0s autopkgtest [12:10:22]: starting date and time: 2025-11-01 12:10:22+0000 0s autopkgtest [12:10:22]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [12:10:22]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.bhkxc3_r/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:scipy --apt-upgrade harmonypy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=scipy/1.16.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-14.secgroup --name adt-resolute-arm64-harmonypy-20251101-121022-juju-7f2275-prod-proposed-migration-environment-20-d8c8cceb-1096-42f8-8e81-0f90130b0f6a --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-arm64-harmonypy-20251101-121022-juju-7f2275-prod-proposed-migration-environment-20-d8c8cceb-1096-42f8-8e81-0f90130b0f6a from image adt/ubuntu-resolute-arm64-server-20251101.img (UUID 895f8d05-65a0-4cf8-81a2-1a04d79b538c)... 58s autopkgtest [12:11:20]: testbed dpkg architecture: arm64 58s autopkgtest [12:11:20]: testbed apt version: 3.1.11 58s autopkgtest [12:11:20]: @@@@@@@@@@@@@@@@@@@@ test bed setup 58s autopkgtest [12:11:20]: testbed release detected to be: None 59s autopkgtest [12:11:21]: updating testbed package index (apt update) 60s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 60s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 60s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 60s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 60s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [138 kB] 60s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [49.4 kB] 60s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [2242 kB] 61s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 61s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [206 kB] 61s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [4948 B] 61s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [107 kB] 61s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [324 B] 61s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [1619 kB] 61s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [48.3 kB] 61s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [34.8 kB] 61s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [1700 B] 62s Fetched 4550 kB in 2s (2754 kB/s) 63s Reading package lists... 64s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 64s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 64s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 64s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 65s Reading package lists... 65s Reading package lists... 65s Building dependency tree... 65s Reading state information... 65s Calculating upgrade... 66s The following packages will be upgraded: 66s gcc-15-base libatomic1 libgcc-s1 libstdc++6 publicsuffix 66s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 66s Need to get 1027 kB of archives. 66s After this operation, 14.3 kB of additional disk space will be used. 66s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libatomic1 arm64 15.2.0-7ubuntu1 [11.2 kB] 66s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++6 arm64 15.2.0-7ubuntu1 [760 kB] 67s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-base arm64 15.2.0-7ubuntu1 [58.4 kB] 67s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-s1 arm64 15.2.0-7ubuntu1 [61.1 kB] 67s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 publicsuffix all 20251016.1743-0.1 [136 kB] 67s dpkg-preconfigure: unable to re-open stdin: No such file or directory 67s Fetched 1027 kB in 1s (1416 kB/s) 67s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83460 files and directories currently installed.) 67s Preparing to unpack .../libatomic1_15.2.0-7ubuntu1_arm64.deb ... 67s Unpacking libatomic1:arm64 (15.2.0-7ubuntu1) over (15.2.0-5ubuntu1) ... 67s Preparing to unpack .../libstdc++6_15.2.0-7ubuntu1_arm64.deb ... 67s Unpacking libstdc++6:arm64 (15.2.0-7ubuntu1) over (15.2.0-5ubuntu1) ... 68s Preparing to unpack .../gcc-15-base_15.2.0-7ubuntu1_arm64.deb ... 68s Unpacking gcc-15-base:arm64 (15.2.0-7ubuntu1) over (15.2.0-5ubuntu1) ... 68s Setting up gcc-15-base:arm64 (15.2.0-7ubuntu1) ... 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83460 files and directories currently installed.) 68s Preparing to unpack .../libgcc-s1_15.2.0-7ubuntu1_arm64.deb ... 68s Unpacking libgcc-s1:arm64 (15.2.0-7ubuntu1) over (15.2.0-5ubuntu1) ... 68s Setting up libgcc-s1:arm64 (15.2.0-7ubuntu1) ... 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83460 files and directories currently installed.) 68s Preparing to unpack .../publicsuffix_20251016.1743-0.1_all.deb ... 68s Unpacking publicsuffix (20251016.1743-0.1) over (20250328.1952-0.1) ... 68s Setting up libatomic1:arm64 (15.2.0-7ubuntu1) ... 68s Setting up publicsuffix (20251016.1743-0.1) ... 68s Setting up libstdc++6:arm64 (15.2.0-7ubuntu1) ... 68s Processing triggers for libc-bin (2.42-0ubuntu3) ... 68s autopkgtest [12:11:30]: upgrading testbed (apt dist-upgrade and autopurge) 68s Reading package lists... 69s Building dependency tree... 69s Reading state information... 69s Calculating upgrade... 69s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 69s Reading package lists... 70s Building dependency tree... 70s Reading state information... 70s Solving dependencies... 70s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 73s autopkgtest [12:11:35]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 09:50:31 UTC 2025 73s autopkgtest [12:11:35]: @@@@@@@@@@@@@@@@@@@@ apt-source harmonypy 75s Get:1 http://ftpmaster.internal/ubuntu resolute/universe harmonypy 0.0.9-3.1 (dsc) [2236 B] 75s Get:2 http://ftpmaster.internal/ubuntu resolute/universe harmonypy 0.0.9-3.1 (tar) [1964 kB] 75s Get:3 http://ftpmaster.internal/ubuntu resolute/universe harmonypy 0.0.9-3.1 (diff) [3028 B] 75s gpgv: Signature made Sun May 4 18:13:25 2025 UTC 75s gpgv: using RSA key 73B299CBD4EEADDCC017E87A5BFFDCC258E69433 75s gpgv: Can't check signature: No public key 75s dpkg-source: warning: cannot verify inline signature for ./harmonypy_0.0.9-3.1.dsc: no acceptable signature found 75s autopkgtest [12:11:37]: testing package harmonypy version 0.0.9-3.1 76s autopkgtest [12:11:38]: build not needed 76s autopkgtest [12:11:38]: test command1: preparing testbed 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 77s Solving dependencies... 77s The following NEW packages will be installed: 77s libblas3 libgfortran5 libgomp1 liblapack3 libqhull-r8.0 python3-all 77s python3-dateutil python3-decorator python3-harmonypy python3-joblib 77s python3-numpy python3-numpy-dev python3-pandas python3-pandas-lib 77s python3-pytz python3-scipy python3-sklearn python3-sklearn-lib 77s python3-threadpoolctl 78s 0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded. 78s Need to get 41.5 MB of archives. 78s After this operation, 232 MB of additional disk space will be used. 78s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1ubuntu1 [146 kB] 78s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-6build1 [186 kB] 78s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-7ubuntu1 [450 kB] 78s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-6build1 [2340 kB] 79s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-numpy arm64 1:2.2.4+ds-1ubuntu1 [3986 kB] 79s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-7ubuntu1 [147 kB] 79s Get:7 http://ftpmaster.internal/ubuntu resolute/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 79s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-all arm64 3.13.7-1 [884 B] 79s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-dateutil all 2.9.0-4 [80.3 kB] 79s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-decorator all 5.2.1-2 [28.1 kB] 79s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-pytz all 2025.2-4 [32.3 kB] 79s Get:12 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas-lib arm64 2.3.3+dfsg-1ubuntu1 [6979 kB] 80s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-pandas all 2.3.3+dfsg-1ubuntu1 [2948 kB] 81s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 python3-scipy arm64 1.16.3-1 [17.4 MB] 83s Get:15 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-joblib all 1.4.2-4 [205 kB] 83s Get:16 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] 83s Get:17 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-sklearn-lib arm64 1.4.2+dfsg-8 [4109 kB] 84s Get:18 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-sklearn all 1.4.2+dfsg-8 [2258 kB] 84s Get:19 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-harmonypy all 0.0.9-3.1 [9858 B] 85s Fetched 41.5 MB in 7s (5935 kB/s) 85s Selecting previously unselected package python3-numpy-dev:arm64. 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83460 files and directories currently installed.) 85s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_arm64.deb ... 85s Unpacking python3-numpy-dev:arm64 (1:2.2.4+ds-1ubuntu1) ... 85s Selecting previously unselected package libblas3:arm64. 85s Preparing to unpack .../01-libblas3_3.12.1-6build1_arm64.deb ... 85s Unpacking libblas3:arm64 (3.12.1-6build1) ... 85s Selecting previously unselected package libgfortran5:arm64. 85s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_arm64.deb ... 85s Unpacking libgfortran5:arm64 (15.2.0-7ubuntu1) ... 85s Selecting previously unselected package liblapack3:arm64. 85s Preparing to unpack .../03-liblapack3_3.12.1-6build1_arm64.deb ... 85s Unpacking liblapack3:arm64 (3.12.1-6build1) ... 85s Selecting previously unselected package python3-numpy. 85s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_arm64.deb ... 85s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 85s Selecting previously unselected package libgomp1:arm64. 85s Preparing to unpack .../05-libgomp1_15.2.0-7ubuntu1_arm64.deb ... 85s Unpacking libgomp1:arm64 (15.2.0-7ubuntu1) ... 85s Selecting previously unselected package libqhull-r8.0:arm64. 85s Preparing to unpack .../06-libqhull-r8.0_2020.2-6build1_arm64.deb ... 85s Unpacking libqhull-r8.0:arm64 (2020.2-6build1) ... 85s Selecting previously unselected package python3-all. 85s Preparing to unpack .../07-python3-all_3.13.7-1_arm64.deb ... 85s Unpacking python3-all (3.13.7-1) ... 85s Selecting previously unselected package python3-dateutil. 85s Preparing to unpack .../08-python3-dateutil_2.9.0-4_all.deb ... 85s Unpacking python3-dateutil (2.9.0-4) ... 85s Selecting previously unselected package python3-decorator. 85s Preparing to unpack .../09-python3-decorator_5.2.1-2_all.deb ... 85s Unpacking python3-decorator (5.2.1-2) ... 85s Selecting previously unselected package python3-pytz. 85s Preparing to unpack .../10-python3-pytz_2025.2-4_all.deb ... 85s Unpacking python3-pytz (2025.2-4) ... 85s Selecting previously unselected package python3-pandas-lib:arm64. 85s Preparing to unpack .../11-python3-pandas-lib_2.3.3+dfsg-1ubuntu1_arm64.deb ... 85s Unpacking python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 86s Selecting previously unselected package python3-pandas. 86s Preparing to unpack .../12-python3-pandas_2.3.3+dfsg-1ubuntu1_all.deb ... 86s Unpacking python3-pandas (2.3.3+dfsg-1ubuntu1) ... 86s Selecting previously unselected package python3-scipy. 86s Preparing to unpack .../13-python3-scipy_1.16.3-1_arm64.deb ... 86s Unpacking python3-scipy (1.16.3-1) ... 86s Selecting previously unselected package python3-joblib. 86s Preparing to unpack .../14-python3-joblib_1.4.2-4_all.deb ... 86s Unpacking python3-joblib (1.4.2-4) ... 86s Selecting previously unselected package python3-threadpoolctl. 86s Preparing to unpack .../15-python3-threadpoolctl_3.1.0-1_all.deb ... 86s Unpacking python3-threadpoolctl (3.1.0-1) ... 86s Selecting previously unselected package python3-sklearn-lib:arm64. 86s Preparing to unpack .../16-python3-sklearn-lib_1.4.2+dfsg-8_arm64.deb ... 86s Unpacking python3-sklearn-lib:arm64 (1.4.2+dfsg-8) ... 87s Selecting previously unselected package python3-sklearn. 87s Preparing to unpack .../17-python3-sklearn_1.4.2+dfsg-8_all.deb ... 87s Unpacking python3-sklearn (1.4.2+dfsg-8) ... 87s Selecting previously unselected package python3-harmonypy. 87s Preparing to unpack .../18-python3-harmonypy_0.0.9-3.1_all.deb ... 87s Unpacking python3-harmonypy (0.0.9-3.1) ... 87s Setting up python3-joblib (1.4.2-4) ... 87s Setting up python3-threadpoolctl (3.1.0-1) ... 87s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ... 87s Setting up python3-all (3.13.7-1) ... 87s Setting up python3-pytz (2025.2-4) ... 87s Setting up libgomp1:arm64 (15.2.0-7ubuntu1) ... 87s Setting up python3-decorator (5.2.1-2) ... 87s Setting up libblas3:arm64 (3.12.1-6build1) ... 87s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 87s Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1ubuntu1) ... 87s Setting up libgfortran5:arm64 (15.2.0-7ubuntu1) ... 87s Setting up python3-dateutil (2.9.0-4) ... 88s Setting up liblapack3:arm64 (3.12.1-6build1) ... 88s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 88s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 89s Setting up python3-scipy (1.16.3-1) ... 93s Setting up python3-pandas-lib:arm64 (2.3.3+dfsg-1ubuntu1) ... 93s Setting up python3-sklearn-lib:arm64 (1.4.2+dfsg-8) ... 93s Setting up python3-pandas (2.3.3+dfsg-1ubuntu1) ... 98s Setting up python3-sklearn (1.4.2+dfsg-8) ... 100s Setting up python3-harmonypy (0.0.9-3.1) ... 100s Processing triggers for man-db (2.13.1-1) ... 101s Processing triggers for libc-bin (2.42-0ubuntu3) ... 102s autopkgtest [12:12:04]: test command1: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import harmonypy; print(harmonypy)" ; done 102s autopkgtest [12:12:04]: test command1: [----------------------- 102s Testing with python3.13: 104s 104s autopkgtest [12:12:06]: test command1: -----------------------] 105s command1 PASS (superficial) 105s autopkgtest [12:12:07]: test command1: - - - - - - - - - - results - - - - - - - - - - 105s autopkgtest [12:12:07]: @@@@@@@@@@@@@@@@@@@@ summary 105s command1 PASS (superficial)