0s autopkgtest [20:50:32]: starting date and time: 2025-10-20 20:50:32+0000 0s autopkgtest [20:50:32]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [20:50:32]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yatwmynb/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:python-pluggy --apt-upgrade python-cai --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.4.2-1 python-pluggy/1.6.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-10.secgroup --name adt-resolute-arm64-python-cai-20251020-205032-juju-7f2275-prod-proposed-migration-environment-20-5b5a4278-f8df-4fbd-96f2-eac3c34ff78e --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-arm64-python-cai-20251020-205032-juju-7f2275-prod-proposed-migration-environment-20-5b5a4278-f8df-4fbd-96f2-eac3c34ff78e from image adt/ubuntu-resolute-arm64-server-20251020.img (UUID 53f7e888-0b33-40b7-be7f-09b2db152d64)... 75s autopkgtest [20:51:47]: testbed dpkg architecture: arm64 75s autopkgtest [20:51:47]: testbed apt version: 3.1.8ubuntu1 75s autopkgtest [20:51:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 76s autopkgtest [20:51:48]: testbed release detected to be: None 76s autopkgtest [20:51:48]: updating testbed package index (apt update) 77s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 77s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 77s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 77s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 77s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [59.3 kB] 77s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 77s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [14.3 kB] 77s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [646 kB] 78s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [115 kB] 78s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [43.8 kB] 78s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [409 kB] 78s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [5672 B] 78s Fetched 1382 kB in 1s (1263 kB/s) 79s Reading package lists... 80s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 80s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 80s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 80s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 82s Reading package lists... 82s Reading package lists... 83s Building dependency tree... 83s Reading state information... 83s Calculating upgrade... 83s The following packages will be upgraded: 83s libbrotli1 libjson-c5 python3-inflect python3-oauthlib python3-zipp 84s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 84s Need to get 512 kB of archives. 84s After this operation, 31.7 kB of additional disk space will be used. 84s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libjson-c5 arm64 0.18+ds-1.1 [37.5 kB] 84s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libbrotli1 arm64 1.1.0-2build6 [336 kB] 84s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-inflect all 7.5.0-1 [33.9 kB] 84s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-oauthlib all 3.3.1-1 [93.5 kB] 84s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-zipp all 3.23.0-1 [10.4 kB] 85s dpkg-preconfigure: unable to re-open stdin: No such file or directory 85s Fetched 512 kB in 1s (827 kB/s) 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83364 files and directories currently installed.) 85s Preparing to unpack .../libjson-c5_0.18+ds-1.1_arm64.deb ... 85s Unpacking libjson-c5:arm64 (0.18+ds-1.1) over (0.18+ds-1) ... 86s Preparing to unpack .../libbrotli1_1.1.0-2build6_arm64.deb ... 86s Unpacking libbrotli1:arm64 (1.1.0-2build6) over (1.1.0-2build5) ... 86s Preparing to unpack .../python3-inflect_7.5.0-1_all.deb ... 86s Unpacking python3-inflect (7.5.0-1) over (7.3.1-2) ... 86s Preparing to unpack .../python3-oauthlib_3.3.1-1_all.deb ... 86s Unpacking python3-oauthlib (3.3.1-1) over (3.2.2-3) ... 86s Preparing to unpack .../python3-zipp_3.23.0-1_all.deb ... 87s Unpacking python3-zipp (3.23.0-1) over (3.21.0-1) ... 87s Setting up libbrotli1:arm64 (1.1.0-2build6) ... 87s Setting up python3-zipp (3.23.0-1) ... 87s Setting up python3-inflect (7.5.0-1) ... 87s Setting up python3-oauthlib (3.3.1-1) ... 88s Setting up libjson-c5:arm64 (0.18+ds-1.1) ... 88s Processing triggers for libc-bin (2.42-0ubuntu3) ... 88s autopkgtest [20:52:00]: upgrading testbed (apt dist-upgrade and autopurge) 88s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s Calculating upgrade... 90s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Solving dependencies... 91s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s autopkgtest [20:52:06]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 09:50:31 UTC 2025 94s autopkgtest [20:52:06]: @@@@@@@@@@@@@@@@@@@@ apt-source python-cai 102s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-cai 1.0.4-1 (dsc) [2507 B] 102s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-cai 1.0.4-1 (tar) [37.9 MB] 102s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-cai 1.0.4-1 (diff) [3748 B] 103s gpgv: Signature made Wed Jan 15 15:08:32 2025 UTC 103s gpgv: using RSA key AC0A4FF12611B6FCCF01C111393587D97D86500B 103s gpgv: Can't check signature: No public key 103s dpkg-source: warning: cannot verify inline signature for ./python-cai_1.0.4-1.dsc: no acceptable signature found 104s autopkgtest [20:52:16]: testing package python-cai version 1.0.4-1 105s autopkgtest [20:52:17]: build not needed 107s autopkgtest [20:52:19]: test command1: preparing testbed 107s Reading package lists... 107s Building dependency tree... 107s Reading state information... 108s Solving dependencies... 108s The following NEW packages will be installed: 108s fontconfig-config fonts-urw-base35 libblas3 libcairo2 libdeflate0 108s libfontconfig1 libfontenc1 libgfortran5 libgomp1 libgraphite2-3 108s libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 108s libjs-sphinxdoc libjs-underscore liblapack3 liblcms2-2 liblerc4 libopenjp2-7 108s libpixman-1-0 libraqm0 libsharpyuv0 libtiff6 libwebp7 libwebpdemux2 108s libwebpmux3 libxcb-render0 libxcb-shm0 libxrender1 python-cai-doc 108s python3-biopython python3-cai python3-cairo python3-charset-normalizer 108s python3-click python3-decorator python3-freetype python3-iniconfig 108s python3-numpy python3-numpy-dev python3-packaging python3-pil python3-pluggy 108s python3-pytest python3-reportlab python3-rlpycairo python3-scipy sgml-base 108s w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 108s 0 upgraded, 56 newly installed, 0 to remove and 0 not upgraded. 108s Need to get 42.6 MB of archives. 108s After this operation, 156 MB of additional disk space will be used. 108s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1ubuntu1 [146 kB] 109s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-6build1 [186 kB] 109s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-5ubuntu1 [450 kB] 109s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-6build1 [2340 kB] 109s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-numpy arm64 1:2.2.4+ds-1ubuntu1 [3986 kB] 110s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontenc1 arm64 1:1.1.8-1build1 [13.9 kB] 110s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 110s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 110s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 xfonts-utils arm64 1:7.7+7 [95.6 kB] 110s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 fonts-urw-base35 all 20200910-8 [11.0 MB] 110s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 fontconfig-config arm64 2.15.0-2.3ubuntu1 [38.1 kB] 110s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libfontconfig1 arm64 2.15.0-2.3ubuntu1 [144 kB] 110s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 110s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-render0 arm64 1.17.0-2build1 [18.1 kB] 110s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libxcb-shm0 arm64 1.17.0-2build1 [6234 B] 110s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 110s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 libcairo2 arm64 1.18.4-1build1 [592 kB] 110s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 110s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-5ubuntu1 [148 kB] 110s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 110s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 libharfbuzz0b arm64 12.1.0-1 [523 kB] 110s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 libimagequant0 arm64 2.18.0-1build1 [37.1 kB] 110s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB] 110s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 110s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 110s Get:26 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 110s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 libjs-sphinxdoc all 8.2.3-1ubuntu2 [28.0 kB] 110s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 liblcms2-2 arm64 2.16-2 [170 kB] 110s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 110s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 libraqm0 arm64 0.10.3-1 [15.0 kB] 110s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 110s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 110s Get:33 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 110s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 libtiff6 arm64 4.7.0-3ubuntu3 [196 kB] 110s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebpdemux2 arm64 1.5.0-0.1 [12.5 kB] 110s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 libwebpmux3 arm64 1.5.0-0.1 [25.4 kB] 110s Get:37 http://ftpmaster.internal/ubuntu resolute/universe arm64 python-cai-doc all 1.0.4-1 [24.5 kB] 110s Get:38 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-charset-normalizer arm64 3.4.2-1 [125 kB] 110s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 libopenjp2-7 arm64 2.5.3-2.1 [179 kB] 110s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-pil arm64 11.3.0-1ubuntu1 [483 kB] 110s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-cairo arm64 1.27.0-2build1 [141 kB] 110s Get:42 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-freetype all 2.5.1-1 [92.3 kB] 110s Get:43 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-rlpycairo all 0.3.0-3 [9130 B] 110s Get:44 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-reportlab all 4.4.2-1 [1145 kB] 111s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 sgml-base all 1.31+nmu1 [11.0 kB] 111s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 xml-core all 0.19 [20.3 kB] 111s Get:47 http://ftpmaster.internal/ubuntu resolute/universe arm64 w3c-sgml-lib all 1.3-3 [280 kB] 111s Get:48 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-biopython arm64 1.85+dfsg-4 [1710 kB] 111s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 111s Get:50 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-decorator all 5.2.1-2 [28.1 kB] 111s Get:51 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-scipy arm64 1.15.3-1 [15.8 MB] 111s Get:52 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-cai all 1.0.4-1 [8790 B] 111s Get:53 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 111s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-packaging all 25.0-1 [52.8 kB] 111s Get:55 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 python3-pluggy all 1.6.0-1 [21.0 kB] 111s Get:56 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 python3-pytest all 8.4.2-1 [268 kB] 112s Fetched 42.6 MB in 3s (15.0 MB/s) 112s Selecting previously unselected package python3-numpy-dev:arm64. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83374 files and directories currently installed.) 112s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_arm64.deb ... 112s Unpacking python3-numpy-dev:arm64 (1:2.2.4+ds-1ubuntu1) ... 112s Selecting previously unselected package libblas3:arm64. 112s Preparing to unpack .../01-libblas3_3.12.1-6build1_arm64.deb ... 112s Unpacking libblas3:arm64 (3.12.1-6build1) ... 112s Selecting previously unselected package libgfortran5:arm64. 112s Preparing to unpack .../02-libgfortran5_15.2.0-5ubuntu1_arm64.deb ... 112s Unpacking libgfortran5:arm64 (15.2.0-5ubuntu1) ... 112s Selecting previously unselected package liblapack3:arm64. 112s Preparing to unpack .../03-liblapack3_3.12.1-6build1_arm64.deb ... 112s Unpacking liblapack3:arm64 (3.12.1-6build1) ... 112s Selecting previously unselected package python3-numpy. 112s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_arm64.deb ... 112s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 113s Selecting previously unselected package libfontenc1:arm64. 113s Preparing to unpack .../05-libfontenc1_1%3a1.1.8-1build1_arm64.deb ... 113s Unpacking libfontenc1:arm64 (1:1.1.8-1build1) ... 113s Selecting previously unselected package x11-common. 113s Preparing to unpack .../06-x11-common_1%3a7.7+24ubuntu1_all.deb ... 113s Unpacking x11-common (1:7.7+24ubuntu1) ... 113s Selecting previously unselected package xfonts-encodings. 113s Preparing to unpack .../07-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 113s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 113s Selecting previously unselected package xfonts-utils. 113s Preparing to unpack .../08-xfonts-utils_1%3a7.7+7_arm64.deb ... 113s Unpacking xfonts-utils (1:7.7+7) ... 113s Selecting previously unselected package fonts-urw-base35. 113s Preparing to unpack .../09-fonts-urw-base35_20200910-8_all.deb ... 113s Unpacking fonts-urw-base35 (20200910-8) ... 113s Selecting previously unselected package fontconfig-config. 113s Preparing to unpack .../10-fontconfig-config_2.15.0-2.3ubuntu1_arm64.deb ... 114s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 114s Selecting previously unselected package libfontconfig1:arm64. 114s Preparing to unpack .../11-libfontconfig1_2.15.0-2.3ubuntu1_arm64.deb ... 114s Unpacking libfontconfig1:arm64 (2.15.0-2.3ubuntu1) ... 114s Selecting previously unselected package libpixman-1-0:arm64. 114s Preparing to unpack .../12-libpixman-1-0_0.44.0-3_arm64.deb ... 114s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 114s Selecting previously unselected package libxcb-render0:arm64. 114s Preparing to unpack .../13-libxcb-render0_1.17.0-2build1_arm64.deb ... 114s Unpacking libxcb-render0:arm64 (1.17.0-2build1) ... 114s Selecting previously unselected package libxcb-shm0:arm64. 114s Preparing to unpack .../14-libxcb-shm0_1.17.0-2build1_arm64.deb ... 114s Unpacking libxcb-shm0:arm64 (1.17.0-2build1) ... 114s Selecting previously unselected package libxrender1:arm64. 114s Preparing to unpack .../15-libxrender1_1%3a0.9.12-1_arm64.deb ... 114s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 114s Selecting previously unselected package libcairo2:arm64. 114s Preparing to unpack .../16-libcairo2_1.18.4-1build1_arm64.deb ... 114s Unpacking libcairo2:arm64 (1.18.4-1build1) ... 114s Selecting previously unselected package libdeflate0:arm64. 114s Preparing to unpack .../17-libdeflate0_1.23-2_arm64.deb ... 114s Unpacking libdeflate0:arm64 (1.23-2) ... 114s Selecting previously unselected package libgomp1:arm64. 115s Preparing to unpack .../18-libgomp1_15.2.0-5ubuntu1_arm64.deb ... 115s Unpacking libgomp1:arm64 (15.2.0-5ubuntu1) ... 115s Selecting previously unselected package libgraphite2-3:arm64. 115s Preparing to unpack .../19-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 115s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 115s Selecting previously unselected package libharfbuzz0b:arm64. 115s Preparing to unpack .../20-libharfbuzz0b_12.1.0-1_arm64.deb ... 115s Unpacking libharfbuzz0b:arm64 (12.1.0-1) ... 115s Selecting previously unselected package libimagequant0:arm64. 115s Preparing to unpack .../21-libimagequant0_2.18.0-1build1_arm64.deb ... 115s Unpacking libimagequant0:arm64 (2.18.0-1build1) ... 115s Selecting previously unselected package libjpeg-turbo8:arm64. 115s Preparing to unpack .../22-libjpeg-turbo8_2.1.5-4ubuntu2_arm64.deb ... 115s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 115s Selecting previously unselected package libjpeg8:arm64. 115s Preparing to unpack .../23-libjpeg8_8c-2ubuntu11_arm64.deb ... 115s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 115s Selecting previously unselected package libjs-jquery. 115s Preparing to unpack .../24-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 115s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 115s Selecting previously unselected package libjs-underscore. 115s Preparing to unpack .../25-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 115s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 115s Selecting previously unselected package libjs-sphinxdoc. 115s Preparing to unpack .../26-libjs-sphinxdoc_8.2.3-1ubuntu2_all.deb ... 115s Unpacking libjs-sphinxdoc (8.2.3-1ubuntu2) ... 115s Selecting previously unselected package liblcms2-2:arm64. 115s Preparing to unpack .../27-liblcms2-2_2.16-2_arm64.deb ... 115s Unpacking liblcms2-2:arm64 (2.16-2) ... 115s Selecting previously unselected package liblerc4:arm64. 115s Preparing to unpack .../28-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 115s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 115s Selecting previously unselected package libraqm0:arm64. 115s Preparing to unpack .../29-libraqm0_0.10.3-1_arm64.deb ... 115s Unpacking libraqm0:arm64 (0.10.3-1) ... 115s Selecting previously unselected package libsharpyuv0:arm64. 115s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_arm64.deb ... 115s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 115s Selecting previously unselected package libjbig0:arm64. 115s Preparing to unpack .../31-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 115s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 115s Selecting previously unselected package libwebp7:arm64. 115s Preparing to unpack .../32-libwebp7_1.5.0-0.1_arm64.deb ... 115s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 115s Selecting previously unselected package libtiff6:arm64. 115s Preparing to unpack .../33-libtiff6_4.7.0-3ubuntu3_arm64.deb ... 115s Unpacking 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120s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 120s Setting up python3-packaging (25.0-1) ... 121s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 121s Setting up libimagequant0:arm64 (2.18.0-1build1) ... 121s Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1ubuntu1) ... 121s Setting up libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 121s Setting up libgfortran5:arm64 (15.2.0-5ubuntu1) ... 121s Setting up python3-pluggy (1.6.0-1) ... 121s Setting up libwebp7:arm64 (1.5.0-0.1) ... 121s Setting up libopenjp2-7:arm64 (2.5.3-2.1) ... 121s Setting up libharfbuzz0b:arm64 (12.1.0-1) ... 121s Setting up sgml-base (1.31+nmu1) ... 121s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 121s Setting up libwebpmux3:arm64 (1.5.0-0.1) ... 121s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 121s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 121s Setting up liblapack3:arm64 (3.12.1-6build1) ... 121s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 121s Setting up python3-pytest (8.4.2-1) ... 122s Setting up libwebpdemux2:arm64 (1.5.0-0.1) ... 122s Setting up xfonts-utils (1:7.7+7) ... 122s Setting up libraqm0:arm64 (0.10.3-1) ... 122s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 125s Setting up libjs-sphinxdoc (8.2.3-1ubuntu2) ... 125s Setting up libtiff6:arm64 (4.7.0-3ubuntu3) ... 125s Setting up xml-core (0.19) ... 126s Setting up python3-scipy (1.15.3-1) ... 133s Setting up python-cai-doc (1.0.4-1) ... 133s Setting up fonts-urw-base35 (20200910-8) ... 133s Setting up python3-pil:arm64 (11.3.0-1ubuntu1) ... 134s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 134s Setting up libfontconfig1:arm64 (2.15.0-2.3ubuntu1) ... 134s Setting up libcairo2:arm64 (1.18.4-1build1) ... 134s Setting up python3-cairo (1.27.0-2build1) ... 134s Setting up python3-rlpycairo (0.3.0-3) ... 135s Setting up python3-reportlab (4.4.2-1) ... 136s Processing triggers for libc-bin (2.42-0ubuntu3) ... 136s Processing triggers for man-db (2.13.1-1) ... 138s Processing triggers for sgml-base (1.31+nmu1) ... 138s Setting up w3c-sgml-lib (1.3-3) ... 193s Setting up python3-biopython (1.85+dfsg-4) ... 195s Setting up python3-cai (1.0.4-1) ... 196s autopkgtest [20:53:48]: test command1: pytest-3 196s autopkgtest [20:53:48]: test command1: [----------------------- 199s ============================= test session starts ============================== 199s platform linux -- Python 3.13.7, pytest-8.4.2, pluggy-1.6.0 199s rootdir: /tmp/autopkgtest.J6b1oE/build.UWP/src 199s plugins: typeguard-4.4.2 199s collected 16 items 199s 199s tests/test_cai.py ..... [ 31%] 199s tests/test_relative_adaptiveness.py .... [ 56%] 199s tests/test_rscu.py ...... [ 93%] 199s tests/test_sharp.py . [100%] 199s 199s =============================== warnings summary =============================== 199s tests/test_cai.py::test_only_non_synonymous 199s /usr/lib/python3/dist-packages/CAI/CAI.py:245: SmallSampleWarning: One or more sample arguments is too small; all returned values will be NaN. See documentation for sample size requirements. 199s return float(gmean(sequence_weights)) 199s 199s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 199s ======================== 16 passed, 1 warning in 1.47s ========================= 200s autopkgtest [20:53:52]: test command1: -----------------------] 201s autopkgtest [20:53:53]: test command1: - - - - - - - - - - results - - - - - - - - - - 201s command1 PASS 201s autopkgtest [20:53:53]: @@@@@@@@@@@@@@@@@@@@ summary 201s command1 PASS