0s autopkgtest [23:18:18]: starting date and time: 2026-02-09 23:18:18+0000 5s autopkgtest [23:18:23]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 5s autopkgtest [23:18:23]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.p4k1_r0e/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-isoformswitchanalyzer --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-arm64-14.secgroup --name adt-resolute-arm64-r-bioc-isoformswitchanalyzer-20260209-231815-juju-7f2275-prod-proposed-migration-environment-20-d1b60eb2-6700-45fc-89d3-ef8899a24402 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 9s Creating nova instance adt-resolute-arm64-r-bioc-isoformswitchanalyzer-20260209-231815-juju-7f2275-prod-proposed-migration-environment-20-d1b60eb2-6700-45fc-89d3-ef8899a24402 from image adt/ubuntu-resolute-arm64-server-20260209.img (UUID 793037ca-75af-461b-82de-f8081300b2e3)... 130s autopkgtest [23:20:28]: testbed dpkg architecture: arm64 130s autopkgtest [23:20:28]: testbed apt version: 3.1.15 131s autopkgtest [23:20:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup 131s autopkgtest [23:20:29]: testbed release detected to be: None 131s autopkgtest [23:20:29]: updating testbed package index (apt update) 132s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 132s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 132s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 132s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 132s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 136s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 136s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 136s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [246 kB] 136s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [6216 B] 136s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [304 B] 136s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [1580 kB] 139s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [32.0 kB] 139s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [21.7 kB] 139s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [688 B] 140s Fetched 3862 kB in 7s (550 kB/s) 141s Reading package lists... 142s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 142s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 142s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 142s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 143s Reading package lists... 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 144s Calculating upgrade... 144s The following packages will be upgraded: 144s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 144s libip6tc2 libxtables12 wget 144s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Need to get 2534 kB of archives. 144s After this operation, 18.4 kB of additional disk space will be used. 144s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 iptables arm64 1.8.11-2ubuntu3 [386 kB] 144s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libip4tc2 arm64 1.8.11-2ubuntu3 [24.3 kB] 144s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libip6tc2 arm64 1.8.11-2ubuntu3 [24.7 kB] 144s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libxtables12 arm64 1.8.11-2ubuntu3 [36.7 kB] 144s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 iproute2 arm64 6.18.0-1ubuntu1 [1171 kB] 147s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libcryptsetup12 arm64 2:2.8.0-1ubuntu3 [274 kB] 147s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 wget arm64 1.25.0-2ubuntu4 [344 kB] 147s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cryptsetup-bin arm64 2:2.8.0-1ubuntu3 [227 kB] 147s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 dracut-install arm64 109-11ubuntu1 [45.3 kB] 147s dpkg-preconfigure: unable to re-open stdin: No such file or directory 147s Fetched 2534 kB in 3s (793 kB/s) 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136597 files and directories currently installed.) 148s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_arm64.deb ... 148s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 148s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_arm64.deb ... 148s Unpacking libip4tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 148s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_arm64.deb ... 148s Unpacking libip6tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 148s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_arm64.deb ... 148s Unpacking libxtables12:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 148s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_arm64.deb ... 148s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 148s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_arm64.deb ... 148s Unpacking libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 148s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_arm64.deb ... 148s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 148s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_arm64.deb ... 148s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 149s Preparing to unpack .../8-dracut-install_109-11ubuntu1_arm64.deb ... 149s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 149s Setting up libip4tc2:arm64 (1.8.11-2ubuntu3) ... 149s Setting up wget (1.25.0-2ubuntu4) ... 149s Setting up libip6tc2:arm64 (1.8.11-2ubuntu3) ... 149s Setting up libxtables12:arm64 (1.8.11-2ubuntu3) ... 149s Setting up dracut-install (109-11ubuntu1) ... 149s Setting up libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) ... 149s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 149s Setting up iptables (1.8.11-2ubuntu3) ... 149s Setting up iproute2 (6.18.0-1ubuntu1) ... 149s Processing triggers for man-db (2.13.1-1build1) ... 150s Processing triggers for install-info (7.2-5) ... 150s Processing triggers for libc-bin (2.42-2ubuntu4) ... 150s autopkgtest [23:20:48]: upgrading testbed (apt dist-upgrade and autopurge) 150s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Calculating upgrade... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 152s Solving dependencies... 152s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 154s autopkgtest [23:20:52]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 19:46:27 UTC 2026 155s autopkgtest [23:20:53]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-isoformswitchanalyzer 161s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-isoformswitchanalyzer 2.6.0+ds-2 (dsc) [2902 B] 161s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-isoformswitchanalyzer 2.6.0+ds-2 (tar) [3122 kB] 161s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-isoformswitchanalyzer 2.6.0+ds-2 (diff) [3332 B] 161s gpgv: Signature made Tue Jan 14 10:33:41 2025 UTC 161s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 161s gpgv: issuer "crusoe@debian.org" 161s gpgv: Can't check signature: No public key 161s dpkg-source: warning: cannot verify inline signature for ./r-bioc-isoformswitchanalyzer_2.6.0+ds-2.dsc: no acceptable signature found 161s autopkgtest [23:20:59]: testing package r-bioc-isoformswitchanalyzer version 2.6.0+ds-2 161s autopkgtest [23:20:59]: build not needed 164s autopkgtest [23:21:02]: test pkg-r-autopkgtest: preparing testbed 164s Reading package lists... 164s Building dependency tree... 164s Reading state information... 164s Solving dependencies... 165s The following NEW packages will be installed: 165s build-essential cpp cpp-15 cpp-15-aarch64-linux-gnu cpp-aarch64-linux-gnu 165s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 165s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15 165s g++-15-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-15 165s gcc-15-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-15 165s gfortran-15-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 165s javascript-common libasan8 libblas-dev libblas3 libboost-dev 165s libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 165s libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 165s libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 libgraphite2-3 165s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 165s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 165s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 165s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 165s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 165s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 165s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4 165s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 165s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 165s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 165s libpng-dev libreadline-dev libsharpyuv0 libsm6 libstdc++-15-dev libtcl8.6 165s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 165s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 165s libzstd-dev linux-libc-dev node-bootstrap-sass node-html5shiv 165s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 165s r-base-core r-base-dev r-bioc-annotate r-bioc-annotationdbi 165s r-bioc-annotationfilter r-bioc-annotationhub r-bioc-biobase 165s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 165s r-bioc-biocversion r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome 165s r-bioc-delayedarray r-bioc-deseq2 r-bioc-dexseq r-bioc-edger 165s r-bioc-ensembldb r-bioc-genefilter r-bioc-geneplotter r-bioc-genomeinfodb 165s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 165s r-bioc-genomicranges r-bioc-iranges r-bioc-isoformswitchanalyzer 165s r-bioc-keggrest r-bioc-limma r-bioc-matrixgenerics r-bioc-pfamanalyzer 165s r-bioc-protgenerics r-bioc-pwalign r-bioc-rhtslib r-bioc-rsamtools 165s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-saturn 165s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-sva r-bioc-txdbmaker 165s r-bioc-tximeta r-bioc-tximport r-bioc-ucsc.utils r-bioc-xvector 165s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 165s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 165s r-cran-boot r-cran-bslib r-cran-cachem r-cran-cli r-cran-clipr 165s r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 165s r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-evaluate 165s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 165s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 165s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable 165s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 165s r-cran-httr2 r-cran-hwriter r-cran-isoband r-cran-jquerylib r-cran-jsonlite 165s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 165s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-locfdr r-cran-locfit 165s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv 165s r-cran-mime r-cran-nlme r-cran-openssl r-cran-pbapply r-cran-pillar 165s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-plyr r-cran-png 165s r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 165s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo 165s r-cran-rcurl r-cran-readr r-cran-reshape2 r-cran-restfulr r-cran-rjson 165s r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-s7 r-cran-sass 165s r-cran-scales r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-statmod 165s r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys r-cran-tibble 165s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 165s r-cran-vctrs r-cran-venndiagram r-cran-viridislite r-cran-vroom r-cran-withr 165s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 165s unzip x11-common xdg-utils zip zlib1g-dev 165s 0 upgraded, 298 newly installed, 0 to remove and 0 not upgraded. 165s Need to get 367 MB of archives. 165s After this operation, 1192 MB of additional disk space will be used. 165s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libc-dev-bin arm64 2.42-2ubuntu4 [22.5 kB] 165s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 linux-libc-dev arm64 6.19.0-3.3 [1819 kB] 169s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libcrypt-dev arm64 1:4.5.1-1 [123 kB] 169s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 rpcsvc-proto arm64 1.4.3-1build1 [65.6 kB] 169s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 libc6-dev arm64 2.42-2ubuntu4 [1765 kB] 173s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1build1 [676 kB] 175s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-2 [55.6 kB] 175s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [11.7 MB] 203s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-12ubuntu1 [1030 B] 203s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 203s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 203s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-12ubuntu1 [49.0 kB] 203s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 203s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-12ubuntu1 [27.8 kB] 203s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-12ubuntu1 [2920 kB] 212s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-12ubuntu1 [1316 kB] 215s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-12ubuntu1 [2688 kB] 219s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-12ubuntu1 [1175 kB] 221s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-12ubuntu1 [1638 kB] 225s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-12ubuntu1 [2600 kB] 231s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [23.1 MB] 275s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-12ubuntu1 [519 kB] 275s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 275s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 275s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-12ubuntu1 [2549 kB] 280s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [13.2 MB] 302s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-12ubuntu1 [25.3 kB] 302s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 302s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 302s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu2 [5254 B] 302s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 dctrl-tools arm64 2.24-3build4 [102 kB] 302s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 302s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 304s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 304s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 304s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 304s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 306s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 306s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 313s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 313s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran-15-dev arm64 15.2.0-12ubuntu1 [490 kB] 313s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [12.5 MB] 343s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15 arm64 15.2.0-12ubuntu1 [18.1 kB] 343s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1022 B] 343s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran arm64 4:15.2.0-4ubuntu1 [1160 B] 343s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 icu-devtools arm64 78.2-1ubuntu1 [207 kB] 343s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1build1 [4864 B] 343s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 343s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas-dev arm64 3.12.1-7ubuntu1 [160 kB] 343s Get:50 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost1.90-dev arm64 1.90.0-2ubuntu1 [11.5 MB] 371s Get:51 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost-dev arm64 1.90.0.0ubuntu3 [4764 B] 371s Get:52 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-dev arm64 1.0.8-6build2 [34.9 kB] 371s Get:53 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 371s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 371s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 371s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 371s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 372s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 372s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2build1 [46.8 kB] 372s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate-dev arm64 1.23-2build1 [54.3 kB] 372s Get:61 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 372s Get:62 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.2-1 [510 kB] 372s Get:63 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 372s Get:64 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 372s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 libicu-dev arm64 78.2-1ubuntu1 [12.5 MB] 392s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu3 [161 kB] 392s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu3 [301 kB] 392s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 392s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 392s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 392s Get:71 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 392s Get:72 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 392s Get:73 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 393s Get:74 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 393s Get:75 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 393s Get:76 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 393s Get:77 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 393s Get:78 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 393s Get:79 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 393s Get:80 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 393s Get:81 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 393s Get:82 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 393s Get:83 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 393s Get:84 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 393s Get:85 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 398s Get:86 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack-dev arm64 3.12.1-7ubuntu1 [4456 kB] 406s Get:87 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 406s Get:88 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 406s Get:89 http://ftpmaster.internal/ubuntu resolute/main arm64 libncurses-dev arm64 6.6+20251231-1 [391 kB] 406s Get:90 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 406s Get:91 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 406s Get:92 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 406s Get:93 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 406s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 406s Get:95 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 406s Get:96 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 406s Get:97 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-16-0 arm64 10.46-1 [225 kB] 406s Get:98 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-32-0 arm64 10.46-1 [213 kB] 406s Get:99 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-posix3 arm64 10.46-1 [7300 B] 406s Get:100 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-dev arm64 10.46-1 [772 kB] 407s Get:101 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 407s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 409s Get:103 http://ftpmaster.internal/ubuntu resolute/main arm64 libpng-dev arm64 1.6.54-1 [268 kB] 409s Get:104 http://ftpmaster.internal/ubuntu resolute/main arm64 libreadline-dev arm64 8.3-3 [199 kB] 409s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 409s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1build1 [16.8 kB] 409s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1build1 [983 kB] 411s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 411s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 411s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 411s Get:111 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 411s Get:112 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 411s Get:113 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 413s Get:114 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 413s Get:115 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-3 [349 kB] 413s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 413s Get:117 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 413s Get:118 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 413s Get:119 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 413s Get:120 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 510s Get:121 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu3 [170 kB] 510s Get:122 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 510s Get:123 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 510s Get:124 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 566s Get:125 http://ftpmaster.internal/ubuntu resolute/main arm64 liblzma-dev arm64 5.8.2-2 [180 kB] 566s Get:126 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 566s Get:127 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 566s Get:128 http://ftpmaster.internal/ubuntu resolute/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 566s Get:129 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 566s Get:130 http://ftpmaster.internal/ubuntu resolute/universe arm64 pkg-r-autopkgtest all 20250812 [6158 B] 566s Get:131 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 567s Get:132 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 571s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 575s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 579s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1build1 [855 kB] 581s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 581s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit64 arm64 4.6.0-1-4 [495 kB] 581s Get:138 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 584s Get:139 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 586s Get:140 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 586s Get:141 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 586s Get:142 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 589s Get:143 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-blob all 1.3.0-1 [54.1 kB] 589s Get:144 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 589s Get:145 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 589s Get:146 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 589s Get:147 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 589s Get:148 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plogr all 0.2.0-3build2 [15.8 kB] 589s Get:149 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 589s Get:150 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rsqlite arm64 2.3.9-1 [1247 kB] 591s Get:151 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 591s Get:152 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 591s Get:153 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 591s Get:154 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 591s Get:155 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 591s Get:156 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 591s Get:157 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 591s Get:158 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 591s Get:159 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 591s Get:160 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 591s Get:161 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 592s Get:162 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 592s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 615s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 625s Get:165 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 625s Get:166 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 647s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 647s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 657s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xml arm64 3.99-0.20-1 [1749 kB] 659s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 661s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotate all 1.84.0+dfsg-2 [1870 kB] 666s Get:172 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 670s Get:173 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 670s Get:174 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB] 671s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 671s Get:176 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 671s Get:177 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 671s Get:178 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 671s Get:179 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 672s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 672s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 672s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 672s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 675s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 676s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 678s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 678s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 680s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbplyr all 2.5.1+dfsg-1 [1237 kB] 682s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 682s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 682s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 682s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 682s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 682s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 682s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB] 682s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 682s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 682s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lambda.r all 1.2.4-2build2 [118 kB] 682s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB] 682s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB] 682s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB] 682s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 682s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 682s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 684s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hms all 1.1.4-1 [102 kB] 684s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 684s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 685s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr2 all 1.1.1-2 [752 kB] 686s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 686s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xml2 arm64 1.4.1-1 [326 kB] 686s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 686s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 686s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 689s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 695s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 695s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 695s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 698s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 707s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 715s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 717s Get:221 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-2 [1369 kB] 719s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 723s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 725s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 729s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 730s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 730s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 730s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rtracklayer arm64 1.66.0-3 [5216 kB] 739s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-bsgenome all 1.74.0-2 [7001 kB] 759s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-locfit arm64 1.5-9.12-1 [514 kB] 759s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 759s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 762s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s7 arm64 0.2.0-1 [329 kB] 762s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 764s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 764s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 764s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.3-1 [1088 kB] 766s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 768s Get:239 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 777s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.22-1 [85.1 kB] 777s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 777s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 781s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpparmadillo arm64 15.2.3-1-1 [916 kB] 783s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-deseq2 arm64 1.46.0+dfsg-2 [1237 kB] 786s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hwriter all 1.3.2.1-1 [106 kB] 786s Get:246 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 786s Get:247 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-geneplotter all 1.84.0+dfsg-2 [1508 kB] 789s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-6-1 [8270 kB] 807s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genefilter arm64 1.88.0-2 [1241 kB] 809s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-dexseq all 1.52.0+dfsg-2 [453 kB] 809s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-limma arm64 3.62.2+dfsg-1 [1968 kB] 813s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-edger arm64 4.4.2+dfsg-1 [1114 kB] 815s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 817s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-protgenerics all 1.38.0-2 [239 kB] 817s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB] 820s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-locfdr all 1.1-8-2 [306 kB] 820s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pbapply all 1.7-2-1 [102 kB] 820s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-boot all 1.3-32-1 [636 kB] 821s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-saturn all 1.14.0+dfsg-2 [2955 kB] 827s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nlme arm64 3.1.168-1 [2310 kB] 831s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mgcv arm64 1.9-4-1 [3546 kB] 838s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-sva arm64 3.54.0-2 [466 kB] 838s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-clipr all 0.8.0-1build1 [54.0 kB] 838s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tzdb arm64 0.5.0-1 [530 kB] 839s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vroom arm64 1.7.0-1 [887 kB] 841s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-readr arm64 2.1.6-1 [800 kB] 842s Get:267 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-pfamanalyzer all 1.6.0+dfsg-2 [33.0 kB] 842s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 844s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-reshape2 arm64 1.4.4-2build2 [118 kB] 844s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gridextra all 2.3-3build2 [1032 kB] 846s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-venndiagram all 1.7.3-1 [266 kB] 846s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-tximport all 1.34.0+dfsg-2 [90.4 kB] 846s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-txdbmaker all 1.2.1+ds-2 [875 kB] 847s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-tximeta all 1.24.0+dfsg-2 [436 kB] 847s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-pwalign arm64 1.2.0-3 [753 kB] 849s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-isoformswitchanalyzer arm64 2.6.0+ds-2 [4115 kB] 856s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 856s Get:278 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 856s Get:279 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 856s Get:280 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 856s Get:281 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 858s Get:282 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 868s Get:283 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 868s Get:284 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.5-1 [117 kB] 869s Get:285 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 871s Get:286 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 872s Get:287 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 872s Get:288 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 872s Get:289 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 872s Get:290 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 872s Get:291 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 884s Get:292 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 885s Get:293 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 885s Get:294 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 885s Get:295 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 885s Get:296 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 885s Get:297 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 891s Get:298 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 895s Preconfiguring packages ... 895s Fetched 367 MB in 12min 9s (503 kB/s) 895s Selecting previously unselected package libc-dev-bin. 895s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136600 files and directories currently installed.) 895s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_arm64.deb ... 895s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 895s Selecting previously unselected package linux-libc-dev:arm64. 895s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_arm64.deb ... 895s Unpacking linux-libc-dev:arm64 (6.19.0-3.3) ... 895s Selecting previously unselected package libcrypt-dev:arm64. 895s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_arm64.deb ... 895s Unpacking libcrypt-dev:arm64 (1:4.5.1-1) ... 895s Selecting previously unselected package rpcsvc-proto. 895s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_arm64.deb ... 895s Unpacking rpcsvc-proto (1.4.3-1build1) ... 895s Selecting previously unselected package libc6-dev:arm64. 895s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_arm64.deb ... 895s Unpacking libc6-dev:arm64 (2.42-2ubuntu4) ... 895s Selecting previously unselected package libisl23:arm64. 895s Preparing to unpack .../005-libisl23_0.27-1build1_arm64.deb ... 895s Unpacking libisl23:arm64 (0.27-1build1) ... 895s Selecting previously unselected package libmpc3:arm64. 895s Preparing to unpack .../006-libmpc3_1.3.1-2_arm64.deb ... 895s Unpacking libmpc3:arm64 (1.3.1-2) ... 895s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 895s Preparing to unpack .../007-cpp-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 895s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 896s Selecting previously unselected package cpp-15. 896s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_arm64.deb ... 896s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 896s Selecting previously unselected package cpp-aarch64-linux-gnu. 896s Preparing to unpack .../009-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 896s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 896s Selecting previously unselected package cpp. 896s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 896s Unpacking cpp (4:15.2.0-4ubuntu1) ... 896s Selecting previously unselected package libcc1-0:arm64. 896s Preparing to unpack .../011-libcc1-0_15.2.0-12ubuntu1_arm64.deb ... 896s Unpacking libcc1-0:arm64 (15.2.0-12ubuntu1) ... 896s Selecting previously unselected package libgomp1:arm64. 896s Preparing to unpack .../012-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 896s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 896s Selecting previously unselected package libitm1:arm64. 896s Preparing to unpack .../013-libitm1_15.2.0-12ubuntu1_arm64.deb ... 896s Unpacking libitm1:arm64 (15.2.0-12ubuntu1) ... 896s Selecting previously unselected package libasan8:arm64. 896s Preparing to unpack .../014-libasan8_15.2.0-12ubuntu1_arm64.deb ... 896s Unpacking libasan8:arm64 (15.2.0-12ubuntu1) ... 896s Selecting previously unselected package liblsan0:arm64. 896s Preparing to unpack .../015-liblsan0_15.2.0-12ubuntu1_arm64.deb ... 896s Unpacking liblsan0:arm64 (15.2.0-12ubuntu1) ... 896s Selecting previously unselected package libtsan2:arm64. 896s Preparing to unpack .../016-libtsan2_15.2.0-12ubuntu1_arm64.deb ... 896s Unpacking libtsan2:arm64 (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package libubsan1:arm64. 897s Preparing to unpack .../017-libubsan1_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking libubsan1:arm64 (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package libhwasan0:arm64. 897s Preparing to unpack .../018-libhwasan0_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking libhwasan0:arm64 (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package libgcc-15-dev:arm64. 897s Preparing to unpack .../019-libgcc-15-dev_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 897s Preparing to unpack .../020-gcc-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package gcc-15. 897s Preparing to unpack .../021-gcc-15_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package gcc-aarch64-linux-gnu. 897s Preparing to unpack .../022-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 897s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 897s Selecting previously unselected package gcc. 897s Preparing to unpack .../023-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 897s Unpacking gcc (4:15.2.0-4ubuntu1) ... 897s Selecting previously unselected package libstdc++-15-dev:arm64. 897s Preparing to unpack .../024-libstdc++-15-dev_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package g++-15-aarch64-linux-gnu. 897s Preparing to unpack .../025-g++-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package g++-15. 897s Preparing to unpack .../026-g++-15_15.2.0-12ubuntu1_arm64.deb ... 897s Unpacking g++-15 (15.2.0-12ubuntu1) ... 897s Selecting previously unselected package g++-aarch64-linux-gnu. 897s Preparing to unpack .../027-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 897s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 897s Selecting previously unselected package g++. 897s Preparing to unpack .../028-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 897s Unpacking g++ (4:15.2.0-4ubuntu1) ... 897s Selecting previously unselected package build-essential. 897s Preparing to unpack .../029-build-essential_12.12ubuntu2_arm64.deb ... 897s Unpacking build-essential (12.12ubuntu2) ... 897s Selecting previously unselected package dctrl-tools. 897s Preparing to unpack .../030-dctrl-tools_2.24-3build4_arm64.deb ... 897s Unpacking dctrl-tools (2.24-3build4) ... 897s Selecting previously unselected package fonts-dejavu-mono. 897s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8build1_all.deb ... 897s Unpacking fonts-dejavu-mono (2.37-8build1) ... 897s Selecting previously unselected package fonts-dejavu-core. 897s Preparing to unpack .../032-fonts-dejavu-core_2.37-8build1_all.deb ... 898s Unpacking fonts-dejavu-core (2.37-8build1) ... 898s Selecting previously unselected package fontconfig-config. 898s Preparing to unpack .../033-fontconfig-config_2.17.1-3ubuntu1_arm64.deb ... 898s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 898s Selecting previously unselected package libfontconfig1:arm64. 898s Preparing to unpack .../034-libfontconfig1_2.17.1-3ubuntu1_arm64.deb ... 898s Unpacking libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 898s Selecting previously unselected package fontconfig. 898s Preparing to unpack .../035-fontconfig_2.17.1-3ubuntu1_arm64.deb ... 898s Unpacking fontconfig (2.17.1-3ubuntu1) ... 898s Selecting previously unselected package fonts-font-awesome. 898s Preparing to unpack .../036-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 898s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 898s Selecting previously unselected package fonts-glyphicons-halflings. 898s Preparing to unpack .../037-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 898s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 898s Selecting previously unselected package fonts-mathjax. 898s Preparing to unpack .../038-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 898s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 898s Selecting previously unselected package libgfortran5:arm64. 898s Preparing to unpack .../039-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 898s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 898s Selecting previously unselected package libgfortran-15-dev:arm64. 898s Preparing to unpack .../040-libgfortran-15-dev_15.2.0-12ubuntu1_arm64.deb ... 898s Unpacking libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 898s Selecting previously unselected package gfortran-15-aarch64-linux-gnu. 898s Preparing to unpack .../041-gfortran-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 898s Unpacking gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 898s Selecting previously unselected package gfortran-15. 898s Preparing to unpack .../042-gfortran-15_15.2.0-12ubuntu1_arm64.deb ... 898s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 898s Selecting previously unselected package gfortran-aarch64-linux-gnu. 898s Preparing to unpack .../043-gfortran-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 898s Unpacking gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 899s Selecting previously unselected package gfortran. 899s Preparing to unpack .../044-gfortran_4%3a15.2.0-4ubuntu1_arm64.deb ... 899s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 899s Selecting previously unselected package icu-devtools. 899s Preparing to unpack .../045-icu-devtools_78.2-1ubuntu1_arm64.deb ... 899s Unpacking icu-devtools (78.2-1ubuntu1) ... 899s Selecting previously unselected package javascript-common. 899s Preparing to unpack .../046-javascript-common_12+nmu1build1_all.deb ... 899s Unpacking javascript-common (12+nmu1build1) ... 899s Selecting previously unselected package libblas3:arm64. 899s Preparing to unpack .../047-libblas3_3.12.1-7ubuntu1_arm64.deb ... 899s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 899s Selecting previously unselected package libblas-dev:arm64. 899s 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libsm6:arm64. 903s Preparing to unpack .../105-libsm6_2%3a1.2.6-1build1_arm64.deb ... 903s Unpacking libsm6:arm64 (2:1.2.6-1build1) ... 903s Selecting previously unselected package libtcl8.6:arm64. 903s Preparing to unpack .../106-libtcl8.6_8.6.17+dfsg-1build1_arm64.deb ... 903s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1build1) ... 903s Selecting previously unselected package libjbig0:arm64. 903s Preparing to unpack .../107-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 903s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 903s Selecting previously unselected package libwebp7:arm64. 903s Preparing to unpack .../108-libwebp7_1.5.0-0.1build1_arm64.deb ... 903s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 903s Selecting previously unselected package libtiff6:arm64. 903s Preparing to unpack .../109-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 903s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 904s Selecting previously unselected package libxft2:arm64. 904s Preparing to unpack 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r-bioc-s4vectors (0.44.0+dfsg-2) ... 906s Selecting previously unselected package r-bioc-iranges. 906s Preparing to unpack .../133-r-bioc-iranges_2.40.1-3_arm64.deb ... 906s Unpacking r-bioc-iranges (2.40.1-3) ... 906s Selecting previously unselected package r-cran-dbi. 906s Preparing to unpack .../134-r-cran-dbi_1.2.3-1build1_all.deb ... 906s Unpacking r-cran-dbi (1.2.3-1build1) ... 906s Selecting previously unselected package r-cran-bit. 906s Preparing to unpack .../135-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 906s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 906s Selecting previously unselected package r-cran-bit64. 906s Preparing to unpack .../136-r-cran-bit64_4.6.0-1-4_arm64.deb ... 906s Unpacking r-cran-bit64 (4.6.0-1-4) ... 906s Selecting previously unselected package r-cran-rlang. 906s Preparing to unpack .../137-r-cran-rlang_1.1.5-3_arm64.deb ... 906s Unpacking r-cran-rlang (1.1.5-3) ... 906s Selecting previously unselected package r-cran-cli. 906s Preparing to unpack .../138-r-cran-cli_3.6.4-1_arm64.deb ... 906s Unpacking r-cran-cli (3.6.4-1) ... 906s Selecting previously unselected package r-cran-glue. 906s Preparing to unpack .../139-r-cran-glue_1.8.0-1_arm64.deb ... 906s Unpacking r-cran-glue (1.8.0-1) ... 906s Selecting previously unselected package r-cran-lifecycle. 906s Preparing to unpack .../140-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 906s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 906s Selecting previously unselected package r-cran-vctrs. 906s Preparing to unpack .../141-r-cran-vctrs_0.6.5-1_arm64.deb ... 906s Unpacking r-cran-vctrs (0.6.5-1) ... 906s Selecting previously unselected package r-cran-blob. 906s Preparing to unpack .../142-r-cran-blob_1.3.0-1_all.deb ... 906s Unpacking r-cran-blob (1.3.0-1) ... 906s Selecting previously unselected package r-cran-fastmap. 906s Preparing to unpack .../143-r-cran-fastmap_1.2.0-1_arm64.deb ... 906s Unpacking r-cran-fastmap (1.2.0-1) ... 906s Selecting previously unselected package r-cran-cachem. 906s Preparing to unpack .../144-r-cran-cachem_1.1.0-1_arm64.deb ... 906s Unpacking r-cran-cachem (1.1.0-1) ... 907s Selecting previously unselected package r-cran-memoise. 907s Preparing to unpack .../145-r-cran-memoise_2.0.1-1build1_all.deb ... 907s Unpacking r-cran-memoise (2.0.1-1build1) ... 907s Selecting previously unselected package r-cran-pkgconfig. 907s Preparing to unpack .../146-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 907s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 907s Selecting previously unselected package r-cran-plogr. 907s Preparing to unpack .../147-r-cran-plogr_0.2.0-3build2_all.deb ... 907s Unpacking r-cran-plogr (0.2.0-3build2) ... 907s Selecting previously unselected package r-cran-cpp11. 907s Preparing to unpack .../148-r-cran-cpp11_0.5.3-1_all.deb ... 907s Unpacking r-cran-cpp11 (0.5.3-1) ... 907s Selecting previously unselected package r-cran-rsqlite. 907s Preparing to unpack .../149-r-cran-rsqlite_2.3.9-1_arm64.deb ... 907s Unpacking r-cran-rsqlite (2.3.9-1) ... 907s Selecting previously unselected package r-cran-curl. 907s Preparing to unpack .../150-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 907s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 907s Selecting previously unselected package r-cran-jsonlite. 907s Preparing to unpack .../151-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 907s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 907s Selecting previously unselected package r-cran-mime. 907s Preparing to unpack .../152-r-cran-mime_0.12-2_arm64.deb ... 907s Unpacking r-cran-mime (0.12-2) ... 907s Selecting previously unselected package r-cran-sys. 907s Preparing to unpack .../153-r-cran-sys_3.4.3-1_arm64.deb ... 907s Unpacking r-cran-sys (3.4.3-1) ... 907s Selecting previously unselected package r-cran-askpass. 907s Preparing to unpack .../154-r-cran-askpass_1.2.1-1_arm64.deb ... 907s Unpacking r-cran-askpass (1.2.1-1) ... 907s Selecting previously unselected package r-cran-openssl. 907s Preparing to unpack .../155-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 907s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 907s Selecting previously unselected package r-cran-r6. 907s Preparing to unpack .../156-r-cran-r6_2.6.1-1_all.deb ... 907s Unpacking r-cran-r6 (2.6.1-1) ... 907s Selecting previously unselected package r-cran-httr. 907s Preparing to unpack .../157-r-cran-httr_1.4.7+dfsg-1_all.deb ... 907s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 907s Selecting previously unselected package r-cran-png. 907s Preparing to unpack .../158-r-cran-png_0.1-8-1build2_arm64.deb ... 907s Unpacking r-cran-png (0.1-8-1build2) ... 907s Selecting previously unselected package r-bioc-zlibbioc. 907s Preparing to unpack .../159-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 907s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 907s Selecting previously unselected package r-bioc-xvector. 907s Preparing to unpack .../160-r-bioc-xvector_0.46.0-2_arm64.deb ... 907s Unpacking r-bioc-xvector (0.46.0-2) ... 907s Selecting previously unselected package r-bioc-ucsc.utils. 907s Preparing to unpack .../161-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 907s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 907s Selecting previously unselected package r-bioc-genomeinfodbdata. 907s Preparing to unpack .../162-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 907s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 907s Selecting previously unselected package r-bioc-genomeinfodb. 907s Preparing to unpack .../163-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 907s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 908s Selecting previously unselected package r-cran-crayon. 908s Preparing to unpack .../164-r-cran-crayon_1.5.3-1_all.deb ... 908s Unpacking r-cran-crayon (1.5.3-1) ... 908s Selecting previously unselected package r-bioc-biostrings. 908s Preparing to unpack .../165-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 908s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 908s Selecting previously unselected package r-bioc-keggrest. 908s Preparing to unpack .../166-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 908s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 908s Selecting previously unselected package r-bioc-annotationdbi. 908s Preparing to unpack .../167-r-bioc-annotationdbi_1.68.0-2_all.deb ... 908s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 908s Selecting previously unselected package r-cran-xml. 908s Preparing to unpack .../168-r-cran-xml_3.99-0.20-1_arm64.deb ... 908s Unpacking r-cran-xml (3.99-0.20-1) ... 908s Selecting previously unselected package r-cran-xtable. 908s Preparing to unpack .../169-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 908s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 908s Selecting previously unselected package r-bioc-annotate. 908s Preparing to unpack .../170-r-bioc-annotate_1.84.0+dfsg-2_all.deb ... 908s Unpacking r-bioc-annotate (1.84.0+dfsg-2) ... 908s Selecting previously unselected package r-bioc-genomicranges. 908s Preparing to unpack .../171-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 908s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 908s Selecting previously unselected package r-cran-lazyeval. 908s Preparing to unpack .../172-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 908s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 908s Selecting previously unselected package r-bioc-annotationfilter. 908s Preparing to unpack .../173-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ... 908s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ... 908s Selecting previously unselected package r-cran-generics. 908s Preparing to unpack .../174-r-cran-generics_0.1.4-1_all.deb ... 908s Unpacking r-cran-generics (0.1.4-1) ... 908s Selecting previously unselected package r-cran-magrittr. 908s Preparing to unpack .../175-r-cran-magrittr_2.0.3-1_arm64.deb ... 908s Unpacking r-cran-magrittr (2.0.3-1) ... 908s Selecting previously unselected package r-cran-utf8. 908s Preparing to unpack .../176-r-cran-utf8_1.2.4-1_arm64.deb ... 908s Unpacking r-cran-utf8 (1.2.4-1) ... 908s Selecting previously unselected package r-cran-pillar. 908s Preparing to unpack .../177-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 908s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 908s Selecting previously unselected package r-cran-fansi. 908s Preparing to unpack .../178-r-cran-fansi_1.0.6-2_arm64.deb ... 908s Unpacking r-cran-fansi (1.0.6-2) ... 908s Selecting previously unselected package r-cran-tibble. 908s Preparing to unpack .../179-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 908s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 908s Selecting previously unselected package r-cran-withr. 908s Preparing to unpack .../180-r-cran-withr_3.0.2+dfsg-1_all.deb ... 908s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 909s Selecting previously unselected package r-cran-tidyselect. 909s Preparing to unpack .../181-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 909s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 909s Selecting previously unselected package r-cran-dplyr. 909s Preparing to unpack .../182-r-cran-dplyr_1.1.4-4_arm64.deb ... 909s Unpacking r-cran-dplyr (1.1.4-4) ... 909s Selecting previously unselected package r-cran-purrr. 909s Preparing to unpack .../183-r-cran-purrr_1.0.4-1_arm64.deb ... 909s Unpacking r-cran-purrr (1.0.4-1) ... 909s Selecting previously unselected package r-cran-stringi. 909s Preparing to unpack .../184-r-cran-stringi_1.8.4-1build2_arm64.deb ... 909s Unpacking r-cran-stringi (1.8.4-1build2) ... 909s Selecting previously unselected package r-cran-stringr. 909s Preparing to unpack .../185-r-cran-stringr_1.5.1-1_all.deb ... 909s Unpacking r-cran-stringr (1.5.1-1) ... 909s Selecting previously unselected package r-cran-tidyr. 909s Preparing to unpack .../186-r-cran-tidyr_1.3.1-1_arm64.deb ... 909s Unpacking r-cran-tidyr (1.3.1-1) ... 909s Selecting previously unselected package r-cran-dbplyr. 909s Preparing to unpack .../187-r-cran-dbplyr_2.5.1+dfsg-1_all.deb ... 909s Unpacking r-cran-dbplyr (2.5.1+dfsg-1) ... 909s Selecting previously unselected package r-cran-filelock. 909s Preparing to unpack .../188-r-cran-filelock_1.0.3-1_arm64.deb ... 909s Unpacking r-cran-filelock (1.0.3-1) ... 909s Selecting previously unselected package r-bioc-biocfilecache. 909s Preparing to unpack .../189-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 909s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 909s Selecting previously unselected package r-cran-biocmanager. 909s Preparing to unpack .../190-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 909s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 909s Selecting previously unselected package r-bioc-biocversion. 909s Preparing to unpack .../191-r-bioc-biocversion_3.20.0-2_all.deb ... 909s Unpacking r-bioc-biocversion (3.20.0-2) ... 909s Selecting previously unselected package r-cran-rappdirs. 909s Preparing to unpack .../192-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 909s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 909s Selecting previously unselected package r-cran-yaml. 909s Preparing to unpack .../193-r-cran-yaml_2.3.10-1_arm64.deb ... 909s Unpacking r-cran-yaml (2.3.10-1) ... 909s Selecting previously unselected package r-bioc-annotationhub. 909s Preparing to unpack .../194-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ... 909s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ... 909s Selecting previously unselected package r-bioc-biocio. 909s Preparing to unpack .../195-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 909s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 909s Selecting previously unselected package r-cran-formatr. 909s Preparing to unpack .../196-r-cran-formatr_1.14-2_all.deb ... 909s Unpacking r-cran-formatr (1.14-2) ... 909s Selecting previously unselected package r-cran-lambda.r. 909s Preparing to unpack .../197-r-cran-lambda.r_1.2.4-2build2_all.deb ... 909s Unpacking r-cran-lambda.r (1.2.4-2build2) ... 909s Selecting previously unselected package r-cran-futile.options. 909s Preparing to unpack .../198-r-cran-futile.options_1.0.1-3build2_all.deb ... 909s Unpacking r-cran-futile.options (1.0.1-3build2) ... 909s Selecting previously unselected package r-cran-futile.logger. 910s Preparing to unpack .../199-r-cran-futile.logger_1.4.3-4build2_all.deb ... 910s Unpacking r-cran-futile.logger (1.4.3-4build2) ... 910s Selecting previously unselected package r-cran-snow. 910s Preparing to unpack .../200-r-cran-snow_1%3a0.4.4-2build1_all.deb ... 910s Unpacking r-cran-snow (1:0.4.4-2build1) ... 910s Selecting previously unselected package r-cran-codetools. 910s Preparing to unpack .../201-r-cran-codetools_0.2-20-1build1_all.deb ... 910s Unpacking r-cran-codetools (0.2-20-1build1) ... 910s Selecting previously unselected package r-cran-bh. 910s Preparing to unpack .../202-r-cran-bh_1.84.0-1_all.deb ... 910s Unpacking r-cran-bh (1.84.0-1) ... 910s Selecting previously unselected package r-bioc-biocparallel. 910s Preparing to unpack .../203-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 910s Unpacking r-bioc-biocparallel (1.40.0-2) ... 910s Selecting previously unselected package r-cran-hms. 910s Preparing to unpack .../204-r-cran-hms_1.1.4-1_all.deb ... 910s Unpacking r-cran-hms (1.1.4-1) ... 910s Selecting previously unselected package r-cran-prettyunits. 910s Preparing to unpack .../205-r-cran-prettyunits_1.2.0-1_all.deb ... 910s Unpacking r-cran-prettyunits (1.2.0-1) ... 910s Selecting previously unselected package r-cran-progress. 910s Preparing to unpack .../206-r-cran-progress_1.2.3-1_all.deb ... 910s Unpacking r-cran-progress (1.2.3-1) ... 910s Selecting previously unselected package r-cran-httr2. 910s Preparing to unpack .../207-r-cran-httr2_1.1.1-2_all.deb ... 910s Unpacking r-cran-httr2 (1.1.1-2) ... 910s Selecting previously unselected package r-cran-digest. 910s Preparing to unpack .../208-r-cran-digest_0.6.39-1_arm64.deb ... 910s Unpacking r-cran-digest (0.6.39-1) ... 910s Selecting previously unselected package r-cran-xml2. 910s Preparing to unpack .../209-r-cran-xml2_1.4.1-1_arm64.deb ... 910s Unpacking r-cran-xml2 (1.4.1-1) ... 910s Selecting previously unselected package r-bioc-biomart. 910s Preparing to unpack .../210-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 910s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 910s Selecting previously unselected package r-cran-bitops. 910s Preparing to unpack .../211-r-cran-bitops_1.0-9-1_arm64.deb ... 910s Unpacking r-cran-bitops (1.0-9-1) ... 910s Selecting previously unselected package r-bioc-rhtslib. 910s Preparing to unpack .../212-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 910s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 910s Selecting previously unselected package r-bioc-rsamtools. 910s Preparing to unpack .../213-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 910s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 910s Selecting previously unselected package r-cran-matrixstats. 910s Preparing to unpack .../214-r-cran-matrixstats_1.5.0-1_arm64.deb ... 910s Unpacking r-cran-matrixstats (1.5.0-1) ... 910s Selecting previously unselected package r-bioc-matrixgenerics. 910s Preparing to unpack .../215-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 910s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 910s Selecting previously unselected package r-cran-lattice. 910s Preparing to unpack .../216-r-cran-lattice_0.22-7-1_arm64.deb ... 910s Unpacking r-cran-lattice (0.22-7-1) ... 910s Selecting previously unselected package r-cran-matrix. 911s Preparing to unpack .../217-r-cran-matrix_1.7-4-1_arm64.deb ... 911s Unpacking r-cran-matrix (1.7-4-1) ... 911s Selecting previously unselected package r-cran-abind. 911s Preparing to unpack .../218-r-cran-abind_1.4-8-1build1_all.deb ... 911s Unpacking r-cran-abind (1.4-8-1build1) ... 911s Selecting previously unselected package r-bioc-s4arrays. 911s Preparing to unpack .../219-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 911s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 911s Selecting previously unselected package r-bioc-sparsearray. 911s Preparing to unpack .../220-r-bioc-sparsearray_1.6.2+dfsg-2_arm64.deb ... 911s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 911s Selecting previously unselected package r-bioc-delayedarray. 911s Preparing to unpack .../221-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 911s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 911s Selecting previously unselected package r-bioc-summarizedexperiment. 911s Preparing to unpack .../222-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 911s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 911s Selecting previously unselected package r-bioc-genomicalignments. 911s Preparing to unpack .../223-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 911s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 911s Selecting previously unselected package r-cran-rcurl. 911s Preparing to unpack .../224-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 911s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 911s Selecting previously unselected package r-cran-rjson. 911s Preparing to unpack .../225-r-cran-rjson_0.2.23-1_arm64.deb ... 911s Unpacking r-cran-rjson (0.2.23-1) ... 911s Selecting previously unselected package r-cran-restfulr. 911s Preparing to unpack .../226-r-cran-restfulr_0.0.15-1_arm64.deb ... 911s Unpacking r-cran-restfulr (0.0.15-1) ... 911s Selecting previously unselected package r-bioc-rtracklayer. 911s Preparing to unpack .../227-r-bioc-rtracklayer_1.66.0-3_arm64.deb ... 911s Unpacking r-bioc-rtracklayer (1.66.0-3) ... 911s Selecting previously unselected package r-bioc-bsgenome. 911s Preparing to unpack .../228-r-bioc-bsgenome_1.74.0-2_all.deb ... 911s Unpacking r-bioc-bsgenome (1.74.0-2) ... 911s Selecting previously unselected package r-cran-locfit. 911s Preparing to unpack .../229-r-cran-locfit_1.5-9.12-1_arm64.deb ... 911s Unpacking r-cran-locfit (1.5-9.12-1) ... 911s Selecting previously unselected package r-cran-gtable. 911s Preparing to unpack .../230-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 911s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 911s Selecting previously unselected package r-cran-isoband. 911s Preparing to unpack .../231-r-cran-isoband_0.2.7-1_arm64.deb ... 911s Unpacking r-cran-isoband (0.2.7-1) ... 911s Selecting previously unselected package r-cran-s7. 911s Preparing to unpack .../232-r-cran-s7_0.2.0-1_arm64.deb ... 911s Unpacking r-cran-s7 (0.2.0-1) ... 911s Selecting previously unselected package r-cran-farver. 912s Preparing to unpack .../233-r-cran-farver_2.1.2-1_arm64.deb ... 912s Unpacking r-cran-farver (2.1.2-1) ... 912s Selecting previously unselected package r-cran-labeling. 912s Preparing to unpack .../234-r-cran-labeling_0.4.3-1_all.deb ... 912s Unpacking r-cran-labeling (0.4.3-1) ... 912s Selecting previously unselected package r-cran-rcolorbrewer. 912s Preparing to unpack .../235-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 912s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 912s Selecting previously unselected package r-cran-viridislite. 912s Preparing to unpack .../236-r-cran-viridislite_0.4.3-1_all.deb ... 912s Unpacking r-cran-viridislite (0.4.3-1) ... 912s Selecting previously unselected package r-cran-scales. 912s Preparing to unpack .../237-r-cran-scales_1.4.0-1_all.deb ... 912s Unpacking r-cran-scales (1.4.0-1) ... 912s Selecting previously unselected package r-cran-ggplot2. 912s Preparing to unpack .../238-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 912s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 912s Selecting previously unselected package r-cran-littler. 912s Preparing to unpack .../239-r-cran-littler_0.3.22-1_arm64.deb ... 912s Unpacking r-cran-littler (0.3.22-1) ... 912s Selecting previously unselected package r-cran-pkgkitten. 912s Preparing to unpack .../240-r-cran-pkgkitten_0.2.4-1_all.deb ... 912s Unpacking r-cran-pkgkitten (0.2.4-1) ... 912s Selecting previously unselected package r-cran-rcpp. 912s Preparing to unpack .../241-r-cran-rcpp_1.1.0-1_arm64.deb ... 912s Unpacking r-cran-rcpp (1.1.0-1) ... 912s Selecting previously unselected package r-cran-rcpparmadillo. 912s Preparing to unpack .../242-r-cran-rcpparmadillo_15.2.3-1-1_arm64.deb ... 912s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ... 912s Selecting previously unselected package r-bioc-deseq2. 912s Preparing to unpack .../243-r-bioc-deseq2_1.46.0+dfsg-2_arm64.deb ... 912s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ... 912s Selecting previously unselected package r-cran-hwriter. 912s Preparing to unpack .../244-r-cran-hwriter_1.3.2.1-1_all.deb ... 912s Unpacking r-cran-hwriter (1.3.2.1-1) ... 912s Selecting previously unselected package r-cran-statmod. 912s Preparing to unpack .../245-r-cran-statmod_1.5.0-1_arm64.deb ... 912s Unpacking r-cran-statmod (1.5.0-1) ... 912s Selecting previously unselected package r-bioc-geneplotter. 912s Preparing to unpack .../246-r-bioc-geneplotter_1.84.0+dfsg-2_all.deb ... 912s Unpacking r-bioc-geneplotter (1.84.0+dfsg-2) ... 912s Selecting previously unselected package r-cran-survival. 913s Preparing to unpack .../247-r-cran-survival_3.8-6-1_arm64.deb ... 913s Unpacking r-cran-survival (3.8-6-1) ... 913s Selecting previously unselected package r-bioc-genefilter. 913s Preparing to unpack .../248-r-bioc-genefilter_1.88.0-2_arm64.deb ... 913s Unpacking r-bioc-genefilter (1.88.0-2) ... 913s Selecting previously unselected package r-bioc-dexseq. 913s Preparing to unpack .../249-r-bioc-dexseq_1.52.0+dfsg-2_all.deb ... 913s Unpacking r-bioc-dexseq (1.52.0+dfsg-2) ... 913s Selecting previously unselected package r-bioc-limma. 913s Preparing to unpack .../250-r-bioc-limma_3.62.2+dfsg-1_arm64.deb ... 913s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 913s Selecting previously unselected package r-bioc-edger. 913s Preparing to unpack .../251-r-bioc-edger_4.4.2+dfsg-1_arm64.deb ... 913s Unpacking r-bioc-edger (4.4.2+dfsg-1) ... 913s Selecting previously unselected package r-bioc-genomicfeatures. 913s Preparing to unpack .../252-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 913s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 913s Selecting previously unselected package r-bioc-protgenerics. 913s Preparing to unpack .../253-r-bioc-protgenerics_1.38.0-2_all.deb ... 913s Unpacking r-bioc-protgenerics (1.38.0-2) ... 913s Selecting previously unselected package r-bioc-ensembldb. 913s Preparing to unpack .../254-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ... 913s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ... 913s Selecting previously unselected package r-cran-locfdr. 913s Preparing to unpack .../255-r-cran-locfdr_1.1-8-2_all.deb ... 913s Unpacking r-cran-locfdr (1.1-8-2) ... 913s Selecting previously unselected package r-cran-pbapply. 913s Preparing to unpack .../256-r-cran-pbapply_1.7-2-1_all.deb ... 913s Unpacking r-cran-pbapply (1.7-2-1) ... 913s Selecting previously unselected package r-cran-boot. 913s Preparing to unpack .../257-r-cran-boot_1.3-32-1_all.deb ... 913s Unpacking r-cran-boot (1.3-32-1) ... 913s Selecting previously unselected package r-bioc-saturn. 913s Preparing to unpack .../258-r-bioc-saturn_1.14.0+dfsg-2_all.deb ... 913s Unpacking r-bioc-saturn (1.14.0+dfsg-2) ... 913s Selecting previously unselected package r-cran-nlme. 913s Preparing to unpack .../259-r-cran-nlme_3.1.168-1_arm64.deb ... 913s Unpacking r-cran-nlme (3.1.168-1) ... 913s Selecting previously unselected package r-cran-mgcv. 913s Preparing to unpack .../260-r-cran-mgcv_1.9-4-1_arm64.deb ... 913s Unpacking r-cran-mgcv (1.9-4-1) ... 913s Selecting previously unselected package r-bioc-sva. 913s Preparing to unpack .../261-r-bioc-sva_3.54.0-2_arm64.deb ... 913s Unpacking r-bioc-sva (3.54.0-2) ... 913s Selecting previously unselected package r-cran-clipr. 913s Preparing to unpack .../262-r-cran-clipr_0.8.0-1build1_all.deb ... 913s Unpacking r-cran-clipr (0.8.0-1build1) ... 913s Selecting previously unselected package r-cran-tzdb. 913s Preparing to unpack .../263-r-cran-tzdb_0.5.0-1_arm64.deb ... 913s Unpacking r-cran-tzdb (0.5.0-1) ... 914s Selecting previously unselected package r-cran-vroom. 914s Preparing to unpack .../264-r-cran-vroom_1.7.0-1_arm64.deb ... 914s Unpacking r-cran-vroom (1.7.0-1) ... 914s Selecting previously unselected package r-cran-readr. 914s Preparing to unpack .../265-r-cran-readr_2.1.6-1_arm64.deb ... 914s Unpacking r-cran-readr (2.1.6-1) ... 914s Selecting previously unselected package r-bioc-pfamanalyzer. 914s Preparing to unpack .../266-r-bioc-pfamanalyzer_1.6.0+dfsg-2_all.deb ... 914s Unpacking r-bioc-pfamanalyzer (1.6.0+dfsg-2) ... 914s Selecting previously unselected package r-cran-plyr. 914s Preparing to unpack .../267-r-cran-plyr_1.8.9-1_arm64.deb ... 914s Unpacking r-cran-plyr (1.8.9-1) ... 914s Selecting previously unselected package r-cran-reshape2. 914s Preparing to unpack .../268-r-cran-reshape2_1.4.4-2build2_arm64.deb ... 914s Unpacking r-cran-reshape2 (1.4.4-2build2) ... 914s Selecting previously unselected package r-cran-gridextra. 914s Preparing to unpack .../269-r-cran-gridextra_2.3-3build2_all.deb ... 914s Unpacking r-cran-gridextra (2.3-3build2) ... 914s Selecting previously unselected package r-cran-venndiagram. 914s Preparing to unpack .../270-r-cran-venndiagram_1.7.3-1_all.deb ... 914s Unpacking r-cran-venndiagram (1.7.3-1) ... 914s Selecting previously unselected package r-bioc-tximport. 914s Preparing to unpack .../271-r-bioc-tximport_1.34.0+dfsg-2_all.deb ... 914s Unpacking r-bioc-tximport (1.34.0+dfsg-2) ... 914s Selecting previously unselected package r-bioc-txdbmaker. 914s Preparing to unpack .../272-r-bioc-txdbmaker_1.2.1+ds-2_all.deb ... 914s Unpacking r-bioc-txdbmaker (1.2.1+ds-2) ... 914s Selecting previously unselected package r-bioc-tximeta. 914s Preparing to unpack .../273-r-bioc-tximeta_1.24.0+dfsg-2_all.deb ... 914s Unpacking r-bioc-tximeta (1.24.0+dfsg-2) ... 914s Selecting previously unselected package r-bioc-pwalign. 914s Preparing to unpack .../274-r-bioc-pwalign_1.2.0-3_arm64.deb ... 914s Unpacking r-bioc-pwalign (1.2.0-3) ... 914s Selecting previously unselected package r-bioc-isoformswitchanalyzer. 914s Preparing to unpack .../275-r-bioc-isoformswitchanalyzer_2.6.0+ds-2_arm64.deb ... 914s Unpacking r-bioc-isoformswitchanalyzer (2.6.0+ds-2) ... 914s Selecting previously unselected package r-cran-base64enc. 914s Preparing to unpack .../276-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 914s Unpacking r-cran-base64enc (0.1-3-3build1) ... 914s Selecting previously unselected package r-cran-htmltools. 914s Preparing to unpack .../277-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 914s Unpacking r-cran-htmltools (0.5.8.1-1) ... 914s Selecting previously unselected package r-cran-jquerylib. 914s Preparing to unpack .../278-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 914s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 914s Selecting previously unselected package r-cran-fs. 914s Preparing to unpack .../279-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 914s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 914s Selecting previously unselected package r-cran-sass. 914s Preparing to unpack .../280-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 914s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 915s Selecting previously unselected package r-cran-bslib. 915s Preparing to unpack .../281-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 915s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 915s Selecting previously unselected package r-cran-commonmark. 915s Preparing to unpack .../282-r-cran-commonmark_1.9.5-1_arm64.deb ... 915s Unpacking r-cran-commonmark (1.9.5-1) ... 915s Selecting previously unselected package r-cran-evaluate. 915s Preparing to unpack .../283-r-cran-evaluate_1.0.5-1_all.deb ... 915s Unpacking r-cran-evaluate (1.0.5-1) ... 915s Selecting previously unselected package r-cran-fontawesome. 915s Preparing to unpack .../284-r-cran-fontawesome_0.5.3-1_all.deb ... 915s Unpacking r-cran-fontawesome (0.5.3-1) ... 915s Selecting previously unselected package r-cran-xfun. 915s Preparing to unpack .../285-r-cran-xfun_0.55+dfsg-1_arm64.deb ... 915s Unpacking r-cran-xfun (0.55+dfsg-1) ... 915s Selecting previously unselected package r-cran-highr. 915s Preparing to unpack .../286-r-cran-highr_0.11+dfsg-1_all.deb ... 915s Unpacking r-cran-highr (0.11+dfsg-1) ... 915s Selecting previously unselected package r-cran-later. 915s Preparing to unpack .../287-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 915s Unpacking r-cran-later (1.4.1+dfsg-1) ... 915s Selecting previously unselected package r-cran-promises. 915s Preparing to unpack .../288-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 915s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 915s Selecting previously unselected package r-cran-httpuv. 915s Preparing to unpack .../289-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 915s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 915s Selecting previously unselected package libjs-mathjax. 915s Preparing to unpack .../290-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 915s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 916s Selecting previously unselected package r-cran-knitr. 916s Preparing to unpack .../291-r-cran-knitr_1.51+dfsg-1_all.deb ... 916s Unpacking r-cran-knitr (1.51+dfsg-1) ... 916s Selecting previously unselected package r-cran-tinytex. 916s Preparing to unpack .../292-r-cran-tinytex_0.58-1_all.deb ... 916s Unpacking r-cran-tinytex (0.58-1) ... 916s Selecting previously unselected package libjs-modernizr. 916s Preparing to unpack .../293-libjs-modernizr_3.13.0-0.1build1_all.deb ... 916s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 916s Selecting previously unselected package r-cran-sourcetools. 916s Preparing to unpack .../294-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 916s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 916s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 916s Preparing to unpack .../295-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 916s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 916s Selecting previously unselected package r-cran-shiny. 916s Preparing to unpack .../296-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 916s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 916s Selecting previously unselected package r-cran-rmarkdown. 916s Preparing to unpack .../297-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 916s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 916s Setting up libjs-json (0~20221030+~1.0.8-1build1) ... 916s Setting up javascript-common (12+nmu1build1) ... 916s Setting up libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 916s Setting up libpixman-1-0:arm64 (0.46.4-1) ... 916s Setting up libsharpyuv0:arm64 (1.5.0-0.1build1) ... 916s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ... 916s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 916s Setting up libzstd-dev:arm64 (1.5.7+dfsg-3) ... 916s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ... 916s Setting up libxrender1:arm64 (1:0.9.12-1) ... 916s Setting up libdatrie1:arm64 (0.2.14-1) ... 916s Setting up libjs-popper.js (1.16.1+ds-6build1) ... 916s Setting up libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 916s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 916s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 916s Setting up unzip (6.0-29ubuntu1) ... 916s Setting up x11-common (1:7.7+24ubuntu1) ... 916s Setting up node-html5shiv (3.7.3+dfsg-5) ... 916s Setting up libdeflate0:arm64 (1.23-2build1) ... 916s Setting up linux-libc-dev:arm64 (6.19.0-3.3) ... 916s Setting up libjs-microplugin.js (0.0.3+dfsg-2) ... 916s Setting up libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 916s Setting up libgomp1:arm64 (15.2.0-12ubuntu1) ... 916s Setting up libjs-modernizr (3.13.0-0.1build1) ... 916s Setting up libjbig0:arm64 (2.1-6.1ubuntu3) ... 916s Setting up libpcre2-16-0:arm64 (10.46-1) ... 916s Setting up libjs-es5-shim (4.6.7-2) ... 916s Setting up zip (3.0-15ubuntu3) ... 916s Setting up libpcre2-32-0:arm64 (10.46-1) ... 916s Setting up libblas3:arm64 (3.12.1-7ubuntu1) ... 916s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 916s Setting up libtirpc-dev:arm64 (1.3.6+ds-1) ... 916s Setting up libpkgconf3:arm64 (1.8.1-4build1) ... 916s Setting up rpcsvc-proto (1.4.3-1build1) ... 916s Setting up libjs-d3 (3.5.17-4build1) ... 916s Setting up fonts-dejavu-mono (2.37-8build1) ... 916s Setting up libmpc3:arm64 (1.3.1-2) ... 916s Setting up libtcl8.6:arm64 (8.6.17+dfsg-1build1) ... 916s Setting up icu-devtools (78.2-1ubuntu1) ... 916s Setting up fonts-dejavu-core (2.37-8build1) ... 916s Setting up pkgconf-bin (1.8.1-4build1) ... 916s Setting up libjpeg-turbo8:arm64 (2.1.5-4ubuntu3) ... 916s Setting up libgfortran5:arm64 (15.2.0-12ubuntu1) ... 916s Setting up libwebp7:arm64 (1.5.0-0.1build1) ... 916s Setting up liblzma-dev:arm64 (5.8.2-2) ... 916s Setting up libubsan1:arm64 (15.2.0-12ubuntu1) ... 916s Setting up libpcre2-posix3:arm64 (10.46-1) ... 916s Setting up libjs-highlight.js (10.7.3+dfsg-2) ... 917s Setting up libhwasan0:arm64 (15.2.0-12ubuntu1) ... 917s Setting up libcrypt-dev:arm64 (1:4.5.1-1) ... 917s Setting up libasan8:arm64 (15.2.0-12ubuntu1) ... 917s Setting up liblua5.4-0:arm64 (5.4.8-1) ... 917s Setting up libharfbuzz0b:arm64 (12.3.2-1) ... 917s Setting up libthai-data (0.1.30-1) ... 917s Setting up node-bootstrap-sass (3.4.3-2) ... 917s Setting up libjs-prettify (2015.12.04+dfsg-3) ... 917s Setting up libxss1:arm64 (1:1.2.3-1build4) ... 917s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ... 917s Setting up libpaper2:arm64 (2.2.5-0.3build1) ... 917s Setting up pandoc-data (3.1.11.1-3build1) ... 917s Setting up libtsan2:arm64 (15.2.0-12ubuntu1) ... 917s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 917s Setting up libisl23:arm64 (0.27-1build1) ... 917s Setting up libc-dev-bin (2.42-2ubuntu4) ... 917s Setting up libdeflate-dev:arm64 (1.23-2build1) ... 917s Setting up node-normalize.css (8.0.1-5.1) ... 917s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 917s Setting up xdg-utils (1.2.1-2ubuntu2) ... 917s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 917s Setting up libcc1-0:arm64 (15.2.0-12ubuntu1) ... 917s Setting up liblsan0:arm64 (15.2.0-12ubuntu1) ... 917s Setting up libblas-dev:arm64 (3.12.1-7ubuntu1) ... 917s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 917s Setting up dctrl-tools (2.24-3build4) ... 917s Setting up libjs-bootstrap (3.4.1+dfsg-6) ... 917s Setting up libitm1:arm64 (15.2.0-12ubuntu1) ... 917s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 917s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 917s Setting up cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 917s Setting up libice6:arm64 (2:1.1.1-1build1) ... 917s Setting up liblapack3:arm64 (3.12.1-7ubuntu1) ... 917s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 917s Setting up libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 917s Setting up fontconfig-config (2.17.1-3ubuntu1) ... 917s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 917s Setting up libpaper-utils (2.2.5-0.3build1) ... 917s Setting up libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 917s Setting up libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 917s Setting up pkgconf:arm64 (1.8.1-4build1) ... 917s Setting up libthai0:arm64 (0.1.30-1) ... 917s Setting up cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 917s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ... 917s Setting up pandoc (3.1.11.1+ds-4) ... 917s Setting up liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 917s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 917s Setting up cpp-15 (15.2.0-12ubuntu1) ... 917s Setting up libtiff6:arm64 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r-cran-vroom (1.7.0-1) ... 919s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 919s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 919s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 919s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 919s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 919s Setting up r-cran-readr (2.1.6-1) ... 919s Setting up r-cran-tidyr (1.3.1-1) ... 919s Setting up r-cran-dbplyr (2.5.1+dfsg-1) ... 919s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 919s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 919s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 919s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 919s Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ... 919s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 919s Setting up r-bioc-pfamanalyzer (1.6.0+dfsg-2) ... 919s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 919s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 919s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 919s Setting up 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(2.6.0+ds-2) ... 920s Processing triggers for libc-bin (2.42-2ubuntu4) ... 920s Processing triggers for man-db (2.13.1-1build1) ... 920s Processing triggers for install-info (7.2-5) ... 921s autopkgtest [23:33:39]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 921s autopkgtest [23:33:39]: test pkg-r-autopkgtest: [----------------------- 921s Test: Try to load the R library IsoformSwitchAnalyzeR 922s 922s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 922s Copyright (C) 2025 The R Foundation for Statistical Computing 922s Platform: aarch64-unknown-linux-gnu 922s 922s R is free software and comes with ABSOLUTELY NO WARRANTY. 922s You are welcome to redistribute it under certain conditions. 922s Type 'license()' or 'licence()' for distribution details. 922s 922s R is a collaborative project with many contributors. 922s Type 'contributors()' for more information and 922s 'citation()' on how to cite R or R packages in publications. 922s 922s Type 'demo()' for some demos, 'help()' for on-line help, or 922s 'help.start()' for an HTML browser interface to help. 922s Type 'q()' to quit R. 922s 922s > library('IsoformSwitchAnalyzeR') 922s Loading required package: limma 922s Loading required package: DEXSeq 922s Loading required package: BiocParallel 922s Loading required package: Biobase 922s Loading required package: BiocGenerics 922s 922s Attaching package: ‘BiocGenerics’ 922s 922s The following object is masked from ‘package:limma’: 922s 922s plotMA 922s 922s The following objects are masked from ‘package:stats’: 922s 922s IQR, mad, sd, var, xtabs 922s 922s The following objects are masked from ‘package:base’: 922s 922s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 922s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 922s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 922s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 922s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 922s table, tapply, union, unique, unsplit, which.max, which.min 922s 922s Welcome to Bioconductor 922s 922s Vignettes contain introductory material; view with 922s 'browseVignettes()'. To cite Bioconductor, see 922s 'citation("Biobase")', and for packages 'citation("pkgname")'. 922s 922s Loading required package: SummarizedExperiment 922s Loading required package: MatrixGenerics 922s Loading required package: matrixStats 922s 922s Attaching package: ‘matrixStats’ 922s 922s The following objects are masked from ‘package:Biobase’: 922s 922s anyMissing, rowMedians 922s 922s 922s Attaching package: ‘MatrixGenerics’ 922s 922s The following objects are masked from ‘package:matrixStats’: 922s 922s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 922s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 922s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 922s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 922s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 922s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 922s colWeightedMeans, colWeightedMedians, colWeightedSds, 922s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 922s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 922s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 922s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 922s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 922s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 922s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 922s rowWeightedSds, rowWeightedVars 922s 922s The following object is masked from ‘package:Biobase’: 922s 922s rowMedians 922s 922s Loading required package: GenomicRanges 922s Loading required package: stats4 922s Loading required package: S4Vectors 923s 923s Attaching package: ‘S4Vectors’ 923s 923s The following object is masked from ‘package:utils’: 923s 923s findMatches 923s 923s The following objects are masked from ‘package:base’: 923s 923s expand.grid, I, unname 923s 923s Loading required package: IRanges 924s Loading required package: GenomeInfoDb 927s Loading required package: DESeq2 929s Loading required package: AnnotationDbi 929s Loading required package: RColorBrewer 931s Loading required package: satuRn 931s Loading required package: sva 931s Loading required package: mgcv 931s Loading required package: nlme 931s 931s Attaching package: ‘nlme’ 931s 931s The following object is masked from ‘package:IRanges’: 931s 931s collapse 931s 931s This is mgcv 1.9-4. For overview type '?mgcv'. 931s Loading required package: genefilter 931s 931s Attaching package: ‘genefilter’ 931s 931s The following objects are masked from ‘package:MatrixGenerics’: 931s 931s rowSds, rowVars 931s 931s The following objects are masked from ‘package:matrixStats’: 931s 931s rowSds, rowVars 931s 931s Loading required package: ggplot2 931s Loading required package: pfamAnalyzeR 931s Loading required package: readr 931s 931s Attaching package: ‘readr’ 931s 931s The following object is masked from ‘package:genefilter’: 931s 931s spec 931s 931s Loading required package: stringr 931s Loading required package: dplyr 931s 931s Attaching package: ‘dplyr’ 931s 931s The following object is masked from ‘package:nlme’: 931s 931s collapse 931s 931s The following object is masked from ‘package:AnnotationDbi’: 931s 931s select 931s 931s The following objects are masked from ‘package:GenomicRanges’: 931s 931s intersect, setdiff, union 931s 931s The following object is masked from ‘package:GenomeInfoDb’: 931s 931s intersect 931s 931s The following objects are masked from ‘package:IRanges’: 931s 931s collapse, desc, intersect, setdiff, slice, union 931s 931s The following objects are masked from ‘package:S4Vectors’: 931s 931s first, intersect, rename, setdiff, setequal, union 931s 931s The following object is masked from ‘package:matrixStats’: 931s 931s count 931s 931s The following object is masked from ‘package:Biobase’: 931s 931s combine 931s 931s The following objects are masked from ‘package:BiocGenerics’: 931s 931s combine, intersect, setdiff, union 931s 931s The following objects are masked from ‘package:stats’: 931s 931s filter, lag 931s 931s The following objects are masked from ‘package:base’: 931s 931s intersect, setdiff, setequal, union 931s 935s > 935s find: ‘tests’: No such file or directory 935s autopkgtest [23:33:53]: test pkg-r-autopkgtest: -----------------------] 936s pkg-r-autopkgtest PASS 936s autopkgtest [23:33:54]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 936s autopkgtest [23:33:54]: @@@@@@@@@@@@@@@@@@@@ summary 936s pkg-r-autopkgtest PASS