0s autopkgtest [16:20:59]: starting date and time: 2025-10-18 16:20:59+0000 0s autopkgtest [16:20:59]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [16:20:59]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.zkdr_y29/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade fast5 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.13.7-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-arm64-7.secgroup --name adt-resolute-arm64-fast5-20251018-162059-juju-7f2275-prod-proposed-migration-environment-15-21c7fe24-8168-47ee-b1c9-e0f85ef59d72 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-arm64-fast5-20251018-162059-juju-7f2275-prod-proposed-migration-environment-15-21c7fe24-8168-47ee-b1c9-e0f85ef59d72 from image adt/ubuntu-resolute-arm64-server-20251018.img (UUID f7a49384-4e4d-4350-9a26-1f59236f89dd)... 55s autopkgtest [16:21:54]: testbed dpkg architecture: arm64 55s autopkgtest [16:21:54]: testbed apt version: 3.1.6ubuntu2 56s autopkgtest [16:21:55]: @@@@@@@@@@@@@@@@@@@@ test bed setup 56s autopkgtest [16:21:55]: testbed release detected to be: None 57s autopkgtest [16:21:56]: updating testbed package index (apt update) 57s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 57s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 58s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 58s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 58s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [15.4 kB] 58s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 58s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [28.4 kB] 58s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [345 kB] 58s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [81.1 kB] 58s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [43.8 kB] 58s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [223 kB] 58s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [5672 B] 58s Fetched 831 kB in 1s (893 kB/s) 59s Reading package lists... 60s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 60s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 60s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 60s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 61s Reading package lists... 61s Reading package lists... 61s Building dependency tree... 61s Reading state information... 61s Calculating upgrade... 61s The following packages will be upgraded: 61s apt flash-kernel gir1.2-girepository-2.0 libapt-pkg7.0 libgirepository-1.0-1 61s libpython3-stdlib lto-disabled-list python3 python3-minimal 61s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 61s Need to get 2671 kB of archives. 61s After this operation, 66.6 kB of additional disk space will be used. 61s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-minimal arm64 3.13.7-2 [27.8 kB] 62s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3 arm64 3.13.7-2 [23.9 kB] 62s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 libpython3-stdlib arm64 3.13.7-2 [10.6 kB] 62s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libapt-pkg7.0 arm64 3.1.8ubuntu1 [1055 kB] 62s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 apt arm64 3.1.8ubuntu1 [1373 kB] 62s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libgirepository-1.0-1 arm64 1.86.0-6 [84.5 kB] 62s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 gir1.2-girepository-2.0 arm64 1.86.0-6 [25.3 kB] 62s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 flash-kernel arm64 3.109ubuntu7 [58.8 kB] 62s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 lto-disabled-list all 71 [12.5 kB] 63s dpkg-preconfigure: unable to re-open stdin: No such file or directory 63s Fetched 2671 kB in 1s (2231 kB/s) 63s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83359 files and directories currently installed.) 63s Preparing to unpack .../python3-minimal_3.13.7-2_arm64.deb ... 63s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 63s Setting up python3-minimal (3.13.7-2) ... 63s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83359 files and directories currently installed.) 63s Preparing to unpack .../0-python3_3.13.7-2_arm64.deb ... 63s running python pre-rtupdate hooks for python3.13... 63s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 64s Preparing to unpack .../1-libpython3-stdlib_3.13.7-2_arm64.deb ... 64s Unpacking libpython3-stdlib:arm64 (3.13.7-2) over (3.13.7-1) ... 64s Preparing to unpack .../2-libapt-pkg7.0_3.1.8ubuntu1_arm64.deb ... 64s Unpacking libapt-pkg7.0:arm64 (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 64s Preparing to unpack .../3-apt_3.1.8ubuntu1_arm64.deb ... 64s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 64s Preparing to unpack .../4-libgirepository-1.0-1_1.86.0-6_arm64.deb ... 64s Unpacking libgirepository-1.0-1:arm64 (1.86.0-6) over (1.84.0-1) ... 64s Preparing to unpack .../5-gir1.2-girepository-2.0_1.86.0-6_arm64.deb ... 64s Unpacking gir1.2-girepository-2.0:arm64 (1.86.0-6) over (1.84.0-1) ... 64s Preparing to unpack .../6-flash-kernel_3.109ubuntu7_arm64.deb ... 64s Unpacking flash-kernel (3.109ubuntu7) over (3.109ubuntu6) ... 64s Preparing to unpack .../7-lto-disabled-list_71_all.deb ... 64s Unpacking lto-disabled-list (71) over (69) ... 64s Setting up lto-disabled-list (71) ... 64s Setting up libgirepository-1.0-1:arm64 (1.86.0-6) ... 64s Setting up libapt-pkg7.0:arm64 (3.1.8ubuntu1) ... 64s Setting up libpython3-stdlib:arm64 (3.13.7-2) ... 64s Setting up apt (3.1.8ubuntu1) ... 65s Setting up python3 (3.13.7-2) ... 65s running python rtupdate hooks for python3.13... 65s running python post-rtupdate hooks for python3.13... 65s Setting up gir1.2-girepository-2.0:arm64 (1.86.0-6) ... 65s Setting up flash-kernel (3.109ubuntu7) ... 66s flash-kernel: deferring update (trigger activated) 66s Processing triggers for libc-bin (2.42-0ubuntu3) ... 66s Processing triggers for man-db (2.13.1-1) ... 67s Processing triggers for initramfs-tools (0.150ubuntu3) ... 67s update-initramfs: Generating /boot/initrd.img-6.17.0-5-generic 82s System running in EFI mode, skipping. 82s Processing triggers for flash-kernel (3.109ubuntu7) ... 82s System running in EFI mode, skipping. 82s autopkgtest [16:22:21]: upgrading testbed (apt dist-upgrade and autopurge) 83s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s Calculating upgrade... 84s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s Solving dependencies... 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 85s autopkgtest [16:22:24]: rebooting testbed after setup commands that affected boot 111s autopkgtest [16:22:50]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 09:50:31 UTC 2025 114s autopkgtest [16:22:53]: @@@@@@@@@@@@@@@@@@@@ apt-source fast5 116s Get:1 http://ftpmaster.internal/ubuntu resolute/universe fast5 0.6.5-9build2 (dsc) [2223 B] 116s Get:2 http://ftpmaster.internal/ubuntu resolute/universe fast5 0.6.5-9build2 (tar) [93.6 kB] 116s Get:3 http://ftpmaster.internal/ubuntu resolute/universe fast5 0.6.5-9build2 (diff) [5948 B] 117s gpgv: Signature made Tue Mar 4 17:14:46 2025 UTC 117s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 117s gpgv: Can't check signature: No public key 117s dpkg-source: warning: cannot verify inline signature for ./fast5_0.6.5-9build2.dsc: no acceptable signature found 117s autopkgtest [16:22:56]: testing package fast5 version 0.6.5-9build2 117s autopkgtest [16:22:56]: build not needed 118s autopkgtest [16:22:57]: test command1: preparing testbed 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Solving dependencies... 119s The following NEW packages will be installed: 119s build-essential comerr-dev cpp cpp-15 cpp-15-aarch64-linux-gnu 119s cpp-aarch64-linux-gnu g++ g++-15 g++-15-aarch64-linux-gnu 119s g++-aarch64-linux-gnu gcc gcc-15 gcc-15-aarch64-linux-gnu 119s gcc-aarch64-linux-gnu hdf5-helpers krb5-multidev libaec-dev libaec0 libasan8 119s libbrotli-dev libcc1-0 libcurl4-openssl-dev libevent-2.1-7t64 libfast5-dev 119s libgcc-15-dev libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 119s libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgssrpc4t64 libhdf5-310 119s libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 119s libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhwasan0 libidn2-dev libisl23 119s libitm1 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 119s libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkrb5-dev libldap-dev 119s liblsan0 libmpc3 libnghttp2-dev libp11-kit-dev libpkgconf3 libpsl-dev 119s librtmp-dev libssh2-1-dev libssl-dev libstdc++-15-dev libsz2 libtasn1-6-dev 119s libtsan2 libubsan1 libunbound8 libzstd-dev nettle-dev pkgconf pkgconf-bin 119s zlib1g-dev 119s 0 upgraded, 74 newly installed, 0 to remove and 0 not upgraded. 119s Need to get 81.3 MB of archives. 119s After this operation, 296 MB of additional disk space will be used. 119s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libisl23 arm64 0.27-1 [676 kB] 119s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libmpc3 arm64 1.3.1-1build3 [58.9 kB] 119s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-5ubuntu1 [11.7 MB] 122s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-15 arm64 15.2.0-5ubuntu1 [1028 B] 122s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [5736 B] 122s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 cpp arm64 4:15.2.0-4ubuntu1 [22.4 kB] 122s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libcc1-0 arm64 15.2.0-5ubuntu1 [49.2 kB] 122s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-5ubuntu1 [148 kB] 122s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 libitm1 arm64 15.2.0-5ubuntu1 [28.1 kB] 122s Get:10 http://ftpmaster.internal/ubuntu resolute/main arm64 libasan8 arm64 15.2.0-5ubuntu1 [2922 kB] 122s Get:11 http://ftpmaster.internal/ubuntu resolute/main arm64 liblsan0 arm64 15.2.0-5ubuntu1 [1316 kB] 122s Get:12 http://ftpmaster.internal/ubuntu resolute/main arm64 libtsan2 arm64 15.2.0-5ubuntu1 [2689 kB] 122s Get:13 http://ftpmaster.internal/ubuntu resolute/main arm64 libubsan1 arm64 15.2.0-5ubuntu1 [1176 kB] 122s Get:14 http://ftpmaster.internal/ubuntu resolute/main arm64 libhwasan0 arm64 15.2.0-5ubuntu1 [1639 kB] 122s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libgcc-15-dev arm64 15.2.0-5ubuntu1 [2601 kB] 123s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-5ubuntu1 [23.1 MB] 124s Get:17 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-15 arm64 15.2.0-5ubuntu1 [512 kB] 124s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [1206 B] 124s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 gcc arm64 4:15.2.0-4ubuntu1 [5016 B] 124s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 libstdc++-15-dev arm64 15.2.0-5ubuntu1 [2545 kB] 124s Get:21 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-5ubuntu1 [13.2 MB] 124s Get:22 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-15 arm64 15.2.0-5ubuntu1 [23.7 kB] 124s Get:23 http://ftpmaster.internal/ubuntu resolute/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4ubuntu1 [956 B] 124s Get:24 http://ftpmaster.internal/ubuntu resolute/main arm64 g++ arm64 4:15.2.0-4ubuntu1 [1080 B] 124s Get:25 http://ftpmaster.internal/ubuntu resolute/main arm64 build-essential arm64 12.12ubuntu1 [5082 B] 124s Get:26 http://ftpmaster.internal/ubuntu resolute/universe arm64 hdf5-helpers arm64 1.14.5+repack-3build1 [17.1 kB] 124s Get:27 http://ftpmaster.internal/ubuntu resolute/main arm64 comerr-dev arm64 2.1-1.47.2-3ubuntu2 [45.6 kB] 124s Get:28 http://ftpmaster.internal/ubuntu resolute/main arm64 libgssrpc4t64 arm64 1.21.3-5ubuntu2 [57.9 kB] 124s Get:29 http://ftpmaster.internal/ubuntu resolute/main arm64 libkadm5clnt-mit12 arm64 1.21.3-5ubuntu2 [39.7 kB] 124s Get:30 http://ftpmaster.internal/ubuntu resolute/main arm64 libkdb5-10t64 arm64 1.21.3-5ubuntu2 [40.9 kB] 124s Get:31 http://ftpmaster.internal/ubuntu resolute/main arm64 libkadm5srv-mit12 arm64 1.21.3-5ubuntu2 [54.2 kB] 124s Get:32 http://ftpmaster.internal/ubuntu resolute/main arm64 krb5-multidev arm64 1.21.3-5ubuntu2 [125 kB] 124s Get:33 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 124s Get:34 http://ftpmaster.internal/ubuntu resolute/main arm64 libbrotli-dev arm64 1.1.0-2build5 [360 kB] 124s Get:35 http://ftpmaster.internal/ubuntu resolute/main arm64 libidn2-dev arm64 2.3.8-4 [123 kB] 124s Get:36 http://ftpmaster.internal/ubuntu resolute/main arm64 libkrb5-dev arm64 1.21.3-5ubuntu2 [11.9 kB] 124s Get:37 http://ftpmaster.internal/ubuntu resolute/main arm64 libldap-dev arm64 2.6.10+dfsg-1ubuntu2 [331 kB] 124s Get:38 http://ftpmaster.internal/ubuntu resolute/main arm64 libpkgconf3 arm64 1.8.1-4build1 [33.7 kB] 124s Get:39 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf-bin arm64 1.8.1-4build1 [21.7 kB] 124s Get:40 http://ftpmaster.internal/ubuntu resolute/main arm64 pkgconf arm64 1.8.1-4build1 [16.8 kB] 124s Get:41 http://ftpmaster.internal/ubuntu resolute/main arm64 libnghttp2-dev arm64 1.64.0-1.1ubuntu1 [119 kB] 124s Get:42 http://ftpmaster.internal/ubuntu resolute/main arm64 libpsl-dev arm64 0.21.2-1.1build1 [77.2 kB] 124s Get:43 http://ftpmaster.internal/ubuntu resolute/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-5ubuntu1 [9944 B] 124s Get:44 http://ftpmaster.internal/ubuntu resolute/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-5ubuntu1 [348 kB] 124s Get:45 http://ftpmaster.internal/ubuntu resolute/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10build1 [152 kB] 124s Get:46 http://ftpmaster.internal/ubuntu resolute/main arm64 libunbound8 arm64 1.22.0-2ubuntu2 [448 kB] 124s Get:47 http://ftpmaster.internal/ubuntu resolute/main arm64 libgnutls-dane0t64 arm64 3.8.9-3ubuntu2 [25.0 kB] 124s Get:48 http://ftpmaster.internal/ubuntu resolute/main arm64 libgnutls-openssl27t64 arm64 3.8.9-3ubuntu2 [25.1 kB] 124s Get:49 http://ftpmaster.internal/ubuntu resolute/main arm64 libp11-kit-dev arm64 0.25.5-3ubuntu1 [23.5 kB] 125s Get:50 http://ftpmaster.internal/ubuntu resolute/main arm64 libtasn1-6-dev arm64 4.20.0-2build1 [93.6 kB] 125s Get:51 http://ftpmaster.internal/ubuntu resolute/main arm64 nettle-dev arm64 3.10.1-1 [1190 kB] 125s Get:52 http://ftpmaster.internal/ubuntu resolute/main arm64 libgnutls28-dev arm64 3.8.9-3ubuntu2 [1155 kB] 125s Get:53 http://ftpmaster.internal/ubuntu resolute/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu2 [899 kB] 125s Get:54 http://ftpmaster.internal/ubuntu resolute/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2build8 [73.9 kB] 125s Get:55 http://ftpmaster.internal/ubuntu resolute/main arm64 libssl-dev arm64 3.5.3-1ubuntu2 [3448 kB] 125s Get:56 http://ftpmaster.internal/ubuntu resolute/main arm64 libssh2-1-dev arm64 1.11.1-1build1 [292 kB] 125s Get:57 http://ftpmaster.internal/ubuntu resolute/main arm64 libzstd-dev arm64 1.5.7+dfsg-1build2 [363 kB] 125s Get:58 http://ftpmaster.internal/ubuntu resolute/main arm64 libcurl4-openssl-dev arm64 8.14.1-2ubuntu1 [535 kB] 125s Get:59 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 125s Get:60 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.5+repack-3build1 [1331 kB] 125s Get:61 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-5ubuntu1 [450 kB] 125s Get:62 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-fortran-310 arm64 1.14.5+repack-3build1 [109 kB] 125s Get:63 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3build1 [59.8 kB] 125s Get:64 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-3build1 [31.8 kB] 125s Get:65 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-cpp-310 arm64 1.14.5+repack-3build1 [117 kB] 125s Get:66 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-3build1 [11.6 kB] 125s Get:67 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8 arm64 2.1.5-4ubuntu2 [165 kB] 125s Get:68 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-turbo8-dev arm64 2.1.5-4ubuntu2 [306 kB] 125s Get:69 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 125s Get:70 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 125s Get:71 http://ftpmaster.internal/ubuntu resolute/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 125s Get:72 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec-dev arm64 1.1.3-1 [19.3 kB] 125s Get:73 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-dev arm64 1.14.5+repack-3build1 [3576 kB] 125s Get:74 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfast5-dev all 0.6.5-9build2 [50.5 kB] 125s Fetched 81.3 MB in 6s (12.5 MB/s) 125s Selecting previously unselected package libisl23:arm64. 126s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83359 files and directories currently installed.) 126s Preparing to unpack .../00-libisl23_0.27-1_arm64.deb ... 126s Unpacking libisl23:arm64 (0.27-1) ... 126s Selecting previously unselected package libmpc3:arm64. 126s Preparing to unpack .../01-libmpc3_1.3.1-1build3_arm64.deb ... 126s Unpacking libmpc3:arm64 (1.3.1-1build3) ... 126s Selecting previously unselected package cpp-15-aarch64-linux-gnu. 126s Preparing to unpack .../02-cpp-15-aarch64-linux-gnu_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking cpp-15-aarch64-linux-gnu (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package cpp-15. 126s Preparing to unpack .../03-cpp-15_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking cpp-15 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package cpp-aarch64-linux-gnu. 126s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 126s Unpacking cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 126s Selecting previously unselected package cpp. 126s Preparing to unpack .../05-cpp_4%3a15.2.0-4ubuntu1_arm64.deb ... 126s Unpacking cpp (4:15.2.0-4ubuntu1) ... 126s Selecting previously unselected package libcc1-0:arm64. 126s Preparing to unpack .../06-libcc1-0_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking libcc1-0:arm64 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package libgomp1:arm64. 126s Preparing to unpack .../07-libgomp1_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking libgomp1:arm64 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package libitm1:arm64. 126s Preparing to unpack .../08-libitm1_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking libitm1:arm64 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package libasan8:arm64. 126s Preparing to unpack .../09-libasan8_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking libasan8:arm64 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package liblsan0:arm64. 126s Preparing to unpack .../10-liblsan0_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking liblsan0:arm64 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package libtsan2:arm64. 126s Preparing to unpack .../11-libtsan2_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking libtsan2:arm64 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package libubsan1:arm64. 126s Preparing to unpack .../12-libubsan1_15.2.0-5ubuntu1_arm64.deb ... 126s Unpacking libubsan1:arm64 (15.2.0-5ubuntu1) ... 126s Selecting previously unselected package libhwasan0:arm64. 127s Preparing to unpack .../13-libhwasan0_15.2.0-5ubuntu1_arm64.deb ... 127s Unpacking libhwasan0:arm64 (15.2.0-5ubuntu1) ... 127s Selecting previously unselected package libgcc-15-dev:arm64. 127s Preparing to unpack .../14-libgcc-15-dev_15.2.0-5ubuntu1_arm64.deb ... 127s Unpacking libgcc-15-dev:arm64 (15.2.0-5ubuntu1) ... 127s Selecting previously unselected package gcc-15-aarch64-linux-gnu. 127s Preparing to unpack .../15-gcc-15-aarch64-linux-gnu_15.2.0-5ubuntu1_arm64.deb ... 127s Unpacking gcc-15-aarch64-linux-gnu (15.2.0-5ubuntu1) ... 127s Selecting previously unselected package gcc-15. 127s Preparing to unpack .../16-gcc-15_15.2.0-5ubuntu1_arm64.deb ... 127s Unpacking gcc-15 (15.2.0-5ubuntu1) ... 127s Selecting previously unselected package gcc-aarch64-linux-gnu. 127s Preparing to unpack .../17-gcc-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 127s Unpacking gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 127s Selecting previously unselected package gcc. 127s Preparing to unpack .../18-gcc_4%3a15.2.0-4ubuntu1_arm64.deb ... 127s Unpacking gcc (4:15.2.0-4ubuntu1) ... 127s Selecting previously unselected package libstdc++-15-dev:arm64. 127s Preparing to unpack .../19-libstdc++-15-dev_15.2.0-5ubuntu1_arm64.deb ... 127s Unpacking libstdc++-15-dev:arm64 (15.2.0-5ubuntu1) ... 127s Selecting previously unselected package g++-15-aarch64-linux-gnu. 127s Preparing to unpack .../20-g++-15-aarch64-linux-gnu_15.2.0-5ubuntu1_arm64.deb ... 127s Unpacking g++-15-aarch64-linux-gnu (15.2.0-5ubuntu1) ... 128s Selecting previously unselected package g++-15. 128s Preparing to unpack .../21-g++-15_15.2.0-5ubuntu1_arm64.deb ... 128s Unpacking g++-15 (15.2.0-5ubuntu1) ... 128s Selecting previously unselected package g++-aarch64-linux-gnu. 128s Preparing to unpack .../22-g++-aarch64-linux-gnu_4%3a15.2.0-4ubuntu1_arm64.deb ... 128s Unpacking g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 128s Selecting previously unselected package g++. 128s Preparing to unpack .../23-g++_4%3a15.2.0-4ubuntu1_arm64.deb ... 128s Unpacking g++ (4:15.2.0-4ubuntu1) ... 128s Selecting previously unselected package build-essential. 128s Preparing to unpack .../24-build-essential_12.12ubuntu1_arm64.deb ... 128s Unpacking build-essential (12.12ubuntu1) ... 128s Selecting previously unselected package hdf5-helpers. 128s Preparing to unpack .../25-hdf5-helpers_1.14.5+repack-3build1_arm64.deb ... 128s Unpacking hdf5-helpers (1.14.5+repack-3build1) ... 128s Selecting previously unselected package comerr-dev:arm64. 128s Preparing to unpack .../26-comerr-dev_2.1-1.47.2-3ubuntu2_arm64.deb ... 128s Unpacking comerr-dev:arm64 (2.1-1.47.2-3ubuntu2) ... 128s Selecting previously unselected package libgssrpc4t64:arm64. 128s Preparing to unpack .../27-libgssrpc4t64_1.21.3-5ubuntu2_arm64.deb ... 128s Unpacking libgssrpc4t64:arm64 (1.21.3-5ubuntu2) ... 128s Selecting previously unselected package libkadm5clnt-mit12:arm64. 128s Preparing to unpack .../28-libkadm5clnt-mit12_1.21.3-5ubuntu2_arm64.deb ... 128s Unpacking libkadm5clnt-mit12:arm64 (1.21.3-5ubuntu2) ... 128s Selecting previously unselected package libkdb5-10t64:arm64. 128s Preparing to unpack .../29-libkdb5-10t64_1.21.3-5ubuntu2_arm64.deb ... 128s Unpacking libkdb5-10t64:arm64 (1.21.3-5ubuntu2) ... 128s Selecting previously unselected package libkadm5srv-mit12:arm64. 128s Preparing to unpack .../30-libkadm5srv-mit12_1.21.3-5ubuntu2_arm64.deb ... 128s Unpacking libkadm5srv-mit12:arm64 (1.21.3-5ubuntu2) ... 128s Selecting previously unselected package krb5-multidev:arm64. 128s Preparing to unpack .../31-krb5-multidev_1.21.3-5ubuntu2_arm64.deb ... 128s Unpacking krb5-multidev:arm64 (1.21.3-5ubuntu2) ... 128s Selecting previously unselected package libaec0:arm64. 128s Preparing to unpack .../32-libaec0_1.1.3-1_arm64.deb ... 128s Unpacking libaec0:arm64 (1.1.3-1) ... 128s Selecting previously unselected package libbrotli-dev:arm64. 128s Preparing to unpack .../33-libbrotli-dev_1.1.0-2build5_arm64.deb ... 128s Unpacking libbrotli-dev:arm64 (1.1.0-2build5) ... 128s Selecting previously unselected package libidn2-dev:arm64. 128s Preparing to unpack .../34-libidn2-dev_2.3.8-4_arm64.deb ... 128s Unpacking libidn2-dev:arm64 (2.3.8-4) ... 128s Selecting previously unselected package libkrb5-dev:arm64. 128s Preparing to unpack .../35-libkrb5-dev_1.21.3-5ubuntu2_arm64.deb ... 128s Unpacking libkrb5-dev:arm64 (1.21.3-5ubuntu2) ... 128s Selecting previously unselected package libldap-dev:arm64. 128s Preparing to unpack .../36-libldap-dev_2.6.10+dfsg-1ubuntu2_arm64.deb ... 128s Unpacking libldap-dev:arm64 (2.6.10+dfsg-1ubuntu2) ... 128s Selecting previously unselected package libpkgconf3:arm64. 128s Preparing to unpack .../37-libpkgconf3_1.8.1-4build1_arm64.deb ... 128s Unpacking libpkgconf3:arm64 (1.8.1-4build1) ... 128s Selecting previously unselected package pkgconf-bin. 128s Preparing to unpack .../38-pkgconf-bin_1.8.1-4build1_arm64.deb ... 128s Unpacking pkgconf-bin (1.8.1-4build1) ... 128s Selecting previously unselected package pkgconf:arm64. 128s Preparing to unpack .../39-pkgconf_1.8.1-4build1_arm64.deb ... 128s Unpacking pkgconf:arm64 (1.8.1-4build1) ... 128s Selecting previously unselected package libnghttp2-dev:arm64. 128s Preparing to unpack .../40-libnghttp2-dev_1.64.0-1.1ubuntu1_arm64.deb ... 128s Unpacking libnghttp2-dev:arm64 (1.64.0-1.1ubuntu1) ... 128s Selecting previously unselected package libpsl-dev:arm64. 128s Preparing to unpack .../41-libpsl-dev_0.21.2-1.1build1_arm64.deb ... 128s Unpacking libpsl-dev:arm64 (0.21.2-1.1build1) ... 128s Selecting previously unselected package libgmpxx4ldbl:arm64. 128s Preparing to unpack .../42-libgmpxx4ldbl_2%3a6.3.0+dfsg-5ubuntu1_arm64.deb ... 128s Unpacking libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-5ubuntu1) ... 128s Selecting previously unselected package libgmp-dev:arm64. 128s Preparing to unpack .../43-libgmp-dev_2%3a6.3.0+dfsg-5ubuntu1_arm64.deb ... 128s Unpacking libgmp-dev:arm64 (2:6.3.0+dfsg-5ubuntu1) ... 128s Selecting previously unselected package libevent-2.1-7t64:arm64. 128s Preparing to unpack .../44-libevent-2.1-7t64_2.1.12-stable-10build1_arm64.deb ... 128s Unpacking libevent-2.1-7t64:arm64 (2.1.12-stable-10build1) ... 128s Selecting previously unselected package libunbound8:arm64. 128s Preparing to unpack .../45-libunbound8_1.22.0-2ubuntu2_arm64.deb ... 128s Unpacking libunbound8:arm64 (1.22.0-2ubuntu2) ... 128s Selecting previously unselected package libgnutls-dane0t64:arm64. 128s Preparing to unpack .../46-libgnutls-dane0t64_3.8.9-3ubuntu2_arm64.deb ... 128s Unpacking libgnutls-dane0t64:arm64 (3.8.9-3ubuntu2) ... 128s Selecting previously unselected package libgnutls-openssl27t64:arm64. 129s Preparing to unpack .../47-libgnutls-openssl27t64_3.8.9-3ubuntu2_arm64.deb ... 129s Unpacking libgnutls-openssl27t64:arm64 (3.8.9-3ubuntu2) ... 129s Selecting previously unselected package libp11-kit-dev:arm64. 129s Preparing to unpack .../48-libp11-kit-dev_0.25.5-3ubuntu1_arm64.deb ... 129s Unpacking libp11-kit-dev:arm64 (0.25.5-3ubuntu1) ... 129s Selecting previously unselected package libtasn1-6-dev:arm64. 129s Preparing to unpack .../49-libtasn1-6-dev_4.20.0-2build1_arm64.deb ... 129s Unpacking libtasn1-6-dev:arm64 (4.20.0-2build1) ... 129s Selecting previously unselected package nettle-dev:arm64. 129s Preparing to unpack .../50-nettle-dev_3.10.1-1_arm64.deb ... 129s Unpacking nettle-dev:arm64 (3.10.1-1) ... 129s Selecting previously unselected package libgnutls28-dev:arm64. 129s Preparing to unpack .../51-libgnutls28-dev_3.8.9-3ubuntu2_arm64.deb ... 129s Unpacking libgnutls28-dev:arm64 (3.8.9-3ubuntu2) ... 129s Selecting previously unselected package zlib1g-dev:arm64. 129s Preparing to unpack .../52-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_arm64.deb ... 129s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 129s Selecting previously unselected package librtmp-dev:arm64. 129s Preparing to unpack .../53-librtmp-dev_2.4+20151223.gitfa8646d.1-2build8_arm64.deb ... 129s Unpacking librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2build8) ... 129s Selecting previously unselected package libssl-dev:arm64. 129s Preparing to unpack .../54-libssl-dev_3.5.3-1ubuntu2_arm64.deb ... 129s Unpacking libssl-dev:arm64 (3.5.3-1ubuntu2) ... 129s Selecting previously unselected package libssh2-1-dev:arm64. 129s Preparing to unpack .../55-libssh2-1-dev_1.11.1-1build1_arm64.deb ... 129s Unpacking libssh2-1-dev:arm64 (1.11.1-1build1) ... 129s Selecting previously unselected package libzstd-dev:arm64. 129s Preparing to unpack .../56-libzstd-dev_1.5.7+dfsg-1build2_arm64.deb ... 129s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-1build2) ... 129s Selecting previously unselected package libcurl4-openssl-dev:arm64. 129s Preparing to unpack .../57-libcurl4-openssl-dev_8.14.1-2ubuntu1_arm64.deb ... 129s Unpacking libcurl4-openssl-dev:arm64 (8.14.1-2ubuntu1) ... 129s Selecting previously unselected package libsz2:arm64. 129s Preparing to unpack .../58-libsz2_1.1.3-1_arm64.deb ... 129s Unpacking libsz2:arm64 (1.1.3-1) ... 129s Selecting previously unselected package libhdf5-310:arm64. 129s Preparing to unpack .../59-libhdf5-310_1.14.5+repack-3build1_arm64.deb ... 129s Unpacking libhdf5-310:arm64 (1.14.5+repack-3build1) ... 129s Selecting previously unselected package libgfortran5:arm64. 129s Preparing to unpack .../60-libgfortran5_15.2.0-5ubuntu1_arm64.deb ... 129s Unpacking libgfortran5:arm64 (15.2.0-5ubuntu1) ... 129s Selecting previously unselected package libhdf5-fortran-310:arm64. 129s Preparing to unpack .../61-libhdf5-fortran-310_1.14.5+repack-3build1_arm64.deb ... 129s Unpacking libhdf5-fortran-310:arm64 (1.14.5+repack-3build1) ... 129s Selecting previously unselected package libhdf5-hl-310:arm64. 129s Preparing to unpack .../62-libhdf5-hl-310_1.14.5+repack-3build1_arm64.deb ... 129s Unpacking libhdf5-hl-310:arm64 (1.14.5+repack-3build1) ... 129s Selecting previously unselected package libhdf5-hl-fortran-310:arm64. 129s Preparing to unpack .../63-libhdf5-hl-fortran-310_1.14.5+repack-3build1_arm64.deb ... 129s Unpacking libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3build1) ... 129s Selecting previously unselected package libhdf5-cpp-310:arm64. 129s Preparing to unpack .../64-libhdf5-cpp-310_1.14.5+repack-3build1_arm64.deb ... 129s Unpacking libhdf5-cpp-310:arm64 (1.14.5+repack-3build1) ... 129s Selecting previously unselected package libhdf5-hl-cpp-310:arm64. 129s Preparing to unpack .../65-libhdf5-hl-cpp-310_1.14.5+repack-3build1_arm64.deb ... 129s Unpacking libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3build1) ... 129s Selecting previously unselected package libjpeg-turbo8:arm64. 129s Preparing to unpack .../66-libjpeg-turbo8_2.1.5-4ubuntu2_arm64.deb ... 129s Unpacking libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 129s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 129s Preparing to unpack .../67-libjpeg-turbo8-dev_2.1.5-4ubuntu2_arm64.deb ... 129s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu2) ... 129s Selecting previously unselected package libjpeg8:arm64. 129s Preparing to unpack .../68-libjpeg8_8c-2ubuntu11_arm64.deb ... 129s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 129s Selecting previously unselected package libjpeg8-dev:arm64. 129s Preparing to unpack .../69-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 129s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 129s Selecting previously unselected package libjpeg-dev:arm64. 129s Preparing to unpack .../70-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 129s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 130s Selecting previously unselected package libaec-dev:arm64. 130s Preparing to unpack .../71-libaec-dev_1.1.3-1_arm64.deb ... 130s Unpacking libaec-dev:arm64 (1.1.3-1) ... 130s Selecting previously unselected package libhdf5-dev. 130s Preparing to unpack .../72-libhdf5-dev_1.14.5+repack-3build1_arm64.deb ... 130s Unpacking libhdf5-dev (1.14.5+repack-3build1) ... 130s Selecting previously unselected package libfast5-dev. 130s Preparing to unpack .../73-libfast5-dev_0.6.5-9build2_all.deb ... 130s Unpacking libfast5-dev (0.6.5-9build2) ... 130s Setting up libgnutls-openssl27t64:arm64 (3.8.9-3ubuntu2) ... 130s Setting up libzstd-dev:arm64 (1.5.7+dfsg-1build2) ... 130s Setting up hdf5-helpers (1.14.5+repack-3build1) ... 130s Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10build1) ... 130s Setting up libgomp1:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libaec0:arm64 (1.1.3-1) ... 130s Setting up libpsl-dev:arm64 (0.21.2-1.1build1) ... 130s Setting up libunbound8:arm64 (1.22.0-2ubuntu2) ... 130s Setting up libpkgconf3:arm64 (1.8.1-4build1) ... 130s Setting up libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-5ubuntu1) ... 130s Setting up libgnutls-dane0t64:arm64 (3.8.9-3ubuntu2) ... 130s Setting up libgssrpc4t64:arm64 (1.21.3-5ubuntu2) ... 130s Setting up libldap-dev:arm64 (2.6.10+dfsg-1ubuntu2) ... 130s Setting up comerr-dev:arm64 (2.1-1.47.2-3ubuntu2) ... 130s Setting up libssl-dev:arm64 (3.5.3-1ubuntu2) ... 130s Setting up libmpc3:arm64 (1.3.1-1build3) ... 130s Setting up pkgconf-bin (1.8.1-4build1) ... 130s Setting up libjpeg-turbo8:arm64 (2.1.5-4ubuntu2) ... 130s Setting up libidn2-dev:arm64 (2.3.8-4) ... 130s Setting up libgfortran5:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libubsan1:arm64 (15.2.0-5ubuntu1) ... 130s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 130s Setting up libhwasan0:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libasan8:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libtsan2:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libisl23:arm64 (0.27-1) ... 130s Setting up libtasn1-6-dev:arm64 (4.20.0-2build1) ... 130s Setting up libcc1-0:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libbrotli-dev:arm64 (1.1.0-2build5) ... 130s Setting up liblsan0:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libp11-kit-dev:arm64 (0.25.5-3ubuntu1) ... 130s Setting up libsz2:arm64 (1.1.3-1) ... 130s Setting up libitm1:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libkadm5clnt-mit12:arm64 (1.21.3-5ubuntu2) ... 130s Setting up libjpeg8:arm64 (8c-2ubuntu11) ... 130s Setting up cpp-15-aarch64-linux-gnu (15.2.0-5ubuntu1) ... 130s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-4ubuntu2) ... 130s Setting up libgcc-15-dev:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-5ubuntu1) ... 130s Setting up nettle-dev:arm64 (3.10.1-1) ... 130s Setting up libkdb5-10t64:arm64 (1.21.3-5ubuntu2) ... 130s Setting up libaec-dev:arm64 (1.1.3-1) ... 130s Setting up pkgconf:arm64 (1.8.1-4build1) ... 130s Setting up cpp-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 130s Setting up libstdc++-15-dev:arm64 (15.2.0-5ubuntu1) ... 130s Setting up libssh2-1-dev:arm64 (1.11.1-1build1) ... 130s Setting up libhdf5-310:arm64 (1.14.5+repack-3build1) ... 130s Setting up cpp-15 (15.2.0-5ubuntu1) ... 130s Setting up cpp (4:15.2.0-4ubuntu1) ... 130s Setting up libkadm5srv-mit12:arm64 (1.21.3-5ubuntu2) ... 130s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 130s Setting up libhdf5-fortran-310:arm64 (1.14.5+repack-3build1) ... 130s Setting up krb5-multidev:arm64 (1.21.3-5ubuntu2) ... 130s Setting up libhdf5-cpp-310:arm64 (1.14.5+repack-3build1) ... 130s Setting up libgnutls28-dev:arm64 (3.8.9-3ubuntu2) ... 130s Setting up libnghttp2-dev:arm64 (1.64.0-1.1ubuntu1) ... 130s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3build1) ... 130s Setting up gcc-15-aarch64-linux-gnu (15.2.0-5ubuntu1) ... 130s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 130s Setting up libkrb5-dev:arm64 (1.21.3-5ubuntu2) ... 130s Setting up gcc-15 (15.2.0-5ubuntu1) ... 130s Setting up g++-15-aarch64-linux-gnu (15.2.0-5ubuntu1) ... 130s Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2build8) ... 130s Setting up g++-15 (15.2.0-5ubuntu1) ... 130s Setting up libhdf5-hl-cpp-310:arm64 (1.14.5+repack-3build1) ... 130s Setting up gcc-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 130s Setting up libhdf5-hl-fortran-310:arm64 (1.14.5+repack-3build1) ... 130s Setting up gcc (4:15.2.0-4ubuntu1) ... 130s Setting up libcurl4-openssl-dev:arm64 (8.14.1-2ubuntu1) ... 130s Setting up libhdf5-dev (1.14.5+repack-3build1) ... 130s update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 130s Setting up g++-aarch64-linux-gnu (4:15.2.0-4ubuntu1) ... 130s Setting up libfast5-dev (0.6.5-9build2) ... 130s Setting up g++ (4:15.2.0-4ubuntu1) ... 130s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 130s Setting up build-essential (12.12ubuntu1) ... 130s Processing triggers for libc-bin (2.42-0ubuntu3) ... 130s Processing triggers for man-db (2.13.1-1) ... 131s Processing triggers for install-info (7.1.1-1ubuntu1) ... 132s autopkgtest [16:23:11]: test command1: cp /usr/share/doc/libfast5-dev/examples/* $AUTOPKGTEST_TMP && cd $AUTOPKGTEST_TMP && make FAST5_DIR=/usr/include HDF5_INCLUDE_DIR=/usr/include/hdf5/serial HDF5_LIB_DIR=/usr/lib/$(gcc -print-multiarch)/hdf5/serial 132s autopkgtest [16:23:11]: test command1: [----------------------- 132s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o f5ls f5ls.cpp -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 139s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o f5ls-full f5ls-full.cpp -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 146s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o hdf5-mod hdf5-mod.cpp -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 150s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o f5-mod f5-mod.cpp -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 156s autopkgtest [16:23:35]: test command1: -----------------------] 157s command1 PASS 157s autopkgtest [16:23:36]: test command1: - - - - - - - - - - results - - - - - - - - - - 157s autopkgtest [16:23:36]: test command2: preparing testbed 178s Creating nova instance adt-resolute-arm64-fast5-20251018-162059-juju-7f2275-prod-proposed-migration-environment-15-21c7fe24-8168-47ee-b1c9-e0f85ef59d72 from image adt/ubuntu-resolute-arm64-server-20251018.img (UUID f7a49384-4e4d-4350-9a26-1f59236f89dd)... 244s autopkgtest [16:25:03]: testbed dpkg architecture: arm64 244s autopkgtest [16:25:03]: testbed apt version: 3.1.6ubuntu2 245s autopkgtest [16:25:04]: @@@@@@@@@@@@@@@@@@@@ test bed setup 245s autopkgtest [16:25:04]: testbed release detected to be: resolute 246s autopkgtest [16:25:05]: updating testbed package index (apt update) 246s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 247s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 247s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 247s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 247s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [15.4 kB] 247s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 247s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [345 kB] 247s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [28.4 kB] 247s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [81.1 kB] 247s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [43.8 kB] 247s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [223 kB] 247s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [5672 B] 247s Fetched 831 kB in 1s (706 kB/s) 248s Reading package lists... 249s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 249s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 249s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 250s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 251s Reading package lists... 251s Reading package lists... 251s Building dependency tree... 251s Reading state information... 251s Calculating upgrade... 252s The following packages will be upgraded: 252s apt flash-kernel gir1.2-girepository-2.0 libapt-pkg7.0 libgirepository-1.0-1 252s libpython3-stdlib lto-disabled-list python3 python3-minimal 252s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 252s Need to get 2671 kB of archives. 252s After this operation, 66.6 kB of additional disk space will be used. 252s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3-minimal arm64 3.13.7-2 [27.8 kB] 252s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 python3 arm64 3.13.7-2 [23.9 kB] 252s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 libpython3-stdlib arm64 3.13.7-2 [10.6 kB] 252s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libapt-pkg7.0 arm64 3.1.8ubuntu1 [1055 kB] 253s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 apt arm64 3.1.8ubuntu1 [1373 kB] 253s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 libgirepository-1.0-1 arm64 1.86.0-6 [84.5 kB] 253s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 gir1.2-girepository-2.0 arm64 1.86.0-6 [25.3 kB] 253s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 flash-kernel arm64 3.109ubuntu7 [58.8 kB] 253s Get:9 http://ftpmaster.internal/ubuntu resolute/main arm64 lto-disabled-list all 71 [12.5 kB] 254s dpkg-preconfigure: unable to re-open stdin: No such file or directory 254s Fetched 2671 kB in 2s (1462 kB/s) 254s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83359 files and directories currently installed.) 254s Preparing to unpack .../python3-minimal_3.13.7-2_arm64.deb ... 254s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 254s Setting up python3-minimal (3.13.7-2) ... 255s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83359 files and directories currently installed.) 255s Preparing to unpack .../0-python3_3.13.7-2_arm64.deb ... 255s running python pre-rtupdate hooks for python3.13... 255s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 255s Preparing to unpack .../1-libpython3-stdlib_3.13.7-2_arm64.deb ... 255s Unpacking libpython3-stdlib:arm64 (3.13.7-2) over (3.13.7-1) ... 255s Preparing to unpack .../2-libapt-pkg7.0_3.1.8ubuntu1_arm64.deb ... 255s Unpacking libapt-pkg7.0:arm64 (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 255s Preparing to unpack .../3-apt_3.1.8ubuntu1_arm64.deb ... 255s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 256s Preparing to unpack .../4-libgirepository-1.0-1_1.86.0-6_arm64.deb ... 256s Unpacking libgirepository-1.0-1:arm64 (1.86.0-6) over (1.84.0-1) ... 256s Preparing to unpack .../5-gir1.2-girepository-2.0_1.86.0-6_arm64.deb ... 256s Unpacking gir1.2-girepository-2.0:arm64 (1.86.0-6) over (1.84.0-1) ... 256s Preparing to unpack .../6-flash-kernel_3.109ubuntu7_arm64.deb ... 256s Unpacking flash-kernel (3.109ubuntu7) over (3.109ubuntu6) ... 256s Preparing to unpack .../7-lto-disabled-list_71_all.deb ... 256s Unpacking lto-disabled-list (71) over (69) ... 256s Setting up lto-disabled-list (71) ... 256s Setting up libgirepository-1.0-1:arm64 (1.86.0-6) ... 256s Setting up libapt-pkg7.0:arm64 (3.1.8ubuntu1) ... 256s Setting up libpython3-stdlib:arm64 (3.13.7-2) ... 256s Setting up apt (3.1.8ubuntu1) ... 257s Setting up python3 (3.13.7-2) ... 257s running python rtupdate hooks for python3.13... 257s running python post-rtupdate hooks for python3.13... 257s Setting up gir1.2-girepository-2.0:arm64 (1.86.0-6) ... 257s Setting up flash-kernel (3.109ubuntu7) ... 258s flash-kernel: deferring update (trigger activated) 258s Processing triggers for libc-bin (2.42-0ubuntu3) ... 258s Processing triggers for man-db (2.13.1-1) ... 260s Processing triggers for initramfs-tools (0.150ubuntu3) ... 260s update-initramfs: Generating /boot/initrd.img-6.17.0-5-generic 286s System running in EFI mode, skipping. 286s Processing triggers for flash-kernel (3.109ubuntu7) ... 286s System running in EFI mode, skipping. 287s autopkgtest [16:25:46]: upgrading testbed (apt dist-upgrade and autopurge) 288s Reading package lists... 288s Building dependency tree... 288s Reading state information... 289s Calculating upgrade... 290s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 290s Reading package lists... 290s Building dependency tree... 290s Reading state information... 290s Solving dependencies... 291s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 291s autopkgtest [16:25:50]: rebooting testbed after setup commands that affected boot 321s Reading package lists... 321s Building dependency tree... 321s Reading state information... 321s Solving dependencies... 321s The following NEW packages will be installed: 321s libaec0 libhdf5-310 libsz2 python3-fast5 322s 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 322s Need to get 1609 kB of archives. 322s After this operation, 5488 kB of additional disk space will be used. 322s Get:1 http://ftpmaster.internal/ubuntu resolute/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB] 322s Get:2 http://ftpmaster.internal/ubuntu resolute/universe arm64 libsz2 arm64 1.1.3-1 [5254 B] 322s Get:3 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhdf5-310 arm64 1.14.5+repack-3build1 [1331 kB] 323s Get:4 http://ftpmaster.internal/ubuntu resolute/universe arm64 python3-fast5 arm64 0.6.5-9build2 [251 kB] 323s Fetched 1609 kB in 1s (1075 kB/s) 323s Selecting previously unselected package libaec0:arm64. 324s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83359 files and directories currently installed.) 324s Preparing to unpack .../libaec0_1.1.3-1_arm64.deb ... 324s Unpacking libaec0:arm64 (1.1.3-1) ... 324s Selecting previously unselected package libsz2:arm64. 324s Preparing to unpack .../libsz2_1.1.3-1_arm64.deb ... 324s Unpacking libsz2:arm64 (1.1.3-1) ... 324s Selecting previously unselected package libhdf5-310:arm64. 324s Preparing to unpack .../libhdf5-310_1.14.5+repack-3build1_arm64.deb ... 324s Unpacking libhdf5-310:arm64 (1.14.5+repack-3build1) ... 324s Selecting previously unselected package python3-fast5:arm64. 324s Preparing to unpack .../python3-fast5_0.6.5-9build2_arm64.deb ... 324s Unpacking python3-fast5:arm64 (0.6.5-9build2) ... 324s Setting up libaec0:arm64 (1.1.3-1) ... 324s Setting up libsz2:arm64 (1.1.3-1) ... 324s Setting up libhdf5-310:arm64 (1.14.5+repack-3build1) ... 324s Setting up python3-fast5:arm64 (0.6.5-9build2) ... 324s Processing triggers for libc-bin (2.42-0ubuntu3) ... 326s autopkgtest [16:26:25]: test command2: python3 -c "import fast5" 326s autopkgtest [16:26:25]: test command2: [----------------------- 327s autopkgtest [16:26:26]: test command2: -----------------------] 327s command2 PASS 327s autopkgtest [16:26:26]: test command2: - - - - - - - - - - results - - - - - - - - - - 328s autopkgtest [16:26:27]: @@@@@@@@@@@@@@@@@@@@ summary 328s command1 PASS 328s command2 PASS