0s autopkgtest [22:46:31]: starting date and time: 2026-02-09 22:46:31+0000 0s autopkgtest [22:46:31]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [22:46:31]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8u0h8szt/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lattice --apt-upgrade r-bioc-hilbertvis --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lattice/0.22-9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-arm64-23.secgroup --name adt-resolute-arm64-r-bioc-hilbertvis-20260209-224631-juju-7f2275-prod-proposed-migration-environment-2-4b684fa4-f885-4bf4-aa56-d18c1abf1475 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-arm64-r-bioc-hilbertvis-20260209-224631-juju-7f2275-prod-proposed-migration-environment-2-4b684fa4-f885-4bf4-aa56-d18c1abf1475 from image adt/ubuntu-resolute-arm64-server-20260209.img (UUID 793037ca-75af-461b-82de-f8081300b2e3)... 116s autopkgtest [22:48:27]: testbed dpkg architecture: arm64 116s autopkgtest [22:48:27]: testbed apt version: 3.1.15 116s autopkgtest [22:48:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 116s autopkgtest [22:48:27]: testbed release detected to be: None 117s autopkgtest [22:48:28]: updating testbed package index (apt update) 117s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 117s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 117s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 117s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 118s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 120s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 120s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 120s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [246 kB] 120s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [6216 B] 120s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [304 B] 121s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [1580 kB] 123s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [32.0 kB] 123s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [21.7 kB] 123s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [688 B] 125s Fetched 3862 kB in 6s (636 kB/s) 126s Reading package lists... 126s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 126s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 126s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 126s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 127s Reading package lists... 127s Reading package lists... 127s Building dependency tree... 127s Reading state information... 128s Calculating upgrade... 128s The following packages will be upgraded: 128s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 128s libip6tc2 libxtables12 wget 129s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 129s Need to get 2534 kB of archives. 129s After this operation, 18.4 kB of additional disk space will be used. 129s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 iptables arm64 1.8.11-2ubuntu3 [386 kB] 129s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libip4tc2 arm64 1.8.11-2ubuntu3 [24.3 kB] 129s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libip6tc2 arm64 1.8.11-2ubuntu3 [24.7 kB] 129s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libxtables12 arm64 1.8.11-2ubuntu3 [36.7 kB] 129s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 iproute2 arm64 6.18.0-1ubuntu1 [1171 kB] 131s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libcryptsetup12 arm64 2:2.8.0-1ubuntu3 [274 kB] 131s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 wget arm64 1.25.0-2ubuntu4 [344 kB] 131s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cryptsetup-bin arm64 2:2.8.0-1ubuntu3 [227 kB] 131s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 dracut-install arm64 109-11ubuntu1 [45.3 kB] 131s dpkg-preconfigure: unable to re-open stdin: No such file or directory 131s Fetched 2534 kB in 2s (1015 kB/s) 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136597 files and directories currently installed.) 131s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_arm64.deb ... 131s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 131s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_arm64.deb ... 131s Unpacking libip4tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 131s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_arm64.deb ... 131s Unpacking libip6tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 131s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_arm64.deb ... 131s Unpacking libxtables12:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 132s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_arm64.deb ... 132s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 132s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_arm64.deb ... 132s Unpacking libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 132s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_arm64.deb ... 132s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 132s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_arm64.deb ... 132s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 132s Preparing to unpack .../8-dracut-install_109-11ubuntu1_arm64.deb ... 132s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 132s Setting up libip4tc2:arm64 (1.8.11-2ubuntu3) ... 132s Setting up wget (1.25.0-2ubuntu4) ... 132s Setting up libip6tc2:arm64 (1.8.11-2ubuntu3) ... 132s Setting up libxtables12:arm64 (1.8.11-2ubuntu3) ... 132s Setting up dracut-install (109-11ubuntu1) ... 132s Setting up libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) ... 132s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 132s Setting up iptables (1.8.11-2ubuntu3) ... 132s Setting up iproute2 (6.18.0-1ubuntu1) ... 132s Processing triggers for man-db (2.13.1-1build1) ... 133s Processing triggers for install-info (7.2-5) ... 133s Processing triggers for libc-bin (2.42-2ubuntu4) ... 134s autopkgtest [22:48:45]: upgrading testbed (apt dist-upgrade and autopurge) 134s Reading package lists... 134s Building dependency tree... 134s Reading state information... 134s Calculating upgrade... 134s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 135s Solving dependencies... 135s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 138s autopkgtest [22:48:49]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 19:46:27 UTC 2026 138s autopkgtest [22:48:49]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-hilbertvis 143s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-hilbertvis 1.64.0-2 (dsc) [2175 B] 143s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-hilbertvis 1.64.0-2 (tar) [1266 kB] 143s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-hilbertvis 1.64.0-2 (diff) [4676 B] 143s gpgv: Signature made Sat Jan 11 16:45:50 2025 UTC 143s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 143s gpgv: issuer "crusoe@debian.org" 143s gpgv: Can't check signature: No public key 143s dpkg-source: warning: cannot verify inline signature for ./r-bioc-hilbertvis_1.64.0-2.dsc: no acceptable signature found 143s autopkgtest [22:48:54]: testing package r-bioc-hilbertvis version 1.64.0-2 144s autopkgtest [22:48:55]: build not needed 148s autopkgtest [22:48:59]: test pkg-r-autopkgtest: preparing testbed 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 148s Solving dependencies... 149s The following NEW packages will be installed: 149s build-essential cpp cpp-15 cpp-15-aarch64-linux-gnu cpp-aarch64-linux-gnu 149s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 149s g++ g++-15 g++-15-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-15 149s gcc-15-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-15 149s gfortran-15-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 149s libasan8 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 149s libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 149s libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 libgraphite2-3 149s libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 149s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 149s liblapack-dev liblapack3 liblerc4 liblsan0 liblzma-dev libmpc3 149s libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 149s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 149s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libreadline-dev 149s libsharpyuv0 libsm6 libstdc++-15-dev libtcl8.6 libthai-data libthai0 149s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxcb-render0 149s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 libzstd-dev linux-libc-dev 149s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 149s r-bioc-biocgenerics r-bioc-hilbertvis r-bioc-iranges r-bioc-s4vectors 149s r-cran-lattice rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev 149s 0 upgraded, 109 newly installed, 0 to remove and 0 not upgraded. 149s Need to get 149 MB of archives. 149s After this operation, 468 MB of additional disk space will be used. 149s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libc-dev-bin arm64 2.42-2ubuntu4 [22.5 kB] 149s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 linux-libc-dev arm64 6.19.0-3.3 [1819 kB] 153s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libcrypt-dev arm64 1:4.5.1-1 [123 kB] 153s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 rpcsvc-proto arm64 1.4.3-1build1 [65.6 kB] 153s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 libc6-dev arm64 2.42-2ubuntu4 [1765 kB] 156s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1build1 [676 kB] 157s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-2 [55.6 kB] 157s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [11.7 MB] 185s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-12ubuntu1 [1030 B] 185s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 185s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 185s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-12ubuntu1 [49.0 kB] 185s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 185s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-12ubuntu1 [27.8 kB] 185s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-12ubuntu1 [2920 kB] 190s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-12ubuntu1 [1316 kB] 192s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-12ubuntu1 [2688 kB] 196s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-12ubuntu1 [1175 kB] 198s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-12ubuntu1 [1638 kB] 201s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-12ubuntu1 [2600 kB] 205s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [23.1 MB] 245s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-12ubuntu1 [519 kB] 245s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 245s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 245s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-12ubuntu1 [2549 kB] 249s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [13.2 MB] 274s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-12ubuntu1 [25.3 kB] 274s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 274s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 274s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu2 [5254 B] 274s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 dctrl-tools arm64 2.24-3build4 [102 kB] 274s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 274s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 275s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 275s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 275s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 275s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 275s Get:38 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran-15-dev arm64 15.2.0-12ubuntu1 [490 kB] 275s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [12.5 MB] 298s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15 arm64 15.2.0-12ubuntu1 [18.1 kB] 298s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1022 B] 298s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran arm64 4:15.2.0-4ubuntu1 [1160 B] 298s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 icu-devtools arm64 78.2-1ubuntu1 [207 kB] 298s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 298s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas-dev arm64 3.12.1-7ubuntu1 [160 kB] 298s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-dev arm64 1.0.8-6build2 [34.9 kB] 298s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 298s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 298s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 298s Get:50 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 298s Get:51 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 300s Get:52 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 300s Get:53 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2build1 [46.8 kB] 300s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate-dev arm64 1.23-2build1 [54.3 kB] 300s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 300s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.2-1 [510 kB] 300s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 300s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 300s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libicu-dev arm64 78.2-1ubuntu1 [12.5 MB] 321s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu3 [161 kB] 321s Get:61 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu3 [301 kB] 321s Get:62 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 321s Get:63 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 321s Get:64 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 321s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 326s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack-dev arm64 3.12.1-7ubuntu1 [4456 kB] 334s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 334s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 libncurses-dev arm64 6.6+20251231-1 [391 kB] 334s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 334s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 334s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 334s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 334s Get:73 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 334s Get:74 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 334s Get:75 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 334s Get:76 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-16-0 arm64 10.46-1 [225 kB] 334s Get:77 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-32-0 arm64 10.46-1 [213 kB] 334s Get:78 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-posix3 arm64 10.46-1 [7300 B] 334s Get:79 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-dev arm64 10.46-1 [772 kB] 335s Get:80 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 335s Get:81 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 337s Get:82 http://ftpmaster.internal/ubuntu resolute/main arm64 libpng-dev arm64 1.6.54-1 [268 kB] 337s Get:83 http://ftpmaster.internal/ubuntu resolute/main arm64 libreadline-dev arm64 8.3-3 [199 kB] 337s Get:84 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 337s Get:85 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1build1 [16.8 kB] 337s Get:86 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1build1 [983 kB] 339s Get:87 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 339s Get:88 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 339s Get:89 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 339s Get:90 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 339s Get:91 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 339s Get:92 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 341s Get:93 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 341s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-3 [349 kB] 341s Get:95 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu3 [170 kB] 341s Get:96 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 341s Get:97 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 341s Get:98 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 388s Get:99 http://ftpmaster.internal/ubuntu resolute/main arm64 liblzma-dev arm64 5.8.2-2 [180 kB] 388s Get:100 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 388s Get:101 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 388s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 388s Get:103 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 388s Get:104 http://ftpmaster.internal/ubuntu resolute/universe arm64 pkg-r-autopkgtest all 20250812 [6158 B] 388s Get:105 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 389s Get:106 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-lattice arm64 0.22-9-1 [1399 kB] 391s Get:107 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-hilbertvis arm64 1.64.0-2 [1136 kB] 393s Get:108 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 397s Get:109 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 401s Preconfiguring packages ... 401s Fetched 149 MB in 4min 12s (592 kB/s) 401s Selecting previously unselected package libc-dev-bin. 401s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136600 files and directories currently installed.) 401s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_arm64.deb ... 401s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 401s Selecting previously unselected package linux-libc-dev:arm64. 401s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_arm64.deb ... 401s Unpacking linux-libc-dev:arm64 (6.19.0-3.3) ... 401s Selecting previously unselected package libcrypt-dev:arm64. 401s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_arm64.deb ... 401s Unpacking libcrypt-dev:arm64 (1:4.5.1-1) ... 401s Selecting previously unselected package rpcsvc-proto. 401s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_arm64.deb ... 401s Unpacking rpcsvc-proto (1.4.3-1build1) ... 401s Selecting previously unselected package libc6-dev:arm64. 401s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_arm64.deb ... 401s Unpacking libc6-dev:arm64 (2.42-2ubuntu4) ... 401s Selecting previously unselected package libisl23:arm64. 401s Preparing to unpack .../005-libisl23_0.27-1build1_arm64.deb ... 401s Unpacking libisl23:arm64 (0.27-1build1) ... 401s Selecting previously unselected package libmpc3:arm64. 401s Preparing to unpack .../006-libmpc3_1.3.1-2_arm64.deb ... 401s Unpacking libmpc3:arm64 (1.3.1-2) ... 401s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 402s Preparing to unpack .../007-cpp-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package cpp-15. 402s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package cpp-aarch64-linux-gnu. 402s Preparing to unpack .../009-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 402s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 402s Selecting previously unselected package cpp. 402s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 402s Unpacking cpp (4:15.2.0-4ubuntu1) ... 402s Selecting previously unselected package libcc1-0:arm64. 402s Preparing to unpack .../011-libcc1-0_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libcc1-0:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package libgomp1:arm64. 402s Preparing to unpack .../012-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package libitm1:arm64. 402s Preparing to unpack .../013-libitm1_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libitm1:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package libasan8:arm64. 402s Preparing to unpack .../014-libasan8_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libasan8:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package liblsan0:arm64. 402s Preparing to unpack .../015-liblsan0_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking liblsan0:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package libtsan2:arm64. 402s Preparing to unpack .../016-libtsan2_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libtsan2:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package libubsan1:arm64. 402s Preparing to unpack .../017-libubsan1_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libubsan1:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package libhwasan0:arm64. 402s Preparing to unpack .../018-libhwasan0_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libhwasan0:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package libgcc-15-dev:arm64. 402s Preparing to unpack .../019-libgcc-15-dev_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 402s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 402s Preparing to unpack .../020-gcc-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 402s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 403s Selecting previously unselected package gcc-15. 403s Preparing to unpack .../021-gcc-15_15.2.0-12ubuntu1_arm64.deb ... 403s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 403s Selecting previously unselected package gcc-aarch64-linux-gnu. 403s Preparing to unpack .../022-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 403s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 403s Selecting previously unselected package gcc. 403s Preparing to unpack .../023-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 403s Unpacking gcc (4:15.2.0-4ubuntu1) ... 403s Selecting previously unselected package libstdc++-15-dev:arm64. 403s Preparing to unpack .../024-libstdc++-15-dev_15.2.0-12ubuntu1_arm64.deb ... 403s Unpacking libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 403s Selecting previously unselected package g++-15-aarch64-linux-gnu. 403s Preparing to unpack .../025-g++-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 403s Unpacking g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 403s Selecting previously unselected package g++-15. 403s Preparing to unpack .../026-g++-15_15.2.0-12ubuntu1_arm64.deb ... 403s Unpacking g++-15 (15.2.0-12ubuntu1) ... 403s Selecting previously unselected package g++-aarch64-linux-gnu. 403s Preparing to unpack .../027-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 403s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 403s Selecting previously unselected package g++. 403s Preparing to unpack .../028-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 403s Unpacking g++ (4:15.2.0-4ubuntu1) ... 403s Selecting previously unselected package build-essential. 403s Preparing to unpack .../029-build-essential_12.12ubuntu2_arm64.deb ... 403s Unpacking build-essential (12.12ubuntu2) ... 403s Selecting previously unselected package dctrl-tools. 404s Preparing to unpack .../030-dctrl-tools_2.24-3build4_arm64.deb ... 404s Unpacking dctrl-tools (2.24-3build4) ... 404s Selecting previously unselected package fonts-dejavu-mono. 404s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8build1_all.deb ... 404s Unpacking fonts-dejavu-mono (2.37-8build1) ... 404s Selecting previously unselected package fonts-dejavu-core. 404s Preparing to unpack .../032-fonts-dejavu-core_2.37-8build1_all.deb ... 404s Unpacking fonts-dejavu-core (2.37-8build1) ... 404s Selecting previously unselected package fontconfig-config. 404s Preparing to unpack .../033-fontconfig-config_2.17.1-3ubuntu1_arm64.deb ... 404s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 404s Selecting previously unselected package libfontconfig1:arm64. 404s Preparing to unpack .../034-libfontconfig1_2.17.1-3ubuntu1_arm64.deb ... 404s Unpacking libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 404s Selecting previously unselected package fontconfig. 404s Preparing to unpack .../035-fontconfig_2.17.1-3ubuntu1_arm64.deb ... 404s Unpacking fontconfig (2.17.1-3ubuntu1) ... 404s Selecting previously unselected package libgfortran5:arm64. 404s Preparing to unpack .../036-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 404s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 404s Selecting previously unselected package libgfortran-15-dev:arm64. 404s Preparing to unpack .../037-libgfortran-15-dev_15.2.0-12ubuntu1_arm64.deb ... 404s Unpacking libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 404s Selecting previously unselected package gfortran-15-aarch64-linux-gnu. 404s Preparing to unpack .../038-gfortran-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 404s Unpacking gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 404s Selecting previously unselected package gfortran-15. 404s Preparing to unpack .../039-gfortran-15_15.2.0-12ubuntu1_arm64.deb ... 404s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 404s Selecting previously unselected package gfortran-aarch64-linux-gnu. 404s Preparing to unpack .../040-gfortran-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 404s Unpacking gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 404s Selecting previously unselected package gfortran. 404s Preparing to unpack .../041-gfortran_4%3a15.2.0-4ubuntu1_arm64.deb ... 404s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 404s Selecting previously unselected package icu-devtools. 404s Preparing to unpack .../042-icu-devtools_78.2-1ubuntu1_arm64.deb ... 404s Unpacking icu-devtools (78.2-1ubuntu1) ... 404s Selecting previously unselected package libblas3:arm64. 405s Preparing to unpack .../043-libblas3_3.12.1-7ubuntu1_arm64.deb ... 405s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 405s Selecting previously unselected package libblas-dev:arm64. 405s Preparing to unpack .../044-libblas-dev_3.12.1-7ubuntu1_arm64.deb ... 405s Unpacking libblas-dev:arm64 (3.12.1-7ubuntu1) ... 405s Selecting previously unselected package libbz2-dev:arm64. 405s Preparing to unpack .../045-libbz2-dev_1.0.8-6build2_arm64.deb ... 405s Unpacking libbz2-dev:arm64 (1.0.8-6build2) ... 405s Selecting previously unselected package libpixman-1-0:arm64. 405s Preparing to unpack .../046-libpixman-1-0_0.46.4-1_arm64.deb ... 405s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 405s Selecting previously unselected package libxcb-render0:arm64. 405s Preparing to unpack .../047-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 405s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 405s Selecting previously unselected package libxcb-shm0:arm64. 405s Preparing to unpack .../048-libxcb-shm0_1.17.0-2ubuntu1_arm64.deb ... 405s Unpacking libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 405s Selecting previously unselected package libxrender1:arm64. 405s Preparing to unpack .../049-libxrender1_1%3a0.9.12-1_arm64.deb ... 405s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 405s Selecting previously unselected package libcairo2:arm64. 405s Preparing to unpack .../050-libcairo2_1.18.4-3_arm64.deb ... 405s Unpacking libcairo2:arm64 (1.18.4-3) ... 405s Selecting previously unselected package libdatrie1:arm64. 405s Preparing to unpack .../051-libdatrie1_0.2.14-1_arm64.deb ... 405s Unpacking libdatrie1:arm64 (0.2.14-1) ... 405s Selecting previously unselected package libdeflate0:arm64. 405s Preparing to unpack .../052-libdeflate0_1.23-2build1_arm64.deb ... 405s Unpacking libdeflate0:arm64 (1.23-2build1) ... 405s Selecting previously unselected package libdeflate-dev:arm64. 405s Preparing to unpack .../053-libdeflate-dev_1.23-2build1_arm64.deb ... 405s Unpacking libdeflate-dev:arm64 (1.23-2build1) ... 405s Selecting previously unselected package libgraphite2-3:arm64. 405s Preparing to unpack .../054-libgraphite2-3_1.3.14-11ubuntu1_arm64.deb ... 405s Unpacking libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 405s Selecting previously unselected package libharfbuzz0b:arm64. 405s Preparing to unpack .../055-libharfbuzz0b_12.3.2-1_arm64.deb ... 405s Unpacking libharfbuzz0b:arm64 (12.3.2-1) ... 405s Selecting previously unselected package x11-common. 405s Preparing to unpack .../056-x11-common_1%3a7.7+24ubuntu1_all.deb ... 405s Unpacking x11-common (1:7.7+24ubuntu1) ... 405s Selecting previously unselected package libice6:arm64. 405s Preparing to unpack .../057-libice6_2%3a1.1.1-1build1_arm64.deb ... 405s Unpacking libice6:arm64 (2:1.1.1-1build1) ... 405s Selecting previously unselected package libicu-dev:arm64. 405s Preparing to unpack .../058-libicu-dev_78.2-1ubuntu1_arm64.deb ... 405s Unpacking libicu-dev:arm64 (78.2-1ubuntu1) ... 405s Selecting previously unselected package libjpeg-turbo8:arm64. 405s Preparing to unpack .../059-libjpeg-turbo8_2.1.5-4ubuntu3_arm64.deb ... 405s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu3) ... 405s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 405s Preparing to unpack .../060-libjpeg-turbo8-dev_2.1.5-4ubuntu3_arm64.deb ... 405s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu3) ... 405s Selecting previously unselected package libjpeg8:arm64. 405s Preparing to unpack .../061-libjpeg8_8c-2ubuntu11_arm64.deb ... 405s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 406s Selecting previously unselected package libjpeg8-dev:arm64. 406s Preparing to unpack .../062-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 406s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 406s Selecting previously unselected package libjpeg-dev:arm64. 406s Preparing to unpack .../063-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 406s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 406s Selecting previously unselected package liblapack3:arm64. 406s Preparing to unpack .../064-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 406s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 406s Selecting previously unselected package liblapack-dev:arm64. 406s Preparing to unpack .../065-liblapack-dev_3.12.1-7ubuntu1_arm64.deb ... 406s Unpacking liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 406s Selecting previously unselected package liblerc4:arm64. 406s Preparing to unpack .../066-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 406s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 406s Selecting previously unselected package libncurses-dev:arm64. 406s Preparing to unpack .../067-libncurses-dev_6.6+20251231-1_arm64.deb ... 406s Unpacking libncurses-dev:arm64 (6.6+20251231-1) ... 406s Selecting previously unselected package libthai-data. 406s Preparing to unpack .../068-libthai-data_0.1.30-1_all.deb ... 406s Unpacking libthai-data (0.1.30-1) ... 406s Selecting previously unselected package libthai0:arm64. 406s Preparing to unpack .../069-libthai0_0.1.30-1_arm64.deb ... 406s Unpacking libthai0:arm64 (0.1.30-1) ... 406s Selecting previously unselected package libpango-1.0-0:arm64. 406s Preparing to unpack .../070-libpango-1.0-0_1.57.0-1_arm64.deb ... 406s Unpacking libpango-1.0-0:arm64 (1.57.0-1) ... 406s Selecting previously unselected package libpangoft2-1.0-0:arm64. 406s Preparing to unpack .../071-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 406s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 406s Selecting previously unselected package libpangocairo-1.0-0:arm64. 406s Preparing to unpack .../072-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 406s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 406s Selecting previously unselected package libpaper2:arm64. 406s Preparing to unpack .../073-libpaper2_2.2.5-0.3build1_arm64.deb ... 406s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 406s Selecting previously unselected package libpaper-utils. 406s Preparing to unpack .../074-libpaper-utils_2.2.5-0.3build1_arm64.deb ... 406s Unpacking libpaper-utils (2.2.5-0.3build1) ... 406s Selecting previously unselected package libpcre2-16-0:arm64. 406s Preparing to unpack .../075-libpcre2-16-0_10.46-1_arm64.deb ... 406s Unpacking libpcre2-16-0:arm64 (10.46-1) ... 406s Selecting previously unselected package libpcre2-32-0:arm64. 406s Preparing to unpack .../076-libpcre2-32-0_10.46-1_arm64.deb ... 406s Unpacking libpcre2-32-0:arm64 (10.46-1) ... 406s Selecting previously unselected package libpcre2-posix3:arm64. 406s Preparing to unpack .../077-libpcre2-posix3_10.46-1_arm64.deb ... 406s Unpacking libpcre2-posix3:arm64 (10.46-1) ... 406s Selecting previously unselected package libpcre2-dev:arm64. 406s Preparing to unpack .../078-libpcre2-dev_10.46-1_arm64.deb ... 406s Unpacking libpcre2-dev:arm64 (10.46-1) ... 406s Selecting previously unselected package libpkgconf3:arm64. 406s Preparing to unpack .../079-libpkgconf3_1.8.1-4build1_arm64.deb ... 406s Unpacking libpkgconf3:arm64 (1.8.1-4build1) ... 406s Selecting previously unselected package zlib1g-dev:arm64. 406s Preparing to unpack .../080-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 406s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 406s Selecting previously unselected package libpng-dev:arm64. 407s Preparing to unpack .../081-libpng-dev_1.6.54-1_arm64.deb ... 407s Unpacking libpng-dev:arm64 (1.6.54-1) ... 407s Selecting previously unselected package libreadline-dev:arm64. 407s Preparing to unpack .../082-libreadline-dev_8.3-3_arm64.deb ... 407s Unpacking libreadline-dev:arm64 (8.3-3) ... 407s Selecting previously unselected package libsharpyuv0:arm64. 407s Preparing to unpack .../083-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 407s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 407s Selecting previously unselected package libsm6:arm64. 407s Preparing to unpack .../084-libsm6_2%3a1.2.6-1build1_arm64.deb ... 407s Unpacking libsm6:arm64 (2:1.2.6-1build1) ... 407s Selecting previously unselected package 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xdg-utils. 407s Preparing to unpack .../096-xdg-utils_1.2.1-2ubuntu2_all.deb ... 407s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 407s Selecting previously unselected package r-base-core. 407s Preparing to unpack .../097-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 407s Unpacking r-base-core (4.5.2-1ubuntu2) ... 408s Selecting previously unselected package liblzma-dev:arm64. 408s Preparing to unpack .../098-liblzma-dev_5.8.2-2_arm64.deb ... 408s Unpacking liblzma-dev:arm64 (5.8.2-2) ... 408s Selecting previously unselected package pkgconf-bin. 408s Preparing to unpack .../099-pkgconf-bin_1.8.1-4build1_arm64.deb ... 408s Unpacking pkgconf-bin (1.8.1-4build1) ... 408s Selecting previously unselected package pkgconf:arm64. 408s Preparing to unpack .../100-pkgconf_1.8.1-4build1_arm64.deb ... 408s Unpacking pkgconf:arm64 (1.8.1-4build1) ... 408s Selecting previously unselected package libtirpc-dev:arm64. 408s Preparing to unpack .../101-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 408s Unpacking 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409s Setting up libcc1-0:arm64 (15.2.0-12ubuntu1) ... 409s Setting up liblsan0:arm64 (15.2.0-12ubuntu1) ... 409s Setting up libblas-dev:arm64 (3.12.1-7ubuntu1) ... 409s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 409s Setting up dctrl-tools (2.24-3build4) ... 409s Setting up libitm1:arm64 (15.2.0-12ubuntu1) ... 409s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 409s Setting up cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 409s Setting up libice6:arm64 (2:1.1.1-1build1) ... 409s Setting up liblapack3:arm64 (3.12.1-7ubuntu1) ... 409s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 409s Setting up libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 409s Setting up fontconfig-config (2.17.1-3ubuntu1) ... 409s Setting up libpaper-utils (2.2.5-0.3build1) ... 409s Setting up libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 409s Setting up pkgconf:arm64 (1.8.1-4build1) ... 409s Setting up libthai0:arm64 (0.1.30-1) ... 409s Setting up cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 409s Setting up liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 409s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 409s Setting up cpp-15 (15.2.0-12ubuntu1) ... 409s Setting up libtiff6:arm64 (4.7.0-3ubuntu3) ... 409s Setting up cpp (4:15.2.0-4ubuntu1) ... 409s Setting up libc6-dev:arm64 (2.42-2ubuntu4) ... 409s Setting up libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 409s Setting up libsm6:arm64 (2:1.2.6-1build1) ... 409s Setting up libicu-dev:arm64 (78.2-1ubuntu1) ... 409s Setting up libbz2-dev:arm64 (1.0.8-6build2) ... 409s Setting up fontconfig (2.17.1-3ubuntu1) ... 411s Regenerating fonts cache... done. 411s Setting up libjpeg-turbo8-dev:arm64 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... 411s Setting up libpangocairo-1.0-0:arm64 (1.57.0-1) ... 411s Setting up gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 411s Setting up libpng-dev:arm64 (1.6.54-1) ... 411s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 411s Setting up gcc (4:15.2.0-4ubuntu1) ... 411s Setting up r-base-core (4.5.2-1ubuntu2) ... 411s Creating config file /etc/R/Renviron with new version 411s Setting up r-cran-lattice (0.22-9-1) ... 411s Setting up g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 411s Setting up gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 411s Setting up r-bioc-biocgenerics (0.52.0-2) ... 411s Setting up gfortran (4:15.2.0-4ubuntu1) ... 411s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 411s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 411s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 411s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 411s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 411s Setting up r-bioc-hilbertvis (1.64.0-2) ... 411s Setting up g++ (4:15.2.0-4ubuntu1) ... 411s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 411s Setting up build-essential (12.12ubuntu2) ... 411s Setting up r-bioc-iranges (2.40.1-3) ... 411s Setting up r-base-dev (4.5.2-1ubuntu2) ... 411s Setting up pkg-r-autopkgtest (20250812) ... 411s Processing triggers for libc-bin (2.42-2ubuntu4) ... 411s Processing triggers for man-db (2.13.1-1build1) ... 412s Processing triggers for install-info (7.2-5) ... 413s autopkgtest [22:53:24]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 413s autopkgtest [22:53:24]: test pkg-r-autopkgtest: [----------------------- 413s Test: Try to load the R library HilbertVis 414s 414s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 414s Copyright (C) 2025 The R Foundation for Statistical Computing 414s Platform: aarch64-unknown-linux-gnu 414s 414s R is free software and comes with ABSOLUTELY NO WARRANTY. 414s You are welcome to redistribute it under certain conditions. 414s Type 'license()' or 'licence()' for distribution details. 414s 414s R is a collaborative project with many contributors. 414s Type 'contributors()' for more information and 414s 'citation()' on how to cite R or R packages in publications. 414s 414s Type 'demo()' for some demos, 'help()' for on-line help, or 414s 'help.start()' for an HTML browser interface to help. 414s Type 'q()' to quit R. 414s 414s > library('HilbertVis') 414s Loading required package: grid 414s Loading required package: lattice 414s > 414s find: ‘tests’: No such file or directory 414s autopkgtest [22:53:25]: test pkg-r-autopkgtest: -----------------------] 414s autopkgtest [22:53:25]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 414s pkg-r-autopkgtest PASS 415s autopkgtest [22:53:26]: @@@@@@@@@@@@@@@@@@@@ summary 415s pkg-r-autopkgtest PASS