0s autopkgtest [21:10:42]: starting date and time: 2025-10-20 21:10:42+0000 0s autopkgtest [21:10:42]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [21:10:42]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qrwzsvwu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:python-pluggy --apt-upgrade python-pyspike --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.4.2-1 python-pluggy/1.6.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-9.secgroup --name adt-resolute-arm64-python-pyspike-20251020-211042-juju-7f2275-prod-proposed-migration-environment-15-e056bfa4-869c-4a59-912c-8c6dd10cc294 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-arm64-python-pyspike-20251020-211042-juju-7f2275-prod-proposed-migration-environment-15-e056bfa4-869c-4a59-912c-8c6dd10cc294 from image adt/ubuntu-resolute-arm64-server-20251020.img (UUID 53f7e888-0b33-40b7-be7f-09b2db152d64)... 69s autopkgtest [21:11:51]: testbed dpkg architecture: arm64 69s autopkgtest [21:11:51]: testbed apt version: 3.1.8ubuntu1 70s autopkgtest [21:11:52]: @@@@@@@@@@@@@@@@@@@@ test bed setup 70s autopkgtest [21:11:52]: testbed release detected to be: None 71s autopkgtest [21:11:53]: updating testbed package index (apt update) 71s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 72s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 72s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 72s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 72s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [14.3 kB] 72s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [646 kB] 73s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 73s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [59.3 kB] 73s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [115 kB] 73s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [43.8 kB] 73s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [409 kB] 73s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [5672 B] 73s Fetched 1382 kB in 2s (724 kB/s) 75s Reading package lists... 76s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 76s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 76s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 76s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 78s Reading package lists... 78s Reading package lists... 78s Building dependency tree... 78s Reading state information... 79s Calculating upgrade... 80s The following packages will be upgraded: 80s libbrotli1 libjson-c5 python3-inflect python3-oauthlib python3-zipp 80s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 80s Need to get 512 kB of archives. 80s After this operation, 31.7 kB of additional disk space will be used. 80s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libjson-c5 arm64 0.18+ds-1.1 [37.5 kB] 80s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libbrotli1 arm64 1.1.0-2build6 [336 kB] 80s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-inflect all 7.5.0-1 [33.9 kB] 80s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-oauthlib all 3.3.1-1 [93.5 kB] 80s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-zipp all 3.23.0-1 [10.4 kB] 81s dpkg-preconfigure: unable to re-open stdin: No such file or directory 81s Fetched 512 kB in 1s (817 kB/s) 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83364 files and directories currently installed.) 82s Preparing to unpack .../libjson-c5_0.18+ds-1.1_arm64.deb ... 82s Unpacking libjson-c5:arm64 (0.18+ds-1.1) over (0.18+ds-1) ... 82s Preparing to unpack .../libbrotli1_1.1.0-2build6_arm64.deb ... 82s Unpacking libbrotli1:arm64 (1.1.0-2build6) over (1.1.0-2build5) ... 82s Preparing to unpack .../python3-inflect_7.5.0-1_all.deb ... 82s Unpacking python3-inflect (7.5.0-1) over (7.3.1-2) ... 83s Preparing to unpack .../python3-oauthlib_3.3.1-1_all.deb ... 83s Unpacking python3-oauthlib (3.3.1-1) over (3.2.2-3) ... 83s Preparing to unpack .../python3-zipp_3.23.0-1_all.deb ... 83s Unpacking python3-zipp (3.23.0-1) over (3.21.0-1) ... 83s Setting up libbrotli1:arm64 (1.1.0-2build6) ... 83s Setting up python3-zipp (3.23.0-1) ... 84s Setting up python3-inflect (7.5.0-1) ... 84s Setting up python3-oauthlib (3.3.1-1) ... 85s Setting up libjson-c5:arm64 (0.18+ds-1.1) ... 85s Processing triggers for libc-bin (2.42-0ubuntu3) ... 85s autopkgtest [21:12:07]: upgrading testbed (apt dist-upgrade and autopurge) 85s Reading package lists... 86s Building dependency tree... 86s Reading state information... 86s Calculating upgrade... 87s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s Reading package lists... 87s Building dependency tree... 87s Reading state information... 88s Solving dependencies... 88s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s autopkgtest [21:12:14]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 09:50:31 UTC 2025 92s autopkgtest [21:12:14]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pyspike 97s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-pyspike 0.8.0+dfsg-3.1build2 (dsc) [2172 B] 97s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-pyspike 0.8.0+dfsg-3.1build2 (tar) [16.5 MB] 97s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-pyspike 0.8.0+dfsg-3.1build2 (diff) [4688 B] 98s gpgv: Signature made Tue Mar 4 19:21:41 2025 UTC 98s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 98s gpgv: Can't check signature: No public key 98s dpkg-source: warning: cannot verify inline signature for ./python-pyspike_0.8.0+dfsg-3.1build2.dsc: no acceptable signature found 98s autopkgtest [21:12:20]: testing package python-pyspike version 0.8.0+dfsg-3.1build2 99s autopkgtest [21:12:21]: build not needed 100s autopkgtest [21:12:22]: test upstream.sh: preparing testbed 100s Reading package lists... 101s Building dependency tree... 101s Reading state information... 102s Solving dependencies... 103s The following NEW packages will be installed: 103s libblas3 libgfortran5 liblapack3 python3-all python3-decorator 103s python3-iniconfig python3-numpy python3-numpy-dev python3-packaging 103s python3-pluggy python3-pyspike python3-pytest python3-scipy 103s 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. 103s Need to get 23.6 MB of archives. 103s After this operation, 104 MB of additional disk space will be used. 103s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1ubuntu1 [146 kB] 103s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-6build1 [186 kB] 104s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-5ubuntu1 [450 kB] 104s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-6build1 [2340 kB] 104s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-numpy arm64 1:2.2.4+ds-1ubuntu1 [3986 kB] 105s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-all arm64 3.13.7-1 [884 B] 105s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-decorator all 5.2.1-2 [28.1 kB] 105s Get:8 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 105s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-packaging all 25.0-1 [52.8 kB] 105s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 python3-pluggy all 1.6.0-1 [21.0 kB] 105s Get:11 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pyspike arm64 0.8.0+dfsg-3.1build2 [286 kB] 105s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 python3-pytest all 8.4.2-1 [268 kB] 105s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-scipy arm64 1.15.3-1 [15.8 MB] 106s Fetched 23.6 MB in 3s (8810 kB/s) 106s Selecting previously unselected package python3-numpy-dev:arm64. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83374 files and directories currently installed.) 106s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_arm64.deb ... 106s Unpacking python3-numpy-dev:arm64 (1:2.2.4+ds-1ubuntu1) ... 106s Selecting previously unselected package libblas3:arm64. 106s Preparing to unpack .../01-libblas3_3.12.1-6build1_arm64.deb ... 107s Unpacking libblas3:arm64 (3.12.1-6build1) ... 107s Selecting previously unselected package libgfortran5:arm64. 107s Preparing to unpack .../02-libgfortran5_15.2.0-5ubuntu1_arm64.deb ... 107s Unpacking libgfortran5:arm64 (15.2.0-5ubuntu1) ... 107s Selecting previously unselected package liblapack3:arm64. 107s Preparing to unpack .../03-liblapack3_3.12.1-6build1_arm64.deb ... 107s Unpacking liblapack3:arm64 (3.12.1-6build1) ... 107s Selecting previously unselected package python3-numpy. 107s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_arm64.deb ... 107s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 107s Selecting previously unselected package python3-all. 107s Preparing to unpack .../05-python3-all_3.13.7-1_arm64.deb ... 107s Unpacking python3-all (3.13.7-1) ... 107s Selecting previously unselected package python3-decorator. 107s Preparing to unpack .../06-python3-decorator_5.2.1-2_all.deb ... 107s Unpacking python3-decorator (5.2.1-2) ... 107s Selecting previously unselected package python3-iniconfig. 107s Preparing to unpack .../07-python3-iniconfig_1.1.1-2_all.deb ... 107s Unpacking python3-iniconfig (1.1.1-2) ... 107s Selecting previously unselected package python3-packaging. 107s Preparing to unpack .../08-python3-packaging_25.0-1_all.deb ... 107s Unpacking python3-packaging (25.0-1) ... 107s Selecting previously unselected package python3-pluggy. 107s Preparing to unpack .../09-python3-pluggy_1.6.0-1_all.deb ... 107s Unpacking python3-pluggy (1.6.0-1) ... 107s Selecting previously unselected package python3-pyspike. 108s Preparing to unpack .../10-python3-pyspike_0.8.0+dfsg-3.1build2_arm64.deb ... 108s Unpacking python3-pyspike (0.8.0+dfsg-3.1build2) ... 108s Selecting previously unselected package python3-pytest. 108s Preparing to unpack .../11-python3-pytest_8.4.2-1_all.deb ... 108s Unpacking python3-pytest (8.4.2-1) ... 108s Selecting previously unselected package python3-scipy. 108s Preparing to unpack .../12-python3-scipy_1.15.3-1_arm64.deb ... 108s Unpacking python3-scipy (1.15.3-1) ... 109s Setting up python3-iniconfig (1.1.1-2) ... 109s Setting up python3-all (3.13.7-1) ... 109s Setting up python3-decorator (5.2.1-2) ... 109s Setting up libblas3:arm64 (3.12.1-6build1) ... 109s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 109s Setting up python3-packaging (25.0-1) ... 109s Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1ubuntu1) ... 109s Setting up libgfortran5:arm64 (15.2.0-5ubuntu1) ... 109s Setting up python3-pluggy (1.6.0-1) ... 110s Setting up liblapack3:arm64 (3.12.1-6build1) ... 110s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 110s Setting up python3-pytest (8.4.2-1) ... 110s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 114s Setting up python3-scipy (1.15.3-1) ... 121s Setting up python3-pyspike (0.8.0+dfsg-3.1build2) ... 121s Processing triggers for man-db (2.13.1-1) ... 123s Processing triggers for libc-bin (2.42-0ubuntu3) ... 124s autopkgtest [21:12:46]: test upstream.sh: [----------------------- 124s Running upstream tests with Python 3.13. 125s ============================= test session starts ============================== 125s platform linux -- Python 3.13.7, pytest-8.4.2, pluggy-1.6.0 -- /usr/bin/python3.13 125s cachedir: .pytest_cache 125s rootdir: /tmp/autopkgtest.HCH6Hk/autopkgtest_tmp 125s plugins: typeguard-4.4.2 126s collecting ... collected 50 items 126s 127s test/numeric/test_regression_random_spikes.py::test_regression_random PASSED [ 2%] 127s test/test_MRTS.py::test_MRTS PASSED [ 4%] 127s test/test_MRTS.py::test_autoThresh PASSED [ 6%] 127s test/test_directionality.py::test_spike_directionality PASSED [ 8%] 127s test/test_directionality.py::test_spike_train_order PASSED [ 10%] 127s test/test_distance.py::test_isi PASSED [ 12%] 127s test/test_distance.py::test_spike PASSED [ 14%] 127s test/test_distance.py::test_spike_sync PASSED [ 16%] 127s test/test_distance.py::test_multi_isi PASSED [ 18%] 127s test/test_distance.py::test_multi_spike PASSED [ 20%] 127s test/test_distance.py::test_multi_spike_sync PASSED [ 22%] 127s test/test_distance.py::test_isi_matrix PASSED [ 24%] 127s test/test_distance.py::test_spike_matrix PASSED [ 26%] 127s test/test_distance.py::test_spike_sync_matrix PASSED [ 28%] 127s test/test_distance.py::test_regression_spiky PASSED [ 30%] 127s test/test_distance.py::test_multi_variate_subsets PASSED [ 32%] 127s test/test_empty.py::test_get_non_empty PASSED [ 34%] 127s test/test_empty.py::test_isi_empty PASSED [ 36%] 127s test/test_empty.py::test_spike_empty PASSED [ 38%] 127s test/test_empty.py::test_spike_sync_empty PASSED [ 40%] 127s test/test_function.py::test_pwc PASSED [ 42%] 127s test/test_function.py::test_pwc_add PASSED [ 44%] 127s test/test_function.py::test_pwc_mul PASSED [ 46%] 127s test/test_function.py::test_pwc_avrg PASSED [ 48%] 127s test/test_function.py::test_pwc_integral PASSED [ 50%] 127s test/test_function.py::test_pwc_integral_bad_bounds_inv PASSED [ 52%] 127s test/test_function.py::test_pwc_integral_bad_bounds_oob_1 PASSED [ 54%] 127s test/test_function.py::test_pwc_integral_bad_bounds_oob_2 PASSED [ 56%] 127s test/test_function.py::test_pwl PASSED [ 58%] 127s test/test_function.py::test_pwl_add PASSED [ 60%] 127s test/test_function.py::test_pwl_mul PASSED [ 62%] 127s test/test_function.py::test_pwl_avrg PASSED [ 64%] 127s test/test_function.py::test_df PASSED [ 66%] 127s test/test_generic_interfaces.py::test_isi_profile PASSED [ 68%] 127s test/test_generic_interfaces.py::test_isi_distance PASSED [ 70%] 127s test/test_generic_interfaces.py::test_spike_profile PASSED [ 72%] 127s test/test_generic_interfaces.py::test_spike_distance PASSED [ 74%] 127s test/test_generic_interfaces.py::test_spike_sync_profile PASSED [ 76%] 127s test/test_generic_interfaces.py::test_spike_sync PASSED [ 78%] 127s test/test_reconcile.py::test_reconcile PASSED [ 80%] 127s test/test_regression/test_regression_15.py::test_regression_15_isi PASSED [ 82%] 127s test/test_regression/test_regression_15.py::test_regression_15_spike PASSED [ 84%] 127s test/test_regression/test_regression_15.py::test_regression_15_sync PASSED [ 86%] 127s test/test_save_load.py::test_save_load PASSED [ 88%] 127s test/test_spikes.py::test_load_from_txt PASSED [ 90%] 127s test/test_spikes.py::test_load_time_series PASSED [ 92%] 127s test/test_spikes.py::test_merge_spike_trains PASSED [ 94%] 127s test/test_spikes.py::test_merge_empty_spike_trains PASSED [ 96%] 127s test/test_sync_filter.py::test_single_prof PASSED [ 98%] 128s test/test_sync_filter.py::test_filter PASSED [100%] 128s 128s =============================== warnings summary =============================== 128s ../../../usr/lib/python3/dist-packages/pyspike/__init__.py:40 128s /usr/lib/python3/dist-packages/pyspike/__init__.py:40: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 128s from pkg_resources import get_distribution, DistributionNotFound 128s 128s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 128s ======================== 50 passed, 1 warning in 2.60s ========================= 128s autopkgtest [21:12:50]: test upstream.sh: -----------------------] 129s upstream.sh PASS 129s autopkgtest [21:12:51]: test upstream.sh: - - - - - - - - - - results - - - - - - - - - - 129s autopkgtest [21:12:51]: @@@@@@@@@@@@@@@@@@@@ summary 129s upstream.sh PASS