arm64.deb ... 1135s Unpacking libxpm4:arm64 (1:3.5.17-1build3) ... 1135s Selecting previously unselected package libxaw7:arm64. 1135s Preparing to unpack .../128-libxaw7_2%3a1.0.16-1build1_arm64.deb ... 1135s Unpacking libxaw7:arm64 (2:1.0.16-1build1) ... 1135s Selecting previously unselected package libxi6:arm64. 1135s Preparing to unpack .../129-libxi6_2%3a1.8.2-2_arm64.deb ... 1135s Unpacking libxi6:arm64 (2:1.8.2-2) ... 1135s Selecting previously unselected package libzstd-dev:arm64. 1135s Preparing to unpack .../130-libzstd-dev_1.5.7+dfsg-3_arm64.deb ... 1135s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-3) ... 1135s Selecting previously unselected package libzzip-0-13t64:arm64. 1135s Preparing to unpack .../131-libzzip-0-13t64_0.13.78+dfsg.1-0.2_arm64.deb ... 1135s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.2) ... 1135s Selecting previously unselected package node-bootstrap-sass. 1135s Preparing to unpack .../132-node-bootstrap-sass_3.4.3-2_all.deb ... 1135s Unpacking node-bootstrap-sass (3.4.3-2) ... 1135s Selecting previously unselected package node-html5shiv. 1136s Preparing to unpack .../133-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1136s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1136s Selecting previously unselected package node-normalize.css. 1136s Preparing to unpack .../134-node-normalize.css_8.0.1-5.1_all.deb ... 1136s Unpacking node-normalize.css (8.0.1-5.1) ... 1136s Selecting previously unselected package pandoc-data. 1136s Preparing to unpack .../135-pandoc-data_3.1.11.1-3build1_all.deb ... 1136s Unpacking pandoc-data (3.1.11.1-3build1) ... 1136s Selecting previously unselected package pandoc. 1136s Preparing to unpack .../136-pandoc_3.1.11.1+ds-4_arm64.deb ... 1136s Unpacking pandoc (3.1.11.1+ds-4) ... 1137s Selecting previously unselected package zip. 1137s Preparing to unpack .../137-zip_3.0-15ubuntu3_arm64.deb ... 1137s Unpacking zip (3.0-15ubuntu3) ... 1137s Selecting previously unselected package unzip. 1137s Preparing to unpack .../138-unzip_6.0-29ubuntu1_arm64.deb ... 1137s Unpacking unzip (6.0-29ubuntu1) ... 1137s Selecting previously unselected package xdg-utils. 1137s Preparing to unpack .../139-xdg-utils_1.2.1-2ubuntu2_all.deb ... 1137s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 1137s Selecting previously unselected package r-base-core. 1137s Preparing to unpack .../140-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 1137s Unpacking r-base-core (4.5.2-1ubuntu2) ... 1137s Selecting previously unselected package liblzma-dev:arm64. 1137s Preparing to unpack .../141-liblzma-dev_5.8.2-2_arm64.deb ... 1137s Unpacking liblzma-dev:arm64 (5.8.2-2) ... 1137s Selecting previously unselected package pkgconf-bin. 1137s Preparing to unpack .../142-pkgconf-bin_1.8.1-4build1_arm64.deb ... 1137s Unpacking pkgconf-bin (1.8.1-4build1) ... 1137s Selecting previously unselected package pkgconf:arm64. 1137s Preparing to unpack .../143-pkgconf_1.8.1-4build1_arm64.deb ... 1137s Unpacking pkgconf:arm64 (1.8.1-4build1) ... 1137s Selecting previously unselected package libtirpc-dev:arm64. 1137s Preparing to unpack .../144-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 1137s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 1137s Selecting previously unselected package r-base-dev. 1137s Preparing to unpack .../145-r-base-dev_4.5.2-1ubuntu2_all.deb ... 1137s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 1137s Selecting previously unselected package pkg-r-autopkgtest. 1137s Preparing to unpack .../146-pkg-r-autopkgtest_20250812_all.deb ... 1137s Unpacking pkg-r-autopkgtest (20250812) ... 1137s Selecting previously unselected package r-bioc-biocgenerics. 1137s Preparing to unpack .../147-r-bioc-biocgenerics_0.52.0-2_all.deb ... 1137s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 1137s Selecting previously unselected package r-bioc-biobase. 1137s Preparing to unpack .../148-r-bioc-biobase_2.66.0-2_arm64.deb ... 1137s Unpacking r-bioc-biobase (2.66.0-2) ... 1137s Selecting previously unselected package r-bioc-s4vectors. 1137s Preparing to unpack .../149-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 1137s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 1137s Selecting previously unselected package r-bioc-iranges. 1138s Preparing to unpack .../150-r-bioc-iranges_2.40.1-3_arm64.deb ... 1138s Unpacking r-bioc-iranges (2.40.1-3) ... 1138s Selecting previously unselected package r-cran-dbi. 1138s Preparing to unpack .../151-r-cran-dbi_1.2.3-1build1_all.deb ... 1138s Unpacking r-cran-dbi (1.2.3-1build1) ... 1138s Selecting previously unselected package r-cran-bit. 1138s Preparing to unpack .../152-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 1138s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 1138s Selecting previously unselected package r-cran-bit64. 1138s Preparing to unpack .../153-r-cran-bit64_4.6.0-1-4_arm64.deb ... 1138s Unpacking r-cran-bit64 (4.6.0-1-4) ... 1138s Selecting previously unselected package r-cran-rlang. 1138s Preparing to unpack .../154-r-cran-rlang_1.1.5-3_arm64.deb ... 1138s Unpacking r-cran-rlang (1.1.5-3) ... 1138s Selecting previously unselected package r-cran-cli. 1138s Preparing to unpack .../155-r-cran-cli_3.6.4-1_arm64.deb ... 1138s Unpacking r-cran-cli (3.6.4-1) ... 1138s Selecting previously unselected package r-cran-glue. 1138s Preparing to unpack .../156-r-cran-glue_1.8.0-1_arm64.deb ... 1138s Unpacking r-cran-glue (1.8.0-1) ... 1138s Selecting previously unselected package r-cran-lifecycle. 1138s Preparing to unpack .../157-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 1138s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 1138s Selecting previously unselected package r-cran-vctrs. 1138s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_arm64.deb ... 1138s Unpacking r-cran-vctrs (0.6.5-1) ... 1138s Selecting previously unselected package r-cran-blob. 1138s Preparing to unpack .../159-r-cran-blob_1.3.0-1_all.deb ... 1138s Unpacking r-cran-blob (1.3.0-1) ... 1138s Selecting previously unselected package r-cran-fastmap. 1138s Preparing to unpack .../160-r-cran-fastmap_1.2.0-1_arm64.deb ... 1138s Unpacking r-cran-fastmap (1.2.0-1) ... 1138s Selecting previously unselected package r-cran-cachem. 1138s Preparing to unpack .../161-r-cran-cachem_1.1.0-1_arm64.deb ... 1138s Unpacking r-cran-cachem (1.1.0-1) ... 1138s Selecting previously unselected package r-cran-memoise. 1138s Preparing to unpack .../162-r-cran-memoise_2.0.1-1build1_all.deb ... 1138s Unpacking r-cran-memoise (2.0.1-1build1) ... 1138s Selecting previously unselected package r-cran-pkgconfig. 1138s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 1138s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 1138s Selecting previously unselected package r-cran-plogr. 1138s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build2_all.deb ... 1138s Unpacking r-cran-plogr (0.2.0-3build2) ... 1138s Selecting previously unselected package r-cran-cpp11. 1138s Preparing to unpack .../165-r-cran-cpp11_0.5.3-1_all.deb ... 1138s Unpacking r-cran-cpp11 (0.5.3-1) ... 1138s Selecting previously unselected package r-cran-rsqlite. 1138s Preparing to unpack .../166-r-cran-rsqlite_2.3.9-1_arm64.deb ... 1138s Unpacking r-cran-rsqlite (2.3.9-1) ... 1138s Selecting previously unselected package r-cran-curl. 1139s Preparing to unpack .../167-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 1139s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 1139s Selecting previously unselected package r-cran-jsonlite. 1139s Preparing to unpack .../168-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 1139s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 1139s Selecting previously unselected package r-cran-mime. 1139s Preparing to unpack .../169-r-cran-mime_0.12-2_arm64.deb ... 1139s Unpacking r-cran-mime (0.12-2) ... 1139s Selecting previously unselected package r-cran-sys. 1139s Preparing to unpack .../170-r-cran-sys_3.4.3-1_arm64.deb ... 1139s Unpacking r-cran-sys (3.4.3-1) ... 1139s Selecting previously unselected package r-cran-askpass. 1139s Preparing to unpack .../171-r-cran-askpass_1.2.1-1_arm64.deb ... 1139s Unpacking r-cran-askpass (1.2.1-1) ... 1139s Selecting previously unselected package r-cran-openssl. 1139s Preparing to unpack .../172-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 1139s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 1139s Selecting previously unselected package r-cran-r6. 1139s Preparing to unpack .../173-r-cran-r6_2.6.1-1_all.deb ... 1139s Unpacking r-cran-r6 (2.6.1-1) ... 1139s Selecting previously unselected package r-cran-httr. 1139s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1139s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1139s Selecting previously unselected package r-cran-png. 1139s Preparing to unpack .../175-r-cran-png_0.1-8-1build2_arm64.deb ... 1139s Unpacking r-cran-png (0.1-8-1build2) ... 1139s Selecting previously unselected package r-bioc-zlibbioc. 1139s Preparing to unpack .../176-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 1139s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 1139s Selecting previously unselected package r-bioc-xvector. 1139s Preparing to unpack .../177-r-bioc-xvector_0.46.0-2_arm64.deb ... 1139s Unpacking r-bioc-xvector (0.46.0-2) ... 1139s Selecting previously unselected package r-bioc-ucsc.utils. 1139s Preparing to unpack .../178-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 1139s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 1139s Selecting previously unselected package r-bioc-genomeinfodbdata. 1139s Preparing to unpack .../179-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 1139s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 1139s Selecting previously unselected package r-bioc-genomeinfodb. 1139s Preparing to unpack .../180-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 1139s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 1139s Selecting previously unselected package r-cran-crayon. 1139s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ... 1139s Unpacking r-cran-crayon (1.5.3-1) ... 1139s Selecting previously unselected package r-bioc-biostrings. 1139s Preparing to unpack .../182-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 1139s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 1139s Selecting previously unselected package r-bioc-keggrest. 1139s Preparing to unpack .../183-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 1139s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 1139s Selecting previously unselected package r-bioc-annotationdbi. 1140s Preparing to unpack .../184-r-bioc-annotationdbi_1.68.0-2_all.deb ... 1140s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 1140s Selecting previously unselected package r-cran-xml. 1140s Preparing to unpack .../185-r-cran-xml_3.99-0.20-1_arm64.deb ... 1140s Unpacking r-cran-xml (3.99-0.20-1) ... 1140s Selecting previously unselected package r-cran-xtable. 1140s Preparing to unpack .../186-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 1140s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 1140s Selecting previously unselected package r-bioc-annotate. 1140s Preparing to unpack .../187-r-bioc-annotate_1.84.0+dfsg-2_all.deb ... 1140s Unpacking r-bioc-annotate (1.84.0+dfsg-2) ... 1140s Selecting previously unselected package r-bioc-genomicranges. 1140s Preparing to unpack .../188-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 1140s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 1140s Selecting previously unselected package r-cran-lazyeval. 1140s Preparing to unpack .../189-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 1140s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 1140s Selecting previously unselected package r-bioc-annotationfilter. 1140s Preparing to unpack .../190-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ... 1140s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ... 1140s Selecting previously unselected package r-cran-generics. 1140s Preparing to unpack .../191-r-cran-generics_0.1.4-1_all.deb ... 1140s Unpacking r-cran-generics (0.1.4-1) ... 1140s Selecting previously unselected package r-cran-magrittr. 1140s Preparing to unpack .../192-r-cran-magrittr_2.0.3-1_arm64.deb ... 1140s Unpacking r-cran-magrittr (2.0.3-1) ... 1140s Selecting previously unselected package r-cran-utf8. 1140s Preparing to unpack .../193-r-cran-utf8_1.2.4-1_arm64.deb ... 1140s Unpacking r-cran-utf8 (1.2.4-1) ... 1140s Selecting previously unselected package r-cran-pillar. 1140s Preparing to unpack .../194-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 1140s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 1140s Selecting previously unselected package r-cran-fansi. 1140s Preparing to unpack .../195-r-cran-fansi_1.0.6-2_arm64.deb ... 1140s Unpacking r-cran-fansi (1.0.6-2) ... 1140s Selecting previously unselected package r-cran-tibble. 1140s Preparing to unpack .../196-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 1140s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 1140s Selecting previously unselected package r-cran-withr. 1140s Preparing to unpack .../197-r-cran-withr_3.0.2+dfsg-1_all.deb ... 1140s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 1140s Selecting previously unselected package r-cran-tidyselect. 1140s Preparing to unpack .../198-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 1140s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 1140s Selecting previously unselected package r-cran-dplyr. 1140s Preparing to unpack .../199-r-cran-dplyr_1.1.4-4_arm64.deb ... 1140s Unpacking r-cran-dplyr (1.1.4-4) ... 1140s Selecting previously unselected package r-cran-purrr. 1140s Preparing to unpack .../200-r-cran-purrr_1.0.4-1_arm64.deb ... 1140s Unpacking r-cran-purrr (1.0.4-1) ... 1141s Selecting previously unselected package r-cran-stringi. 1141s Preparing to unpack .../201-r-cran-stringi_1.8.4-1build2_arm64.deb ... 1141s Unpacking r-cran-stringi (1.8.4-1build2) ... 1141s Selecting previously unselected package r-cran-stringr. 1141s Preparing to unpack .../202-r-cran-stringr_1.5.1-1_all.deb ... 1141s Unpacking r-cran-stringr (1.5.1-1) ... 1141s Selecting previously unselected package r-cran-tidyr. 1141s Preparing to unpack .../203-r-cran-tidyr_1.3.1-1_arm64.deb ... 1141s Unpacking r-cran-tidyr (1.3.1-1) ... 1141s Selecting previously unselected package r-cran-dbplyr. 1141s Preparing to unpack .../204-r-cran-dbplyr_2.5.1+dfsg-1_all.deb ... 1141s Unpacking r-cran-dbplyr (2.5.1+dfsg-1) ... 1141s Selecting previously unselected package r-cran-filelock. 1141s Preparing to unpack .../205-r-cran-filelock_1.0.3-1_arm64.deb ... 1141s Unpacking r-cran-filelock (1.0.3-1) ... 1141s Selecting previously unselected package r-bioc-biocfilecache. 1141s Preparing to unpack .../206-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 1141s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 1141s Selecting previously unselected package r-cran-biocmanager. 1141s Preparing to unpack .../207-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 1141s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 1141s Selecting previously unselected package r-bioc-biocversion. 1141s Preparing to unpack .../208-r-bioc-biocversion_3.20.0-2_all.deb ... 1141s Unpacking r-bioc-biocversion (3.20.0-2) ... 1141s Selecting previously unselected package r-cran-rappdirs. 1141s Preparing to unpack .../209-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 1141s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 1141s Selecting previously unselected package r-cran-yaml. 1141s Preparing to unpack .../210-r-cran-yaml_2.3.10-1_arm64.deb ... 1141s Unpacking r-cran-yaml (2.3.10-1) ... 1141s Selecting previously unselected package r-bioc-annotationhub. 1141s Preparing to unpack .../211-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ... 1141s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ... 1141s Selecting previously unselected package r-bioc-biocio. 1141s Preparing to unpack .../212-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 1141s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 1141s Selecting previously unselected package r-cran-formatr. 1141s Preparing to unpack .../213-r-cran-formatr_1.14-2_all.deb ... 1141s Unpacking r-cran-formatr (1.14-2) ... 1141s Selecting previously unselected package r-cran-lambda.r. 1141s Preparing to unpack .../214-r-cran-lambda.r_1.2.4-2build2_all.deb ... 1141s Unpacking r-cran-lambda.r (1.2.4-2build2) ... 1141s Selecting previously unselected package r-cran-futile.options. 1141s Preparing to unpack .../215-r-cran-futile.options_1.0.1-3build2_all.deb ... 1141s Unpacking r-cran-futile.options (1.0.1-3build2) ... 1141s Selecting previously unselected package r-cran-futile.logger. 1141s Preparing to unpack .../216-r-cran-futile.logger_1.4.3-4build2_all.deb ... 1141s Unpacking r-cran-futile.logger (1.4.3-4build2) ... 1141s Selecting previously unselected package r-cran-snow. 1141s Preparing to unpack .../217-r-cran-snow_1%3a0.4.4-2build1_all.deb ... 1141s Unpacking r-cran-snow (1:0.4.4-2build1) ... 1141s Selecting previously unselected package r-cran-codetools. 1142s Preparing to unpack .../218-r-cran-codetools_0.2-20-1build1_all.deb ... 1142s Unpacking r-cran-codetools (0.2-20-1build1) ... 1142s Selecting previously unselected package r-cran-bh. 1142s Preparing to unpack .../219-r-cran-bh_1.84.0-1_all.deb ... 1142s Unpacking r-cran-bh (1.84.0-1) ... 1142s Selecting previously unselected package r-bioc-biocparallel. 1142s Preparing to unpack .../220-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 1142s Unpacking r-bioc-biocparallel (1.40.0-2) ... 1142s Selecting previously unselected package r-cran-base64enc. 1142s Preparing to unpack .../221-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 1142s Unpacking r-cran-base64enc (0.1-3-3build1) ... 1142s Selecting previously unselected package r-cran-digest. 1142s Preparing to unpack .../222-r-cran-digest_0.6.39-1_arm64.deb ... 1142s Unpacking r-cran-digest (0.6.39-1) ... 1142s Selecting previously unselected package r-cran-htmltools. 1142s Preparing to unpack .../223-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 1142s Unpacking r-cran-htmltools (0.5.8.1-1) ... 1142s Selecting previously unselected package r-cran-evaluate. 1142s Preparing to unpack .../224-r-cran-evaluate_1.0.5-1_all.deb ... 1142s Unpacking r-cran-evaluate (1.0.5-1) ... 1142s Selecting previously unselected package r-cran-xfun. 1142s Preparing to unpack .../225-r-cran-xfun_0.55+dfsg-1_arm64.deb ... 1142s Unpacking r-cran-xfun (0.55+dfsg-1) ... 1142s Selecting previously unselected package r-cran-highr. 1142s Preparing to unpack .../226-r-cran-highr_0.11+dfsg-1_all.deb ... 1142s Unpacking r-cran-highr (0.11+dfsg-1) ... 1142s Selecting previously unselected package libjs-mathjax. 1142s Preparing to unpack .../227-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 1142s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 1142s Selecting previously unselected package r-cran-knitr. 1142s Preparing to unpack .../228-r-cran-knitr_1.51+dfsg-1_all.deb ... 1142s Unpacking r-cran-knitr (1.51+dfsg-1) ... 1142s Selecting previously unselected package r-cran-jquerylib. 1143s Preparing to unpack .../229-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 1143s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 1143s Selecting previously unselected package r-cran-fs. 1143s Preparing to unpack .../230-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 1143s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 1143s Selecting previously unselected package r-cran-sass. 1143s Preparing to unpack .../231-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 1143s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 1143s Selecting previously unselected package r-cran-bslib. 1143s Preparing to unpack .../232-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 1143s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 1143s Selecting previously unselected package r-cran-fontawesome. 1143s Preparing to unpack .../233-r-cran-fontawesome_0.5.3-1_all.deb ... 1143s Unpacking r-cran-fontawesome (0.5.3-1) ... 1143s Selecting previously unselected package r-cran-tinytex. 1143s Preparing to unpack .../234-r-cran-tinytex_0.58-1_all.deb ... 1143s Unpacking r-cran-tinytex (0.58-1) ... 1143s Selecting previously unselected package libjs-modernizr. 1143s Preparing to unpack .../235-libjs-modernizr_3.13.0-0.1build1_all.deb ... 1143s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 1143s Selecting previously unselected package r-cran-littler. 1143s Preparing to unpack .../236-r-cran-littler_0.3.22-1_arm64.deb ... 1143s Unpacking r-cran-littler (0.3.22-1) ... 1143s Selecting previously unselected package r-cran-pkgkitten. 1143s Preparing to unpack .../237-r-cran-pkgkitten_0.2.4-1_all.deb ... 1143s Unpacking r-cran-pkgkitten (0.2.4-1) ... 1143s Selecting previously unselected package r-cran-rcpp. 1143s Preparing to unpack .../238-r-cran-rcpp_1.1.0-1_arm64.deb ... 1143s Unpacking r-cran-rcpp (1.1.0-1) ... 1143s Selecting previously unselected package r-cran-later. 1143s Preparing to unpack .../239-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 1143s Unpacking r-cran-later (1.4.1+dfsg-1) ... 1143s Selecting previously unselected package r-cran-promises. 1143s Preparing to unpack .../240-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 1143s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 1143s Selecting previously unselected package r-cran-httpuv. 1143s Preparing to unpack .../241-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 1143s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 1143s Selecting previously unselected package r-cran-sourcetools. 1143s Preparing to unpack .../242-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 1143s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1143s Selecting previously unselected package r-cran-commonmark. 1143s Preparing to unpack .../243-r-cran-commonmark_1.9.5-1_arm64.deb ... 1143s Unpacking r-cran-commonmark (1.9.5-1) ... 1143s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1143s Preparing to unpack .../244-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1143s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1144s Selecting previously unselected package r-cran-shiny. 1144s Preparing to unpack .../245-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 1144s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 1144s Selecting previously unselected package r-cran-rmarkdown. 1144s Preparing to unpack .../246-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 1144s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 1144s Selecting previously unselected package r-cran-bookdown. 1144s Preparing to unpack .../247-r-cran-bookdown_0.42+dfsg-1_all.deb ... 1144s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 1144s Selecting previously unselected package tex-common. 1144s Preparing to unpack .../248-tex-common_6.20_all.deb ... 1144s Unpacking tex-common (6.20) ... 1144s Selecting previously unselected package t1utils. 1144s Preparing to unpack .../249-t1utils_1.41-4build4_arm64.deb ... 1144s Unpacking t1utils (1.41-4build4) ... 1144s Selecting previously unselected package texlive-binaries. 1144s Preparing to unpack .../250-texlive-binaries_2025.20250727.75242+ds-5build1_arm64.deb ... 1144s Unpacking texlive-binaries (2025.20250727.75242+ds-5build1) ... 1144s Selecting previously unselected package texlive-base. 1144s Preparing to unpack .../251-texlive-base_2025.20260124-1_all.deb ... 1144s Unpacking texlive-base (2025.20260124-1) ... 1145s Selecting previously unselected package texlive-latex-base. 1145s Preparing to unpack .../252-texlive-latex-base_2025.20260124-1_all.deb ... 1145s Unpacking texlive-latex-base (2025.20260124-1) ... 1146s Selecting previously unselected package texlive-bibtex-extra. 1146s Preparing to unpack .../253-texlive-bibtex-extra_2025.20260124-1_all.deb ... 1146s Unpacking texlive-bibtex-extra (2025.20260124-1) ... 1148s Selecting previously unselected package r-bioc-biocstyle. 1148s Preparing to unpack .../254-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 1148s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 1148s Selecting previously unselected package r-cran-hms. 1148s Preparing to unpack .../255-r-cran-hms_1.1.4-1_all.deb ... 1148s Unpacking r-cran-hms (1.1.4-1) ... 1148s Selecting previously unselected package r-cran-prettyunits. 1148s Preparing to unpack .../256-r-cran-prettyunits_1.2.0-1_all.deb ... 1148s Unpacking r-cran-prettyunits (1.2.0-1) ... 1148s Selecting previously unselected package r-cran-progress. 1148s Preparing to unpack .../257-r-cran-progress_1.2.3-1_all.deb ... 1148s Unpacking r-cran-progress (1.2.3-1) ... 1148s Selecting previously unselected package r-cran-httr2. 1148s Preparing to unpack .../258-r-cran-httr2_1.1.1-2_all.deb ... 1148s Unpacking r-cran-httr2 (1.1.1-2) ... 1148s Selecting previously unselected package r-cran-xml2. 1148s Preparing to unpack .../259-r-cran-xml2_1.4.1-1_arm64.deb ... 1148s Unpacking r-cran-xml2 (1.4.1-1) ... 1148s Selecting previously unselected package r-bioc-biomart. 1148s Preparing to unpack .../260-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 1148s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 1148s Selecting previously unselected package r-cran-lattice. 1148s Preparing to unpack .../261-r-cran-lattice_0.22-7-1_arm64.deb ... 1148s Unpacking r-cran-lattice (0.22-7-1) ... 1148s Selecting previously unselected package r-cran-matrix. 1149s Preparing to unpack .../262-r-cran-matrix_1.7-4-1_arm64.deb ... 1149s Unpacking r-cran-matrix (1.7-4-1) ... 1149s Selecting previously unselected package r-cran-matrixstats. 1149s Preparing to unpack .../263-r-cran-matrixstats_1.5.0-1_arm64.deb ... 1149s Unpacking r-cran-matrixstats (1.5.0-1) ... 1149s Selecting previously unselected package r-bioc-matrixgenerics. 1149s Preparing to unpack .../264-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 1149s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 1149s Selecting previously unselected package r-cran-abind. 1149s Preparing to unpack .../265-r-cran-abind_1.4-8-1build1_all.deb ... 1149s Unpacking r-cran-abind (1.4-8-1build1) ... 1149s Selecting previously unselected package r-bioc-s4arrays. 1149s Preparing to unpack .../266-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 1149s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 1149s Selecting previously unselected package r-bioc-sparsearray. 1149s Preparing to unpack .../267-r-bioc-sparsearray_1.6.2+dfsg-2_arm64.deb ... 1149s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 1149s Selecting previously unselected package r-bioc-delayedarray. 1149s Preparing to unpack .../268-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 1149s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 1149s Selecting previously unselected package r-bioc-summarizedexperiment. 1149s Preparing to unpack .../269-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 1149s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 1149s Selecting previously unselected package r-cran-locfit. 1149s Preparing to unpack .../270-r-cran-locfit_1.5-9.12-1_arm64.deb ... 1149s Unpacking r-cran-locfit (1.5-9.12-1) ... 1149s Selecting previously unselected package r-cran-gtable. 1149s Preparing to unpack .../271-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 1149s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 1149s Selecting previously unselected package r-cran-isoband. 1149s Preparing to unpack .../272-r-cran-isoband_0.2.7-1_arm64.deb ... 1149s Unpacking r-cran-isoband (0.2.7-1) ... 1149s Selecting previously unselected package r-cran-s7. 1149s Preparing to unpack .../273-r-cran-s7_0.2.0-1_arm64.deb ... 1149s Unpacking r-cran-s7 (0.2.0-1) ... 1149s Selecting previously unselected package r-cran-farver. 1149s Preparing to unpack .../274-r-cran-farver_2.1.2-1_arm64.deb ... 1149s Unpacking r-cran-farver (2.1.2-1) ... 1149s Selecting previously unselected package r-cran-labeling. 1149s Preparing to unpack .../275-r-cran-labeling_0.4.3-1_all.deb ... 1149s Unpacking r-cran-labeling (0.4.3-1) ... 1149s Selecting previously unselected package r-cran-rcolorbrewer. 1149s Preparing to unpack .../276-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 1149s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 1149s Selecting previously unselected package r-cran-viridislite. 1149s Preparing to unpack .../277-r-cran-viridislite_0.4.3-1_all.deb ... 1149s Unpacking r-cran-viridislite (0.4.3-1) ... 1149s Selecting previously unselected package r-cran-scales. 1149s Preparing to unpack .../278-r-cran-scales_1.4.0-1_all.deb ... 1149s Unpacking r-cran-scales (1.4.0-1) ... 1150s Selecting previously unselected package r-cran-ggplot2. 1150s Preparing to unpack .../279-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 1150s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 1150s Selecting previously unselected package r-cran-rcpparmadillo. 1150s Preparing to unpack .../280-r-cran-rcpparmadillo_15.2.3-1-1_arm64.deb ... 1150s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ... 1150s Selecting previously unselected package r-bioc-deseq2. 1150s Preparing to unpack .../281-r-bioc-deseq2_1.46.0+dfsg-2_arm64.deb ... 1150s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 1150s Selecting previously unselected package r-cran-hwriter. 1150s Preparing to unpack .../282-r-cran-hwriter_1.3.2.1-1_all.deb ... 1150s Unpacking r-cran-hwriter (1.3.2.1-1) ... 1150s Selecting previously unselected package r-cran-bitops. 1150s Preparing to unpack .../283-r-cran-bitops_1.0-9-1_arm64.deb ... 1150s Unpacking r-cran-bitops (1.0-9-1) ... 1150s Selecting previously unselected package r-bioc-rhtslib. 1150s Preparing to unpack .../284-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 1150s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 1150s Selecting previously unselected package r-bioc-rsamtools. 1150s Preparing to unpack .../285-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 1150s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 1150s Selecting previously unselected package r-cran-statmod. 1150s Preparing to unpack .../286-r-cran-statmod_1.5.0-1_arm64.deb ... 1150s Unpacking r-cran-statmod (1.5.0-1) ... 1150s Selecting previously unselected package r-bioc-geneplotter. 1150s Preparing to unpack .../287-r-bioc-geneplotter_1.84.0+dfsg-2_all.deb ... 1150s Unpacking r-bioc-geneplotter (1.84.0+dfsg-2) ... 1150s Selecting previously unselected package r-cran-survival. 1150s Preparing to unpack .../288-r-cran-survival_3.8-6-1_arm64.deb ... 1150s Unpacking r-cran-survival (3.8-6-1) ... 1150s Selecting previously unselected package r-bioc-genefilter. 1150s Preparing to unpack .../289-r-bioc-genefilter_1.88.0-2_arm64.deb ... 1150s Unpacking r-bioc-genefilter (1.88.0-2) ... 1150s Selecting previously unselected package r-bioc-dexseq. 1150s Preparing to unpack .../290-r-bioc-dexseq_1.52.0+dfsg-2_all.deb ... 1150s Unpacking r-bioc-dexseq (1.52.0+dfsg-2) ... 1151s Selecting previously unselected package r-bioc-limma. 1151s Preparing to unpack .../291-r-bioc-limma_3.62.2+dfsg-1_arm64.deb ... 1151s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 1151s Selecting previously unselected package r-bioc-edger. 1151s Preparing to unpack .../292-r-bioc-edger_4.4.2+dfsg-1_arm64.deb ... 1151s Unpacking r-bioc-edger (4.4.2+dfsg-1) ... 1151s Selecting previously unselected package r-bioc-genomicalignments. 1151s Preparing to unpack .../293-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 1151s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 1151s Selecting previously unselected package r-cran-rcurl. 1151s Preparing to unpack .../294-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 1151s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 1151s Selecting previously unselected package r-cran-rjson. 1151s Preparing to unpack .../295-r-cran-rjson_0.2.23-1_arm64.deb ... 1151s Unpacking r-cran-rjson (0.2.23-1) ... 1151s Selecting previously unselected package r-cran-restfulr. 1151s Preparing to unpack .../296-r-cran-restfulr_0.0.15-1_arm64.deb ... 1151s Unpacking r-cran-restfulr (0.0.15-1) ... 1151s Selecting previously unselected package r-bioc-rtracklayer. 1151s Preparing to unpack .../297-r-bioc-rtracklayer_1.66.0-3_arm64.deb ... 1151s Unpacking r-bioc-rtracklayer (1.66.0-3) ... 1151s Selecting previously unselected package r-bioc-genomicfeatures. 1151s Preparing to unpack .../298-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 1151s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 1151s Selecting previously unselected package r-bioc-protgenerics. 1151s Preparing to unpack .../299-r-bioc-protgenerics_1.38.0-2_all.deb ... 1151s Unpacking r-bioc-protgenerics (1.38.0-2) ... 1151s Selecting previously unselected package r-bioc-ensembldb. 1151s Preparing to unpack .../300-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ... 1151s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ... 1151s Selecting previously unselected package r-cran-locfdr. 1151s Preparing to unpack .../301-r-cran-locfdr_1.1-8-2_all.deb ... 1151s Unpacking r-cran-locfdr (1.1-8-2) ... 1151s Selecting previously unselected package r-cran-pbapply. 1151s Preparing to unpack .../302-r-cran-pbapply_1.7-2-1_all.deb ... 1151s Unpacking r-cran-pbapply (1.7-2-1) ... 1151s Selecting previously unselected package r-cran-boot. 1151s Preparing to unpack .../303-r-cran-boot_1.3-32-1_all.deb ... 1151s Unpacking r-cran-boot (1.3-32-1) ... 1151s Selecting previously unselected package r-bioc-saturn. 1151s Preparing to unpack .../304-r-bioc-saturn_1.14.0+dfsg-2_all.deb ... 1151s Unpacking r-bioc-saturn (1.14.0+dfsg-2) ... 1151s Selecting previously unselected package r-cran-brio. 1151s Preparing to unpack .../305-r-cran-brio_1.1.5-1_arm64.deb ... 1151s Unpacking r-cran-brio (1.1.5-1) ... 1151s Selecting previously unselected package r-cran-ps. 1151s Preparing to unpack .../306-r-cran-ps_1.9.0-1_arm64.deb ... 1151s Unpacking r-cran-ps (1.9.0-1) ... 1151s Selecting previously unselected package r-cran-processx. 1152s Preparing to unpack .../307-r-cran-processx_3.8.6-1_arm64.deb ... 1152s Unpacking r-cran-processx (3.8.6-1) ... 1152s Selecting previously unselected package r-cran-callr. 1152s Preparing to unpack .../308-r-cran-callr_3.7.6-1_all.deb ... 1152s Unpacking r-cran-callr (3.7.6-1) ... 1152s Selecting previously unselected package r-cran-rex. 1152s Preparing to unpack .../309-r-cran-rex_1.2.1-1build1_all.deb ... 1152s Unpacking r-cran-rex (1.2.1-1build1) ... 1152s Selecting previously unselected package r-cran-covr. 1152s Preparing to unpack .../310-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 1152s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 1152s Selecting previously unselected package r-cran-desc. 1152s Preparing to unpack .../311-r-cran-desc_1.4.3-1_all.deb ... 1152s Unpacking r-cran-desc (1.4.3-1) ... 1152s Selecting previously unselected package r-cran-diffobj. 1152s Preparing to unpack .../312-r-cran-diffobj_0.3.5-1build1_arm64.deb ... 1152s Unpacking r-cran-diffobj (0.3.5-1build1) ... 1152s Selecting previously unselected package r-cran-pkgbuild. 1152s Preparing to unpack .../313-r-cran-pkgbuild_1.4.8-1_all.deb ... 1152s Unpacking r-cran-pkgbuild (1.4.8-1) ... 1152s Selecting previously unselected package r-cran-rprojroot. 1152s Preparing to unpack .../314-r-cran-rprojroot_2.1.1-1_all.deb ... 1152s Unpacking r-cran-rprojroot (2.1.1-1) ... 1152s Selecting previously unselected package r-cran-pkgload. 1152s Preparing to unpack .../315-r-cran-pkgload_1.4.1-1_all.deb ... 1152s Unpacking r-cran-pkgload (1.4.1-1) ... 1152s Selecting previously unselected package r-cran-praise. 1152s Preparing to unpack .../316-r-cran-praise_1.0.0-4build2_all.deb ... 1152s Unpacking r-cran-praise (1.0.0-4build2) ... 1152s 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(3.62.2+dfsg-1) ... 1158s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 1158s Setting up r-cran-later (1.4.1+dfsg-1) ... 1158s Setting up r-cran-matrix (1.7-4-1) ... 1158s Setting up r-cran-htmltools (0.5.8.1-1) ... 1158s Setting up r-cran-tinytex (0.58-1) ... 1158s Setting up r-cran-knitr (1.51+dfsg-1) ... 1158s Setting up g++ (4:15.2.0-4ubuntu1) ... 1158s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1158s Setting up r-cran-cachem (1.1.0-1) ... 1158s Setting up r-cran-sass (0.4.9+dfsg-1) ... 1158s Setting up build-essential (12.12ubuntu2) ... 1158s Setting up r-cran-rcpparmadillo (15.2.3-1-1) ... 1158s Setting up r-bioc-iranges (2.40.1-3) ... 1158s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 1158s Setting up r-cran-restfulr (0.0.15-1) ... 1158s Setting up r-cran-vctrs (0.6.5-1) ... 1158s Setting up r-cran-pillar (1.11.1+dfsg-1) ... 1158s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 1158s Setting up r-base-dev (4.5.2-1ubuntu2) ... 1158s Setting up 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(3.6.4+dfsg-1) ... 1158s Setting up r-cran-promises (1.3.2+dfsg-1) ... 1158s Setting up r-cran-purrr (1.0.4-1) ... 1158s Setting up r-cran-blob (1.3.0-1) ... 1158s Setting up pkg-r-autopkgtest (20250812) ... 1158s Setting up r-bioc-xvector (0.46.0-2) ... 1158s Setting up r-cran-pkgbuild (1.4.8-1) ... 1158s Setting up r-cran-dplyr (1.1.4-4) ... 1158s Setting up r-cran-rsqlite (2.3.9-1) ... 1158s Setting up r-cran-progress (1.2.3-1) ... 1158s Setting up r-cran-pkgload (1.4.1-1) ... 1158s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 1158s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 1158s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 1158s Setting up r-cran-testthat (3.2.3-1) ... 1158s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 1158s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 1158s Setting up r-cran-tidyr (1.3.1-1) ... 1158s Setting up r-cran-dbplyr (2.5.1+dfsg-1) ... 1158s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 1158s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 1158s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 1158s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 1158s Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ... 1158s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 1158s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 1158s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 1158s Setting up r-cran-bookdown (0.42+dfsg-1) ... 1158s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 1158s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 1158s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... 1158s Setting up r-bioc-annotationdbi (1.68.0-2) ... 1158s Setting up r-bioc-annotationhub (3.14.0+dfsg-2) ... 1158s Setting up r-bioc-annotate (1.84.0+dfsg-2) ... 1158s Setting up r-bioc-biomart (2.62.1+dfsg-1) ... 1158s Setting up r-bioc-saturn (1.14.0+dfsg-2) ... 1158s Setting up r-bioc-genefilter (1.88.0-2) ... 1158s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 1158s Setting up r-bioc-genomicalignments (1.42.0-2) ... 1158s Setting up r-bioc-geneplotter (1.84.0+dfsg-2) ... 1158s Setting up r-bioc-rtracklayer (1.66.0-3) ... 1158s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 1158s Setting up r-bioc-dexseq (1.52.0+dfsg-2) ... 1158s Setting up r-bioc-ensembldb (2.30.0+dfsg-3) ... 1158s Processing triggers for man-db (2.13.1-1build1) ... 1159s Processing triggers for install-info (7.2-5) ... 1159s Processing triggers for libc-bin (2.42-2ubuntu4) ... 1159s Processing triggers for tex-common (6.20) ... 1159s Running updmap-sys. This may take some time... done. 1159s Running mktexlsr /var/lib/texmf ... done. 1159s Building format(s) --all. 1186s This may take some time... done. 1187s autopkgtest [23:42:29]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1187s autopkgtest [23:42:29]: test pkg-r-autopkgtest: [----------------------- 1187s Test: Try to load the R library satuRn 1187s 1187s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 1187s Copyright (C) 2025 The R Foundation for Statistical Computing 1187s Platform: aarch64-unknown-linux-gnu 1187s 1187s R is free software and comes with ABSOLUTELY NO WARRANTY. 1187s You are welcome to redistribute it under certain conditions. 1187s Type 'license()' or 'licence()' for distribution details. 1187s 1187s R is a collaborative project with many contributors. 1187s Type 'contributors()' for more information and 1187s 'citation()' on how to cite R or R packages in publications. 1187s 1187s Type 'demo()' for some demos, 'help()' for on-line help, or 1187s 'help.start()' for an HTML browser interface to help. 1187s Type 'q()' to quit R. 1187s 1187s > library('satuRn') 1194s > 1194s Test: Run tests for satuRn 1194s Start: testthat.R 1194s 1194s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 1194s Copyright (C) 2025 The R Foundation for Statistical Computing 1194s Platform: aarch64-unknown-linux-gnu 1194s 1194s R is free software and comes with ABSOLUTELY NO WARRANTY. 1194s You are welcome to redistribute it under certain conditions. 1194s Type 'license()' or 'licence()' for distribution details. 1194s 1194s R is a collaborative project with many contributors. 1194s Type 'contributors()' for more information and 1194s 'citation()' on how to cite R or R packages in publications. 1194s 1194s Type 'demo()' for some demos, 'help()' for on-line help, or 1194s 'help.start()' for an HTML browser interface to help. 1194s Type 'q()' to quit R. 1194s 1194s > library(testthat) 1194s > library(satuRn) 1201s > library(SummarizedExperiment) 1201s Loading required package: MatrixGenerics 1201s Loading required package: matrixStats 1201s 1201s Attaching package: ‘MatrixGenerics’ 1201s 1201s The following objects are masked from ‘package:matrixStats’: 1201s 1201s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 1201s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 1201s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 1201s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 1201s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 1201s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 1201s colWeightedMeans, colWeightedMedians, colWeightedSds, 1201s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 1201s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 1201s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 1201s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 1201s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 1201s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 1201s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 1201s rowWeightedSds, rowWeightedVars 1201s 1201s Loading required package: GenomicRanges 1201s Loading required package: stats4 1201s Loading required package: BiocGenerics 1201s 1201s Attaching package: ‘BiocGenerics’ 1201s 1201s The following objects are masked from ‘package:stats’: 1201s 1201s IQR, mad, sd, var, xtabs 1201s 1201s The following objects are masked from ‘package:base’: 1201s 1201s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 1201s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 1201s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 1201s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 1201s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 1201s table, tapply, union, unique, unsplit, which.max, which.min 1201s 1201s Loading required package: S4Vectors 1201s 1201s Attaching package: ‘S4Vectors’ 1201s 1201s The following object is masked from ‘package:utils’: 1201s 1201s findMatches 1201s 1201s The following objects are masked from ‘package:base’: 1201s 1201s expand.grid, I, unname 1201s 1201s Loading required package: IRanges 1201s Loading required package: GenomeInfoDb 1201s Loading required package: Biobase 1201s Welcome to Bioconductor 1201s 1201s Vignettes contain introductory material; view with 1201s 'browseVignettes()'. To cite Bioconductor, see 1201s 'citation("Biobase")', and for packages 'citation("pkgname")'. 1201s 1201s 1201s Attaching package: ‘Biobase’ 1201s 1201s The following object is masked from ‘package:MatrixGenerics’: 1201s 1201s rowMedians 1201s 1201s The following objects are masked from ‘package:matrixStats’: 1201s 1201s anyMissing, rowMedians 1201s 1201s > library(DelayedArray) 1201s Loading required package: Matrix 1201s 1201s Attaching package: ‘Matrix’ 1201s 1201s The following object is masked from ‘package:S4Vectors’: 1201s 1201s expand 1201s 1201s Loading required package: S4Arrays 1201s Loading required package: abind 1201s 1201s Attaching package: ‘S4Arrays’ 1201s 1201s The following object is masked from ‘package:abind’: 1201s 1201s abind 1201s 1201s The following object is masked from ‘package:base’: 1201s 1201s rowsum 1201s 1201s Loading required package: SparseArray 1201s 1201s Attaching package: ‘DelayedArray’ 1201s 1201s > 1201s > test_check("satuRn") 1201s The following objects are masked from ‘package:base’: 1201s 1201s apply, scale, sweep 1201s 1217s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 12 ] 1217s > 1217s autopkgtest [23:42:59]: test pkg-r-autopkgtest: -----------------------] 1217s pkg-r-autopkgtest PASS 1217s autopkgtest [23:42:59]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1218s autopkgtest [23:43:00]: @@@@@@@@@@@@@@@@@@@@ summary 1218s pkg-r-autopkgtest PASS