0s autopkgtest [23:17:46]: starting date and time: 2026-02-09 23:17:46+0000 0s autopkgtest [23:17:46]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [23:17:46]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0s465bol/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-ggbio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-arm64-7.secgroup --name adt-resolute-arm64-r-bioc-ggbio-20260209-231745-juju-7f2275-prod-proposed-migration-environment-2-7010aa28-c1db-40d5-a856-a0eab51d30bf --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-arm64-r-bioc-ggbio-20260209-231745-juju-7f2275-prod-proposed-migration-environment-2-7010aa28-c1db-40d5-a856-a0eab51d30bf from image adt/ubuntu-resolute-arm64-server-20260209.img (UUID 793037ca-75af-461b-82de-f8081300b2e3)... 122s autopkgtest [23:19:48]: testbed dpkg architecture: arm64 123s autopkgtest [23:19:49]: testbed apt version: 3.1.15 123s autopkgtest [23:19:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 123s autopkgtest [23:19:49]: testbed release detected to be: None 124s autopkgtest [23:19:50]: updating testbed package index (apt update) 124s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 124s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 124s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 124s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 124s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB] 124s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [176 kB] 124s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1645 kB] 129s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [246 kB] 129s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [6216 B] 129s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [304 B] 129s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [1580 kB] 133s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [32.0 kB] 133s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [21.7 kB] 133s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [688 B] 134s Fetched 3862 kB in 9s (439 kB/s) 135s Reading package lists... 136s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 136s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 136s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 136s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 137s Reading package lists... 137s Reading package lists... 137s Building dependency tree... 137s Reading state information... 138s Calculating upgrade... 138s The following packages will be upgraded: 138s cryptsetup-bin dracut-install iproute2 iptables libcryptsetup12 libip4tc2 138s libip6tc2 libxtables12 wget 138s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 138s Need to get 2534 kB of archives. 138s After this operation, 18.4 kB of additional disk space will be used. 138s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 iptables arm64 1.8.11-2ubuntu3 [386 kB] 138s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libip4tc2 arm64 1.8.11-2ubuntu3 [24.3 kB] 138s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libip6tc2 arm64 1.8.11-2ubuntu3 [24.7 kB] 138s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libxtables12 arm64 1.8.11-2ubuntu3 [36.7 kB] 138s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 iproute2 arm64 6.18.0-1ubuntu1 [1171 kB] 140s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libcryptsetup12 arm64 2:2.8.0-1ubuntu3 [274 kB] 140s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 wget arm64 1.25.0-2ubuntu4 [344 kB] 140s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cryptsetup-bin arm64 2:2.8.0-1ubuntu3 [227 kB] 140s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 dracut-install arm64 109-11ubuntu1 [45.3 kB] 140s dpkg-preconfigure: unable to re-open stdin: No such file or directory 140s Fetched 2534 kB in 2s (1279 kB/s) 141s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136597 files and directories currently installed.) 141s Preparing to unpack .../0-iptables_1.8.11-2ubuntu3_arm64.deb ... 141s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 141s Preparing to unpack .../1-libip4tc2_1.8.11-2ubuntu3_arm64.deb ... 141s Unpacking libip4tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 141s Preparing to unpack .../2-libip6tc2_1.8.11-2ubuntu3_arm64.deb ... 141s Unpacking libip6tc2:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 141s Preparing to unpack .../3-libxtables12_1.8.11-2ubuntu3_arm64.deb ... 141s Unpacking libxtables12:arm64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 141s Preparing to unpack .../4-iproute2_6.18.0-1ubuntu1_arm64.deb ... 141s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ... 141s Preparing to unpack .../5-libcryptsetup12_2%3a2.8.0-1ubuntu3_arm64.deb ... 141s Unpacking libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 141s Preparing to unpack .../6-wget_1.25.0-2ubuntu4_arm64.deb ... 141s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ... 141s Preparing to unpack .../7-cryptsetup-bin_2%3a2.8.0-1ubuntu3_arm64.deb ... 141s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ... 142s Preparing to unpack .../8-dracut-install_109-11ubuntu1_arm64.deb ... 142s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ... 142s Setting up libip4tc2:arm64 (1.8.11-2ubuntu3) ... 142s Setting up wget (1.25.0-2ubuntu4) ... 142s Setting up libip6tc2:arm64 (1.8.11-2ubuntu3) ... 142s Setting up libxtables12:arm64 (1.8.11-2ubuntu3) ... 142s Setting up dracut-install (109-11ubuntu1) ... 142s Setting up libcryptsetup12:arm64 (2:2.8.0-1ubuntu3) ... 142s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 142s Setting up iptables (1.8.11-2ubuntu3) ... 142s Setting up iproute2 (6.18.0-1ubuntu1) ... 142s Processing triggers for man-db (2.13.1-1build1) ... 143s Processing triggers for install-info (7.2-5) ... 143s Processing triggers for libc-bin (2.42-2ubuntu4) ... 143s autopkgtest [23:20:09]: upgrading testbed (apt dist-upgrade and autopurge) 143s Reading package lists... 144s Building dependency tree... 144s Reading state information... 144s Calculating upgrade... 144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s Reading package lists... 145s Building dependency tree... 145s Reading state information... 145s Solving dependencies... 145s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 148s autopkgtest [23:20:14]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 19:46:27 UTC 2026 148s autopkgtest [23:20:14]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-ggbio 158s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-ggbio 1.54.0-2 (dsc) [2563 B] 158s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-ggbio 1.54.0-2 (tar) [3251 kB] 158s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-ggbio 1.54.0-2 (diff) [5724 B] 158s gpgv: Signature made Tue Jan 14 10:25:42 2025 UTC 158s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 158s gpgv: issuer "crusoe@debian.org" 158s gpgv: Can't check signature: No public key 158s dpkg-source: warning: cannot verify inline signature for ./r-bioc-ggbio_1.54.0-2.dsc: no acceptable signature found 158s autopkgtest [23:20:24]: testing package r-bioc-ggbio version 1.54.0-2 159s autopkgtest [23:20:25]: build not needed 163s autopkgtest [23:20:29]: test pkg-r-autopkgtest: preparing testbed 163s Reading package lists... 164s Building dependency tree... 164s Reading state information... 164s Solving dependencies... 164s The following NEW packages will be installed: 164s build-essential cpp cpp-15 cpp-15-aarch64-linux-gnu cpp-aarch64-linux-gnu 164s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 164s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 164s g++ g++-15 g++-15-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-15 164s gcc-15-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-15 164s gfortran-15-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 164s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 164s libboost-dev libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 164s libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 164s libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 libgraphite2-3 164s libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl libisl23 164s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 164s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 164s libjs-highlight.js libjs-jquery libjs-jquery-datatables 164s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 164s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 164s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 164s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 164s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev 164s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 164s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 164s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libreadline-dev 164s libsharpyuv0 libsm6 libstdc++-15-dev libsynctex2 libtcl8.6 libteckit0 164s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 164s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 164s libxpm4 libxrender1 libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 164s linux-libc-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 164s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 164s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 164s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 164s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 164s r-bioc-biovizbase r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb 164s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 164s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-ggbio r-bioc-graph 164s r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics r-bioc-organismdbi 164s r-bioc-protgenerics r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 164s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 164s r-bioc-summarizedexperiment r-bioc-txdbmaker r-bioc-ucsc.utils 164s r-bioc-variantannotation r-bioc-xvector r-bioc-zlibbioc r-cran-abind 164s r-cran-acepack r-cran-askpass r-cran-backports r-cran-base64enc r-cran-bh 164s r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob 164s r-cran-bookdown r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr 164s r-cran-checkmate r-cran-chron r-cran-cli r-cran-cluster r-cran-codetools 164s r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 164s r-cran-data.table r-cran-dbi r-cran-dbplyr r-cran-deldir r-cran-desc 164s r-cran-dichromat r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-ellipsis 164s r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock 164s r-cran-fontawesome r-cran-forcats r-cran-foreign r-cran-formatr 164s r-cran-formula r-cran-fs r-cran-futile.logger r-cran-futile.options 164s r-cran-generics r-cran-ggally r-cran-ggplot2 r-cran-ggstats r-cran-glue 164s r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hmisc r-cran-hms 164s r-cran-htmltable r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv 164s r-cran-httr r-cran-httr2 r-cran-interp r-cran-isoband r-cran-jpeg 164s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 164s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 164s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 164s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-nnet 164s r-cran-openssl r-cran-patchwork r-cran-pillar r-cran-pkgbuild 164s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr 164s r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 164s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 164s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 164s r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 164s r-cran-rpart r-cran-rprojroot r-cran-rsqlite r-cran-rstudioapi r-cran-s7 164s r-cran-sass r-cran-scales r-cran-shiny r-cran-snow r-cran-sourcetools 164s r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys r-cran-testthat 164s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 164s r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr 164s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 164s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 164s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 164s 0 upgraded, 340 newly installed, 0 to remove and 0 not upgraded. 164s Need to get 502 MB of archives. 164s After this operation, 1497 MB of additional disk space will be used. 164s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libc-dev-bin arm64 2.42-2ubuntu4 [22.5 kB] 164s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 linux-libc-dev arm64 6.19.0-3.3 [1819 kB] 169s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libcrypt-dev arm64 1:4.5.1-1 [123 kB] 169s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 rpcsvc-proto arm64 1.4.3-1build1 [65.6 kB] 169s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 libc6-dev arm64 2.42-2ubuntu4 [1765 kB] 171s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1build1 [676 kB] 172s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-2 [55.6 kB] 172s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [11.7 MB] 192s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-12ubuntu1 [1030 B] 192s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 192s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 192s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-12ubuntu1 [49.0 kB] 192s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 192s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-12ubuntu1 [27.8 kB] 192s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-12ubuntu1 [2920 kB] 196s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-12ubuntu1 [1316 kB] 199s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-12ubuntu1 [2688 kB] 203s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-12ubuntu1 [1175 kB] 205s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-12ubuntu1 [1638 kB] 208s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-12ubuntu1 [2600 kB] 212s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [23.1 MB] 253s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-12ubuntu1 [519 kB] 253s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 253s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 253s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-12ubuntu1 [2549 kB] 259s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [13.2 MB] 285s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-12ubuntu1 [25.3 kB] 285s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 286s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 286s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu2 [5254 B] 286s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 dctrl-tools arm64 2.24-3build4 [102 kB] 286s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 286s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-dejavu-core all 2.37-8build1 [834 kB] 288s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.17.1-3ubuntu1 [38.5 kB] 288s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.17.1-3ubuntu1 [144 kB] 288s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig arm64 2.17.1-3ubuntu1 [181 kB] 288s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 289s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 289s Get:39 http://ftpmaster.internal/ubuntu resolute/universe arm64 fonts-lmodern all 2.005-1build1 [4788 kB] 298s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 303s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 303s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran-15-dev arm64 15.2.0-12ubuntu1 [490 kB] 304s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-12ubuntu1 [12.5 MB] 337s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-15 arm64 15.2.0-12ubuntu1 [18.1 kB] 337s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1022 B] 337s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 gfortran arm64 4:15.2.0-4ubuntu1 [1160 B] 337s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 icu-devtools arm64 78.2-1ubuntu1 [207 kB] 337s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 javascript-common all 12+nmu1build1 [4864 B] 337s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 337s Get:50 http://ftpmaster.internal/ubuntu resolute/universe arm64 liblatex-tounicode-perl all 1.93-1 [29.2 kB] 337s Get:51 http://ftpmaster.internal/ubuntu resolute/universe arm64 libbibtex-parser-perl all 1.93+dfsg-1 [17.4 kB] 337s Get:52 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 337s Get:53 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas-dev arm64 3.12.1-7ubuntu1 [160 kB] 337s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost1.90-dev arm64 1.90.0-2ubuntu1 [11.5 MB] 358s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libboost-dev arm64 1.90.0.0ubuntu3 [4764 B] 358s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libbz2-dev arm64 1.0.8-6build2 [34.9 kB] 358s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.46.4-1 [204 kB] 358s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2ubuntu1 [16.4 kB] 358s Get:59 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2ubuntu1 [5938 B] 358s Get:60 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 358s Get:61 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-3 [556 kB] 359s Get:62 http://ftpmaster.internal/ubuntu resolute/main arm64 libdatrie1 arm64 0.2.14-1 [19.6 kB] 359s Get:63 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2build1 [46.8 kB] 359s Get:64 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate-dev arm64 1.23-2build1 [54.3 kB] 359s Get:65 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-11ubuntu1 [72.1 kB] 359s Get:66 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.3.2-1 [510 kB] 359s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 359s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 libice6 arm64 2:1.1.1-1build1 [43.0 kB] 359s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libicu-dev arm64 78.2-1ubuntu1 [12.5 MB] 379s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu3 [161 kB] 379s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu3 [301 kB] 380s Get:72 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 380s Get:73 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 380s Get:74 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 380s Get:75 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 380s Get:76 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 380s Get:77 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 381s Get:78 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-d3 all 3.5.17-4build1 [136 kB] 381s Get:79 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 381s Get:80 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 381s Get:81 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 381s Get:82 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 381s Get:83 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 381s Get:84 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 381s Get:85 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 381s Get:86 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 381s Get:87 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 381s Get:88 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 381s Get:89 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 381s Get:90 http://ftpmaster.internal/ubuntu resolute/universe arm64 libkpathsea6 arm64 2025.20250727.75242+ds-5build1 [65.4 kB] 382s Get:91 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 386s Get:92 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack-dev arm64 3.12.1-7ubuntu1 [4456 kB] 393s Get:93 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu2 [174 kB] 393s Get:94 http://ftpmaster.internal/ubuntu resolute/main arm64 liblua5.4-0 arm64 5.4.8-1 [171 kB] 393s Get:95 http://ftpmaster.internal/ubuntu resolute/universe arm64 libmpfi0 arm64 1.5.4+ds-4build1 [36.4 kB] 393s Get:96 http://ftpmaster.internal/ubuntu resolute/main arm64 libncurses-dev arm64 6.6+20251231-1 [391 kB] 393s Get:97 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai-data all 0.1.30-1 [155 kB] 393s Get:98 http://ftpmaster.internal/ubuntu resolute/main arm64 libthai0 arm64 0.1.30-1 [18.3 kB] 393s Get:99 http://ftpmaster.internal/ubuntu resolute/main arm64 libpango-1.0-0 arm64 1.57.0-1 [238 kB] 393s Get:100 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangoft2-1.0-0 arm64 1.57.0-1 [51.5 kB] 393s Get:101 http://ftpmaster.internal/ubuntu resolute/main arm64 libpangocairo-1.0-0 arm64 1.57.0-1 [27.9 kB] 393s Get:102 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper2 arm64 2.2.5-0.3build1 [17.3 kB] 393s Get:103 http://ftpmaster.internal/ubuntu resolute/main arm64 libpaper-utils arm64 2.2.5-0.3build1 [15.4 kB] 393s Get:104 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-16-0 arm64 10.46-1 [225 kB] 393s Get:105 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-32-0 arm64 10.46-1 [213 kB] 393s Get:106 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-posix3 arm64 10.46-1 [7300 B] 393s Get:107 http://ftpmaster.internal/ubuntu resolute/main arm64 libpcre2-dev arm64 10.46-1 [772 kB] 395s Get:108 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 395s Get:109 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 396s Get:110 http://ftpmaster.internal/ubuntu resolute/main arm64 libpng-dev arm64 1.6.54-1 [268 kB] 396s Get:111 http://ftpmaster.internal/ubuntu resolute/universe arm64 libpotrace0 arm64 1.16-2build2 [16.3 kB] 396s Get:112 http://ftpmaster.internal/ubuntu resolute/universe arm64 libptexenc1 arm64 2025.20250727.75242+ds-5build1 [46.2 kB] 396s Get:113 http://ftpmaster.internal/ubuntu resolute/main arm64 libreadline-dev arm64 8.3-3 [199 kB] 396s Get:114 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1build1 [16.7 kB] 396s Get:115 http://ftpmaster.internal/ubuntu resolute/main arm64 libsm6 arm64 2:1.2.6-1build1 [16.8 kB] 396s Get:116 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsynctex2 arm64 2025.20250727.75242+ds-5build1 [61.4 kB] 396s Get:117 http://ftpmaster.internal/ubuntu resolute/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1build1 [983 kB] 398s Get:118 http://ftpmaster.internal/ubuntu resolute/universe arm64 libteckit0 arm64 2.5.13+ds-1 [393 kB] 398s Get:119 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtexlua53-5 arm64 2025.20250727.75242+ds-5build1 [122 kB] 398s Get:120 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu3 [29.2 kB] 398s Get:121 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1build1 [205 kB] 398s Get:122 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 398s Get:123 http://ftpmaster.internal/ubuntu resolute/main arm64 libxft2 arm64 2.3.6-1build2 [43.2 kB] 398s Get:124 http://ftpmaster.internal/ubuntu resolute/main arm64 libxss1 arm64 1:1.2.3-1build4 [7102 B] 398s Get:125 http://ftpmaster.internal/ubuntu resolute/main arm64 libtk8.6 arm64 8.6.17-1 [811 kB] 400s Get:126 http://ftpmaster.internal/ubuntu resolute/main arm64 libxt6t64 arm64 1:1.2.1-1.3 [168 kB] 400s Get:127 http://ftpmaster.internal/ubuntu resolute/main arm64 libxmu6 arm64 2:1.1.3-4 [47.6 kB] 400s Get:128 http://ftpmaster.internal/ubuntu resolute/main arm64 libxpm4 arm64 1:3.5.17-1build3 [35.5 kB] 400s Get:129 http://ftpmaster.internal/ubuntu resolute/main arm64 libxaw7 arm64 2:1.0.16-1build1 [183 kB] 400s Get:130 http://ftpmaster.internal/ubuntu resolute/main arm64 libxi6 arm64 2:1.8.2-2 [32.4 kB] 400s Get:131 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-3 [349 kB] 400s Get:132 http://ftpmaster.internal/ubuntu resolute/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.2 [30.7 kB] 400s Get:133 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 400s Get:134 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 400s Get:135 http://ftpmaster.internal/ubuntu resolute/universe arm64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 400s Get:136 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 400s Get:137 http://ftpmaster.internal/ubuntu resolute/universe arm64 pandoc arm64 3.1.11.1+ds-4 [28.0 MB] 455s Get:138 http://ftpmaster.internal/ubuntu resolute/main arm64 zip arm64 3.0-15ubuntu3 [170 kB] 455s Get:139 http://ftpmaster.internal/ubuntu resolute/main arm64 unzip arm64 6.0-29ubuntu1 [176 kB] 455s Get:140 http://ftpmaster.internal/ubuntu resolute/main arm64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 455s Get:141 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-core arm64 4.5.2-1ubuntu2 [28.6 MB] 508s Get:142 http://ftpmaster.internal/ubuntu resolute/main arm64 liblzma-dev arm64 5.8.2-2 [180 kB] 508s Get:143 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 508s Get:144 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 508s Get:145 http://ftpmaster.internal/ubuntu resolute/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 508s Get:146 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 508s Get:147 http://ftpmaster.internal/ubuntu resolute/universe arm64 pkg-r-autopkgtest all 20250812 [6158 B] 508s Get:148 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 509s Get:149 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 513s Get:150 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 517s Get:151 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 521s Get:152 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbi all 1.2.3-1build1 [855 kB] 522s Get:153 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 522s Get:154 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bit64 arm64 4.6.0-1-4 [495 kB] 522s Get:155 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 525s Get:156 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 527s Get:157 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 527s Get:158 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 528s Get:159 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 530s Get:160 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-blob all 1.3.0-1 [54.1 kB] 530s Get:161 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 530s Get:162 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 530s Get:163 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 530s Get:164 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 530s Get:165 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plogr all 0.2.0-3build2 [15.8 kB] 530s Get:166 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cpp11 all 0.5.3-1 [242 kB] 530s Get:167 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rsqlite arm64 2.3.9-1 [1247 kB] 532s Get:168 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-curl arm64 7.0.0+dfsg-1 [202 kB] 532s Get:169 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 532s Get:170 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 532s Get:171 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 532s Get:172 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 532s Get:173 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 532s Get:174 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 532s Get:175 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 532s Get:176 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 532s Get:177 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 532s Get:178 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 533s Get:179 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 533s Get:180 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 558s Get:181 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 570s Get:182 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 570s Get:183 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 591s Get:184 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 591s Get:185 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 601s Get:186 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 607s Get:187 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lazyeval arm64 0.2.2-1build2 [145 kB] 607s Get:188 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB] 607s Get:189 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-generics all 0.1.4-1 [84.0 kB] 607s Get:190 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 607s Get:191 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 607s Get:192 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 607s Get:193 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fansi arm64 1.0.6-2 [627 kB] 610s Get:194 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 610s Get:195 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 610s Get:196 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 610s Get:197 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 614s Get:198 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 616s Get:199 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringi arm64 1.8.4-1build2 [901 kB] 619s Get:200 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 619s Get:201 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 622s Get:202 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dbplyr all 2.5.1+dfsg-1 [1237 kB] 626s Get:203 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 626s Get:204 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 626s Get:205 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 626s Get:206 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 626s Get:207 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lambda.r all 1.2.4-2build2 [118 kB] 626s Get:208 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB] 626s Get:209 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB] 626s Get:210 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB] 626s Get:211 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 626s Get:212 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 626s Get:213 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 630s Get:214 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-base64enc arm64 0.1-3-3build1 [28.5 kB] 630s Get:215 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-digest arm64 0.6.39-1 [196 kB] 630s Get:216 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 630s Get:217 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-evaluate all 1.0.5-1 [117 kB] 630s Get:218 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xfun arm64 0.55+dfsg-1 [587 kB] 631s Get:219 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 631s Get:220 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 632s Get:221 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 648s Get:222 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 650s Get:223 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 650s Get:224 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 650s Get:225 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rappdirs arm64 0.3.3-1build1 [49.5 kB] 650s Get:226 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 651s Get:227 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 659s Get:228 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 661s Get:229 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-tinytex all 0.58-1 [148 kB] 661s Get:230 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 661s Get:231 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-littler arm64 0.3.22-1 [85.1 kB] 661s Get:232 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 661s Get:233 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcpp arm64 1.1.0-1 [2011 kB] 664s Get:234 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 664s Get:235 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 664s Get:236 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 664s Get:237 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 665s Get:238 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 665s Get:239 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 665s Get:240 http://ftpmaster.internal/ubuntu resolute/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 665s Get:241 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 671s Get:242 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 673s Get:243 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 676s Get:244 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 676s Get:245 http://ftpmaster.internal/ubuntu resolute/universe arm64 tex-common all 6.20 [30.0 kB] 676s Get:246 http://ftpmaster.internal/ubuntu resolute/main arm64 t1utils arm64 1.41-4build4 [59.8 kB] 676s Get:247 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-binaries arm64 2025.20250727.75242+ds-5build1 [8302 kB] 691s Get:248 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-base all 2025.20260124-1 [22.8 MB] 738s Get:249 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-latex-base all 2025.20260124-1 [1321 kB] 741s Get:250 http://ftpmaster.internal/ubuntu resolute/universe arm64 texlive-bibtex-extra all 2025.20260124-1 [80.6 MB] 891s Get:251 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 891s Get:252 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 892s Get:253 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hms all 1.1.4-1 [102 kB] 892s Get:254 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 892s Get:255 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 892s Get:256 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-httr2 all 1.1.1-2 [752 kB] 893s Get:257 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xml2 arm64 1.4.1-1 [326 kB] 893s Get:258 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 893s Get:259 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-farver arm64 2.1.2-1 [1344 kB] 897s Get:260 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 897s Get:261 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 897s Get:262 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridislite all 0.4.3-1 [1088 kB] 899s Get:263 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-scales all 1.4.0-1 [725 kB] 901s Get:264 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 901s Get:265 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 903s Get:266 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-s7 arm64 0.2.0-1 [329 kB] 903s Get:267 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 913s Get:268 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-cluster arm64 2.1.8.2-1 [568 kB] 915s Get:269 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 922s Get:270 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrix arm64 1.7-4-1 [4146 kB] 930s Get:271 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-survival arm64 3.8-6-1 [8270 kB] 945s Get:272 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rpart arm64 4.1.24-1build1 [665 kB] 946s Get:273 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-nnet arm64 7.3-20-1 [113 kB] 946s Get:274 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-foreign arm64 0.8.91-1 [243 kB] 946s Get:275 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-gridextra all 2.3-3build2 [1032 kB] 949s Get:276 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-data.table arm64 1.17.0+dfsg-1 [2129 kB] 953s Get:277 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-backports arm64 1.5.0-2 [121 kB] 953s Get:278 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-checkmate arm64 2.3.2-1 [706 kB] 954s Get:279 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 954s Get:280 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rstudioapi all 0.18.0-1 [326 kB] 954s Get:281 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-htmltable all 2.4.3-1 [388 kB] 954s Get:282 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-colorspace arm64 2.1-1+dfsg-1 [1563 kB] 957s Get:283 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-formula all 1.2-5-1 [158 kB] 957s Get:284 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-chron arm64 2.3-62-1 [188 kB] 957s Get:285 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-jpeg arm64 0.1-10-1 [30.8 kB] 957s Get:286 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-deldir arm64 2.0-4-1build1 [270 kB] 957s Get:287 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcppeigen arm64 0.3.4.0.2-1 [1422 kB] 960s Get:288 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-interp arm64 1.1-6-1 [1433 kB] 962s Get:289 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-mass arm64 7.3-65-1 [1109 kB] 964s Get:290 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-latticeextra all 0.6-31-1 [2177 kB] 968s Get:291 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-acepack arm64 1.6.3-1 [84.3 kB] 968s Get:292 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 973s Get:293 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-hmisc arm64 5.2-5-2 [3610 kB] 979s Get:294 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-dichromat all 1:2.0-0.1-1 [148 kB] 979s Get:295 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 979s Get:296 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 979s Get:297 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 979s Get:298 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 980s Get:299 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-2 [1369 kB] 983s Get:300 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 986s Get:301 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 988s Get:302 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 988s Get:303 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 991s Get:304 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 997s Get:305 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 1005s Get:306 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-xml arm64 3.99-0.20-1 [1749 kB] 1008s Get:307 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 1010s Get:308 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 1010s Get:309 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 1010s Get:310 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rtracklayer arm64 1.66.0-3 [5216 kB] 1019s Get:311 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 1021s Get:312 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-bsgenome all 1.74.0-2 [7001 kB] 1032s Get:313 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-variantannotation arm64 1.52.0-2 [3592 kB] 1039s Get:314 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-protgenerics all 1.38.0-2 [239 kB] 1039s Get:315 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB] 1043s Get:316 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-biovizbase arm64 1.54.0-2 [2857 kB] 1053s Get:317 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-plyr arm64 1.8.9-1 [831 kB] 1055s Get:318 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-reshape2 arm64 1.4.4-2build2 [118 kB] 1056s Get:319 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-graph arm64 1.84.1-2 [1296 kB] 1060s Get:320 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-rbgl arm64 1.82.0+dfsg-2 [562 kB] 1061s Get:321 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-txdbmaker all 1.2.1+ds-2 [875 kB] 1063s Get:322 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-organismdbi all 1.48.0+dfsg-2 [452 kB] 1063s Get:323 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ellipsis arm64 0.3.2-2build1 [36.2 kB] 1063s Get:324 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-forcats all 1.0.1-1 [368 kB] 1063s Get:325 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-patchwork all 1.3.0-1 [3220 kB] 1074s Get:326 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggstats all 0.7.0-2 [1100 kB] 1081s Get:327 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ggally all 2.2.1-1 [2022 kB] 1084s Get:328 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-bioc-ggbio all 1.54.0-2 [2941 kB] 1092s Get:329 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-brio arm64 1.1.5-1 [39.1 kB] 1092s Get:330 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-ps arm64 1.9.0-1 [407 kB] 1092s Get:331 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-processx arm64 3.8.6-1 [363 kB] 1092s Get:332 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-callr all 3.7.6-1 [458 kB] 1092s Get:333 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-desc all 1.4.3-1 [359 kB] 1092s Get:334 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-diffobj arm64 0.3.5-1build1 [1154 kB] 1098s Get:335 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 1098s Get:336 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-rprojroot all 2.1.1-1 [131 kB] 1098s Get:337 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-pkgload all 1.4.1-1 [252 kB] 1098s Get:338 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 1098s Get:339 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-waldo all 0.6.2-1 [153 kB] 1098s Get:340 http://ftpmaster.internal/ubuntu resolute/universe arm64 r-cran-testthat arm64 3.2.3-1 [1644 kB] 1101s Preconfiguring packages ... 1102s Fetched 502 MB in 15min 37s (536 kB/s) 1102s Selecting previously unselected package libc-dev-bin. 1102s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 136600 files and directories currently installed.) 1102s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_arm64.deb ... 1102s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 1102s Selecting previously unselected package linux-libc-dev:arm64. 1102s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_arm64.deb ... 1102s Unpacking linux-libc-dev:arm64 (6.19.0-3.3) ... 1102s Selecting previously unselected package libcrypt-dev:arm64. 1102s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_arm64.deb ... 1102s Unpacking libcrypt-dev:arm64 (1:4.5.1-1) ... 1102s Selecting previously unselected package rpcsvc-proto. 1102s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_arm64.deb ... 1102s Unpacking rpcsvc-proto (1.4.3-1build1) ... 1102s Selecting previously unselected package libc6-dev:arm64. 1102s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_arm64.deb ... 1102s Unpacking libc6-dev:arm64 (2.42-2ubuntu4) ... 1102s Selecting previously unselected package libisl23:arm64. 1102s Preparing to unpack .../005-libisl23_0.27-1build1_arm64.deb ... 1102s Unpacking libisl23:arm64 (0.27-1build1) ... 1102s Selecting previously unselected package libmpc3:arm64. 1102s Preparing to unpack .../006-libmpc3_1.3.1-2_arm64.deb ... 1102s Unpacking libmpc3:arm64 (1.3.1-2) ... 1102s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 1102s Preparing to unpack .../007-cpp-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1102s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1102s Selecting previously unselected package cpp-15. 1102s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_arm64.deb ... 1102s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 1102s Selecting previously unselected package cpp-aarch64-linux-gnu. 1102s Preparing to unpack .../009-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1102s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1102s Selecting previously unselected package cpp. 1102s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 1102s Unpacking cpp (4:15.2.0-4ubuntu1) ... 1102s Selecting previously unselected package libcc1-0:arm64. 1102s Preparing to unpack .../011-libcc1-0_15.2.0-12ubuntu1_arm64.deb ... 1102s Unpacking libcc1-0:arm64 (15.2.0-12ubuntu1) ... 1102s Selecting previously unselected package libgomp1:arm64. 1102s Preparing to unpack .../012-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 1102s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 1102s Selecting previously unselected package libitm1:arm64. 1102s Preparing to unpack .../013-libitm1_15.2.0-12ubuntu1_arm64.deb ... 1102s Unpacking libitm1:arm64 (15.2.0-12ubuntu1) ... 1102s Selecting previously unselected package libasan8:arm64. 1103s Preparing to unpack .../014-libasan8_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking libasan8:arm64 (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package liblsan0:arm64. 1103s Preparing to unpack .../015-liblsan0_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking liblsan0:arm64 (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package libtsan2:arm64. 1103s Preparing to unpack .../016-libtsan2_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking libtsan2:arm64 (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package libubsan1:arm64. 1103s Preparing to unpack .../017-libubsan1_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking libubsan1:arm64 (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package libhwasan0:arm64. 1103s Preparing to unpack .../018-libhwasan0_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking libhwasan0:arm64 (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package libgcc-15-dev:arm64. 1103s Preparing to unpack .../019-libgcc-15-dev_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 1103s Preparing to unpack .../020-gcc-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package gcc-15. 1103s Preparing to unpack .../021-gcc-15_15.2.0-12ubuntu1_arm64.deb ... 1103s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 1103s Selecting previously unselected package gcc-aarch64-linux-gnu. 1103s Preparing to unpack .../022-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1103s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1103s Selecting previously unselected package gcc. 1103s Preparing to unpack .../023-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 1103s Unpacking gcc (4:15.2.0-4ubuntu1) ... 1103s Selecting previously unselected package libstdc++-15-dev:arm64. 1104s Preparing to unpack .../024-libstdc++-15-dev_15.2.0-12ubuntu1_arm64.deb ... 1104s Unpacking libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 1104s Selecting previously unselected package g++-15-aarch64-linux-gnu. 1104s Preparing to unpack .../025-g++-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1104s Unpacking g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1104s Selecting previously unselected package g++-15. 1104s Preparing to unpack .../026-g++-15_15.2.0-12ubuntu1_arm64.deb ... 1104s Unpacking g++-15 (15.2.0-12ubuntu1) ... 1104s Selecting previously unselected package g++-aarch64-linux-gnu. 1104s Preparing to unpack .../027-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1104s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1104s Selecting previously unselected package g++. 1104s Preparing to unpack .../028-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 1104s Unpacking g++ (4:15.2.0-4ubuntu1) ... 1104s Selecting previously unselected package build-essential. 1104s Preparing to unpack .../029-build-essential_12.12ubuntu2_arm64.deb ... 1104s Unpacking build-essential (12.12ubuntu2) ... 1104s Selecting previously unselected package dctrl-tools. 1104s Preparing to unpack .../030-dctrl-tools_2.24-3build4_arm64.deb ... 1104s Unpacking dctrl-tools (2.24-3build4) ... 1104s Selecting previously unselected package fonts-dejavu-mono. 1104s Preparing to unpack .../031-fonts-dejavu-mono_2.37-8build1_all.deb ... 1104s Unpacking fonts-dejavu-mono (2.37-8build1) ... 1104s Selecting previously unselected package fonts-dejavu-core. 1104s Preparing to unpack .../032-fonts-dejavu-core_2.37-8build1_all.deb ... 1104s Unpacking fonts-dejavu-core (2.37-8build1) ... 1104s Selecting previously unselected package fontconfig-config. 1104s Preparing to unpack .../033-fontconfig-config_2.17.1-3ubuntu1_arm64.deb ... 1104s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 1105s Selecting previously unselected package libfontconfig1:arm64. 1105s Preparing to unpack .../034-libfontconfig1_2.17.1-3ubuntu1_arm64.deb ... 1105s Unpacking libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 1105s Selecting previously unselected package fontconfig. 1105s Preparing to unpack .../035-fontconfig_2.17.1-3ubuntu1_arm64.deb ... 1105s Unpacking fontconfig (2.17.1-3ubuntu1) ... 1105s Selecting previously unselected package fonts-font-awesome. 1105s Preparing to unpack .../036-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 1105s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 1105s Selecting previously unselected package fonts-glyphicons-halflings. 1105s Preparing to unpack .../037-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 1105s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 1105s Selecting previously unselected package fonts-lmodern. 1105s Preparing to unpack .../038-fonts-lmodern_2.005-1build1_all.deb ... 1105s Unpacking fonts-lmodern (2.005-1build1) ... 1105s Selecting previously unselected package fonts-mathjax. 1105s Preparing to unpack .../039-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 1105s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 1105s Selecting previously unselected package libgfortran5:arm64. 1105s Preparing to unpack .../040-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 1105s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 1105s Selecting previously unselected package libgfortran-15-dev:arm64. 1105s Preparing to unpack .../041-libgfortran-15-dev_15.2.0-12ubuntu1_arm64.deb ... 1105s Unpacking libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 1105s Selecting previously unselected package gfortran-15-aarch64-linux-gnu. 1105s Preparing to unpack .../042-gfortran-15-aarch64-linux-gnu_15.2.0-12ubuntu1_arm64.deb ... 1105s Unpacking gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1105s Selecting previously unselected package gfortran-15. 1105s Preparing to unpack .../043-gfortran-15_15.2.0-12ubuntu1_arm64.deb ... 1105s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 1105s Selecting previously unselected package gfortran-aarch64-linux-gnu. 1105s Preparing to unpack .../044-gfortran-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 1105s Unpacking gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1105s Selecting previously unselected package gfortran. 1105s Preparing to unpack .../045-gfortran_4%3a15.2.0-4ubuntu1_arm64.deb ... 1105s Unpacking gfortran (4:15.2.0-4ubuntu1) ... 1105s Selecting previously unselected package icu-devtools. 1105s Preparing to unpack .../046-icu-devtools_78.2-1ubuntu1_arm64.deb ... 1105s Unpacking icu-devtools (78.2-1ubuntu1) ... 1105s Selecting previously unselected package javascript-common. 1105s Preparing to unpack .../047-javascript-common_12+nmu1build1_all.deb ... 1105s Unpacking javascript-common (12+nmu1build1) ... 1105s Selecting previously unselected package libio-string-perl. 1105s Preparing to unpack .../048-libio-string-perl_1.08-4_all.deb ... 1105s Unpacking libio-string-perl (1.08-4) ... 1105s Selecting previously unselected package liblatex-tounicode-perl. 1105s Preparing to unpack .../049-liblatex-tounicode-perl_1.93-1_all.deb ... 1105s Unpacking liblatex-tounicode-perl (1.93-1) ... 1105s Selecting previously unselected package libbibtex-parser-perl. 1105s Preparing to unpack .../050-libbibtex-parser-perl_1.93+dfsg-1_all.deb ... 1105s Unpacking libbibtex-parser-perl (1.93+dfsg-1) ... 1105s Selecting previously unselected package libblas3:arm64. 1106s Preparing to unpack .../051-libblas3_3.12.1-7ubuntu1_arm64.deb ... 1106s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 1106s Selecting previously unselected package libblas-dev:arm64. 1106s Preparing to unpack .../052-libblas-dev_3.12.1-7ubuntu1_arm64.deb ... 1106s Unpacking libblas-dev:arm64 (3.12.1-7ubuntu1) ... 1106s Selecting previously unselected package libboost1.90-dev:arm64. 1106s Preparing to unpack .../053-libboost1.90-dev_1.90.0-2ubuntu1_arm64.deb ... 1106s Unpacking libboost1.90-dev:arm64 (1.90.0-2ubuntu1) ... 1107s Selecting previously unselected package libboost-dev:arm64. 1107s Preparing to unpack .../054-libboost-dev_1.90.0.0ubuntu3_arm64.deb ... 1107s Unpacking libboost-dev:arm64 (1.90.0.0ubuntu3) ... 1107s Selecting previously unselected package libbz2-dev:arm64. 1107s Preparing to unpack .../055-libbz2-dev_1.0.8-6build2_arm64.deb ... 1107s Unpacking libbz2-dev:arm64 (1.0.8-6build2) ... 1107s Selecting previously unselected package libpixman-1-0:arm64. 1107s Preparing to unpack .../056-libpixman-1-0_0.46.4-1_arm64.deb ... 1107s Unpacking libpixman-1-0:arm64 (0.46.4-1) ... 1107s Selecting previously unselected package libxcb-render0:arm64. 1107s Preparing to unpack .../057-libxcb-render0_1.17.0-2ubuntu1_arm64.deb ... 1107s Unpacking libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 1107s Selecting previously unselected package libxcb-shm0:arm64. 1107s Preparing to unpack .../058-libxcb-shm0_1.17.0-2ubuntu1_arm64.deb ... 1107s Unpacking libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 1107s Selecting previously unselected package libxrender1:arm64. 1107s Preparing to unpack .../059-libxrender1_1%3a0.9.12-1_arm64.deb ... 1107s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 1107s Selecting previously unselected package libcairo2:arm64. 1107s Preparing to unpack .../060-libcairo2_1.18.4-3_arm64.deb ... 1107s Unpacking libcairo2:arm64 (1.18.4-3) ... 1107s Selecting previously unselected package libdatrie1:arm64. 1107s Preparing to unpack .../061-libdatrie1_0.2.14-1_arm64.deb ... 1107s Unpacking libdatrie1:arm64 (0.2.14-1) ... 1107s Selecting previously unselected package libdeflate0:arm64. 1107s Preparing to unpack .../062-libdeflate0_1.23-2build1_arm64.deb ... 1107s Unpacking libdeflate0:arm64 (1.23-2build1) ... 1107s Selecting previously unselected package libdeflate-dev:arm64. 1107s Preparing to unpack .../063-libdeflate-dev_1.23-2build1_arm64.deb ... 1107s Unpacking libdeflate-dev:arm64 (1.23-2build1) ... 1107s Selecting previously unselected package libgraphite2-3:arm64. 1107s Preparing to unpack .../064-libgraphite2-3_1.3.14-11ubuntu1_arm64.deb ... 1107s Unpacking libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 1107s Selecting previously unselected package libharfbuzz0b:arm64. 1107s Preparing to unpack .../065-libharfbuzz0b_12.3.2-1_arm64.deb ... 1107s Unpacking libharfbuzz0b:arm64 (12.3.2-1) ... 1107s Selecting previously unselected package x11-common. 1107s Preparing to unpack .../066-x11-common_1%3a7.7+24ubuntu1_all.deb ... 1107s Unpacking x11-common (1:7.7+24ubuntu1) ... 1108s Selecting previously unselected package libice6:arm64. 1108s Preparing to unpack .../067-libice6_2%3a1.1.1-1build1_arm64.deb ... 1108s Unpacking libice6:arm64 (2:1.1.1-1build1) ... 1108s Selecting previously unselected package libicu-dev:arm64. 1108s Preparing to unpack .../068-libicu-dev_78.2-1ubuntu1_arm64.deb ... 1108s Unpacking libicu-dev:arm64 (78.2-1ubuntu1) ... 1108s Selecting previously unselected package libjpeg-turbo8:arm64. 1108s Preparing to unpack .../069-libjpeg-turbo8_2.1.5-4ubuntu3_arm64.deb ... 1108s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu3) ... 1108s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 1108s Preparing to unpack .../070-libjpeg-turbo8-dev_2.1.5-4ubuntu3_arm64.deb ... 1108s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu3) ... 1108s Selecting previously unselected package libjpeg8:arm64. 1108s Preparing to unpack .../071-libjpeg8_8c-2ubuntu11_arm64.deb ... 1108s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 1108s Selecting previously unselected package libjpeg8-dev:arm64. 1108s Preparing to unpack .../072-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 1108s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1108s Selecting previously unselected package libjpeg-dev:arm64. 1108s Preparing to unpack .../073-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 1108s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 1108s Selecting previously unselected package libjs-bootstrap. 1108s Preparing to unpack .../074-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 1108s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 1108s Selecting previously unselected package libjs-popper.js. 1108s Preparing to unpack .../075-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 1108s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 1108s Selecting previously unselected package libjs-bootstrap4. 1108s Preparing to unpack .../076-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 1108s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 1108s Selecting previously unselected package libjs-d3. 1108s Preparing to unpack .../077-libjs-d3_3.5.17-4build1_all.deb ... 1108s Unpacking libjs-d3 (3.5.17-4build1) ... 1108s Selecting previously unselected package libjs-es5-shim. 1108s Preparing to unpack .../078-libjs-es5-shim_4.6.7-2_all.deb ... 1108s Unpacking libjs-es5-shim (4.6.7-2) ... 1108s Selecting previously unselected package libjs-highlight.js. 1108s Preparing to unpack .../079-libjs-highlight.js_10.7.3+dfsg-2_all.deb ... 1108s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ... 1108s Selecting previously unselected package libjs-jquery. 1108s Preparing to unpack .../080-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 1108s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 1108s Selecting previously unselected package libjs-jquery-datatables. 1109s Preparing to unpack .../081-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 1109s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 1109s Selecting previously unselected package libjs-sifter.js. 1109s Preparing to unpack .../082-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 1109s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 1109s Selecting previously unselected package libjs-microplugin.js. 1109s Preparing to unpack .../083-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ... 1109s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ... 1109s Selecting previously unselected package libjs-jquery-selectize.js. 1109s Preparing to unpack .../084-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 1109s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1109s Selecting previously unselected package libjs-jquery-ui. 1109s Preparing to unpack .../085-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 1109s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 1109s Selecting previously unselected package libjs-json. 1109s Preparing to unpack .../086-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 1109s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 1109s Selecting previously unselected package libjs-lunr. 1109s Preparing to unpack .../087-libjs-lunr_2.3.9~dfsg-2_all.deb ... 1109s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 1109s Selecting previously unselected package libjs-prettify. 1109s Preparing to unpack .../088-libjs-prettify_2015.12.04+dfsg-3_all.deb ... 1109s Unpacking libjs-prettify (2015.12.04+dfsg-3) ... 1109s Selecting previously unselected package libkpathsea6:arm64. 1109s Preparing to unpack .../089-libkpathsea6_2025.20250727.75242+ds-5build1_arm64.deb ... 1109s Unpacking libkpathsea6:arm64 (2025.20250727.75242+ds-5build1) ... 1109s Selecting previously unselected package liblapack3:arm64. 1109s Preparing to unpack .../090-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 1109s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 1109s Selecting previously unselected package liblapack-dev:arm64. 1109s Preparing to unpack .../091-liblapack-dev_3.12.1-7ubuntu1_arm64.deb ... 1109s Unpacking liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 1109s Selecting previously unselected package liblerc4:arm64. 1109s Preparing to unpack .../092-liblerc4_4.0.0+ds-5ubuntu2_arm64.deb ... 1109s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 1109s Selecting previously unselected package liblua5.4-0:arm64. 1109s Preparing to unpack .../093-liblua5.4-0_5.4.8-1_arm64.deb ... 1109s Unpacking liblua5.4-0:arm64 (5.4.8-1) ... 1109s Selecting previously unselected package libmpfi0:arm64. 1109s Preparing to unpack .../094-libmpfi0_1.5.4+ds-4build1_arm64.deb ... 1109s Unpacking libmpfi0:arm64 (1.5.4+ds-4build1) ... 1109s Selecting previously unselected package libncurses-dev:arm64. 1109s Preparing to unpack .../095-libncurses-dev_6.6+20251231-1_arm64.deb ... 1109s Unpacking libncurses-dev:arm64 (6.6+20251231-1) ... 1109s Selecting previously unselected package libthai-data. 1109s Preparing to unpack .../096-libthai-data_0.1.30-1_all.deb ... 1109s Unpacking libthai-data (0.1.30-1) ... 1109s Selecting previously unselected package libthai0:arm64. 1109s Preparing to unpack .../097-libthai0_0.1.30-1_arm64.deb ... 1109s Unpacking libthai0:arm64 (0.1.30-1) ... 1109s Selecting previously unselected package libpango-1.0-0:arm64. 1109s Preparing to unpack .../098-libpango-1.0-0_1.57.0-1_arm64.deb ... 1109s Unpacking libpango-1.0-0:arm64 (1.57.0-1) ... 1110s Selecting previously unselected package libpangoft2-1.0-0:arm64. 1110s Preparing to unpack .../099-libpangoft2-1.0-0_1.57.0-1_arm64.deb ... 1110s Unpacking libpangoft2-1.0-0:arm64 (1.57.0-1) ... 1110s Selecting previously unselected package libpangocairo-1.0-0:arm64. 1110s Preparing to unpack .../100-libpangocairo-1.0-0_1.57.0-1_arm64.deb ... 1110s Unpacking libpangocairo-1.0-0:arm64 (1.57.0-1) ... 1110s Selecting previously unselected package libpaper2:arm64. 1110s Preparing to unpack .../101-libpaper2_2.2.5-0.3build1_arm64.deb ... 1110s Unpacking libpaper2:arm64 (2.2.5-0.3build1) ... 1110s Selecting previously unselected package libpaper-utils. 1110s Preparing to unpack .../102-libpaper-utils_2.2.5-0.3build1_arm64.deb ... 1110s Unpacking libpaper-utils (2.2.5-0.3build1) ... 1110s Selecting previously unselected package libpcre2-16-0:arm64. 1110s Preparing to unpack .../103-libpcre2-16-0_10.46-1_arm64.deb ... 1110s Unpacking libpcre2-16-0:arm64 (10.46-1) ... 1110s Selecting previously unselected package libpcre2-32-0:arm64. 1110s Preparing to unpack .../104-libpcre2-32-0_10.46-1_arm64.deb ... 1110s Unpacking libpcre2-32-0:arm64 (10.46-1) ... 1110s Selecting previously unselected package libpcre2-posix3:arm64. 1110s Preparing to unpack .../105-libpcre2-posix3_10.46-1_arm64.deb ... 1110s Unpacking libpcre2-posix3:arm64 (10.46-1) ... 1110s Selecting previously unselected package libpcre2-dev:arm64. 1110s Preparing to unpack .../106-libpcre2-dev_10.46-1_arm64.deb ... 1110s Unpacking libpcre2-dev:arm64 (10.46-1) ... 1110s Selecting previously unselected package libpkgconf3:arm64. 1110s Preparing to unpack .../107-libpkgconf3_1.8.1-4build1_arm64.deb ... 1110s Unpacking libpkgconf3:arm64 (1.8.1-4build1) ... 1110s Selecting previously unselected package zlib1g-dev:arm64. 1110s Preparing to unpack .../108-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 1110s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 1110s Selecting previously unselected package libpng-dev:arm64. 1110s Preparing to unpack .../109-libpng-dev_1.6.54-1_arm64.deb ... 1110s Unpacking libpng-dev:arm64 (1.6.54-1) ... 1110s Selecting previously unselected package libpotrace0:arm64. 1110s Preparing to unpack .../110-libpotrace0_1.16-2build2_arm64.deb ... 1110s Unpacking libpotrace0:arm64 (1.16-2build2) ... 1110s Selecting previously unselected package libptexenc1:arm64. 1110s Preparing to unpack .../111-libptexenc1_2025.20250727.75242+ds-5build1_arm64.deb ... 1110s Unpacking libptexenc1:arm64 (2025.20250727.75242+ds-5build1) ... 1110s Selecting previously unselected package libreadline-dev:arm64. 1110s Preparing to unpack .../112-libreadline-dev_8.3-3_arm64.deb ... 1110s Unpacking libreadline-dev:arm64 (8.3-3) ... 1110s Selecting previously unselected package libsharpyuv0:arm64. 1110s Preparing to unpack .../113-libsharpyuv0_1.5.0-0.1build1_arm64.deb ... 1110s Unpacking libsharpyuv0:arm64 (1.5.0-0.1build1) ... 1110s Selecting previously unselected package libsm6:arm64. 1110s Preparing to unpack .../114-libsm6_2%3a1.2.6-1build1_arm64.deb ... 1110s Unpacking libsm6:arm64 (2:1.2.6-1build1) ... 1110s Selecting previously unselected package libsynctex2:arm64. 1110s Preparing to unpack .../115-libsynctex2_2025.20250727.75242+ds-5build1_arm64.deb ... 1110s Unpacking libsynctex2:arm64 (2025.20250727.75242+ds-5build1) ... 1110s Selecting previously unselected package libtcl8.6:arm64. 1110s Preparing to unpack .../116-libtcl8.6_8.6.17+dfsg-1build1_arm64.deb ... 1110s Unpacking libtcl8.6:arm64 (8.6.17+dfsg-1build1) ... 1110s Selecting previously unselected package libteckit0:arm64. 1110s Preparing to unpack .../117-libteckit0_2.5.13+ds-1_arm64.deb ... 1110s Unpacking libteckit0:arm64 (2.5.13+ds-1) ... 1110s Selecting previously unselected package libtexlua53-5:arm64. 1110s Preparing to unpack .../118-libtexlua53-5_2025.20250727.75242+ds-5build1_arm64.deb ... 1110s Unpacking libtexlua53-5:arm64 (2025.20250727.75242+ds-5build1) ... 1110s Selecting previously unselected package libjbig0:arm64. 1110s Preparing to unpack .../119-libjbig0_2.1-6.1ubuntu3_arm64.deb ... 1110s Unpacking libjbig0:arm64 (2.1-6.1ubuntu3) ... 1111s Selecting previously unselected package libwebp7:arm64. 1111s Preparing to unpack .../120-libwebp7_1.5.0-0.1build1_arm64.deb ... 1111s Unpacking libwebp7:arm64 (1.5.0-0.1build1) ... 1111s Selecting previously unselected package libtiff6:arm64. 1111s Preparing to unpack .../121-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 1111s Unpacking libtiff6:arm64 (4.7.0-3ubuntu3) ... 1111s Selecting previously unselected package libxft2:arm64. 1111s Preparing to unpack .../122-libxft2_2.3.6-1build2_arm64.deb ... 1111s Unpacking libxft2:arm64 (2.3.6-1build2) ... 1111s Selecting previously unselected package libxss1:arm64. 1111s Preparing to unpack .../123-libxss1_1%3a1.2.3-1build4_arm64.deb ... 1111s Unpacking libxss1:arm64 (1:1.2.3-1build4) ... 1111s Selecting previously unselected package libtk8.6:arm64. 1111s Preparing to unpack .../124-libtk8.6_8.6.17-1_arm64.deb ... 1111s Unpacking libtk8.6:arm64 (8.6.17-1) ... 1111s Selecting previously unselected package libxt6t64:arm64. 1111s Preparing to unpack .../125-libxt6t64_1%3a1.2.1-1.3_arm64.deb ... 1111s Unpacking libxt6t64:arm64 (1:1.2.1-1.3) ... 1111s Selecting previously unselected package libxmu6:arm64. 1111s Preparing to unpack .../126-libxmu6_2%3a1.1.3-4_arm64.deb ... 1111s Unpacking libxmu6:arm64 (2:1.1.3-4) ... 1111s Selecting previously unselected package libxpm4:arm64. 1111s Preparing to unpack .../127-libxpm4_1%3a3.5.17-1build3_arm64.deb ... 1111s Unpacking libxpm4:arm64 (1:3.5.17-1build3) ... 1111s Selecting previously unselected package libxaw7:arm64. 1111s Preparing to unpack .../128-libxaw7_2%3a1.0.16-1build1_arm64.deb ... 1111s Unpacking libxaw7:arm64 (2:1.0.16-1build1) ... 1111s Selecting previously unselected package libxi6:arm64. 1111s Preparing to unpack .../129-libxi6_2%3a1.8.2-2_arm64.deb ... 1111s Unpacking libxi6:arm64 (2:1.8.2-2) ... 1111s Selecting previously unselected package libzstd-dev:arm64. 1111s Preparing to unpack .../130-libzstd-dev_1.5.7+dfsg-3_arm64.deb ... 1111s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-3) ... 1111s Selecting previously unselected package libzzip-0-13t64:arm64. 1111s Preparing to unpack .../131-libzzip-0-13t64_0.13.78+dfsg.1-0.2_arm64.deb ... 1111s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.2) ... 1111s Selecting previously unselected package node-bootstrap-sass. 1111s Preparing to unpack .../132-node-bootstrap-sass_3.4.3-2_all.deb ... 1111s Unpacking node-bootstrap-sass (3.4.3-2) ... 1111s Selecting previously unselected package node-html5shiv. 1111s Preparing to unpack .../133-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1111s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1111s Selecting previously unselected package node-normalize.css. 1111s Preparing to unpack .../134-node-normalize.css_8.0.1-5.1_all.deb ... 1111s Unpacking node-normalize.css (8.0.1-5.1) ... 1111s Selecting previously unselected package pandoc-data. 1111s Preparing to unpack .../135-pandoc-data_3.1.11.1-3build1_all.deb ... 1111s Unpacking pandoc-data (3.1.11.1-3build1) ... 1111s Selecting previously unselected package pandoc. 1111s Preparing to unpack .../136-pandoc_3.1.11.1+ds-4_arm64.deb ... 1111s Unpacking pandoc (3.1.11.1+ds-4) ... 1112s Selecting previously unselected package zip. 1112s Preparing to unpack .../137-zip_3.0-15ubuntu3_arm64.deb ... 1112s Unpacking zip (3.0-15ubuntu3) ... 1112s Selecting previously unselected package unzip. 1112s Preparing to unpack .../138-unzip_6.0-29ubuntu1_arm64.deb ... 1112s Unpacking unzip (6.0-29ubuntu1) ... 1112s Selecting previously unselected package xdg-utils. 1112s Preparing to unpack .../139-xdg-utils_1.2.1-2ubuntu2_all.deb ... 1112s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 1112s Selecting previously unselected package r-base-core. 1112s Preparing to unpack .../140-r-base-core_4.5.2-1ubuntu2_arm64.deb ... 1112s Unpacking r-base-core (4.5.2-1ubuntu2) ... 1113s Selecting previously unselected package liblzma-dev:arm64. 1113s Preparing to unpack .../141-liblzma-dev_5.8.2-2_arm64.deb ... 1113s Unpacking liblzma-dev:arm64 (5.8.2-2) ... 1113s Selecting previously unselected package pkgconf-bin. 1113s Preparing to unpack .../142-pkgconf-bin_1.8.1-4build1_arm64.deb ... 1113s Unpacking pkgconf-bin (1.8.1-4build1) ... 1113s Selecting previously unselected package pkgconf:arm64. 1113s Preparing to unpack .../143-pkgconf_1.8.1-4build1_arm64.deb ... 1113s Unpacking pkgconf:arm64 (1.8.1-4build1) ... 1113s Selecting previously unselected package libtirpc-dev:arm64. 1113s Preparing to unpack .../144-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 1113s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 1113s Selecting previously unselected package r-base-dev. 1113s Preparing to unpack .../145-r-base-dev_4.5.2-1ubuntu2_all.deb ... 1113s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 1113s Selecting previously unselected package pkg-r-autopkgtest. 1113s Preparing to unpack .../146-pkg-r-autopkgtest_20250812_all.deb ... 1113s Unpacking pkg-r-autopkgtest (20250812) ... 1113s Selecting previously unselected package r-bioc-biocgenerics. 1113s Preparing to unpack .../147-r-bioc-biocgenerics_0.52.0-2_all.deb ... 1113s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 1113s Selecting previously unselected package r-bioc-biobase. 1113s Preparing to unpack .../148-r-bioc-biobase_2.66.0-2_arm64.deb ... 1113s Unpacking r-bioc-biobase (2.66.0-2) ... 1113s Selecting previously unselected package r-bioc-s4vectors. 1113s Preparing to unpack .../149-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 1113s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 1113s Selecting previously unselected package r-bioc-iranges. 1113s Preparing to unpack .../150-r-bioc-iranges_2.40.1-3_arm64.deb ... 1113s Unpacking r-bioc-iranges (2.40.1-3) ... 1113s Selecting previously unselected package r-cran-dbi. 1113s Preparing to unpack .../151-r-cran-dbi_1.2.3-1build1_all.deb ... 1113s Unpacking r-cran-dbi (1.2.3-1build1) ... 1113s Selecting previously unselected package r-cran-bit. 1113s Preparing to unpack .../152-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 1113s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 1113s Selecting previously unselected package r-cran-bit64. 1113s Preparing to unpack .../153-r-cran-bit64_4.6.0-1-4_arm64.deb ... 1113s Unpacking r-cran-bit64 (4.6.0-1-4) ... 1113s Selecting previously unselected package r-cran-rlang. 1113s Preparing to unpack .../154-r-cran-rlang_1.1.5-3_arm64.deb ... 1113s Unpacking r-cran-rlang (1.1.5-3) ... 1113s Selecting previously unselected package r-cran-cli. 1113s Preparing to unpack .../155-r-cran-cli_3.6.4-1_arm64.deb ... 1113s Unpacking r-cran-cli (3.6.4-1) ... 1113s Selecting previously unselected package r-cran-glue. 1113s Preparing to unpack .../156-r-cran-glue_1.8.0-1_arm64.deb ... 1113s Unpacking r-cran-glue (1.8.0-1) ... 1113s Selecting previously unselected package r-cran-lifecycle. 1113s Preparing to unpack .../157-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 1113s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 1114s Selecting previously unselected package r-cran-vctrs. 1114s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_arm64.deb ... 1114s Unpacking r-cran-vctrs (0.6.5-1) ... 1114s Selecting previously unselected package r-cran-blob. 1114s Preparing to unpack .../159-r-cran-blob_1.3.0-1_all.deb ... 1114s Unpacking r-cran-blob (1.3.0-1) ... 1114s Selecting previously unselected package r-cran-fastmap. 1114s Preparing to unpack .../160-r-cran-fastmap_1.2.0-1_arm64.deb ... 1114s Unpacking r-cran-fastmap (1.2.0-1) ... 1114s Selecting previously unselected package r-cran-cachem. 1114s Preparing to unpack .../161-r-cran-cachem_1.1.0-1_arm64.deb ... 1114s Unpacking r-cran-cachem (1.1.0-1) ... 1114s Selecting previously unselected package r-cran-memoise. 1114s Preparing to unpack .../162-r-cran-memoise_2.0.1-1build1_all.deb ... 1114s Unpacking r-cran-memoise (2.0.1-1build1) ... 1114s Selecting previously unselected package r-cran-pkgconfig. 1114s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 1114s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 1114s Selecting previously unselected package r-cran-plogr. 1114s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build2_all.deb ... 1114s Unpacking r-cran-plogr (0.2.0-3build2) ... 1114s Selecting previously unselected package r-cran-cpp11. 1114s Preparing to unpack .../165-r-cran-cpp11_0.5.3-1_all.deb ... 1114s Unpacking r-cran-cpp11 (0.5.3-1) ... 1114s Selecting previously unselected package r-cran-rsqlite. 1114s Preparing to unpack .../166-r-cran-rsqlite_2.3.9-1_arm64.deb ... 1114s Unpacking r-cran-rsqlite (2.3.9-1) ... 1114s Selecting previously unselected package r-cran-curl. 1114s Preparing to unpack .../167-r-cran-curl_7.0.0+dfsg-1_arm64.deb ... 1114s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 1114s Selecting previously unselected package r-cran-jsonlite. 1114s Preparing to unpack .../168-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 1114s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 1114s Selecting previously unselected package r-cran-mime. 1114s Preparing to unpack .../169-r-cran-mime_0.12-2_arm64.deb ... 1114s Unpacking r-cran-mime (0.12-2) ... 1114s Selecting previously unselected package r-cran-sys. 1114s Preparing to unpack .../170-r-cran-sys_3.4.3-1_arm64.deb ... 1114s Unpacking r-cran-sys (3.4.3-1) ... 1114s Selecting previously unselected package r-cran-askpass. 1114s Preparing to unpack .../171-r-cran-askpass_1.2.1-1_arm64.deb ... 1114s Unpacking r-cran-askpass (1.2.1-1) ... 1114s Selecting previously unselected package r-cran-openssl. 1114s Preparing to unpack .../172-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 1114s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 1114s Selecting previously unselected package r-cran-r6. 1114s Preparing to unpack .../173-r-cran-r6_2.6.1-1_all.deb ... 1114s Unpacking r-cran-r6 (2.6.1-1) ... 1114s Selecting previously unselected package r-cran-httr. 1114s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1114s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1114s Selecting previously unselected package r-cran-png. 1114s Preparing to unpack .../175-r-cran-png_0.1-8-1build2_arm64.deb ... 1114s Unpacking r-cran-png (0.1-8-1build2) ... 1114s Selecting previously unselected package r-bioc-zlibbioc. 1114s Preparing to unpack .../176-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 1114s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 1114s Selecting previously unselected package r-bioc-xvector. 1114s Preparing to unpack .../177-r-bioc-xvector_0.46.0-2_arm64.deb ... 1114s Unpacking r-bioc-xvector (0.46.0-2) ... 1114s Selecting previously unselected package r-bioc-ucsc.utils. 1114s Preparing to unpack .../178-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 1114s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 1114s Selecting previously unselected package r-bioc-genomeinfodbdata. 1114s Preparing to unpack .../179-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 1114s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 1115s Selecting previously unselected package r-bioc-genomeinfodb. 1115s Preparing to unpack .../180-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 1115s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 1115s Selecting previously unselected package r-cran-crayon. 1115s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ... 1115s Unpacking r-cran-crayon (1.5.3-1) ... 1115s Selecting previously unselected package r-bioc-biostrings. 1115s Preparing to unpack .../182-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 1115s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 1115s Selecting previously unselected package r-bioc-keggrest. 1115s Preparing to unpack .../183-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 1115s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 1115s Selecting previously unselected package r-bioc-annotationdbi. 1115s Preparing to unpack .../184-r-bioc-annotationdbi_1.68.0-2_all.deb ... 1115s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 1115s Selecting previously unselected package r-bioc-genomicranges. 1115s Preparing to unpack .../185-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 1115s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 1115s Selecting previously unselected package r-cran-lazyeval. 1115s Preparing to unpack .../186-r-cran-lazyeval_0.2.2-1build2_arm64.deb ... 1115s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 1115s Selecting previously unselected package r-bioc-annotationfilter. 1115s Preparing to unpack .../187-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ... 1115s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ... 1115s Selecting previously unselected package r-cran-generics. 1115s Preparing to unpack .../188-r-cran-generics_0.1.4-1_all.deb ... 1115s Unpacking r-cran-generics (0.1.4-1) ... 1115s Selecting previously unselected package r-cran-magrittr. 1115s Preparing to unpack .../189-r-cran-magrittr_2.0.3-1_arm64.deb ... 1115s Unpacking r-cran-magrittr (2.0.3-1) ... 1115s Selecting previously unselected package r-cran-utf8. 1115s Preparing to unpack .../190-r-cran-utf8_1.2.4-1_arm64.deb ... 1115s Unpacking r-cran-utf8 (1.2.4-1) ... 1115s Selecting previously unselected package r-cran-pillar. 1115s Preparing to unpack .../191-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 1115s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 1115s Selecting previously unselected package r-cran-fansi. 1115s Preparing to unpack .../192-r-cran-fansi_1.0.6-2_arm64.deb ... 1115s Unpacking r-cran-fansi (1.0.6-2) ... 1115s Selecting previously unselected package r-cran-tibble. 1115s Preparing to unpack .../193-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 1115s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 1115s Selecting previously unselected package r-cran-withr. 1115s Preparing to unpack .../194-r-cran-withr_3.0.2+dfsg-1_all.deb ... 1115s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 1115s Selecting previously unselected package r-cran-tidyselect. 1115s Preparing to unpack .../195-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 1115s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 1115s Selecting previously unselected package r-cran-dplyr. 1115s Preparing to unpack .../196-r-cran-dplyr_1.1.4-4_arm64.deb ... 1115s Unpacking r-cran-dplyr (1.1.4-4) ... 1116s Selecting previously unselected package r-cran-purrr. 1116s Preparing to unpack .../197-r-cran-purrr_1.0.4-1_arm64.deb ... 1116s Unpacking r-cran-purrr (1.0.4-1) ... 1116s Selecting previously unselected package r-cran-stringi. 1116s Preparing to unpack .../198-r-cran-stringi_1.8.4-1build2_arm64.deb ... 1116s Unpacking r-cran-stringi (1.8.4-1build2) ... 1116s Selecting previously unselected package r-cran-stringr. 1116s Preparing to unpack .../199-r-cran-stringr_1.5.1-1_all.deb ... 1116s Unpacking r-cran-stringr (1.5.1-1) ... 1116s Selecting previously unselected package r-cran-tidyr. 1116s Preparing to unpack .../200-r-cran-tidyr_1.3.1-1_arm64.deb ... 1116s Unpacking r-cran-tidyr (1.3.1-1) ... 1116s Selecting previously unselected package r-cran-dbplyr. 1116s Preparing to unpack .../201-r-cran-dbplyr_2.5.1+dfsg-1_all.deb ... 1116s Unpacking r-cran-dbplyr (2.5.1+dfsg-1) ... 1116s Selecting previously unselected package r-cran-filelock. 1116s Preparing to unpack .../202-r-cran-filelock_1.0.3-1_arm64.deb ... 1116s Unpacking r-cran-filelock (1.0.3-1) ... 1116s Selecting previously unselected package r-bioc-biocfilecache. 1116s Preparing to unpack .../203-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 1116s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 1116s Selecting previously unselected package r-bioc-biocio. 1116s Preparing to unpack .../204-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 1116s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 1116s Selecting previously unselected package r-cran-formatr. 1116s Preparing to unpack .../205-r-cran-formatr_1.14-2_all.deb ... 1116s Unpacking r-cran-formatr (1.14-2) ... 1116s Selecting previously unselected package r-cran-lambda.r. 1116s Preparing to unpack .../206-r-cran-lambda.r_1.2.4-2build2_all.deb ... 1116s Unpacking r-cran-lambda.r (1.2.4-2build2) ... 1116s Selecting previously unselected package r-cran-futile.options. 1116s Preparing to unpack .../207-r-cran-futile.options_1.0.1-3build2_all.deb ... 1116s Unpacking r-cran-futile.options (1.0.1-3build2) ... 1116s Selecting previously unselected package r-cran-futile.logger. 1116s Preparing to unpack .../208-r-cran-futile.logger_1.4.3-4build2_all.deb ... 1116s Unpacking r-cran-futile.logger (1.4.3-4build2) ... 1116s Selecting previously unselected package r-cran-snow. 1116s Preparing to unpack .../209-r-cran-snow_1%3a0.4.4-2build1_all.deb ... 1116s Unpacking r-cran-snow (1:0.4.4-2build1) ... 1116s Selecting previously unselected package r-cran-codetools. 1116s Preparing to unpack .../210-r-cran-codetools_0.2-20-1build1_all.deb ... 1116s Unpacking r-cran-codetools (0.2-20-1build1) ... 1116s Selecting previously unselected package r-cran-bh. 1116s Preparing to unpack .../211-r-cran-bh_1.84.0-1_all.deb ... 1116s Unpacking r-cran-bh (1.84.0-1) ... 1116s Selecting previously unselected package r-bioc-biocparallel. 1116s Preparing to unpack .../212-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 1116s Unpacking r-bioc-biocparallel (1.40.0-2) ... 1116s Selecting previously unselected package r-cran-base64enc. 1116s Preparing to unpack .../213-r-cran-base64enc_0.1-3-3build1_arm64.deb ... 1116s Unpacking r-cran-base64enc (0.1-3-3build1) ... 1116s Selecting previously unselected package r-cran-digest. 1116s Preparing to unpack .../214-r-cran-digest_0.6.39-1_arm64.deb ... 1116s Unpacking r-cran-digest (0.6.39-1) ... 1116s Selecting previously unselected package r-cran-htmltools. 1116s Preparing to unpack .../215-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 1116s Unpacking r-cran-htmltools (0.5.8.1-1) ... 1116s Selecting previously unselected package r-cran-evaluate. 1116s Preparing to unpack .../216-r-cran-evaluate_1.0.5-1_all.deb ... 1116s Unpacking r-cran-evaluate (1.0.5-1) ... 1117s Selecting previously unselected package r-cran-xfun. 1117s Preparing to unpack .../217-r-cran-xfun_0.55+dfsg-1_arm64.deb ... 1117s Unpacking r-cran-xfun (0.55+dfsg-1) ... 1117s Selecting previously unselected package r-cran-highr. 1117s Preparing to unpack .../218-r-cran-highr_0.11+dfsg-1_all.deb ... 1117s Unpacking r-cran-highr (0.11+dfsg-1) ... 1117s Selecting previously unselected package r-cran-yaml. 1117s Preparing to unpack .../219-r-cran-yaml_2.3.10-1_arm64.deb ... 1117s Unpacking r-cran-yaml (2.3.10-1) ... 1117s Selecting previously unselected package libjs-mathjax. 1117s Preparing to unpack .../220-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 1117s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 1117s Selecting previously unselected package r-cran-knitr. 1117s Preparing to unpack .../221-r-cran-knitr_1.51+dfsg-1_all.deb ... 1117s Unpacking r-cran-knitr (1.51+dfsg-1) ... 1117s Selecting previously unselected package r-cran-jquerylib. 1117s Preparing to unpack .../222-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 1117s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 1117s Selecting previously unselected package r-cran-fs. 1117s Preparing to unpack .../223-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 1117s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 1117s Selecting previously unselected package r-cran-rappdirs. 1117s Preparing to unpack .../224-r-cran-rappdirs_0.3.3-1build1_arm64.deb ... 1117s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 1117s Selecting previously unselected package r-cran-sass. 1117s Preparing to unpack .../225-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 1117s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 1117s Selecting previously unselected package r-cran-bslib. 1117s Preparing to unpack .../226-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 1117s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 1117s Selecting previously unselected package r-cran-fontawesome. 1117s Preparing to unpack .../227-r-cran-fontawesome_0.5.3-1_all.deb ... 1117s Unpacking r-cran-fontawesome (0.5.3-1) ... 1118s Selecting previously unselected package r-cran-tinytex. 1118s Preparing to unpack .../228-r-cran-tinytex_0.58-1_all.deb ... 1118s Unpacking r-cran-tinytex (0.58-1) ... 1118s Selecting previously unselected package libjs-modernizr. 1118s Preparing to unpack .../229-libjs-modernizr_3.13.0-0.1build1_all.deb ... 1118s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 1118s Selecting previously unselected package r-cran-littler. 1118s Preparing to unpack .../230-r-cran-littler_0.3.22-1_arm64.deb ... 1118s Unpacking r-cran-littler (0.3.22-1) ... 1118s Selecting previously unselected package r-cran-pkgkitten. 1118s Preparing to unpack .../231-r-cran-pkgkitten_0.2.4-1_all.deb ... 1118s Unpacking r-cran-pkgkitten (0.2.4-1) ... 1118s Selecting previously unselected package r-cran-rcpp. 1118s Preparing to unpack .../232-r-cran-rcpp_1.1.0-1_arm64.deb ... 1118s Unpacking r-cran-rcpp (1.1.0-1) ... 1118s Selecting previously unselected package r-cran-later. 1118s Preparing to unpack .../233-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 1118s Unpacking r-cran-later (1.4.1+dfsg-1) ... 1118s Selecting previously unselected package r-cran-promises. 1118s Preparing to unpack .../234-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 1118s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 1118s Selecting previously unselected package r-cran-httpuv. 1118s Preparing to unpack .../235-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 1118s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 1118s Selecting previously unselected package r-cran-xtable. 1118s Preparing to unpack .../236-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 1118s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 1118s Selecting previously unselected package r-cran-sourcetools. 1118s Preparing to unpack .../237-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 1118s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 1118s Selecting previously unselected package r-cran-commonmark. 1118s Preparing to unpack .../238-r-cran-commonmark_1.9.5-1_arm64.deb ... 1118s Unpacking r-cran-commonmark (1.9.5-1) ... 1118s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 1118s Preparing to unpack .../239-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 1118s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1118s Selecting previously unselected package r-cran-shiny. 1118s Preparing to unpack .../240-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 1118s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 1118s Selecting previously unselected package r-cran-rmarkdown. 1118s Preparing to unpack .../241-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 1118s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 1118s Selecting previously unselected package r-cran-bookdown. 1118s Preparing to unpack .../242-r-cran-bookdown_0.42+dfsg-1_all.deb ... 1118s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 1118s Selecting previously unselected package r-cran-biocmanager. 1118s Preparing to unpack .../243-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 1118s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 1119s Selecting previously unselected package tex-common. 1119s Preparing to unpack .../244-tex-common_6.20_all.deb ... 1119s Unpacking tex-common (6.20) ... 1119s Selecting previously unselected package t1utils. 1119s Preparing to unpack .../245-t1utils_1.41-4build4_arm64.deb ... 1119s Unpacking t1utils (1.41-4build4) ... 1119s Selecting previously unselected package texlive-binaries. 1119s Preparing to unpack .../246-texlive-binaries_2025.20250727.75242+ds-5build1_arm64.deb ... 1119s Unpacking texlive-binaries (2025.20250727.75242+ds-5build1) ... 1119s Selecting previously unselected package texlive-base. 1119s Preparing to unpack .../247-texlive-base_2025.20260124-1_all.deb ... 1119s Unpacking texlive-base (2025.20260124-1) ... 1120s Selecting previously unselected package texlive-latex-base. 1120s Preparing to unpack .../248-texlive-latex-base_2025.20260124-1_all.deb ... 1120s Unpacking texlive-latex-base (2025.20260124-1) ... 1120s Selecting previously unselected package texlive-bibtex-extra. 1120s Preparing to unpack .../249-texlive-bibtex-extra_2025.20260124-1_all.deb ... 1120s Unpacking texlive-bibtex-extra (2025.20260124-1) ... 1123s Selecting previously unselected package r-bioc-biocversion. 1123s Preparing to unpack .../250-r-bioc-biocversion_3.20.0-2_all.deb ... 1123s Unpacking r-bioc-biocversion (3.20.0-2) ... 1123s Selecting previously unselected package r-bioc-biocstyle. 1123s Preparing to unpack .../251-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 1123s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 1123s Selecting previously unselected package r-cran-hms. 1123s Preparing to unpack .../252-r-cran-hms_1.1.4-1_all.deb ... 1123s Unpacking r-cran-hms (1.1.4-1) ... 1123s Selecting previously unselected package r-cran-prettyunits. 1123s Preparing to unpack .../253-r-cran-prettyunits_1.2.0-1_all.deb ... 1123s Unpacking r-cran-prettyunits (1.2.0-1) ... 1123s Selecting previously unselected package r-cran-progress. 1123s Preparing to unpack .../254-r-cran-progress_1.2.3-1_all.deb ... 1123s Unpacking r-cran-progress (1.2.3-1) ... 1123s Selecting previously unselected package r-cran-httr2. 1123s Preparing to unpack .../255-r-cran-httr2_1.1.1-2_all.deb ... 1123s Unpacking r-cran-httr2 (1.1.1-2) ... 1123s Selecting previously unselected package r-cran-xml2. 1123s Preparing to unpack .../256-r-cran-xml2_1.4.1-1_arm64.deb ... 1123s Unpacking r-cran-xml2 (1.4.1-1) ... 1123s Selecting previously unselected package r-bioc-biomart. 1123s Preparing to unpack .../257-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 1123s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 1123s Selecting previously unselected package r-cran-farver. 1123s Preparing to unpack .../258-r-cran-farver_2.1.2-1_arm64.deb ... 1123s Unpacking r-cran-farver (2.1.2-1) ... 1123s Selecting previously unselected package r-cran-labeling. 1123s Preparing to unpack .../259-r-cran-labeling_0.4.3-1_all.deb ... 1123s Unpacking r-cran-labeling (0.4.3-1) ... 1123s Selecting previously unselected package r-cran-rcolorbrewer. 1123s Preparing to unpack .../260-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 1123s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 1123s Selecting previously unselected package r-cran-viridislite. 1123s Preparing to unpack .../261-r-cran-viridislite_0.4.3-1_all.deb ... 1123s Unpacking r-cran-viridislite (0.4.3-1) ... 1123s Selecting previously unselected package r-cran-scales. 1123s Preparing to unpack .../262-r-cran-scales_1.4.0-1_all.deb ... 1123s Unpacking r-cran-scales (1.4.0-1) ... 1123s Selecting previously unselected package r-cran-gtable. 1123s Preparing to unpack .../263-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 1123s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 1123s Selecting previously unselected package r-cran-isoband. 1123s Preparing to unpack .../264-r-cran-isoband_0.2.7-1_arm64.deb ... 1123s Unpacking r-cran-isoband (0.2.7-1) ... 1123s Selecting previously unselected package r-cran-s7. 1124s Preparing to unpack .../265-r-cran-s7_0.2.0-1_arm64.deb ... 1124s Unpacking r-cran-s7 (0.2.0-1) ... 1124s Selecting previously unselected package r-cran-ggplot2. 1124s Preparing to unpack .../266-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 1124s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 1124s Selecting previously unselected package r-cran-cluster. 1124s Preparing to unpack .../267-r-cran-cluster_2.1.8.2-1_arm64.deb ... 1124s Unpacking r-cran-cluster (2.1.8.2-1) ... 1124s Selecting previously unselected package r-cran-lattice. 1124s Preparing to unpack .../268-r-cran-lattice_0.22-7-1_arm64.deb ... 1124s Unpacking r-cran-lattice (0.22-7-1) ... 1124s Selecting previously unselected package r-cran-matrix. 1124s Preparing to unpack .../269-r-cran-matrix_1.7-4-1_arm64.deb ... 1124s Unpacking r-cran-matrix (1.7-4-1) ... 1124s Selecting previously unselected package r-cran-survival. 1124s Preparing to unpack .../270-r-cran-survival_3.8-6-1_arm64.deb ... 1124s Unpacking r-cran-survival (3.8-6-1) ... 1124s Selecting previously unselected package r-cran-rpart. 1124s Preparing to unpack .../271-r-cran-rpart_4.1.24-1build1_arm64.deb ... 1124s Unpacking r-cran-rpart (4.1.24-1build1) ... 1124s Selecting previously unselected package r-cran-nnet. 1124s Preparing to unpack .../272-r-cran-nnet_7.3-20-1_arm64.deb ... 1124s Unpacking r-cran-nnet (7.3-20-1) ... 1124s Selecting previously unselected package r-cran-foreign. 1124s Preparing to unpack .../273-r-cran-foreign_0.8.91-1_arm64.deb ... 1124s Unpacking r-cran-foreign (0.8.91-1) ... 1124s Selecting previously unselected package r-cran-gridextra. 1124s Preparing to unpack .../274-r-cran-gridextra_2.3-3build2_all.deb ... 1124s Unpacking r-cran-gridextra (2.3-3build2) ... 1124s Selecting previously unselected package r-cran-data.table. 1124s Preparing to unpack .../275-r-cran-data.table_1.17.0+dfsg-1_arm64.deb ... 1124s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 1124s Selecting previously unselected package r-cran-backports. 1124s Preparing to unpack .../276-r-cran-backports_1.5.0-2_arm64.deb ... 1124s Unpacking r-cran-backports (1.5.0-2) ... 1124s Selecting previously unselected package r-cran-checkmate. 1124s Preparing to unpack .../277-r-cran-checkmate_2.3.2-1_arm64.deb ... 1124s Unpacking r-cran-checkmate (2.3.2-1) ... 1124s Selecting previously unselected package r-cran-htmlwidgets. 1124s Preparing to unpack .../278-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 1124s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 1124s Selecting previously unselected package r-cran-rstudioapi. 1124s Preparing to unpack .../279-r-cran-rstudioapi_0.18.0-1_all.deb ... 1124s Unpacking r-cran-rstudioapi (0.18.0-1) ... 1125s Selecting previously unselected package r-cran-htmltable. 1125s Preparing to unpack .../280-r-cran-htmltable_2.4.3-1_all.deb ... 1125s Unpacking r-cran-htmltable (2.4.3-1) ... 1125s Selecting previously unselected package r-cran-colorspace. 1125s Preparing to unpack .../281-r-cran-colorspace_2.1-1+dfsg-1_arm64.deb ... 1125s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 1125s Selecting previously unselected package r-cran-formula. 1125s Preparing to unpack .../282-r-cran-formula_1.2-5-1_all.deb ... 1125s Unpacking r-cran-formula (1.2-5-1) ... 1125s Selecting previously unselected package r-cran-chron. 1125s Preparing to unpack .../283-r-cran-chron_2.3-62-1_arm64.deb ... 1125s Unpacking r-cran-chron (2.3-62-1) ... 1125s Selecting previously unselected package r-cran-jpeg. 1125s Preparing to unpack .../284-r-cran-jpeg_0.1-10-1_arm64.deb ... 1125s Unpacking r-cran-jpeg (0.1-10-1) ... 1125s Selecting previously unselected package r-cran-deldir. 1125s Preparing to unpack .../285-r-cran-deldir_2.0-4-1build1_arm64.deb ... 1125s Unpacking r-cran-deldir (2.0-4-1build1) ... 1125s Selecting previously unselected package r-cran-rcppeigen. 1125s Preparing to unpack .../286-r-cran-rcppeigen_0.3.4.0.2-1_arm64.deb ... 1125s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 1125s Selecting previously unselected package r-cran-interp. 1125s Preparing to unpack .../287-r-cran-interp_1.1-6-1_arm64.deb ... 1125s Unpacking r-cran-interp (1.1-6-1) ... 1125s Selecting previously unselected package r-cran-mass. 1125s Preparing to unpack .../288-r-cran-mass_7.3-65-1_arm64.deb ... 1125s Unpacking r-cran-mass (7.3-65-1) ... 1125s Selecting previously unselected package r-cran-latticeextra. 1125s Preparing to unpack .../289-r-cran-latticeextra_0.6-31-1_all.deb ... 1125s Unpacking r-cran-latticeextra (0.6-31-1) ... 1125s Selecting previously unselected package r-cran-acepack. 1125s Preparing to unpack .../290-r-cran-acepack_1.6.3-1_arm64.deb ... 1125s Unpacking r-cran-acepack (1.6.3-1) ... 1125s Selecting previously unselected package r-cran-viridis. 1125s Preparing to unpack .../291-r-cran-viridis_0.6.5-1_all.deb ... 1125s Unpacking r-cran-viridis (0.6.5-1) ... 1125s Selecting previously unselected package r-cran-hmisc. 1125s Preparing to unpack .../292-r-cran-hmisc_5.2-5-2_arm64.deb ... 1125s Unpacking r-cran-hmisc (5.2-5-2) ... 1125s Selecting previously unselected package r-cran-dichromat. 1125s Preparing to unpack .../293-r-cran-dichromat_1%3a2.0-0.1-1_all.deb ... 1125s Unpacking r-cran-dichromat (1:2.0-0.1-1) ... 1125s Selecting previously unselected package r-cran-matrixstats. 1125s Preparing to unpack .../294-r-cran-matrixstats_1.5.0-1_arm64.deb ... 1125s Unpacking r-cran-matrixstats (1.5.0-1) ... 1125s Selecting previously unselected package r-bioc-matrixgenerics. 1125s Preparing to unpack .../295-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 1125s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 1126s Selecting previously unselected package r-cran-abind. 1126s Preparing to unpack .../296-r-cran-abind_1.4-8-1build1_all.deb ... 1126s Unpacking r-cran-abind (1.4-8-1build1) ... 1126s Selecting previously unselected package r-bioc-s4arrays. 1126s Preparing to unpack .../297-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 1126s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 1126s Selecting previously unselected package r-bioc-sparsearray. 1126s Preparing to unpack .../298-r-bioc-sparsearray_1.6.2+dfsg-2_arm64.deb ... 1126s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 1126s Selecting previously unselected package r-bioc-delayedarray. 1126s Preparing to unpack .../299-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 1126s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 1126s Selecting previously unselected package r-bioc-summarizedexperiment. 1126s Preparing to unpack .../300-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 1126s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 1126s Selecting previously unselected package r-cran-bitops. 1126s Preparing to unpack .../301-r-cran-bitops_1.0-9-1_arm64.deb ... 1126s Unpacking r-cran-bitops (1.0-9-1) ... 1126s Selecting previously unselected package r-bioc-rhtslib. 1126s Preparing to unpack .../302-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 1126s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 1126s Selecting previously unselected package r-bioc-rsamtools. 1126s Preparing to unpack .../303-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 1126s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 1126s Selecting previously unselected package r-bioc-genomicalignments. 1126s Preparing to unpack .../304-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 1126s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 1126s Selecting previously unselected package r-cran-xml. 1126s Preparing to unpack .../305-r-cran-xml_3.99-0.20-1_arm64.deb ... 1126s Unpacking r-cran-xml (3.99-0.20-1) ... 1126s Selecting previously unselected package r-cran-rcurl. 1126s Preparing to unpack .../306-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 1126s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 1126s Selecting previously unselected package r-cran-rjson. 1126s Preparing to unpack .../307-r-cran-rjson_0.2.23-1_arm64.deb ... 1126s Unpacking r-cran-rjson (0.2.23-1) ... 1126s Selecting previously unselected package r-cran-restfulr. 1126s Preparing to unpack .../308-r-cran-restfulr_0.0.15-1_arm64.deb ... 1126s Unpacking r-cran-restfulr (0.0.15-1) ... 1126s Selecting previously unselected package r-bioc-rtracklayer. 1126s Preparing to unpack .../309-r-bioc-rtracklayer_1.66.0-3_arm64.deb ... 1126s Unpacking r-bioc-rtracklayer (1.66.0-3) ... 1126s Selecting previously unselected package r-bioc-genomicfeatures. 1126s Preparing to unpack .../310-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 1126s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 1126s Selecting previously unselected package r-bioc-bsgenome. 1127s Preparing to unpack .../311-r-bioc-bsgenome_1.74.0-2_all.deb ... 1127s Unpacking r-bioc-bsgenome (1.74.0-2) ... 1127s Selecting previously unselected package r-bioc-variantannotation. 1127s Preparing to unpack .../312-r-bioc-variantannotation_1.52.0-2_arm64.deb ... 1127s Unpacking r-bioc-variantannotation (1.52.0-2) ... 1127s Selecting previously unselected package r-bioc-protgenerics. 1127s Preparing to unpack .../313-r-bioc-protgenerics_1.38.0-2_all.deb ... 1127s Unpacking r-bioc-protgenerics (1.38.0-2) ... 1127s Selecting previously unselected package r-bioc-ensembldb. 1127s Preparing to unpack .../314-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ... 1127s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ... 1127s Selecting previously unselected package r-bioc-biovizbase. 1127s Preparing to unpack .../315-r-bioc-biovizbase_1.54.0-2_arm64.deb ... 1127s Unpacking r-bioc-biovizbase (1.54.0-2) ... 1127s Selecting previously unselected package r-cran-plyr. 1127s Preparing to unpack .../316-r-cran-plyr_1.8.9-1_arm64.deb ... 1127s Unpacking r-cran-plyr (1.8.9-1) ... 1127s Selecting previously unselected package r-cran-reshape2. 1127s Preparing to unpack .../317-r-cran-reshape2_1.4.4-2build2_arm64.deb ... 1127s Unpacking r-cran-reshape2 (1.4.4-2build2) ... 1127s Selecting previously unselected package r-bioc-graph. 1127s Preparing to unpack .../318-r-bioc-graph_1.84.1-2_arm64.deb ... 1127s Unpacking r-bioc-graph (1.84.1-2) ... 1127s Selecting previously unselected package r-bioc-rbgl. 1127s Preparing to unpack .../319-r-bioc-rbgl_1.82.0+dfsg-2_arm64.deb ... 1127s Unpacking r-bioc-rbgl (1.82.0+dfsg-2) ... 1127s Selecting previously unselected package r-bioc-txdbmaker. 1127s Preparing to unpack .../320-r-bioc-txdbmaker_1.2.1+ds-2_all.deb ... 1127s Unpacking r-bioc-txdbmaker (1.2.1+ds-2) ... 1127s Selecting previously unselected package r-bioc-organismdbi. 1127s Preparing to unpack .../321-r-bioc-organismdbi_1.48.0+dfsg-2_all.deb ... 1127s Unpacking r-bioc-organismdbi (1.48.0+dfsg-2) ... 1127s Selecting previously unselected package r-cran-ellipsis. 1127s Preparing to unpack .../322-r-cran-ellipsis_0.3.2-2build1_arm64.deb ... 1127s Unpacking r-cran-ellipsis (0.3.2-2build1) ... 1127s Selecting previously unselected package r-cran-forcats. 1127s Preparing to unpack .../323-r-cran-forcats_1.0.1-1_all.deb ... 1127s Unpacking r-cran-forcats (1.0.1-1) ... 1127s Selecting previously unselected package r-cran-patchwork. 1127s Preparing to unpack .../324-r-cran-patchwork_1.3.0-1_all.deb ... 1127s Unpacking r-cran-patchwork (1.3.0-1) ... 1127s Selecting previously unselected package r-cran-ggstats. 1127s Preparing to unpack .../325-r-cran-ggstats_0.7.0-2_all.deb ... 1127s Unpacking r-cran-ggstats (0.7.0-2) ... 1127s Selecting previously unselected package r-cran-ggally. 1127s Preparing to unpack .../326-r-cran-ggally_2.2.1-1_all.deb ... 1127s Unpacking r-cran-ggally (2.2.1-1) ... 1127s Selecting previously unselected package r-bioc-ggbio. 1128s Preparing to unpack .../327-r-bioc-ggbio_1.54.0-2_all.deb ... 1128s Unpacking r-bioc-ggbio (1.54.0-2) ... 1128s Selecting previously unselected package r-cran-brio. 1128s Preparing to unpack .../328-r-cran-brio_1.1.5-1_arm64.deb ... 1128s Unpacking r-cran-brio (1.1.5-1) ... 1128s Selecting previously unselected package r-cran-ps. 1128s Preparing to unpack .../329-r-cran-ps_1.9.0-1_arm64.deb ... 1128s Unpacking r-cran-ps (1.9.0-1) ... 1128s Selecting previously unselected package r-cran-processx. 1128s Preparing to unpack .../330-r-cran-processx_3.8.6-1_arm64.deb ... 1128s Unpacking r-cran-processx (3.8.6-1) ... 1128s Selecting previously unselected package r-cran-callr. 1128s Preparing to unpack .../331-r-cran-callr_3.7.6-1_all.deb ... 1128s Unpacking r-cran-callr (3.7.6-1) ... 1128s Selecting previously unselected package r-cran-desc. 1128s Preparing to unpack .../332-r-cran-desc_1.4.3-1_all.deb ... 1128s Unpacking r-cran-desc (1.4.3-1) ... 1128s Selecting previously unselected package r-cran-diffobj. 1128s Preparing to unpack .../333-r-cran-diffobj_0.3.5-1build1_arm64.deb ... 1128s Unpacking r-cran-diffobj (0.3.5-1build1) ... 1128s Selecting previously unselected package r-cran-pkgbuild. 1128s Preparing to unpack .../334-r-cran-pkgbuild_1.4.8-1_all.deb ... 1128s Unpacking r-cran-pkgbuild (1.4.8-1) ... 1128s Selecting previously unselected package r-cran-rprojroot. 1128s Preparing to unpack .../335-r-cran-rprojroot_2.1.1-1_all.deb ... 1128s Unpacking r-cran-rprojroot (2.1.1-1) ... 1128s Selecting previously unselected package r-cran-pkgload. 1128s Preparing to unpack .../336-r-cran-pkgload_1.4.1-1_all.deb ... 1128s Unpacking r-cran-pkgload (1.4.1-1) ... 1128s Selecting previously unselected package r-cran-praise. 1128s Preparing to unpack .../337-r-cran-praise_1.0.0-4build2_all.deb ... 1128s Unpacking r-cran-praise (1.0.0-4build2) ... 1128s Selecting previously unselected package r-cran-waldo. 1128s Preparing to unpack .../338-r-cran-waldo_0.6.2-1_all.deb ... 1128s Unpacking r-cran-waldo (0.6.2-1) ... 1128s Selecting previously unselected package r-cran-testthat. 1128s Preparing to unpack .../339-r-cran-testthat_3.2.3-1_arm64.deb ... 1128s Unpacking r-cran-testthat (3.2.3-1) ... 1128s Setting up libjs-json (0~20221030+~1.0.8-1build1) ... 1128s Setting up javascript-common (12+nmu1build1) ... 1128s Setting up libgraphite2-3:arm64 (1.3.14-11ubuntu1) ... 1128s Setting up libpixman-1-0:arm64 (0.46.4-1) ... 1128s Setting up libsharpyuv0:arm64 (1.5.0-0.1build1) ... 1128s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ... 1128s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu2) ... 1128s Setting up libzstd-dev:arm64 (1.5.7+dfsg-3) ... 1128s Setting up libxpm4:arm64 (1:3.5.17-1build3) ... 1128s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ... 1128s Setting up libxi6:arm64 (2:1.8.2-2) ... 1128s Setting up libxrender1:arm64 (1:0.9.12-1) ... 1128s Setting up libdatrie1:arm64 (0.2.14-1) ... 1128s Setting up libjs-popper.js (1.16.1+ds-6build1) ... 1128s Setting up libxcb-render0:arm64 (1.17.0-2ubuntu1) ... 1128s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 1128s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 1128s Setting up libjs-lunr (2.3.9~dfsg-2) ... 1128s Setting up unzip (6.0-29ubuntu1) ... 1128s Setting up liblatex-tounicode-perl (1.93-1) ... 1128s Setting up x11-common (1:7.7+24ubuntu1) ... 1129s Setting up node-html5shiv (3.7.3+dfsg-5) ... 1129s Setting up libdeflate0:arm64 (1.23-2build1) ... 1129s Setting up linux-libc-dev:arm64 (6.19.0-3.3) ... 1129s Setting up libjs-microplugin.js (0.0.3+dfsg-2) ... 1129s Setting up libxcb-shm0:arm64 (1.17.0-2ubuntu1) ... 1129s Setting up libgomp1:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libjs-modernizr (3.13.0-0.1build1) ... 1129s Setting up libjbig0:arm64 (2.1-6.1ubuntu3) ... 1129s Setting up libpcre2-16-0:arm64 (10.46-1) ... 1129s Setting up libjs-es5-shim (4.6.7-2) ... 1129s Setting up tex-common (6.20) ... 1129s update-language: texlive-base not installed and configured, doing nothing! 1129s Setting up libio-string-perl (1.08-4) ... 1129s Setting up zip (3.0-15ubuntu3) ... 1129s Setting up libpcre2-32-0:arm64 (10.46-1) ... 1129s Setting up libblas3:arm64 (3.12.1-7ubuntu1) ... 1129s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 1129s Setting up libtirpc-dev:arm64 (1.3.6+ds-1) ... 1129s Setting up libpkgconf3:arm64 (1.8.1-4build1) ... 1129s Setting up rpcsvc-proto (1.4.3-1build1) ... 1129s Setting up libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.2) ... 1129s Setting up libteckit0:arm64 (2.5.13+ds-1) ... 1129s Setting up t1utils (1.41-4build4) ... 1129s Setting up libtexlua53-5:arm64 (2025.20250727.75242+ds-5build1) ... 1129s Setting up libjs-d3 (3.5.17-4build1) ... 1129s Setting up fonts-dejavu-mono (2.37-8build1) ... 1129s Setting up libmpc3:arm64 (1.3.1-2) ... 1129s Setting up libtcl8.6:arm64 (8.6.17+dfsg-1build1) ... 1129s Setting up libmpfi0:arm64 (1.5.4+ds-4build1) ... 1129s Setting up icu-devtools (78.2-1ubuntu1) ... 1129s Setting up fonts-dejavu-core (2.37-8build1) ... 1129s Setting up pkgconf-bin (1.8.1-4build1) ... 1129s Setting up libjpeg-turbo8:arm64 (2.1.5-4ubuntu3) ... 1129s Setting up libkpathsea6:arm64 (2025.20250727.75242+ds-5build1) ... 1129s Setting up libgfortran5:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libwebp7:arm64 (1.5.0-0.1build1) ... 1129s Setting up liblzma-dev:arm64 (5.8.2-2) ... 1129s Setting up libubsan1:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libpcre2-posix3:arm64 (10.46-1) ... 1129s Setting up libjs-highlight.js (10.7.3+dfsg-2) ... 1129s Setting up libhwasan0:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libcrypt-dev:arm64 (1:4.5.1-1) ... 1129s Setting up libasan8:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up fonts-lmodern (2.005-1build1) ... 1129s Setting up liblua5.4-0:arm64 (5.4.8-1) ... 1129s Setting up libharfbuzz0b:arm64 (12.3.2-1) ... 1129s Setting up libthai-data (0.1.30-1) ... 1129s Setting up node-bootstrap-sass (3.4.3-2) ... 1129s Setting up libjs-prettify (2015.12.04+dfsg-3) ... 1129s Setting up libxss1:arm64 (1:1.2.3-1build4) ... 1129s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ... 1129s Setting up libpaper2:arm64 (2.2.5-0.3build1) ... 1129s Setting up pandoc-data (3.1.11.1-3build1) ... 1129s Setting up libtsan2:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 1129s Setting up libisl23:arm64 (0.27-1build1) ... 1129s Setting up libc-dev-bin (2.42-2ubuntu4) ... 1129s Setting up libdeflate-dev:arm64 (1.23-2build1) ... 1129s Setting up node-normalize.css (8.0.1-5.1) ... 1129s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 1129s Setting up xdg-utils (1.2.1-2ubuntu2) ... 1129s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 1129s Setting up libcc1-0:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up liblsan0:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libblas-dev:arm64 (3.12.1-7ubuntu1) ... 1129s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 1129s Setting up dctrl-tools (2.24-3build4) ... 1129s Setting up libjs-bootstrap (3.4.1+dfsg-6) ... 1129s Setting up libitm1:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libsynctex2:arm64 (2025.20250727.75242+ds-5build1) ... 1129s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 1129s Setting up libpotrace0:arm64 (1.16-2build2) ... 1129s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 1129s Setting up cpp-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1129s Setting up libice6:arm64 (2:1.1.1-1build1) ... 1129s Setting up liblapack3:arm64 (3.12.1-7ubuntu1) ... 1129s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 1129s Setting up libgcc-15-dev:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up fontconfig-config (2.17.1-3ubuntu1) ... 1129s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 1129s Setting up libpaper-utils (2.2.5-0.3build1) ... 1129s Setting up libbibtex-parser-perl (1.93+dfsg-1) ... 1129s Setting up libgfortran-15-dev:arm64 (15.2.0-12ubuntu1) ... 1129s Setting up libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 1129s Setting up pkgconf:arm64 (1.8.1-4build1) ... 1129s Setting up libthai0:arm64 (0.1.30-1) ... 1129s Setting up cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1129s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ... 1129s Setting up libptexenc1:arm64 (2025.20250727.75242+ds-5build1) ... 1129s Setting up pandoc (3.1.11.1+ds-4) ... 1129s Setting up liblapack-dev:arm64 (3.12.1-7ubuntu1) ... 1129s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 1129s Setting up cpp-15 (15.2.0-12ubuntu1) ... 1129s Setting up libtiff6:arm64 (4.7.0-3ubuntu3) ... 1129s Setting up cpp (4:15.2.0-4ubuntu1) ... 1129s Setting up libc6-dev:arm64 (2.42-2ubuntu4) ... 1129s Setting up libfontconfig1:arm64 (2.17.1-3ubuntu1) ... 1129s Setting up libsm6:arm64 (2:1.2.6-1build1) ... 1129s Setting up libicu-dev:arm64 (78.2-1ubuntu1) ... 1129s Setting up libbz2-dev:arm64 (1.0.8-6build2) ... 1129s Setting up fontconfig (2.17.1-3ubuntu1) ... 1132s Regenerating fonts cache... done. 1132s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu3) ... 1132s Setting up libxft2:arm64 (2.3.6-1build2) ... 1132s Setting up libncurses-dev:arm64 (6.6+20251231-1) ... 1132s Setting up gcc-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1132s Setting up libpcre2-dev:arm64 (10.46-1) ... 1132s Setting up libtk8.6:arm64 (8.6.17-1) ... 1132s Setting up libpango-1.0-0:arm64 (1.57.0-1) ... 1132s Setting up libreadline-dev:arm64 (8.3-3) ... 1132s Setting up libcairo2:arm64 (1.18.4-3) ... 1132s Setting up gcc-15 (15.2.0-12ubuntu1) ... 1132s Setting up libstdc++-15-dev:arm64 (15.2.0-12ubuntu1) ... 1132s Setting up gfortran-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1132s Setting up g++-15-aarch64-linux-gnu (15.2.0-12ubuntu1) ... 1132s Setting up libxt6t64:arm64 (1:1.2.1-1.3) ... 1132s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 1132s Setting up libboost1.90-dev:arm64 (1.90.0-2ubuntu1) ... 1132s Setting up libboost-dev:arm64 (1.90.0.0ubuntu3) ... 1132s Setting up libpangoft2-1.0-0:arm64 (1.57.0-1) ... 1132s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1132s Setting up g++-15 (15.2.0-12ubuntu1) ... 1132s Setting up gfortran-15 (15.2.0-12ubuntu1) ... 1132s Setting up libpangocairo-1.0-0:arm64 (1.57.0-1) ... 1132s Setting up gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1132s Setting up libxmu6:arm64 (2:1.1.3-4) ... 1132s Setting up libpng-dev:arm64 (1.6.54-1) ... 1132s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 1132s Setting up libxaw7:arm64 (2:1.0.16-1build1) ... 1132s Setting up gcc (4:15.2.0-4ubuntu1) ... 1132s Setting up r-base-core (4.5.2-1ubuntu2) ... 1132s Creating config file /etc/R/Renviron with new version 1132s Setting up r-cran-crayon (1.5.3-1) ... 1132s Setting up r-cran-labeling (0.4.3-1) ... 1132s Setting up r-cran-sourcetools (0.1.7-1-1) ... 1132s Setting up r-cran-futile.options (1.0.1-3build2) ... 1132s Setting up r-cran-lattice (0.22-7-1) ... 1132s Setting up r-cran-ps (1.9.0-1) ... 1132s Setting up r-cran-farver (2.1.2-1) ... 1132s Setting up r-cran-formatr (1.14-2) ... 1132s Setting up r-cran-formula (1.2-5-1) ... 1132s Setting up r-cran-xml (3.99-0.20-1) ... 1132s Setting up r-cran-viridislite (0.4.3-1) ... 1132s Setting up texlive-binaries (2025.20250727.75242+ds-5build1) ... 1132s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 1132s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 1132s Setting up r-cran-cluster (2.1.8.2-1) ... 1132s Setting up g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1132s Setting up r-cran-nnet (7.3-20-1) ... 1132s Setting up gfortran-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 1132s Setting up r-cran-lazyeval (0.2.2-1build2) ... 1132s Setting up r-cran-commonmark (1.9.5-1) ... 1132s Setting up r-cran-rjson (0.2.23-1) ... 1132s Setting up r-cran-r6 (2.6.1-1) ... 1132s Setting up r-cran-pkgkitten (0.2.4-1) ... 1132s Setting up r-cran-jpeg (0.1-10-1) ... 1132s Setting up r-cran-chron (2.3-62-1) ... 1132s Setting up texlive-base (2025.20260124-1) ... 1133s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 1133s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 1133s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 1133s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 1134s Setting up r-cran-magrittr (2.0.3-1) ... 1134s Setting up r-cran-rappdirs (0.3.3-1build1) ... 1134s Setting up r-cran-filelock (1.0.3-1) ... 1134s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 1134s Setting up r-cran-littler (0.3.22-1) ... 1134s Setting up r-cran-bh (1.84.0-1) ... 1134s Setting up r-cran-fs (1.6.5+dfsg-1) ... 1134s Setting up r-cran-rcpp (1.1.0-1) ... 1134s Setting up r-cran-curl (7.0.0+dfsg-1) ... 1134s Setting up r-cran-codetools (0.2-20-1build1) ... 1134s Setting up r-cran-brio (1.1.5-1) ... 1134s Setting up r-cran-diffobj (0.3.5-1build1) ... 1134s Setting up r-bioc-biocgenerics (0.52.0-2) ... 1134s Setting up r-cran-rlang (1.1.5-3) ... 1134s Setting up r-cran-matrixstats (1.5.0-1) ... 1134s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 1134s Setting up r-cran-xfun (0.55+dfsg-1) ... 1134s Setting up r-cran-sys (3.4.3-1) ... 1134s Setting up r-cran-plogr (0.2.0-3build2) ... 1134s Setting up r-cran-withr (3.0.2+dfsg-1) ... 1134s Setting up r-cran-backports (1.5.0-2) ... 1134s Setting up r-cran-processx (3.8.6-1) ... 1134s Setting up r-cran-mime (0.12-2) ... 1134s Setting up r-cran-praise (1.0.0-4build2) ... 1134s Setting up r-cran-generics (0.1.4-1) ... 1134s Setting up r-cran-base64enc (0.1-3-3build1) ... 1134s Setting up r-cran-abind (1.4-8-1build1) ... 1134s Setting up r-cran-digest (0.6.39-1) ... 1134s Setting up r-cran-yaml (2.3.10-1) ... 1134s Setting up r-cran-lambda.r (1.2.4-2build2) ... 1134s Setting up r-bioc-protgenerics (1.38.0-2) ... 1134s Setting up r-cran-evaluate (1.0.5-1) ... 1134s Setting up r-cran-dbi (1.2.3-1build1) ... 1134s Setting up r-cran-highr (0.11+dfsg-1) ... 1134s Setting up r-cran-prettyunits (1.2.0-1) ... 1134s Setting up r-cran-fansi (1.0.6-2) ... 1134s Setting up r-cran-mass (7.3-65-1) ... 1134s Setting up r-cran-checkmate (2.3.2-1) ... 1134s Setting up r-cran-acepack (1.6.3-1) ... 1134s Setting up r-cran-snow (1:0.4.4-2build1) ... 1134s Setting up r-cran-data.table (1.17.0+dfsg-1) ... 1134s Setting up r-cran-glue (1.8.0-1) ... 1134s Setting up r-cran-foreign (0.8.91-1) ... 1134s Setting up r-cran-bit (4.6.0+dfsg-1) ... 1134s Setting up r-cran-xtable (1:1.8-4-2build1) ... 1134s Setting up r-cran-cli (3.6.4-1) ... 1134s Setting up gfortran (4:15.2.0-4ubuntu1) ... 1134s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1134s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1134s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1134s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1134s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ... 1134s Setting up r-cran-bitops (1.0-9-1) ... 1134s Setting up r-bioc-biocversion (3.20.0-2) ... 1134s Setting up r-cran-rprojroot (2.1.1-1) ... 1134s Setting up r-cran-bit64 (4.6.0-1-4) ... 1134s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 1134s Setting up r-cran-dichromat (1:2.0-0.1-1) ... 1134s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 1134s Setting up r-cran-deldir (2.0-4-1build1) ... 1134s Setting up r-cran-askpass (1.2.1-1) ... 1134s Setting up r-cran-fastmap (1.2.0-1) ... 1134s Setting up r-cran-png (0.1-8-1build2) ... 1134s Setting up r-bioc-biobase (2.66.0-2) ... 1134s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 1134s Setting up r-cran-rstudioapi (0.18.0-1) ... 1134s Setting up r-cran-pkgconfig (2.0.3-2build2) ... 1134s Setting up r-cran-utf8 (1.2.4-1) ... 1134s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 1134s Setting up r-cran-stringi (1.8.4-1build2) ... 1134s Setting up texlive-latex-base (2025.20260124-1) ... 1134s Setting up r-cran-s7 (0.2.0-1) ... 1134s Setting up r-cran-cpp11 (0.5.3-1) ... 1134s Setting up r-cran-plyr (1.8.9-1) ... 1134s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ... 1134s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 1134s Setting up r-cran-isoband (0.2.7-1) ... 1134s Setting up r-cran-futile.logger (1.4.3-4build2) ... 1134s Setting up r-cran-waldo (0.6.2-1) ... 1134s Setting up r-cran-scales (1.4.0-1) ... 1134s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 1134s Setting up r-cran-later (1.4.1+dfsg-1) ... 1134s Setting up r-cran-matrix (1.7-4-1) ... 1134s Setting up r-cran-htmltools (0.5.8.1-1) ... 1134s Setting up r-cran-tinytex (0.58-1) ... 1134s Setting up r-cran-knitr (1.51+dfsg-1) ... 1134s Setting up g++ (4:15.2.0-4ubuntu1) ... 1134s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1134s Setting up r-cran-cachem (1.1.0-1) ... 1134s Setting up r-cran-sass (0.4.9+dfsg-1) ... 1134s Setting up build-essential (12.12ubuntu2) ... 1134s Setting up r-bioc-iranges (2.40.1-3) ... 1134s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 1134s Setting up r-cran-restfulr (0.0.15-1) ... 1134s Setting up r-cran-vctrs (0.6.5-1) ... 1134s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... 1134s Setting up r-bioc-graph (1.84.1-2) ... 1134s Setting up r-cran-pillar (1.11.1+dfsg-1) ... 1134s Setting up r-cran-ellipsis (0.3.2-2build1) ... 1134s Setting up r-bioc-rbgl (1.82.0+dfsg-2) ... 1134s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 1134s Setting up r-base-dev (4.5.2-1ubuntu2) ... 1134s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 1134s Setting up r-cran-stringr (1.5.1-1) ... 1134s Setting up r-bioc-biocparallel (1.40.0-2) ... 1134s Setting up r-cran-callr (3.7.6-1) ... 1134s Setting up r-cran-ggplot2 (4.0.2+dfsg-1) ... 1134s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 1134s Setting up r-cran-desc (1.4.3-1) ... 1134s Setting up r-cran-xml2 (1.4.1-1) ... 1134s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 1134s Setting up r-cran-fontawesome (0.5.3-1) ... 1134s Setting up r-cran-survival (3.8-6-1) ... 1134s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 1134s Setting up r-cran-forcats (1.0.1-1) ... 1134s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ... 1134s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 1134s Setting up texlive-bibtex-extra (2025.20260124-1) ... 1134s Setting up r-cran-reshape2 (1.4.4-2build2) ... 1134s Setting up r-cran-interp (1.1-6-1) ... 1134s Setting up r-cran-httr2 (1.1.1-2) ... 1134s Setting up r-cran-httr (1.4.7+dfsg-1) ... 1134s Setting up r-cran-gridextra (2.3-3build2) ... 1134s Setting up r-cran-hms (1.1.4-1) ... 1134s Setting up r-cran-memoise (2.0.1-1build1) ... 1134s Setting up r-cran-promises (1.3.2+dfsg-1) ... 1134s Setting up r-cran-purrr (1.0.4-1) ... 1134s Setting up r-cran-blob (1.3.0-1) ... 1134s Setting up pkg-r-autopkgtest (20250812) ... 1134s Setting up r-bioc-xvector (0.46.0-2) ... 1134s Setting up r-cran-pkgbuild (1.4.8-1) ... 1134s Setting up r-cran-dplyr (1.1.4-4) ... 1134s Setting up r-cran-rsqlite (2.3.9-1) ... 1134s Setting up r-cran-progress (1.2.3-1) ... 1134s Setting up r-cran-pkgload (1.4.1-1) ... 1134s Setting up r-cran-patchwork (1.3.0-1) ... 1134s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 1134s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 1134s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 1134s Setting up r-cran-rpart (4.1.24-1build1) ... 1134s Setting up r-cran-latticeextra (0.6-31-1) ... 1134s Setting up r-cran-viridis (0.6.5-1) ... 1134s Setting up r-cran-testthat (3.2.3-1) ... 1134s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 1134s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 1134s Setting up r-cran-tidyr (1.3.1-1) ... 1134s Setting up r-cran-dbplyr (2.5.1+dfsg-1) ... 1134s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 1134s Setting up r-cran-ggstats (0.7.0-2) ... 1134s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 1134s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 1134s Setting up r-cran-ggally (2.2.1-1) ... 1134s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 1134s Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ... 1134s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 1134s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 1134s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 1134s Setting up r-cran-bookdown (0.42+dfsg-1) ... 1134s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 1134s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 1134s Setting up r-bioc-annotationdbi (1.68.0-2) ... 1134s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 1134s Setting up r-bioc-biomart (2.62.1+dfsg-1) ... 1134s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 1134s Setting up r-bioc-genomicalignments (1.42.0-2) ... 1134s Setting up r-bioc-rtracklayer (1.66.0-3) ... 1134s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 1134s Setting up r-cran-htmltable (2.4.3-1) ... 1134s Setting up r-bioc-bsgenome (1.74.0-2) ... 1134s Setting up r-bioc-txdbmaker (1.2.1+ds-2) ... 1134s Setting up r-bioc-ensembldb (2.30.0+dfsg-3) ... 1134s Setting up r-bioc-organismdbi (1.48.0+dfsg-2) ... 1134s Setting up r-cran-hmisc (5.2-5-2) ... 1134s Setting up r-bioc-variantannotation (1.52.0-2) ... 1134s Setting up r-bioc-biovizbase (1.54.0-2) ... 1134s Setting up r-bioc-ggbio (1.54.0-2) ... 1134s Processing triggers for libc-bin (2.42-2ubuntu4) ... 1134s Processing triggers for man-db (2.13.1-1build1) ... 1135s Processing triggers for install-info (7.2-5) ... 1135s Processing triggers for tex-common (6.20) ... 1135s Running updmap-sys. This may take some time... done. 1135s Running mktexlsr /var/lib/texmf ... done. 1135s Building format(s) --all. 1162s This may take some time... done. 1163s autopkgtest [23:37:09]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1163s autopkgtest [23:37:09]: test pkg-r-autopkgtest: [----------------------- 1163s Test: Try to load the R library ggbio 1163s 1163s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 1163s Copyright (C) 2025 The R Foundation for Statistical Computing 1163s Platform: aarch64-unknown-linux-gnu 1163s 1163s R is free software and comes with ABSOLUTELY NO WARRANTY. 1163s You are welcome to redistribute it under certain conditions. 1163s Type 'license()' or 'licence()' for distribution details. 1163s 1163s R is a collaborative project with many contributors. 1163s Type 'contributors()' for more information and 1163s 'citation()' on how to cite R or R packages in publications. 1163s 1163s Type 'demo()' for some demos, 'help()' for on-line help, or 1163s 'help.start()' for an HTML browser interface to help. 1163s Type 'q()' to quit R. 1163s 1164s > library('ggbio') 1164s Loading required package: BiocGenerics 1164s 1164s Attaching package: ‘BiocGenerics’ 1164s 1164s The following objects are masked from ‘package:stats’: 1164s 1164s IQR, mad, sd, var, xtabs 1164s 1164s The following objects are masked from ‘package:base’: 1164s 1164s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 1164s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 1164s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 1164s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 1164s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 1164s table, tapply, union, unique, unsplit, which.max, which.min 1164s 1164s Loading required package: ggplot2 1165s Registered S3 method overwritten by 'GGally': 1165s method from 1165s +.gg ggplot2 1177s Need specific help about ggbio? try mailing 1177s the maintainer or visit https://lawremi.github.io/ggbio/ 1177s 1177s Attaching package: 'ggbio' 1177s 1177s The following objects are masked from 'package:ggplot2': 1177s 1177s geom_bar, geom_rect, geom_segment, ggsave, stat_bin, stat_identity, 1177s xlim 1177s 1177s > 1177s Test: Run tests for ggbio 1177s Start: test-all.R 1178s 1178s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 1178s Copyright (C) 2025 The R Foundation for Statistical Computing 1178s Platform: aarch64-unknown-linux-gnu 1178s 1178s R is free software and comes with ABSOLUTELY NO WARRANTY. 1178s You are welcome to redistribute it under certain conditions. 1178s Type 'license()' or 'licence()' for distribution details. 1178s 1178s R is a collaborative project with many contributors. 1178s Type 'contributors()' for more information and 1178s 'citation()' on how to cite R or R packages in publications. 1178s 1178s Type 'demo()' for some demos, 'help()' for on-line help, or 1178s 'help.start()' for an HTML browser interface to help. 1178s Type 'q()' to quit R. 1178s 1178s > library(testthat) 1178s > test_check("ggbio") 1178s Loading required package: ggbio 1178s Loading required package: BiocGenerics 1178s 1178s Attaching package: ‘BiocGenerics’ 1178s 1178s The following objects are masked from ‘package:stats’: 1178s 1178s IQR, mad, sd, var, xtabs 1178s 1178s The following objects are masked from ‘package:base’: 1178s 1178s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 1178s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 1178s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 1178s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 1178s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 1178s table, tapply, union, unique, unsplit, which.max, which.min 1178s 1178s Loading required package: ggplot2 1179s Registered S3 method overwritten by 'GGally': 1179s method from 1179s +.gg ggplot2 1191s Need specific help about ggbio? try mailing 1191s the maintainer or visit https://lawremi.github.io/ggbio/ 1192s 1192s Attaching package: 'ggbio' 1192s 1192s The following objects are masked from 'package:ggplot2': 1192s 1192s geom_bar, geom_rect, geom_segment, ggsave, stat_bin, stat_identity, 1192s xlim 1192s 1192s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ] 1192s > 1192s autopkgtest [23:37:38]: test pkg-r-autopkgtest: -----------------------] 1192s autopkgtest [23:37:38]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1192s pkg-r-autopkgtest PASS 1193s autopkgtest [23:37:39]: @@@@@@@@@@@@@@@@@@@@ summary 1193s pkg-r-autopkgtest PASS