0s autopkgtest [01:41:48]: starting date and time: 2026-02-05 01:41:48+0000 0s autopkgtest [01:41:48]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [01:41:48]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.08fsi1h2/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc,src:chiark-tcl --apt-upgrade elkcode --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=glibc/2.42-2ubuntu5 chiark-tcl/1.3.7build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-arm64-36.secgroup --name adt-resolute-arm64-elkcode-20260205-014147-juju-7f2275-prod-proposed-migration-environment-20-bf393e35-25b5-43ff-9609-70b49a8bcea8 --image adt/ubuntu-resolute-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 7s Creating nova instance adt-resolute-arm64-elkcode-20260205-014147-juju-7f2275-prod-proposed-migration-environment-20-bf393e35-25b5-43ff-9609-70b49a8bcea8 from image adt/ubuntu-resolute-arm64-server-20260204.img (UUID f58d981d-b271-4157-b9b1-fd704695563c)... 92s autopkgtest [01:43:20]: testbed dpkg architecture: arm64 92s autopkgtest [01:43:20]: testbed apt version: 3.1.14 93s autopkgtest [01:43:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup 93s autopkgtest [01:43:21]: testbed release detected to be: None 94s autopkgtest [01:43:22]: updating testbed package index (apt update) 96s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 96s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 96s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 97s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 97s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [228 kB] 97s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1768 kB] 97s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [35.4 kB] 97s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5260 B] 97s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 Packages [262 kB] 97s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 c-n-f Metadata [7248 B] 97s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 Packages [52.9 kB] 97s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted arm64 c-n-f Metadata [328 B] 97s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 Packages [1540 kB] 97s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe arm64 c-n-f Metadata [40.2 kB] 97s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 Packages [26.0 kB] 97s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse arm64 c-n-f Metadata [776 B] 101s Fetched 4091 kB in 3s (1282 kB/s) 102s Reading package lists... 103s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 103s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 103s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 103s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 104s Reading package lists... 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s Calculating upgrade... 105s The following packages will be upgraded: 105s libc-bin libc-gconv-modules-extra libc6 locales python3-linkify-it 106s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s Need to get 7881 kB of archives. 106s After this operation, 0 B of additional disk space will be used. 106s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 libc-gconv-modules-extra arm64 2.42-2ubuntu5 [1413 kB] 107s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 libc6 arm64 2.42-2ubuntu5 [1594 kB] 107s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 libc-bin arm64 2.42-2ubuntu5 [599 kB] 107s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main arm64 locales all 2.42-2ubuntu5 [4255 kB] 108s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB] 108s dpkg-preconfigure: unable to re-open stdin: No such file or directory 108s Fetched 7881 kB in 3s (3135 kB/s) 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 89360 files and directories currently installed.) 108s Preparing to unpack .../libc-gconv-modules-extra_2.42-2ubuntu5_arm64.deb ... 108s Unpacking libc-gconv-modules-extra:arm64 (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 108s Setting up libc-gconv-modules-extra:arm64 (2.42-2ubuntu5) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 89360 files and directories currently installed.) 109s Preparing to unpack .../libc6_2.42-2ubuntu5_arm64.deb ... 109s Unpacking libc6:arm64 (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 109s Setting up libc6:arm64 (2.42-2ubuntu5) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 89360 files and directories currently installed.) 109s Preparing to unpack .../libc-bin_2.42-2ubuntu5_arm64.deb ... 109s Unpacking libc-bin (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 109s Setting up libc-bin (2.42-2ubuntu5) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 89360 files and directories currently installed.) 110s Preparing to unpack .../locales_2.42-2ubuntu5_all.deb ... 110s Unpacking locales (2.42-2ubuntu5) over (2.42-2ubuntu4) ... 110s Preparing to unpack .../python3-linkify-it_2.0.3-1ubuntu3_all.deb ... 110s Unpacking python3-linkify-it (2.0.3-1ubuntu3) over (2.0.3-1ubuntu2) ... 110s Setting up locales (2.42-2ubuntu5) ... 111s Generating locales (this might take a while)... 113s en_US.UTF-8... done 113s Generation complete. 113s Setting up python3-linkify-it (2.0.3-1ubuntu3) ... 113s Processing triggers for man-db (2.13.1-1) ... 114s Processing triggers for systemd (259-1ubuntu3) ... 116s autopkgtest [01:43:44]: upgrading testbed (apt dist-upgrade and autopurge) 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 117s Calculating upgrade... 118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Solving dependencies... 119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 121s autopkgtest [01:43:49]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:41:39 UTC 2026 122s autopkgtest [01:43:50]: @@@@@@@@@@@@@@@@@@@@ apt-source elkcode 124s Get:1 http://ftpmaster.internal/ubuntu resolute/universe elkcode 10.4.9-1 (dsc) [2084 B] 124s Get:2 http://ftpmaster.internal/ubuntu resolute/universe elkcode 10.4.9-1 (tar) [2918 kB] 124s Get:3 http://ftpmaster.internal/ubuntu resolute/universe elkcode 10.4.9-1 (diff) [10.6 kB] 124s gpgv: Signature made Fri Apr 25 08:45:56 2025 UTC 124s gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 124s gpgv: Can't check signature: No public key 124s dpkg-source: warning: cannot verify inline signature for ./elkcode_10.4.9-1.dsc: no acceptable signature found 124s autopkgtest [01:43:52]: testing package elkcode version 10.4.9-1 125s autopkgtest [01:43:53]: build not needed 126s autopkgtest [01:43:54]: test testsuite.sh: preparing testbed 126s Reading package lists... 126s Building dependency tree... 126s Reading state information... 126s Solving dependencies... 127s The following NEW packages will be installed: 127s elk-lapw libamd-comgr3 libamdhip64-6 libblas3 libevent-pthreads-2.1-7t64 127s libfabric1 libfftw3-double3 libfftw3-single3 libgfortran5 libgomp1 127s libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 127s libibumad3 liblapack3 libopenmpi40 libpciaccess0 librdmacm1t64 libucx0 127s libxc9 libxnvctrl0 mpi-default-bin ocl-icd-libopencl1 openmpi-bin 127s openmpi-common 128s 0 upgraded, 27 newly installed, 0 to remove and 0 not upgraded. 128s Need to get 43.2 MB of archives. 128s After this operation, 138 MB of additional disk space will be used. 128s Get:1 http://ftpmaster.internal/ubuntu resolute/main arm64 libblas3 arm64 3.12.1-7ubuntu1 [181 kB] 128s Get:2 http://ftpmaster.internal/ubuntu resolute/main arm64 libgomp1 arm64 15.2.0-12ubuntu1 [147 kB] 128s Get:3 http://ftpmaster.internal/ubuntu resolute/main arm64 libfftw3-double3 arm64 3.3.10-2fakesync1build2 [399 kB] 128s Get:4 http://ftpmaster.internal/ubuntu resolute/main arm64 libfftw3-single3 arm64 3.3.10-2fakesync1build2 [611 kB] 128s Get:5 http://ftpmaster.internal/ubuntu resolute/main arm64 libgfortran5 arm64 15.2.0-12ubuntu1 [451 kB] 128s Get:6 http://ftpmaster.internal/ubuntu resolute/main arm64 liblapack3 arm64 3.12.1-7ubuntu1 [2299 kB] 128s Get:7 http://ftpmaster.internal/ubuntu resolute/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10build1 [8272 B] 128s Get:8 http://ftpmaster.internal/ubuntu resolute/main arm64 librdmacm1t64 arm64 61.0-2ubuntu1 [73.7 kB] 128s Get:9 http://ftpmaster.internal/ubuntu resolute/universe arm64 libfabric1 arm64 2.1.0-1.1 [622 kB] 128s Get:10 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhwloc15 arm64 2.12.2-1 [169 kB] 128s Get:11 http://ftpmaster.internal/ubuntu resolute/universe arm64 libamd-comgr3 arm64 7.1.0+dfsg-0ubuntu2 [14.8 MB] 129s Get:12 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhsakmt1 arm64 6.4.3+dfsg-3 [67.5 kB] 129s Get:13 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhsa-runtime64-1 arm64 6.4.3+dfsg-3 [366 kB] 129s Get:14 http://ftpmaster.internal/ubuntu resolute/universe arm64 libamdhip64-6 arm64 6.4.3-4 [10.4 MB] 129s Get:15 http://ftpmaster.internal/ubuntu resolute/main arm64 libibumad3 arm64 61.0-2ubuntu1 [32.6 kB] 129s Get:16 http://ftpmaster.internal/ubuntu resolute/main arm64 libibmad5 arm64 61.0-2ubuntu1 [44.2 kB] 129s Get:17 http://ftpmaster.internal/ubuntu resolute/universe arm64 libucx0 arm64 1.20.0+ds-4ubuntu1 [895 kB] 129s Get:18 http://ftpmaster.internal/ubuntu resolute/main arm64 libpciaccess0 arm64 0.18.1-1ubuntu2 [19.4 kB] 129s Get:19 http://ftpmaster.internal/ubuntu resolute/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu7 [13.1 kB] 129s Get:20 http://ftpmaster.internal/ubuntu resolute/main arm64 ocl-icd-libopencl1 arm64 2.3.4-1 [41.1 kB] 129s Get:21 http://ftpmaster.internal/ubuntu resolute/universe arm64 libhwloc-plugins arm64 2.12.2-1 [16.6 kB] 130s Get:22 http://ftpmaster.internal/ubuntu resolute/universe arm64 libopenmpi40 arm64 5.0.8-8ubuntu1 [3274 kB] 130s Get:23 http://ftpmaster.internal/ubuntu resolute/universe arm64 libxc9 arm64 5.2.3-3.1 [3880 kB] 130s Get:24 http://ftpmaster.internal/ubuntu resolute/universe arm64 openmpi-common all 5.0.8-8ubuntu1 [108 kB] 130s Get:25 http://ftpmaster.internal/ubuntu resolute/universe arm64 openmpi-bin arm64 5.0.8-8ubuntu1 [209 kB] 130s Get:26 http://ftpmaster.internal/ubuntu resolute/universe arm64 mpi-default-bin arm64 1.20 [2660 B] 130s Get:27 http://ftpmaster.internal/ubuntu resolute/universe arm64 elk-lapw arm64 10.4.9-1 [3987 kB] 131s Fetched 43.2 MB in 4s (11.7 MB/s) 131s Selecting previously unselected package libblas3:arm64. 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 89360 files and directories currently installed.) 131s Preparing to unpack .../00-libblas3_3.12.1-7ubuntu1_arm64.deb ... 131s Unpacking libblas3:arm64 (3.12.1-7ubuntu1) ... 131s Selecting previously unselected package libgomp1:arm64. 131s Preparing to unpack .../01-libgomp1_15.2.0-12ubuntu1_arm64.deb ... 131s Unpacking libgomp1:arm64 (15.2.0-12ubuntu1) ... 131s Selecting previously unselected package libfftw3-double3:arm64. 131s Preparing to unpack .../02-libfftw3-double3_3.3.10-2fakesync1build2_arm64.deb ... 131s Unpacking libfftw3-double3:arm64 (3.3.10-2fakesync1build2) ... 131s Selecting previously unselected package libfftw3-single3:arm64. 131s Preparing to unpack .../03-libfftw3-single3_3.3.10-2fakesync1build2_arm64.deb ... 131s Unpacking libfftw3-single3:arm64 (3.3.10-2fakesync1build2) ... 131s Selecting previously unselected package libgfortran5:arm64. 131s Preparing to unpack .../04-libgfortran5_15.2.0-12ubuntu1_arm64.deb ... 131s Unpacking libgfortran5:arm64 (15.2.0-12ubuntu1) ... 131s Selecting previously unselected package liblapack3:arm64. 131s Preparing to unpack .../05-liblapack3_3.12.1-7ubuntu1_arm64.deb ... 131s Unpacking liblapack3:arm64 (3.12.1-7ubuntu1) ... 131s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 131s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10build1_arm64.deb ... 131s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10build1) ... 131s Selecting previously unselected package librdmacm1t64:arm64. 131s Preparing to unpack .../07-librdmacm1t64_61.0-2ubuntu1_arm64.deb ... 131s Unpacking librdmacm1t64:arm64 (61.0-2ubuntu1) ... 131s Selecting previously unselected package libfabric1:arm64. 131s Preparing to unpack .../08-libfabric1_2.1.0-1.1_arm64.deb ... 131s Unpacking libfabric1:arm64 (2.1.0-1.1) ... 132s Selecting previously unselected package libhwloc15:arm64. 132s Preparing to unpack .../09-libhwloc15_2.12.2-1_arm64.deb ... 132s Unpacking libhwloc15:arm64 (2.12.2-1) ... 132s Selecting previously unselected package libamd-comgr3:arm64. 132s Preparing to unpack .../10-libamd-comgr3_7.1.0+dfsg-0ubuntu2_arm64.deb ... 132s Unpacking libamd-comgr3:arm64 (7.1.0+dfsg-0ubuntu2) ... 132s Selecting previously unselected package libhsakmt1:arm64. 132s Preparing to unpack .../11-libhsakmt1_6.4.3+dfsg-3_arm64.deb ... 132s Unpacking libhsakmt1:arm64 (6.4.3+dfsg-3) ... 132s Selecting previously unselected package libhsa-runtime64-1:arm64. 132s Preparing to unpack .../12-libhsa-runtime64-1_6.4.3+dfsg-3_arm64.deb ... 132s Unpacking libhsa-runtime64-1:arm64 (6.4.3+dfsg-3) ... 132s Selecting previously unselected package libamdhip64-6:arm64. 132s Preparing to unpack .../13-libamdhip64-6_6.4.3-4_arm64.deb ... 132s Unpacking libamdhip64-6:arm64 (6.4.3-4) ... 132s Selecting previously unselected package libibumad3:arm64. 132s Preparing to unpack .../14-libibumad3_61.0-2ubuntu1_arm64.deb ... 132s Unpacking libibumad3:arm64 (61.0-2ubuntu1) ... 132s Selecting previously unselected package libibmad5:arm64. 132s Preparing to unpack .../15-libibmad5_61.0-2ubuntu1_arm64.deb ... 132s Unpacking libibmad5:arm64 (61.0-2ubuntu1) ... 132s Selecting previously unselected package libucx0:arm64. 132s Preparing to unpack .../16-libucx0_1.20.0+ds-4ubuntu1_arm64.deb ... 132s Unpacking libucx0:arm64 (1.20.0+ds-4ubuntu1) ... 132s Selecting previously unselected package libpciaccess0:arm64. 132s Preparing to unpack .../17-libpciaccess0_0.18.1-1ubuntu2_arm64.deb ... 132s Unpacking libpciaccess0:arm64 (0.18.1-1ubuntu2) ... 132s Selecting previously unselected package libxnvctrl0:arm64. 132s Preparing to unpack .../18-libxnvctrl0_510.47.03-0ubuntu7_arm64.deb ... 132s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu7) ... 132s Selecting previously unselected package ocl-icd-libopencl1:arm64. 133s Preparing to unpack .../19-ocl-icd-libopencl1_2.3.4-1_arm64.deb ... 133s Unpacking ocl-icd-libopencl1:arm64 (2.3.4-1) ... 133s Selecting previously unselected package libhwloc-plugins:arm64. 133s Preparing to unpack .../20-libhwloc-plugins_2.12.2-1_arm64.deb ... 133s Unpacking libhwloc-plugins:arm64 (2.12.2-1) ... 133s Selecting previously unselected package libopenmpi40:arm64. 133s Preparing to unpack .../21-libopenmpi40_5.0.8-8ubuntu1_arm64.deb ... 133s Unpacking libopenmpi40:arm64 (5.0.8-8ubuntu1) ... 133s Selecting previously unselected package libxc9:arm64. 133s Preparing to unpack .../22-libxc9_5.2.3-3.1_arm64.deb ... 133s Unpacking libxc9:arm64 (5.2.3-3.1) ... 133s Selecting previously unselected package openmpi-common. 133s Preparing to unpack .../23-openmpi-common_5.0.8-8ubuntu1_all.deb ... 133s Unpacking openmpi-common (5.0.8-8ubuntu1) ... 133s Selecting previously unselected package openmpi-bin. 133s Preparing to unpack .../24-openmpi-bin_5.0.8-8ubuntu1_arm64.deb ... 133s Unpacking openmpi-bin (5.0.8-8ubuntu1) ... 133s Selecting previously unselected package mpi-default-bin. 133s Preparing to unpack .../25-mpi-default-bin_1.20_arm64.deb ... 133s Unpacking mpi-default-bin (1.20) ... 133s Selecting previously unselected package elk-lapw. 133s Preparing to unpack .../26-elk-lapw_10.4.9-1_arm64.deb ... 133s Unpacking elk-lapw (10.4.9-1) ... 133s Setting up libpciaccess0:arm64 (0.18.1-1ubuntu2) ... 133s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10build1) ... 133s Setting up libibumad3:arm64 (61.0-2ubuntu1) ... 133s Setting up libibmad5:arm64 (61.0-2ubuntu1) ... 133s Setting up libgomp1:arm64 (15.2.0-12ubuntu1) ... 133s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu7) ... 133s Setting up libblas3:arm64 (3.12.1-7ubuntu1) ... 133s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 133s Setting up libhwloc15:arm64 (2.12.2-1) ... 133s Setting up libfftw3-double3:arm64 (3.3.10-2fakesync1build2) ... 133s Setting up libgfortran5:arm64 (15.2.0-12ubuntu1) ... 133s Setting up ocl-icd-libopencl1:arm64 (2.3.4-1) ... 133s Setting up libamd-comgr3:arm64 (7.1.0+dfsg-0ubuntu2) ... 133s Setting up openmpi-common (5.0.8-8ubuntu1) ... 133s Setting up librdmacm1t64:arm64 (61.0-2ubuntu1) ... 133s Setting up libhsakmt1:arm64 (6.4.3+dfsg-3) ... 133s Setting up libxc9:arm64 (5.2.3-3.1) ... 133s Setting up libfabric1:arm64 (2.1.0-1.1) ... 133s Setting up liblapack3:arm64 (3.12.1-7ubuntu1) ... 133s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 133s Setting up libfftw3-single3:arm64 (3.3.10-2fakesync1build2) ... 133s Setting up libhwloc-plugins:arm64 (2.12.2-1) ... 133s Setting up libhsa-runtime64-1:arm64 (6.4.3+dfsg-3) ... 133s Setting up libamdhip64-6:arm64 (6.4.3-4) ... 133s Setting up libucx0:arm64 (1.20.0+ds-4ubuntu1) ... 133s Setting up libopenmpi40:arm64 (5.0.8-8ubuntu1) ... 133s Setting up openmpi-bin (5.0.8-8ubuntu1) ... 133s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 133s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 133s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 133s Setting up mpi-default-bin (1.20) ... 133s Setting up elk-lapw (10.4.9-1) ... 133s Processing triggers for man-db (2.13.1-1) ... 134s Processing triggers for libc-bin (2.42-2ubuntu5) ... 135s autopkgtest [01:44:03]: test testsuite.sh: [----------------------- 135s 135s Running test in directory test_001... 135s 135s ┌─────────────────────────────────┐ 135s │ Elk code version 10.4.9 started │ 135s └─────────────────────────────────┘ 135s 135s Number of MPI processes : 1 135s Number of OpenMP threads per MPI process : 2 135s Total number of threads (MPI x OpenMP) : 2 135s Maximum OpenMP nesting level : 4 135s Number of OpenMP threads at first nesting level : 2 135s Number of MKL threads : 2 135s 135s RAM disk enabled 135s 135s ┌──────────────────┐ 135s │ Current task : 0 │ 135s └──────────────────┘ 135s Info(checkmt): changed muffin-tin radius of species 3 (Cu) from 2.4000 to 1.9694 135s Info(checkmt): changed muffin-tin radius of species 4 (O) from 1.8000 to 1.4770 135s 135s Info(findsymcrys): atomic basis shift (lattice) : 135s 0.5000000000 0.5000000000 0.5000000000 135s See GEOMETRY.OUT for new atomic positions 177s 178s ┌──────────────────┐ 178s │ Current task : 1 │ 178s └──────────────────┘ 184s 184s ┌────────────────────┐ 184s │ Current task : 115 │ 184s └────────────────────┘ 186s 186s Info(writeefg): electric field gradient written to EFG.OUT 186s 186s ┌────────────────────┐ 186s │ Current task : 500 │ 186s └────────────────────┘ 186s 186s Info(testcheck): passed all tests 186s 186s ┌──────────────────┐ 186s │ Elk code stopped │ 186s └──────────────────┘ 186s Passed 186s 186s Running test in directory test_002... 186s 186s ┌─────────────────────────────────┐ 186s │ Elk code version 10.4.9 started │ 186s └─────────────────────────────────┘ 186s 186s Number of MPI processes : 1 186s Number of OpenMP threads per MPI process : 2 186s Total number of threads (MPI x OpenMP) : 2 186s Maximum OpenMP nesting level : 4 186s Number of OpenMP threads at first nesting level : 2 186s Number of MKL threads : 2 186s 186s RAM disk enabled 186s 186s ┌──────────────────┐ 186s │ Current task : 0 │ 186s └──────────────────┘ 186s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3202 186s 186s Warning(gndstate): failed to reach self-consistency after 5 loops 186s 186s ┌────────────────────┐ 186s │ Current task : 500 │ 186s └────────────────────┘ 186s 186s Info(testcheck): passed all tests 186s 186s ┌──────────────────┐ 186s │ Elk code stopped │ 186s └──────────────────┘ 186s Passed 186s 186s Running test in directory test_003... 187s 187s ┌─────────────────────────────────┐ 187s │ Elk code version 10.4.9 started │ 187s └─────────────────────────────────┘ 187s 187s Number of MPI processes : 1 187s Number of OpenMP threads per MPI process : 2 187s Total number of threads (MPI x OpenMP) : 2 187s Maximum OpenMP nesting level : 4 187s Number of OpenMP threads at first nesting level : 2 187s Number of MKL threads : 2 187s 187s RAM disk enabled 187s 187s ┌──────────────────┐ 187s │ Current task : 0 │ 187s └──────────────────┘ 187s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1436 187s 187s Info(findsymcrys): atomic basis shift (lattice) : 187s 0.3650000000 0.3650000000 0.3650000000 187s See GEOMETRY.OUT for new atomic positions 187s 187s Warning(gndstate): failed to reach self-consistency after 10 loops 187s 187s ┌────────────────────┐ 187s │ Current task : 500 │ 187s └────────────────────┘ 187s 187s Info(testcheck): passed all tests 187s 187s ┌──────────────────┐ 187s │ Elk code stopped │ 187s └──────────────────┘ 187s Passed 187s 187s Running test in directory test_005... 187s 187s ┌─────────────────────────────────┐ 187s │ Elk code version 10.4.9 started │ 187s └─────────────────────────────────┘ 187s 187s Number of MPI processes : 1 187s Number of OpenMP threads per MPI process : 2 187s Total number of threads (MPI x OpenMP) : 2 187s Maximum OpenMP nesting level : 4 187s Number of OpenMP threads at first nesting level : 2 187s Number of MKL threads : 2 187s 187s RAM disk enabled 187s 187s ┌──────────────────┐ 187s │ Current task : 0 │ 187s └──────────────────┘ 187s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3615 188s 188s Warning(gndstate): failed to reach self-consistency after 5 loops 188s 188s ┌────────────────────┐ 188s │ Current task : 500 │ 188s └────────────────────┘ 188s 188s Info(testcheck): passed all tests 188s 188s ┌──────────────────┐ 188s │ Elk code stopped │ 188s └──────────────────┘ 188s Passed 188s 188s Running test in directory test_007... 188s 188s ┌─────────────────────────────────┐ 188s │ Elk code version 10.4.9 started │ 188s └─────────────────────────────────┘ 188s 188s Number of MPI processes : 1 188s Number of OpenMP threads per MPI process : 2 188s Total number of threads (MPI x OpenMP) : 2 188s Maximum OpenMP nesting level : 4 188s Number of OpenMP threads at first nesting level : 2 188s Number of MKL threads : 2 188s 188s RAM disk enabled 188s 188s ┌──────────────────┐ 188s │ Current task : 0 │ 188s └──────────────────┘ 201s 201s ┌───────────────────┐ 201s │ Current task : 15 │ 201s └───────────────────┘ 201s 201s Info(writelsj): 201s muffin-tin L, S and J expectation values written to LSJ.OUT 201s 201s ┌───────────────────┐ 201s │ Current task : 16 │ 201s └───────────────────┘ 201s 201s Info(writelsj): 201s muffin-tin L, S and J expectation values for each k-point and state 201s in kstlist written to LSJ_KST.OUT 201s 201s ┌────────────────────┐ 201s │ Current task : 500 │ 201s └────────────────────┘ 201s 201s Info(testcheck): passed all tests 201s 201s ┌──────────────────┐ 201s │ Elk code stopped │ 201s └──────────────────┘ 201s Passed 201s 201s Running test in directory test_009... 201s 201s ┌─────────────────────────────────┐ 201s │ Elk code version 10.4.9 started │ 201s └─────────────────────────────────┘ 201s 201s Number of MPI processes : 1 201s Number of OpenMP threads per MPI process : 2 201s Total number of threads (MPI x OpenMP) : 2 201s Maximum OpenMP nesting level : 4 201s Number of OpenMP threads at first nesting level : 2 201s Number of MKL threads : 2 201s 201s RAM disk enabled 201s 201s ┌──────────────────┐ 201s │ Current task : 0 │ 201s └──────────────────┘ 201s Info(checkmt): changed muffin-tin radius of species 1 (B) from 1.8000 to 1.6129 201s Info(checkmt): changed muffin-tin radius of species 2 (N+) from 1.4500 to 1.2993 202s 202s Warning(gndstate): failed to reach self-consistency after 6 loops 202s 202s ┌────────────────────┐ 202s │ Current task : 140 │ 202s └────────────────────┘ 202s Info(elnes): 1 of 8 k-points 202s Info(elnes): 2 of 8 k-points 202s Info(elnes): 3 of 8 k-points 202s Info(elnes): 4 of 8 k-points 202s Info(elnes): 5 of 8 k-points 202s Info(elnes): 6 of 8 k-points 202s Info(elnes): 7 of 8 k-points 202s Info(elnes): 8 of 8 k-points 203s 203s Info(elnes): 203s ELNES double differential cross-section written to ELNES.OUT 203s 203s ┌────────────────────┐ 203s │ Current task : 500 │ 203s └────────────────────┘ 203s 203s Info(testcheck): passed all tests 203s 203s ┌──────────────────┐ 203s │ Elk code stopped │ 203s └──────────────────┘ 203s Passed 203s 203s Running test in directory test_010... 203s 203s ┌─────────────────────────────────┐ 203s │ Elk code version 10.4.9 started │ 203s └─────────────────────────────────┘ 203s 203s Number of MPI processes : 1 203s Number of OpenMP threads per MPI process : 2 203s Total number of threads (MPI x OpenMP) : 2 203s Maximum OpenMP nesting level : 4 203s Number of OpenMP threads at first nesting level : 2 203s Number of MKL threads : 2 203s 203s RAM disk enabled 203s 203s ┌──────────────────┐ 203s │ Current task : 0 │ 203s └──────────────────┘ 203s Info(checkmt): changed muffin-tin radius of species 1 (O) from 1.8000 to 0.9906 203s Info(checkmt): changed muffin-tin radius of species 2 (H) from 1.4000 to 0.7704 203s 203s Warning(linengy): could not find 1 linearisation energies in s.c. loop 1 204s 204s Warning(gndstate): failed to reach self-consistency after 2 loops 204s 204s Warning(linengy): could not find 1 linearisation energies in s.c. loop 2 205s 205s ┌────────────────────┐ 205s │ Current task : 500 │ 205s └────────────────────┘ 205s 205s Info(testcheck): passed all tests 205s 205s ┌──────────────────┐ 205s │ Elk code stopped │ 205s └──────────────────┘ 205s Passed 205s 205s Running test in directory test_011... 205s 205s ┌─────────────────────────────────┐ 205s │ Elk code version 10.4.9 started │ 205s └─────────────────────────────────┘ 205s 205s Number of MPI processes : 1 205s Number of OpenMP threads per MPI process : 2 205s Total number of threads (MPI x OpenMP) : 2 205s Maximum OpenMP nesting level : 4 205s Number of OpenMP threads at first nesting level : 2 205s Number of MKL threads : 2 205s 205s RAM disk enabled 205s 205s ┌──────────────────┐ 205s │ Current task : 0 │ 205s └──────────────────┘ 205s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1964 205s 205s Info(findsymcrys): atomic basis shift (lattice) : 205s 0.3750000000 0.3750000000 0.3750000000 205s See GEOMETRY.OUT for new atomic positions 205s 205s Warning(gndstate): failed to reach self-consistency after 2 loops 205s 205s ┌──────────────────┐ 205s │ Current task : 5 │ 205s └──────────────────┘ 205s 205s Info(genkmat): 1 of 2 k-points 205s Info(genkmat): 2 of 2 k-points 205s Info(hartfock): self-consistent loop number : 1 205s Info(eveqnhf): 1 of 2 k-points 205s Info(eveqnhf): 2 of 2 k-points 206s Info(hartfock): self-consistent loop number : 2 206s Info(eveqnhf): 1 of 2 k-points 206s Info(eveqnhf): 2 of 2 k-points 206s Info(exxengy): 1 of 2 k-points 206s Info(exxengy): 2 of 2 k-points 207s 207s ┌────────────────────┐ 207s │ Current task : 500 │ 207s └────────────────────┘ 207s 207s Info(testcheck): passed all tests 207s 207s ┌──────────────────┐ 207s │ Elk code stopped │ 207s └──────────────────┘ 207s Passed 207s 207s Running test in directory test_013... 207s 207s ┌─────────────────────────────────┐ 207s │ Elk code version 10.4.9 started │ 207s └─────────────────────────────────┘ 207s 207s Number of MPI processes : 1 207s Number of OpenMP threads per MPI process : 2 207s Total number of threads (MPI x OpenMP) : 2 207s Maximum OpenMP nesting level : 4 207s Number of OpenMP threads at first nesting level : 2 207s Number of MKL threads : 2 207s 207s RAM disk enabled 207s 207s ┌──────────────────┐ 207s │ Current task : 0 │ 207s └──────────────────┘ 207s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3828 207s Info(checkmt): changed muffin-tin radius of species 2 (Al) from 2.2000 to 2.1842 213s 213s Warning(gndstate): failed to reach self-consistency after 4 loops 218s 218s ┌────────────────────┐ 218s │ Current task : 500 │ 218s └────────────────────┘ 218s 218s Info(testcheck): passed all tests 218s 218s ┌──────────────────┐ 218s │ Elk code stopped │ 218s └──────────────────┘ 218s Passed 218s 218s Running test in directory test_014... 218s 218s ┌─────────────────────────────────┐ 218s │ Elk code version 10.4.9 started │ 218s └─────────────────────────────────┘ 218s 218s Number of MPI processes : 1 218s Number of OpenMP threads per MPI process : 2 218s Total number of threads (MPI x OpenMP) : 2 218s Maximum OpenMP nesting level : 4 218s Number of OpenMP threads at first nesting level : 2 218s Number of MKL threads : 2 218s 218s RAM disk enabled 218s 218s ┌──────────────────┐ 218s │ Current task : 0 │ 218s └──────────────────┘ 218s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1964 218s 218s Info(findsymcrys): atomic basis shift (lattice) : 218s 0.3750000000 0.3750000000 0.3750000000 218s See GEOMETRY.OUT for new atomic positions 219s Info(oepvcl): 1 of 8 k-points 219s Info(oepvcl): 2 of 8 k-points 220s Info(oepvcl): 3 of 8 k-points 220s Info(oepvcl): 4 of 8 k-points 221s Info(oepvcl): 5 of 8 k-points 221s Info(oepvcl): 6 of 8 k-points 221s Info(oepvcl): 7 of 8 k-points 221s Info(oepvcl): 8 of 8 k-points 223s Info(oepmain): done 10 iterations of 20 225s Info(oepmain): done 20 iterations of 20 225s 225s Warning(gndstate): failed to reach self-consistency after 2 loops 225s Info(oepvcl): 1 of 8 k-points 225s Info(oepvcl): 2 of 8 k-points 226s Info(oepvcl): 3 of 8 k-points 226s Info(oepvcl): 4 of 8 k-points 227s Info(oepvcl): 5 of 8 k-points 227s Info(oepvcl): 6 of 8 k-points 228s Info(oepvcl): 7 of 8 k-points 228s Info(oepvcl): 8 of 8 k-points 229s Info(oepmain): done 10 iterations of 20 231s Info(oepmain): done 20 iterations of 20 231s Info(exxengy): 1 of 8 k-points 231s Info(exxengy): 2 of 8 k-points 231s Info(exxengy): 3 of 8 k-points 231s Info(exxengy): 4 of 8 k-points 231s Info(exxengy): 5 of 8 k-points 231s Info(exxengy): 6 of 8 k-points 231s Info(exxengy): 7 of 8 k-points 231s Info(exxengy): 8 of 8 k-points 232s 232s ┌────────────────────┐ 232s │ Current task : 500 │ 232s └────────────────────┘ 232s 232s Info(testcheck): passed all tests 232s 232s ┌──────────────────┐ 232s │ Elk code stopped │ 232s └──────────────────┘ 232s Passed 232s 232s Running test in directory test_018... 232s 232s ┌─────────────────────────────────┐ 232s │ Elk code version 10.4.9 started │ 232s └─────────────────────────────────┘ 232s 232s Number of MPI processes : 1 232s Number of OpenMP threads per MPI process : 2 232s Total number of threads (MPI x OpenMP) : 2 232s Maximum OpenMP nesting level : 4 232s Number of OpenMP threads at first nesting level : 2 232s Number of MKL threads : 2 232s 232s RAM disk enabled 232s 232s ┌──────────────────┐ 232s │ Current task : 0 │ 232s └──────────────────┘ 233s 233s ┌────────────────────┐ 233s │ Current task : 205 │ 233s └────────────────────┘ 234s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P1.OUT 241s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P1.OUT 252s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P1.OUT 260s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P2.OUT 267s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P2.OUT 278s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P2.OUT 286s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P3.OUT 293s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P3.OUT 302s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P3.OUT 310s Info(dyntask): nothing more to do 310s 310s ┌────────────────────┐ 310s │ Current task : 210 │ 310s └────────────────────┘ 337s 337s Info(phdos): 337s phonon density of states written to PHDOS.OUT 337s thermodynamic properties written to THERMO.OUT 337s 337s ┌────────────────────┐ 337s │ Current task : 500 │ 338s └────────────────────┘ 338s 338s Info(testcheck): passed all tests 338s 338s ┌──────────────────┐ 338s │ Elk code stopped │ 338s └──────────────────┘ 338s Passed 338s autopkgtest [01:47:26]: test testsuite.sh: -----------------------] 338s testsuite.sh PASS 338s autopkgtest [01:47:26]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 339s autopkgtest [01:47:27]: @@@@@@@@@@@@@@@@@@@@ summary 339s testsuite.sh PASS