0s autopkgtest [02:57:05]: starting date and time: 2025-11-14 02:57:05+0000 0s autopkgtest [02:57:05]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [02:57:05]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.akz0x06q/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade harmonypy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:2.3.4+ds-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-6.secgroup --name adt-resolute-arm64-harmonypy-20251114-025705-juju-7f2275-prod-proposed-migration-environment-20-0b182258-4e89-4159-ab40-2d7ba2516889 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-arm64-harmonypy-20251114-025705-juju-7f2275-prod-proposed-migration-environment-20-0b182258-4e89-4159-ab40-2d7ba2516889 from image adt/ubuntu-resolute-arm64-server-20251113.img (UUID bb6b080b-fe01-47ac-8db9-c672882a347d)... 65s autopkgtest [02:58:10]: testbed dpkg architecture: arm64 65s autopkgtest [02:58:10]: testbed apt version: 3.1.11 66s autopkgtest [02:58:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup 66s autopkgtest [02:58:11]: testbed release detected to be: None 67s autopkgtest [02:58:12]: updating testbed package index (apt update) 67s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 67s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 67s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 67s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 67s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 67s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [765 kB] 68s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.4 kB] 68s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [81.6 kB] 68s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [146 kB] 68s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [3056 B] 68s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [107 kB] 68s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [324 B] 68s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [439 kB] 68s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [13.1 kB] 68s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [12.0 kB] 68s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [516 B] 70s Fetched 1688 kB in 1s (1137 kB/s) 70s Reading package lists... 71s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 72s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 72s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 72s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 73s Reading package lists... 73s Reading package lists... 73s Building dependency tree... 73s Reading state information... 73s Calculating upgrade... 74s The following packages will be upgraded: 74s 3cpio cron cron-daemon-common libcap2 libcap2-bin libpam-cap liburcu8t64 74s libxml2-16 lto-disabled-list 74s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 74s Need to get 1163 kB of archives. 74s After this operation, 64.5 kB of additional disk space will be used. 74s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 cron arm64 3.0pl1-200ubuntu1 [87.4 kB] 74s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libcap2 arm64 1:2.75-10ubuntu1 [31.2 kB] 74s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libpam-cap arm64 1:2.75-10ubuntu1 [12.7 kB] 74s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libcap2-bin arm64 1:2.75-10ubuntu1 [32.8 kB] 74s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 libxml2-16 arm64 2.15.1+dfsg-0.3 [639 kB] 75s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 cron-daemon-common all 3.0pl1-200ubuntu1 [15.7 kB] 75s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 liburcu8t64 arm64 0.15.5-1 [64.5 kB] 75s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 3cpio arm64 0.12.0-1ubuntu1 [268 kB] 75s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 lto-disabled-list all 72 [12.4 kB] 75s dpkg-preconfigure: unable to re-open stdin: No such file or directory 75s Fetched 1163 kB in 1s (1330 kB/s) 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 76s Preparing to unpack .../cron_3.0pl1-200ubuntu1_arm64.deb ... 76s Unpacking cron (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 76s Preparing to unpack .../libcap2_1%3a2.75-10ubuntu1_arm64.deb ... 76s Unpacking libcap2:arm64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 76s Setting up libcap2:arm64 (1:2.75-10ubuntu1) ... 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88137 files and directories currently installed.) 76s Preparing to unpack .../0-libpam-cap_1%3a2.75-10ubuntu1_arm64.deb ... 77s Unpacking libpam-cap:arm64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 77s Preparing to unpack .../1-libcap2-bin_1%3a2.75-10ubuntu1_arm64.deb ... 77s Unpacking libcap2-bin (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 77s Preparing to unpack .../2-libxml2-16_2.15.1+dfsg-0.3_arm64.deb ... 77s Unpacking libxml2-16:arm64 (2.15.1+dfsg-0.3) over (2.14.5+dfsg-0.2build1) ... 77s Preparing to unpack .../3-cron-daemon-common_3.0pl1-200ubuntu1_all.deb ... 77s Unpacking cron-daemon-common (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 77s Preparing to unpack .../4-liburcu8t64_0.15.5-1_arm64.deb ... 77s Unpacking liburcu8t64:arm64 (0.15.5-1) over (0.15.4-1) ... 77s Preparing to unpack .../5-3cpio_0.12.0-1ubuntu1_arm64.deb ... 77s Unpacking 3cpio (0.12.0-1ubuntu1) over (0.11.0-2ubuntu2) ... 77s Preparing to unpack .../6-lto-disabled-list_72_all.deb ... 77s Unpacking lto-disabled-list (72) over (71) ... 78s Setting up liburcu8t64:arm64 (0.15.5-1) ... 78s Setting up 3cpio (0.12.0-1ubuntu1) ... 78s Setting up lto-disabled-list (72) ... 78s Setting up libxml2-16:arm64 (2.15.1+dfsg-0.3) ... 78s Setting up libcap2-bin (1:2.75-10ubuntu1) ... 78s Setting up libpam-cap:arm64 (1:2.75-10ubuntu1) ... 78s Setting up cron-daemon-common (3.0pl1-200ubuntu1) ... 78s Setting up cron (3.0pl1-200ubuntu1) ... 79s Processing triggers for libc-bin (2.42-2ubuntu2) ... 79s Processing triggers for man-db (2.13.1-1) ... 81s autopkgtest [02:58:26]: upgrading testbed (apt dist-upgrade and autopurge) 81s Reading package lists... 82s Building dependency tree... 82s Reading state information... 82s Calculating upgrade... 82s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 83s Solving dependencies... 84s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 84s autopkgtest [02:58:29]: rebooting testbed after setup commands that affected boot 114s autopkgtest [02:58:59]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 09:50:31 UTC 2025 116s autopkgtest [02:59:01]: @@@@@@@@@@@@@@@@@@@@ apt-source harmonypy 119s Get:1 http://ftpmaster.internal/ubuntu resolute/universe harmonypy 0.0.9-3.1 (dsc) [2236 B] 119s Get:2 http://ftpmaster.internal/ubuntu resolute/universe harmonypy 0.0.9-3.1 (tar) [1964 kB] 119s Get:3 http://ftpmaster.internal/ubuntu resolute/universe harmonypy 0.0.9-3.1 (diff) [3028 B] 119s gpgv: Signature made Sun May 4 18:13:25 2025 UTC 119s gpgv: using RSA key 73B299CBD4EEADDCC017E87A5BFFDCC258E69433 119s gpgv: Can't check signature: No public key 119s dpkg-source: warning: cannot verify inline signature for ./harmonypy_0.0.9-3.1.dsc: no acceptable signature found 119s autopkgtest [02:59:04]: testing package harmonypy version 0.0.9-3.1 119s autopkgtest [02:59:04]: build not needed 120s autopkgtest [02:59:05]: test command1: preparing testbed 120s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s Solving dependencies... 121s The following NEW packages will be installed: 121s libblas3 libgfortran5 libgomp1 liblapack3 python3-all python3-decorator 121s python3-harmonypy python3-joblib python3-numpy python3-numpy-dev 121s python3-pandas python3-pandas-lib python3-pytz python3-scipy python3-sklearn 121s python3-sklearn-lib python3-threadpoolctl 121s 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. 121s Need to get 45.4 MB of archives. 121s After this operation, 271 MB of additional disk space will be used. 121s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-numpy-dev arm64 1:2.3.4+ds-3ubuntu1 [145 kB] 122s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7 [181 kB] 122s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-7ubuntu1 [450 kB] 122s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7 [2300 kB] 123s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-numpy arm64 1:2.3.4+ds-3ubuntu1 [4575 kB] 124s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-7ubuntu1 [147 kB] 124s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-all arm64 3.13.7-1 [884 B] 124s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-decorator all 5.2.1-2 [28.1 kB] 124s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-pytz all 2025.2-4 [32.3 kB] 124s Get:10 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas-lib arm64 2.3.3+dfsg-1ubuntu1 [6979 kB] 124s Get:11 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas all 2.3.3+dfsg-1ubuntu1 [2948 kB] 125s Get:12 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-scipy arm64 1.15.3-1ubuntu1 [18.7 MB] 126s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-sklearn-lib arm64 1.7.2+dfsg-3ubuntu1 [6003 kB] 126s Get:14 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-joblib all 1.4.2-4 [205 kB] 126s Get:15 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] 126s Get:16 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-sklearn all 1.7.2+dfsg-3ubuntu1 [2616 kB] 126s Get:17 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-harmonypy all 0.0.9-3.1 [9858 B] 126s Fetched 45.4 MB in 5s (9817 kB/s) 126s Selecting previously unselected package python3-numpy-dev:arm64. 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 88136 files and directories currently installed.) 127s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_arm64.deb ... 127s Unpacking python3-numpy-dev:arm64 (1:2.3.4+ds-3ubuntu1) ... 127s Selecting previously unselected package libblas3:arm64. 127s Preparing to unpack .../01-libblas3_3.12.1-7_arm64.deb ... 127s Unpacking libblas3:arm64 (3.12.1-7) ... 127s Selecting previously unselected package libgfortran5:arm64. 127s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_arm64.deb ... 127s Unpacking libgfortran5:arm64 (15.2.0-7ubuntu1) ... 127s Selecting previously unselected package liblapack3:arm64. 127s Preparing to unpack .../03-liblapack3_3.12.1-7_arm64.deb ... 127s Unpacking liblapack3:arm64 (3.12.1-7) ... 127s Selecting previously unselected package python3-numpy. 127s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_arm64.deb ... 127s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 127s Selecting previously unselected package libgomp1:arm64. 127s Preparing to unpack .../05-libgomp1_15.2.0-7ubuntu1_arm64.deb ... 127s Unpacking libgomp1:arm64 (15.2.0-7ubuntu1) ... 127s Selecting previously unselected package python3-all. 127s Preparing to unpack .../06-python3-all_3.13.7-1_arm64.deb ... 127s Unpacking python3-all (3.13.7-1) ... 127s Selecting previously unselected package python3-decorator. 127s Preparing to unpack .../07-python3-decorator_5.2.1-2_all.deb ... 127s Unpacking python3-decorator (5.2.1-2) ... 127s Selecting previously unselected package python3-pytz. 127s Preparing to unpack .../08-python3-pytz_2025.2-4_all.deb ... 127s Unpacking python3-pytz (2025.2-4) ... 127s Selecting previously unselected package python3-pandas-lib:arm64. 127s Preparing to unpack .../09-python3-pandas-lib_2.3.3+dfsg-1ubuntu1_arm64.deb ... 127s Unpacking python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 128s Selecting previously unselected package python3-pandas. 128s Preparing to unpack .../10-python3-pandas_2.3.3+dfsg-1ubuntu1_all.deb ... 128s Unpacking python3-pandas (2.3.3+dfsg-1ubuntu1) ... 128s Selecting previously unselected package python3-scipy. 128s Preparing to unpack .../11-python3-scipy_1.15.3-1ubuntu1_arm64.deb ... 128s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 128s Selecting previously unselected package python3-sklearn-lib:arm64. 128s Preparing to unpack .../12-python3-sklearn-lib_1.7.2+dfsg-3ubuntu1_arm64.deb ... 128s Unpacking python3-sklearn-lib:arm64 (1.7.2+dfsg-3ubuntu1) ... 129s Selecting previously unselected package python3-joblib. 129s Preparing to unpack .../13-python3-joblib_1.4.2-4_all.deb ... 129s Unpacking python3-joblib (1.4.2-4) ... 129s Selecting previously unselected package python3-threadpoolctl. 129s Preparing to unpack .../14-python3-threadpoolctl_3.1.0-1_all.deb ... 129s Unpacking python3-threadpoolctl (3.1.0-1) ... 129s Selecting previously unselected package python3-sklearn. 129s Preparing to unpack .../15-python3-sklearn_1.7.2+dfsg-3ubuntu1_all.deb ... 129s Unpacking python3-sklearn (1.7.2+dfsg-3ubuntu1) ... 129s Selecting previously unselected package python3-harmonypy. 129s Preparing to unpack .../16-python3-harmonypy_0.0.9-3.1_all.deb ... 129s Unpacking python3-harmonypy (0.0.9-3.1) ... 129s Setting up python3-joblib (1.4.2-4) ... 129s Setting up python3-threadpoolctl (3.1.0-1) ... 129s Setting up python3-all (3.13.7-1) ... 129s Setting up python3-pytz (2025.2-4) ... 129s Setting up libgomp1:arm64 (15.2.0-7ubuntu1) ... 129s Setting up python3-decorator (5.2.1-2) ... 130s Setting up libblas3:arm64 (3.12.1-7) ... 130s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 130s Setting up python3-numpy-dev:arm64 (1:2.3.4+ds-3ubuntu1) ... 130s Setting up libgfortran5:arm64 (15.2.0-7ubuntu1) ... 130s Setting up liblapack3:arm64 (3.12.1-7) ... 130s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 130s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 132s Setting up python3-scipy (1.15.3-1ubuntu1) ... 136s Setting up python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 136s Setting up python3-sklearn-lib:arm64 (1.7.2+dfsg-3ubuntu1) ... 136s Setting up python3-pandas (2.3.3+dfsg-1ubuntu1) ... 141s Setting up python3-sklearn (1.7.2+dfsg-3ubuntu1) ... 143s Setting up python3-harmonypy (0.0.9-3.1) ... 144s Processing triggers for man-db (2.13.1-1) ... 144s Processing triggers for libc-bin (2.42-2ubuntu2) ... 145s autopkgtest [02:59:30]: test command1: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import harmonypy; print(harmonypy)" ; done 145s autopkgtest [02:59:30]: test command1: [----------------------- 146s Testing with python3.13: 147s 148s autopkgtest [02:59:33]: test command1: -----------------------] 148s autopkgtest [02:59:33]: test command1: - - - - - - - - - - results - - - - - - - - - - 148s command1 PASS (superficial) 149s autopkgtest [02:59:34]: @@@@@@@@@@@@@@@@@@@@ summary 149s command1 PASS (superficial)