0s autopkgtest [11:10:22]: starting date and time: 2025-11-17 11:10:22+0000 0s autopkgtest [11:10:22]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [11:10:22]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.sfiunuim/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy,src:python3-defaults --apt-upgrade python-loompy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=numpy/1:2.3.4+ds-3ubuntu1 python3-defaults/3.13.7-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-11.secgroup --name adt-resolute-arm64-python-loompy-20251117-111022-juju-7f2275-prod-proposed-migration-environment-2-93109377-25d5-4188-a2bb-26330ab5e3f4 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-arm64-python-loompy-20251117-111022-juju-7f2275-prod-proposed-migration-environment-2-93109377-25d5-4188-a2bb-26330ab5e3f4 from image adt/ubuntu-resolute-arm64-server-20251117.img (UUID 1cd33fbb-18df-4c5a-b8f0-2dcb25269485)... 71s autopkgtest [11:11:33]: testbed dpkg architecture: arm64 72s autopkgtest [11:11:34]: testbed apt version: 3.1.11 72s autopkgtest [11:11:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 72s autopkgtest [11:11:34]: testbed release detected to be: None 73s autopkgtest [11:11:35]: updating testbed package index (apt update) 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 74s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 74s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 74s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 74s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [868 kB] 74s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [81.1 kB] 74s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 74s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [149 kB] 74s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [3084 B] 74s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [107 kB] 74s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [324 B] 74s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [577 kB] 74s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [17.8 kB] 74s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [12.5 kB] 74s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [576 B] 77s Fetched 1938 kB in 1s (1496 kB/s) 78s Reading package lists... 79s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 79s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 79s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 79s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 81s Reading package lists... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 82s Calculating upgrade... 82s The following packages will be upgraded: 82s libpython3-stdlib python3 python3-minimal usbutils 82s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Need to get 144 kB of archives. 82s After this operation, 0 B of additional disk space will be used. 82s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-minimal arm64 3.13.7-2 [27.8 kB] 83s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3 arm64 3.13.7-2 [23.9 kB] 83s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 libpython3-stdlib arm64 3.13.7-2 [10.6 kB] 83s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 usbutils arm64 1:019-1 [81.7 kB] 83s dpkg-preconfigure: unable to re-open stdin: No such file or directory 83s Fetched 144 kB in 0s (373 kB/s) 84s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 84s Preparing to unpack .../python3-minimal_3.13.7-2_arm64.deb ... 84s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 84s Setting up python3-minimal (3.13.7-2) ... 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 85s Preparing to unpack .../python3_3.13.7-2_arm64.deb ... 85s running python pre-rtupdate hooks for python3.13... 85s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 85s Preparing to unpack .../libpython3-stdlib_3.13.7-2_arm64.deb ... 85s Unpacking libpython3-stdlib:arm64 (3.13.7-2) over (3.13.7-1) ... 85s Preparing to unpack .../usbutils_1%3a019-1_arm64.deb ... 85s Unpacking usbutils (1:019-1) over (1:018-2) ... 85s Setting up usbutils (1:019-1) ... 85s Setting up libpython3-stdlib:arm64 (3.13.7-2) ... 85s Setting up python3 (3.13.7-2) ... 85s running python rtupdate hooks for python3.13... 85s running python post-rtupdate hooks for python3.13... 86s Processing triggers for man-db (2.13.1-1) ... 88s autopkgtest [11:11:50]: upgrading testbed (apt dist-upgrade and autopurge) 88s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s Calculating upgrade... 90s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 91s Solving dependencies... 91s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s autopkgtest [11:11:57]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 09:50:31 UTC 2025 95s autopkgtest [11:11:57]: @@@@@@@@@@@@@@@@@@@@ apt-source python-loompy 98s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-loompy 3.0.7+dfsg-4 (dsc) [2506 B] 98s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-loompy 3.0.7+dfsg-4 (tar) [2266 kB] 98s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-loompy 3.0.7+dfsg-4 (diff) [6780 B] 98s gpgv: Signature made Sat May 17 17:48:22 2025 UTC 98s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 98s gpgv: issuer "tchet@debian.org" 98s gpgv: Can't check signature: No public key 98s dpkg-source: warning: cannot verify inline signature for ./python-loompy_3.0.7+dfsg-4.dsc: no acceptable signature found 99s autopkgtest [11:12:01]: testing package python-loompy version 3.0.7+dfsg-4 99s autopkgtest [11:12:01]: build not needed 101s autopkgtest [11:12:03]: test run-unit-test: preparing testbed 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 102s Solving dependencies... 102s The following NEW packages will be installed: 102s libaec0 libblas3 libgfortran5 libgomp1 libhdf5-310 libhdf5-hl-310 libhwloc15 102s liblapack3 liblzf1 libpfm4 libpython3.14-minimal libpython3.14-stdlib libsz2 102s libtbb12 libtbbbind-2-5 libtbbmalloc2 llvm-20 llvm-20-linker-tools 102s llvm-20-runtime python3-all python3-click python3-decorator python3-h5py 102s python3-h5py-serial python3-iniconfig python3-llvmlite python3-loompy 102s python3-numba python3-numpy python3-numpy-dev python3-numpy-groupies 102s python3-pandas python3-pandas-lib python3-pluggy python3-pytest python3-pytz 102s python3-scipy python3.14 python3.14-minimal 102s 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. 102s Need to get 92.3 MB of archives. 102s After this operation, 467 MB of additional disk space will be used. 102s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-numpy-dev arm64 1:2.3.4+ds-3ubuntu1 [145 kB] 103s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7 [181 kB] 103s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-7ubuntu1 [450 kB] 103s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7 [2300 kB] 103s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-numpy arm64 1:2.3.4+ds-3ubuntu1 [4575 kB] 103s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libpython3.14-minimal arm64 3.14.0-4 [903 kB] 103s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 python3.14-minimal arm64 3.14.0-4 [2543 kB] 103s Get:8 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.4-2 [22.2 kB] 103s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-7ubuntu1 [147 kB] 103s Get:10 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.4-2 [5258 B] 103s Get:11 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.5+repack-4 [1286 kB] 104s Get:12 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-4 [58.9 kB] 104s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhwloc15 arm64 2.12.2-1 [169 kB] 104s Get:14 http://ftpmaster.internal/ubuntu resolute/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 104s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libpython3.14-stdlib arm64 3.14.0-4 [2349 kB] 104s Get:16 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtbbbind-2-5 arm64 2022.1.0-3 [14.2 kB] 104s Get:17 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtbbmalloc2 arm64 2022.1.0-3 [39.2 kB] 104s Get:18 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtbb12 arm64 2022.1.0-3 [71.5 kB] 104s Get:19 http://ftpmaster.internal/ubuntu resolute/universe arm64 llvm-20-runtime arm64 1:20.1.8-0ubuntu6 [533 kB] 104s Get:20 http://ftpmaster.internal/ubuntu resolute/universe arm64 llvm-20-linker-tools arm64 1:20.1.8-0ubuntu6 [1248 kB] 104s Get:21 http://ftpmaster.internal/ubuntu resolute/universe arm64 libpfm4 arm64 4.13.0+git106-g3e4031b-1 [83.6 kB] 104s Get:22 http://ftpmaster.internal/ubuntu resolute/universe arm64 llvm-20 arm64 1:20.1.8-0ubuntu6 [18.8 MB] 104s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 python3.14 arm64 3.14.0-4 [805 kB] 104s Get:24 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-all arm64 3.13.7-2 [890 B] 104s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 104s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-decorator all 5.2.1-2 [28.1 kB] 104s Get:27 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-h5py-serial arm64 3.13.0-1ubuntu1 [1123 kB] 104s Get:28 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 104s Get:29 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-iniconfig all 2.1.0-1 [6840 B] 104s Get:30 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-llvmlite arm64 0.45.1-0ubuntu2 [23.4 MB] 105s Get:31 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-scipy arm64 1.15.3-1ubuntu1 [18.7 MB] 106s Get:32 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-numba arm64 0.61.2+dfsg-1 [1814 kB] 106s Get:33 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-numpy-groupies all 0.10.2-2 [32.1 kB] 106s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-pytz all 2025.2-4 [32.3 kB] 106s Get:35 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas-lib arm64 2.3.3+dfsg-1ubuntu1 [6979 kB] 106s Get:36 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas all 2.3.3+dfsg-1ubuntu1 [2948 kB] 106s Get:37 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-loompy arm64 3.0.7+dfsg-4 [41.7 kB] 106s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pluggy all 1.6.0-1 [21.0 kB] 106s Get:39 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pytest all 8.3.5-2 [252 kB] 107s Fetched 92.3 MB in 4s (23.0 MB/s) 107s Selecting previously unselected package python3-numpy-dev:arm64. 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 107s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_arm64.deb ... 107s Unpacking python3-numpy-dev:arm64 (1:2.3.4+ds-3ubuntu1) ... 107s Selecting previously unselected package libblas3:arm64. 107s Preparing to unpack .../01-libblas3_3.12.1-7_arm64.deb ... 107s Unpacking libblas3:arm64 (3.12.1-7) ... 107s Selecting previously unselected package libgfortran5:arm64. 107s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_arm64.deb ... 107s Unpacking libgfortran5:arm64 (15.2.0-7ubuntu1) ... 107s Selecting previously unselected package liblapack3:arm64. 107s Preparing to unpack .../03-liblapack3_3.12.1-7_arm64.deb ... 107s Unpacking liblapack3:arm64 (3.12.1-7) ... 107s Selecting previously unselected package python3-numpy. 107s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_arm64.deb ... 107s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 108s Selecting previously unselected package libpython3.14-minimal:arm64. 108s Preparing to unpack .../05-libpython3.14-minimal_3.14.0-4_arm64.deb ... 108s Unpacking libpython3.14-minimal:arm64 (3.14.0-4) ... 108s Selecting previously unselected package python3.14-minimal. 108s Preparing to unpack .../06-python3.14-minimal_3.14.0-4_arm64.deb ... 108s Unpacking python3.14-minimal (3.14.0-4) ... 108s Selecting previously unselected package libaec0:arm64. 108s Preparing to unpack .../07-libaec0_1.1.4-2_arm64.deb ... 108s Unpacking libaec0:arm64 (1.1.4-2) ... 108s Selecting previously unselected package libgomp1:arm64. 108s Preparing to unpack .../08-libgomp1_15.2.0-7ubuntu1_arm64.deb ... 108s Unpacking libgomp1:arm64 (15.2.0-7ubuntu1) ... 108s Selecting previously unselected package libsz2:arm64. 108s Preparing to unpack .../09-libsz2_1.1.4-2_arm64.deb ... 108s Unpacking libsz2:arm64 (1.1.4-2) ... 108s Selecting previously unselected package libhdf5-310:arm64. 108s Preparing to unpack .../10-libhdf5-310_1.14.5+repack-4_arm64.deb ... 108s Unpacking libhdf5-310:arm64 (1.14.5+repack-4) ... 108s Selecting previously unselected package libhdf5-hl-310:arm64. 108s Preparing to unpack .../11-libhdf5-hl-310_1.14.5+repack-4_arm64.deb ... 108s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-4) ... 108s Selecting previously unselected package libhwloc15:arm64. 108s Preparing to unpack .../12-libhwloc15_2.12.2-1_arm64.deb ... 108s Unpacking libhwloc15:arm64 (2.12.2-1) ... 108s Selecting previously unselected package liblzf1:arm64. 108s Preparing to unpack .../13-liblzf1_3.6-4_arm64.deb ... 108s Unpacking liblzf1:arm64 (3.6-4) ... 108s Selecting previously unselected package libpython3.14-stdlib:arm64. 108s Preparing to unpack .../14-libpython3.14-stdlib_3.14.0-4_arm64.deb ... 108s Unpacking libpython3.14-stdlib:arm64 (3.14.0-4) ... 109s Selecting previously unselected package libtbbbind-2-5:arm64. 109s Preparing to unpack .../15-libtbbbind-2-5_2022.1.0-3_arm64.deb ... 109s Unpacking libtbbbind-2-5:arm64 (2022.1.0-3) ... 109s Selecting previously unselected package libtbbmalloc2:arm64. 109s Preparing to unpack .../16-libtbbmalloc2_2022.1.0-3_arm64.deb ... 109s Unpacking libtbbmalloc2:arm64 (2022.1.0-3) ... 109s Selecting previously unselected package libtbb12:arm64. 109s Preparing to unpack .../17-libtbb12_2022.1.0-3_arm64.deb ... 109s Unpacking libtbb12:arm64 (2022.1.0-3) ... 109s Selecting previously unselected package llvm-20-runtime. 109s Preparing to unpack .../18-llvm-20-runtime_1%3a20.1.8-0ubuntu6_arm64.deb ... 109s Unpacking llvm-20-runtime (1:20.1.8-0ubuntu6) ... 109s Selecting previously unselected package llvm-20-linker-tools. 109s Preparing to unpack .../19-llvm-20-linker-tools_1%3a20.1.8-0ubuntu6_arm64.deb ... 109s Unpacking llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 109s Selecting previously unselected package libpfm4:arm64. 109s Preparing to unpack .../20-libpfm4_4.13.0+git106-g3e4031b-1_arm64.deb ... 109s Unpacking libpfm4:arm64 (4.13.0+git106-g3e4031b-1) ... 109s Selecting previously unselected package llvm-20. 109s Preparing to unpack .../21-llvm-20_1%3a20.1.8-0ubuntu6_arm64.deb ... 109s Unpacking llvm-20 (1:20.1.8-0ubuntu6) ... 110s Selecting previously unselected package python3.14. 110s Preparing to unpack .../22-python3.14_3.14.0-4_arm64.deb ... 110s Unpacking python3.14 (3.14.0-4) ... 110s Selecting previously unselected package python3-all. 110s Preparing to unpack .../23-python3-all_3.13.7-2_arm64.deb ... 110s Unpacking python3-all (3.13.7-2) ... 110s Selecting previously unselected package python3-click. 110s Preparing to unpack .../24-python3-click_8.2.0+0.really.8.1.8-1_all.deb ... 110s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ... 110s Selecting previously unselected package python3-decorator. 110s Preparing to unpack .../25-python3-decorator_5.2.1-2_all.deb ... 110s Unpacking python3-decorator (5.2.1-2) ... 110s Selecting previously unselected package python3-h5py-serial. 110s Preparing to unpack .../26-python3-h5py-serial_3.13.0-1ubuntu1_arm64.deb ... 110s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 110s Selecting previously unselected package python3-h5py. 110s Preparing to unpack .../27-python3-h5py_3.13.0-1ubuntu1_all.deb ... 110s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 110s Selecting previously unselected package python3-iniconfig. 110s Preparing to unpack .../28-python3-iniconfig_2.1.0-1_all.deb ... 110s Unpacking python3-iniconfig (2.1.0-1) ... 110s Selecting previously unselected package python3-llvmlite. 110s Preparing to unpack .../29-python3-llvmlite_0.45.1-0ubuntu2_arm64.deb ... 110s Unpacking python3-llvmlite (0.45.1-0ubuntu2) ... 112s Selecting previously unselected package python3-scipy. 112s Preparing to unpack .../30-python3-scipy_1.15.3-1ubuntu1_arm64.deb ... 112s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 113s Selecting previously unselected package python3-numba. 113s Preparing to unpack .../31-python3-numba_0.61.2+dfsg-1_arm64.deb ... 113s Unpacking python3-numba (0.61.2+dfsg-1) ... 113s Selecting previously unselected package python3-numpy-groupies. 113s Preparing to unpack .../32-python3-numpy-groupies_0.10.2-2_all.deb ... 113s Unpacking python3-numpy-groupies (0.10.2-2) ... 113s Selecting previously unselected package python3-pytz. 113s Preparing to unpack .../33-python3-pytz_2025.2-4_all.deb ... 113s Unpacking python3-pytz (2025.2-4) ... 113s Selecting previously unselected package python3-pandas-lib:arm64. 113s Preparing to unpack .../34-python3-pandas-lib_2.3.3+dfsg-1ubuntu1_arm64.deb ... 113s Unpacking python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 114s Selecting previously unselected package python3-pandas. 114s Preparing to unpack .../35-python3-pandas_2.3.3+dfsg-1ubuntu1_all.deb ... 114s Unpacking python3-pandas (2.3.3+dfsg-1ubuntu1) ... 114s Selecting previously unselected package python3-loompy. 114s Preparing to unpack .../36-python3-loompy_3.0.7+dfsg-4_arm64.deb ... 114s Unpacking python3-loompy (3.0.7+dfsg-4) ... 114s Selecting previously unselected package python3-pluggy. 114s Preparing to unpack .../37-python3-pluggy_1.6.0-1_all.deb ... 114s Unpacking python3-pluggy (1.6.0-1) ... 114s Selecting previously unselected package python3-pytest. 114s Preparing to unpack .../38-python3-pytest_8.3.5-2_all.deb ... 114s Unpacking python3-pytest (8.3.5-2) ... 114s Setting up python3-iniconfig (2.1.0-1) ... 115s Setting up libtbbmalloc2:arm64 (2022.1.0-3) ... 115s Setting up libpython3.14-minimal:arm64 (3.14.0-4) ... 115s Setting up llvm-20-runtime (1:20.1.8-0ubuntu6) ... 115s Setting up python3-pytz (2025.2-4) ... 115s Setting up libgomp1:arm64 (15.2.0-7ubuntu1) ... 115s Setting up python3-click (8.2.0+0.really.8.1.8-1) ... 116s Setting up libaec0:arm64 (1.1.4-2) ... 116s Setting up llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 116s Setting up python3-decorator (5.2.1-2) ... 116s Setting up libblas3:arm64 (3.12.1-7) ... 116s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 116s Setting up libpfm4:arm64 (4.13.0+git106-g3e4031b-1) ... 116s Setting up liblzf1:arm64 (3.6-4) ... 116s Setting up llvm-20 (1:20.1.8-0ubuntu6) ... 116s Setting up libhwloc15:arm64 (2.12.2-1) ... 116s Setting up python3-numpy-dev:arm64 (1:2.3.4+ds-3ubuntu1) ... 116s Setting up libgfortran5:arm64 (15.2.0-7ubuntu1) ... 116s Setting up python3-pluggy (1.6.0-1) ... 117s Setting up python3.14-minimal (3.14.0-4) ... 119s Setting up libsz2:arm64 (1.1.4-2) ... 119s Setting up liblapack3:arm64 (3.12.1-7) ... 119s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 119s Setting up libpython3.14-stdlib:arm64 (3.14.0-4) ... 119s Setting up python3-pytest (8.3.5-2) ... 120s Setting up libtbbbind-2-5:arm64 (2022.1.0-3) ... 120s Setting up python3-llvmlite (0.45.1-0ubuntu2) ... 121s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 128s Setting up libhdf5-310:arm64 (1.14.5+repack-4) ... 128s Setting up python3.14 (3.14.0-4) ... 130s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-4) ... 130s Setting up python3-scipy (1.15.3-1ubuntu1) ... 140s /usr/lib/python3/dist-packages/scipy/optimize/_optimize.py:921: SyntaxWarning: 'break' in a 'finally' block 140s break 145s Setting up python3-numpy-groupies (0.10.2-2) ... 145s Setting up python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 145s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 146s Setting up python3-all (3.13.7-2) ... 146s Setting up libtbb12:arm64 (2022.1.0-3) ... 146s Setting up python3-numba (0.61.2+dfsg-1) ... 146s update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode 157s Setting up python3-pandas (2.3.3+dfsg-1ubuntu1) ... 176s Setting up python3-h5py (3.13.0-1ubuntu1) ... 176s Setting up python3-loompy (3.0.7+dfsg-4) ... 177s Processing triggers for systemd (257.9-0ubuntu2) ... 177s Processing triggers for man-db (2.13.1-1) ... 178s Processing triggers for libc-bin (2.42-2ubuntu2) ... 179s autopkgtest [11:13:21]: test run-unit-test: [----------------------- 180s ============================= test session starts ============================== 180s platform linux -- Python 3.14.0, pytest-8.3.5, pluggy-1.6.0 -- /usr/bin/python3.14 180s cachedir: .pytest_cache 180s rootdir: /tmp/autopkgtest.MsaKYG/autopkgtest_tmp 180s plugins: typeguard-4.4.2 180s collecting ... collected 0 items / 5 errors 180s 180s ==================================== ERRORS ==================================== 180s _______________ ERROR collecting tests/test_attribute_manager.py _______________ 180s ImportError while importing test module '/tmp/autopkgtest.MsaKYG/autopkgtest_tmp/tests/test_attribute_manager.py'. 180s Hint: make sure your test modules/packages have valid Python names. 180s Traceback: 180s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 180s from . import _debian_h5py_serial as _h5py 180s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 180s from . import _errors 180s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 180s 180s During handling of the above exception, another exception occurred: 180s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 180s return _bootstrap._gcd_import(name[level:], package, level) 180s tests/test_attribute_manager.py:3: in 180s from loompy import AttributeManager 180s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 180s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 180s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 180s from h5py import File as HDF5File 180s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 180s from . import _debian_h5py_mpi as _h5py 180s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 180s __________________ ERROR collecting tests/test_connection.py ___________________ 180s ImportError while importing test module '/tmp/autopkgtest.MsaKYG/autopkgtest_tmp/tests/test_connection.py'. 180s Hint: make sure your test modules/packages have valid Python names. 180s Traceback: 180s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 180s from . import _debian_h5py_serial as _h5py 180s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 180s from . import _errors 180s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 180s 180s During handling of the above exception, another exception occurred: 180s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 180s return _bootstrap._gcd_import(name[level:], package, level) 180s tests/test_connection.py:6: in 180s import loompy 180s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 180s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 180s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 180s from h5py import File as HDF5File 180s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 180s from . import _debian_h5py_mpi as _h5py 180s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 180s ____________ ERROR collecting tests/test_file_attribute_manager.py _____________ 180s ImportError while importing test module '/tmp/autopkgtest.MsaKYG/autopkgtest_tmp/tests/test_file_attribute_manager.py'. 180s Hint: make sure your test modules/packages have valid Python names. 180s Traceback: 180s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 180s from . import _debian_h5py_serial as _h5py 180s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 180s from . import _errors 180s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 180s 180s During handling of the above exception, another exception occurred: 180s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 180s return _bootstrap._gcd_import(name[level:], package, level) 180s tests/test_file_attribute_manager.py:5: in 180s import h5py 180s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 180s from . import _debian_h5py_mpi as _h5py 180s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 180s _____________________ ERROR collecting tests/test_main.py ______________________ 180s ImportError while importing test module '/tmp/autopkgtest.MsaKYG/autopkgtest_tmp/tests/test_main.py'. 180s Hint: make sure your test modules/packages have valid Python names. 180s Traceback: 180s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 180s from . import _debian_h5py_serial as _h5py 180s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 180s from . import _errors 180s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 180s 180s During handling of the above exception, another exception occurred: 180s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 180s return _bootstrap._gcd_import(name[level:], package, level) 180s tests/test_main.py:1: in 180s import loompy 180s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 180s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 180s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 180s from h5py import File as HDF5File 180s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 180s from . import _debian_h5py_mpi as _h5py 180s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 180s ___________________ ERROR collecting tests/test_validator.py ___________________ 180s ImportError while importing test module '/tmp/autopkgtest.MsaKYG/autopkgtest_tmp/tests/test_validator.py'. 180s Hint: make sure your test modules/packages have valid Python names. 180s Traceback: 180s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 180s from . import _debian_h5py_serial as _h5py 180s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 180s from . import _errors 180s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 180s 180s During handling of the above exception, another exception occurred: 180s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 180s return _bootstrap._gcd_import(name[level:], package, level) 180s tests/test_validator.py:6: in 180s import loompy 180s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 180s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 180s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 180s from h5py import File as HDF5File 180s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 180s from . import _debian_h5py_mpi as _h5py 180s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 180s =========================== short test summary info ============================ 180s ERROR tests/test_attribute_manager.py 180s ERROR tests/test_connection.py 180s ERROR tests/test_file_attribute_manager.py 180s ERROR tests/test_main.py 180s ERROR tests/test_validator.py 180s !!!!!!!!!!!!!!!!!!! Interrupted: 5 errors during collection !!!!!!!!!!!!!!!!!!!! 180s ============================== 5 errors in 0.44s =============================== 181s autopkgtest [11:13:23]: test run-unit-test: -----------------------] 181s autopkgtest [11:13:23]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 181s run-unit-test FAIL non-zero exit status 2 182s autopkgtest [11:13:24]: test autodep8-python3: preparing testbed 204s Creating nova instance adt-resolute-arm64-python-loompy-20251117-111022-juju-7f2275-prod-proposed-migration-environment-2-93109377-25d5-4188-a2bb-26330ab5e3f4 from image adt/ubuntu-resolute-arm64-server-20251117.img (UUID 1cd33fbb-18df-4c5a-b8f0-2dcb25269485)... 262s autopkgtest [11:14:44]: testbed dpkg architecture: arm64 262s autopkgtest [11:14:44]: testbed apt version: 3.1.11 262s autopkgtest [11:14:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup 263s autopkgtest [11:14:45]: testbed release detected to be: resolute 263s autopkgtest [11:14:45]: updating testbed package index (apt update) 264s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 264s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 264s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 264s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 264s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [868 kB] 265s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [81.1 kB] 265s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 265s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 265s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [149 kB] 265s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [3084 B] 265s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [107 kB] 265s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [324 B] 265s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [577 kB] 265s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [17.8 kB] 265s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [12.5 kB] 265s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [576 B] 266s Fetched 1938 kB in 1s (1789 kB/s) 267s Reading package lists... 268s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 268s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 268s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 268s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 269s Reading package lists... 269s Reading package lists... 269s Building dependency tree... 269s Reading state information... 269s Calculating upgrade... 270s The following packages will be upgraded: 270s libpython3-stdlib python3 python3-minimal usbutils 270s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 270s Need to get 144 kB of archives. 270s After this operation, 0 B of additional disk space will be used. 270s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-minimal arm64 3.13.7-2 [27.8 kB] 270s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3 arm64 3.13.7-2 [23.9 kB] 270s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 libpython3-stdlib arm64 3.13.7-2 [10.6 kB] 270s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 usbutils arm64 1:019-1 [81.7 kB] 271s dpkg-preconfigure: unable to re-open stdin: No such file or directory 271s Fetched 144 kB in 0s (343 kB/s) 271s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 271s Preparing to unpack .../python3-minimal_3.13.7-2_arm64.deb ... 271s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 271s Setting up python3-minimal (3.13.7-2) ... 271s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 271s Preparing to unpack .../python3_3.13.7-2_arm64.deb ... 271s running python pre-rtupdate hooks for python3.13... 271s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 272s Preparing to unpack .../libpython3-stdlib_3.13.7-2_arm64.deb ... 272s Unpacking libpython3-stdlib:arm64 (3.13.7-2) over (3.13.7-1) ... 272s Preparing to unpack .../usbutils_1%3a019-1_arm64.deb ... 272s Unpacking usbutils (1:019-1) over (1:018-2) ... 272s Setting up usbutils (1:019-1) ... 272s Setting up libpython3-stdlib:arm64 (3.13.7-2) ... 272s Setting up python3 (3.13.7-2) ... 272s running python rtupdate hooks for python3.13... 272s running python post-rtupdate hooks for python3.13... 272s Processing triggers for man-db (2.13.1-1) ... 273s autopkgtest [11:14:55]: upgrading testbed (apt dist-upgrade and autopurge) 274s Reading package lists... 274s Building dependency tree... 274s Reading state information... 274s Calculating upgrade... 274s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 275s Reading package lists... 275s Building dependency tree... 275s Reading state information... 275s Solving dependencies... 275s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 279s Reading package lists... 279s Building dependency tree... 279s Reading state information... 279s Solving dependencies... 280s The following NEW packages will be installed: 280s libaec0 libblas3 libgfortran5 libgomp1 libhdf5-310 libhdf5-hl-310 libhwloc15 280s liblapack3 liblzf1 libpfm4 libpython3.14-minimal libpython3.14-stdlib libsz2 280s libtbb12 libtbbbind-2-5 libtbbmalloc2 llvm-20 llvm-20-linker-tools 280s llvm-20-runtime python3-all python3-click python3-decorator python3-h5py 280s python3-h5py-serial python3-llvmlite python3-loompy python3-numba 280s python3-numpy python3-numpy-dev python3-numpy-groupies python3-pandas 280s python3-pandas-lib python3-pytz python3-scipy python3.14 python3.14-minimal 280s 0 upgraded, 36 newly installed, 0 to remove and 0 not upgraded. 280s Need to get 92.0 MB of archives. 280s After this operation, 466 MB of additional disk space will be used. 280s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-numpy-dev arm64 1:2.3.4+ds-3ubuntu1 [145 kB] 280s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7 [181 kB] 280s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-7ubuntu1 [450 kB] 280s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7 [2300 kB] 281s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-numpy arm64 1:2.3.4+ds-3ubuntu1 [4575 kB] 282s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libpython3.14-minimal arm64 3.14.0-4 [903 kB] 282s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 python3.14-minimal arm64 3.14.0-4 [2543 kB] 282s Get:8 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.4-2 [22.2 kB] 282s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-7ubuntu1 [147 kB] 282s Get:10 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.4-2 [5258 B] 282s Get:11 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.5+repack-4 [1286 kB] 282s Get:12 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-4 [58.9 kB] 282s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhwloc15 arm64 2.12.2-1 [169 kB] 282s Get:14 http://ftpmaster.internal/ubuntu resolute/universe arm64 liblzf1 arm64 3.6-4 [7426 B] 282s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libpython3.14-stdlib arm64 3.14.0-4 [2349 kB] 282s Get:16 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtbbbind-2-5 arm64 2022.1.0-3 [14.2 kB] 282s Get:17 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtbbmalloc2 arm64 2022.1.0-3 [39.2 kB] 282s Get:18 http://ftpmaster.internal/ubuntu resolute/universe arm64 libtbb12 arm64 2022.1.0-3 [71.5 kB] 282s Get:19 http://ftpmaster.internal/ubuntu resolute/universe arm64 llvm-20-runtime arm64 1:20.1.8-0ubuntu6 [533 kB] 282s Get:20 http://ftpmaster.internal/ubuntu resolute/universe arm64 llvm-20-linker-tools arm64 1:20.1.8-0ubuntu6 [1248 kB] 282s Get:21 http://ftpmaster.internal/ubuntu resolute/universe arm64 libpfm4 arm64 4.13.0+git106-g3e4031b-1 [83.6 kB] 282s Get:22 http://ftpmaster.internal/ubuntu resolute/universe arm64 llvm-20 arm64 1:20.1.8-0ubuntu6 [18.8 MB] 283s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 python3.14 arm64 3.14.0-4 [805 kB] 283s Get:24 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-all arm64 3.13.7-2 [890 B] 283s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 283s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-decorator all 5.2.1-2 [28.1 kB] 283s Get:27 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-h5py-serial arm64 3.13.0-1ubuntu1 [1123 kB] 283s Get:28 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 283s Get:29 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-llvmlite arm64 0.45.1-0ubuntu2 [23.4 MB] 284s Get:30 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-scipy arm64 1.15.3-1ubuntu1 [18.7 MB] 285s Get:31 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-numba arm64 0.61.2+dfsg-1 [1814 kB] 285s Get:32 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-numpy-groupies all 0.10.2-2 [32.1 kB] 285s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-pytz all 2025.2-4 [32.3 kB] 285s Get:34 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas-lib arm64 2.3.3+dfsg-1ubuntu1 [6979 kB] 285s Get:35 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas all 2.3.3+dfsg-1ubuntu1 [2948 kB] 285s Get:36 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-loompy arm64 3.0.7+dfsg-4 [41.7 kB] 286s Fetched 92.0 MB in 6s (16.1 MB/s) 286s Selecting previously unselected package python3-numpy-dev:arm64. 286s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 286s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_arm64.deb ... 286s Unpacking python3-numpy-dev:arm64 (1:2.3.4+ds-3ubuntu1) ... 286s Selecting previously unselected package libblas3:arm64. 286s Preparing to unpack .../01-libblas3_3.12.1-7_arm64.deb ... 286s Unpacking libblas3:arm64 (3.12.1-7) ... 286s Selecting previously unselected package libgfortran5:arm64. 286s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_arm64.deb ... 286s Unpacking libgfortran5:arm64 (15.2.0-7ubuntu1) ... 286s Selecting previously unselected package liblapack3:arm64. 286s Preparing to unpack .../03-liblapack3_3.12.1-7_arm64.deb ... 286s Unpacking liblapack3:arm64 (3.12.1-7) ... 286s Selecting previously unselected package python3-numpy. 286s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_arm64.deb ... 286s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 286s Selecting previously unselected package libpython3.14-minimal:arm64. 287s Preparing to unpack .../05-libpython3.14-minimal_3.14.0-4_arm64.deb ... 287s Unpacking libpython3.14-minimal:arm64 (3.14.0-4) ... 287s Selecting previously unselected package python3.14-minimal. 287s Preparing to unpack .../06-python3.14-minimal_3.14.0-4_arm64.deb ... 287s Unpacking python3.14-minimal (3.14.0-4) ... 287s Selecting previously unselected package libaec0:arm64. 287s Preparing to unpack .../07-libaec0_1.1.4-2_arm64.deb ... 287s Unpacking libaec0:arm64 (1.1.4-2) ... 287s Selecting previously unselected package libgomp1:arm64. 287s Preparing to unpack .../08-libgomp1_15.2.0-7ubuntu1_arm64.deb ... 287s Unpacking libgomp1:arm64 (15.2.0-7ubuntu1) ... 287s Selecting previously unselected package libsz2:arm64. 287s Preparing to unpack .../09-libsz2_1.1.4-2_arm64.deb ... 287s Unpacking libsz2:arm64 (1.1.4-2) ... 287s Selecting previously unselected package libhdf5-310:arm64. 287s Preparing to unpack .../10-libhdf5-310_1.14.5+repack-4_arm64.deb ... 287s Unpacking libhdf5-310:arm64 (1.14.5+repack-4) ... 287s Selecting previously unselected package libhdf5-hl-310:arm64. 287s Preparing to unpack .../11-libhdf5-hl-310_1.14.5+repack-4_arm64.deb ... 287s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-4) ... 287s Selecting previously unselected package libhwloc15:arm64. 287s Preparing to unpack .../12-libhwloc15_2.12.2-1_arm64.deb ... 287s Unpacking libhwloc15:arm64 (2.12.2-1) ... 287s Selecting previously unselected package liblzf1:arm64. 287s Preparing to unpack .../13-liblzf1_3.6-4_arm64.deb ... 287s Unpacking liblzf1:arm64 (3.6-4) ... 287s Selecting previously unselected package libpython3.14-stdlib:arm64. 287s Preparing to unpack .../14-libpython3.14-stdlib_3.14.0-4_arm64.deb ... 287s Unpacking libpython3.14-stdlib:arm64 (3.14.0-4) ... 287s Selecting previously unselected package libtbbbind-2-5:arm64. 287s Preparing to unpack .../15-libtbbbind-2-5_2022.1.0-3_arm64.deb ... 287s Unpacking libtbbbind-2-5:arm64 (2022.1.0-3) ... 287s Selecting previously unselected package libtbbmalloc2:arm64. 287s Preparing to unpack .../16-libtbbmalloc2_2022.1.0-3_arm64.deb ... 287s Unpacking libtbbmalloc2:arm64 (2022.1.0-3) ... 287s Selecting previously unselected package libtbb12:arm64. 287s Preparing to unpack .../17-libtbb12_2022.1.0-3_arm64.deb ... 287s Unpacking libtbb12:arm64 (2022.1.0-3) ... 287s Selecting previously unselected package llvm-20-runtime. 287s Preparing to unpack .../18-llvm-20-runtime_1%3a20.1.8-0ubuntu6_arm64.deb ... 287s Unpacking llvm-20-runtime (1:20.1.8-0ubuntu6) ... 287s Selecting previously unselected package llvm-20-linker-tools. 287s Preparing to unpack .../19-llvm-20-linker-tools_1%3a20.1.8-0ubuntu6_arm64.deb ... 287s Unpacking llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 288s Selecting previously unselected package libpfm4:arm64. 288s Preparing to unpack .../20-libpfm4_4.13.0+git106-g3e4031b-1_arm64.deb ... 288s Unpacking libpfm4:arm64 (4.13.0+git106-g3e4031b-1) ... 288s Selecting previously unselected package llvm-20. 288s Preparing to unpack .../21-llvm-20_1%3a20.1.8-0ubuntu6_arm64.deb ... 288s Unpacking llvm-20 (1:20.1.8-0ubuntu6) ... 288s Selecting previously unselected package python3.14. 288s Preparing to unpack .../22-python3.14_3.14.0-4_arm64.deb ... 288s Unpacking python3.14 (3.14.0-4) ... 288s Selecting previously unselected package python3-all. 288s Preparing to unpack .../23-python3-all_3.13.7-2_arm64.deb ... 288s Unpacking python3-all (3.13.7-2) ... 288s Selecting previously unselected package python3-click. 288s Preparing to unpack .../24-python3-click_8.2.0+0.really.8.1.8-1_all.deb ... 288s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ... 288s Selecting previously unselected package python3-decorator. 288s Preparing to unpack .../25-python3-decorator_5.2.1-2_all.deb ... 288s Unpacking python3-decorator (5.2.1-2) ... 288s Selecting previously unselected package python3-h5py-serial. 288s Preparing to unpack .../26-python3-h5py-serial_3.13.0-1ubuntu1_arm64.deb ... 288s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 288s Selecting previously unselected package python3-h5py. 288s Preparing to unpack .../27-python3-h5py_3.13.0-1ubuntu1_all.deb ... 288s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 288s Selecting previously unselected package python3-llvmlite. 288s Preparing to unpack .../28-python3-llvmlite_0.45.1-0ubuntu2_arm64.deb ... 288s Unpacking python3-llvmlite (0.45.1-0ubuntu2) ... 289s Selecting previously unselected package python3-scipy. 289s Preparing to unpack .../29-python3-scipy_1.15.3-1ubuntu1_arm64.deb ... 289s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 290s Selecting previously unselected package python3-numba. 290s Preparing to unpack .../30-python3-numba_0.61.2+dfsg-1_arm64.deb ... 290s Unpacking python3-numba (0.61.2+dfsg-1) ... 290s Selecting previously unselected package python3-numpy-groupies. 290s Preparing to unpack .../31-python3-numpy-groupies_0.10.2-2_all.deb ... 290s Unpacking python3-numpy-groupies (0.10.2-2) ... 290s Selecting previously unselected package python3-pytz. 290s Preparing to unpack .../32-python3-pytz_2025.2-4_all.deb ... 290s Unpacking python3-pytz (2025.2-4) ... 290s Selecting previously unselected package python3-pandas-lib:arm64. 290s Preparing to unpack .../33-python3-pandas-lib_2.3.3+dfsg-1ubuntu1_arm64.deb ... 290s Unpacking python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 290s Selecting previously unselected package python3-pandas. 290s Preparing to unpack .../34-python3-pandas_2.3.3+dfsg-1ubuntu1_all.deb ... 290s Unpacking python3-pandas (2.3.3+dfsg-1ubuntu1) ... 291s Selecting previously unselected package python3-loompy. 291s Preparing to unpack .../35-python3-loompy_3.0.7+dfsg-4_arm64.deb ... 291s Unpacking python3-loompy (3.0.7+dfsg-4) ... 291s Setting up libtbbmalloc2:arm64 (2022.1.0-3) ... 291s Setting up libpython3.14-minimal:arm64 (3.14.0-4) ... 291s Setting up llvm-20-runtime (1:20.1.8-0ubuntu6) ... 291s Setting up python3-pytz (2025.2-4) ... 291s Setting up libgomp1:arm64 (15.2.0-7ubuntu1) ... 291s Setting up python3-click (8.2.0+0.really.8.1.8-1) ... 292s Setting up libaec0:arm64 (1.1.4-2) ... 292s Setting up llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 292s Setting up python3-decorator (5.2.1-2) ... 292s Setting up libblas3:arm64 (3.12.1-7) ... 292s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 292s Setting up libpfm4:arm64 (4.13.0+git106-g3e4031b-1) ... 292s Setting up liblzf1:arm64 (3.6-4) ... 292s Setting up llvm-20 (1:20.1.8-0ubuntu6) ... 292s Setting up libhwloc15:arm64 (2.12.2-1) ... 292s Setting up python3-numpy-dev:arm64 (1:2.3.4+ds-3ubuntu1) ... 292s Setting up libgfortran5:arm64 (15.2.0-7ubuntu1) ... 292s Setting up python3.14-minimal (3.14.0-4) ... 293s Setting up libsz2:arm64 (1.1.4-2) ... 293s Setting up liblapack3:arm64 (3.12.1-7) ... 293s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 293s Setting up libpython3.14-stdlib:arm64 (3.14.0-4) ... 293s Setting up libtbbbind-2-5:arm64 (2022.1.0-3) ... 293s Setting up python3-llvmlite (0.45.1-0ubuntu2) ... 294s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 298s Setting up libhdf5-310:arm64 (1.14.5+repack-4) ... 298s Setting up python3.14 (3.14.0-4) ... 299s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-4) ... 299s Setting up python3-scipy (1.15.3-1ubuntu1) ... 303s /usr/lib/python3/dist-packages/scipy/optimize/_optimize.py:921: SyntaxWarning: 'break' in a 'finally' block 303s break 306s Setting up python3-numpy-groupies (0.10.2-2) ... 306s Setting up python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 306s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 307s Setting up python3-all (3.13.7-2) ... 307s Setting up libtbb12:arm64 (2022.1.0-3) ... 307s Setting up python3-numba (0.61.2+dfsg-1) ... 307s update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode 312s Setting up python3-pandas (2.3.3+dfsg-1ubuntu1) ... 321s Setting up python3-h5py (3.13.0-1ubuntu1) ... 321s Setting up python3-loompy (3.0.7+dfsg-4) ... 322s Processing triggers for systemd (257.9-0ubuntu2) ... 322s Processing triggers for man-db (2.13.1-1) ... 322s Processing triggers for libc-bin (2.42-2ubuntu2) ... 325s autopkgtest [11:15:47]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import loompy; print(loompy)" ; done 325s autopkgtest [11:15:47]: test autodep8-python3: [----------------------- 325s Testing with python3.14: 325s Traceback (most recent call last): 325s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 24, in 325s from . import _debian_h5py_serial as _h5py 325s File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py", line 25, in 325s from . import _errors 325s ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 325s 325s During handling of the above exception, another exception occurred: 325s 325s Traceback (most recent call last): 325s File "", line 1, in 325s import loompy; print(loompy) 325s ^^^^^^^^^^^^^ 325s File "/usr/lib/python3/dist-packages/loompy/__init__.py", line 1, in 325s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 325s File "/usr/lib/python3/dist-packages/loompy/utils.py", line 4, in 325s from h5py import File as HDF5File 325s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 26, in 325s from . import _debian_h5py_mpi as _h5py 325s ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 326s autopkgtest [11:15:48]: test autodep8-python3: -----------------------] 326s autopkgtest [11:15:48]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 326s autodep8-python3 FAIL non-zero exit status 1 326s autopkgtest [11:15:48]: @@@@@@@@@@@@@@@@@@@@ summary 326s run-unit-test FAIL non-zero exit status 2 326s autodep8-python3 FAIL non-zero exit status 1