0s autopkgtest [06:00:06]: starting date and time: 2026-02-10 06:00:06+0000
  0s autopkgtest [06:00:06]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [06:00:06]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6mpqdvjq/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-cran-tigger --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-22.secgroup --name adt-resolute-amd64-r-cran-tigger-20260210-060006-juju-7f2275-prod-proposed-migration-environment-15-f8087f24-ec7d-4e30-8d35-51e2caf694d3 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  3s Creating nova instance adt-resolute-amd64-r-cran-tigger-20260210-060006-juju-7f2275-prod-proposed-migration-environment-15-f8087f24-ec7d-4e30-8d35-51e2caf694d3 from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 71s autopkgtest [06:01:17]: testbed dpkg architecture: amd64
 72s autopkgtest [06:01:18]: testbed apt version: 3.1.14
 72s autopkgtest [06:01:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 72s autopkgtest [06:01:18]: testbed release detected to be: None
 73s autopkgtest [06:01:19]: updating testbed package index (apt update)
 73s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 73s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 73s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 73s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 73s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB]
 73s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [178 kB]
 73s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1727 kB]
 73s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [266 kB]
 73s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [219 kB]
 73s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [6184 B]
 73s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B]
 73s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [792 kB]
 74s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1787 kB]
 74s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.5 kB]
 74s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB]
 74s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B]
 74s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 74s Fetched 5197 kB in 1s (4920 kB/s)
 75s Reading package lists...
 75s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 76s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 76s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 76s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 76s Reading package lists...
 76s Reading package lists...
 76s Building dependency tree...
 76s Reading state information...
 77s Calculating upgrade...
 77s The following package was automatically installed and is no longer required:
 77s   libpython3.13
 77s Use 'sudo apt autoremove' to remove it.
 77s The following NEW packages will be installed:
 77s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 77s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 77s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 77s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 77s The following packages will be upgraded:
 77s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 77s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 77s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 77s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 77s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbrotli1 libbsd0
 77s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 77s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 77s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 77s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 77s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 77s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 77s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 77s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 77s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 77s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 77s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 77s 91 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 77s Need to get 237 MB of archives.
 77s After this operation, 339 MB of additional disk space will be used.
 77s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 77s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 77s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 77s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 77s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 77s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 77s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 77s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 77s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 77s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 77s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 77s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 77s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 77s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 77s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 77s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 77s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 77s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 77s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 77s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 77s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 77s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 77s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 77s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 77s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 77s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 77s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 78s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 78s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 78s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 78s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 78s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 78s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 78s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 78s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 78s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 78s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 78s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 78s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 78s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 78s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 78s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 78s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 78s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 78s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 78s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 78s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 78s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 78s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 78s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 78s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 78s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 78s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 78s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 78s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 78s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 78s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 78s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 78s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 78s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 78s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 79s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 79s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 79s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 79s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 79s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 79s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 79s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 79s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 79s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 79s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 79s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli1 amd64 1.2.0-3 [343 kB]
 79s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 79s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 79s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 79s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 79s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 79s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 79s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 79s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 80s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 80s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 80s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 94s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 95s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 96s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 96s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 96s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 96s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 96s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 96s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 97s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 98s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 98s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 99s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 99s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 99s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 99s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 99s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 99s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 99s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 99s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 99s Fetched 237 MB in 22s (10.7 MB/s)
 99s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 99s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 99s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 99s Setting up debianutils (5.23.2build1) ...
 99s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 99s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 99s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
100s Setting up dash (0.5.12-12ubuntu3) ...
100s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
100s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
100s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
100s Setting up findutils (4.10.0-3build2) ...
100s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
100s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
100s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
100s Setting up sed (4.9-2build3) ...
100s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
100s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
100s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
100s Setting up tar (1.35+dfsg-3.1build2) ...
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107s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ...
107s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
107s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
107s amd64-microcode: microcode will be updated at next boot
107s Setting up man-db (2.13.1-1build1) ...
107s Updating database of manual pages ...
109s man-db.service is a disabled or a static unit not running, not starting it.
109s Setting up libjansson4:amd64 (2.14-2build4) ...
109s Setting up libglib2.0-data (2.87.2-2) ...
109s Setting up pollinate (4.33-4ubuntu5) ...
119s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
119s Setting up libwrap0:amd64 (7.6.q-36build2) ...
119s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
121s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
121s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
121s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
121s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
121s Setting up patch (2.8-2build1) ...
121s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
121s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
121s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
121s Setting up lsof (4.99.4+dfsg-2build2) ...
121s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
121s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
121s Setting up dracut-install (109-11ubuntu1) ...
121s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
121s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
121s Setting up pnp.ids (0.394-1build1) ...
121s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
121s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
121s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
121s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
121s Setting up mawk (1.3.4.20260129-1) ...
121s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
121s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
121s Setting up linux-image-virtual (6.19.0-3.3) ...
121s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
121s Setting up libbsd0:amd64 (0.12.2-2build2) ...
121s Setting up libdrm-common (2.4.131-1) ...
121s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
121s Setting up dbus-bin (1.16.2-2ubuntu3) ...
121s Setting up libonig5:amd64 (6.9.10-1build1) ...
121s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
121s Setting up ethtool (1:6.15-3build1) ...
121s Setting up python3-referencing (0.36.2-1ubuntu2) ...
121s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
121s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
121s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
121s Setting up tcpdump (4.99.5-2ubuntu3) ...
121s Setting up linux-image-generic (6.19.0-3.3) ...
121s Setting up wget (1.25.0-2ubuntu4) ...
121s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
121s Setting up iptables (1.8.11-2ubuntu3) ...
121s Setting up iproute2 (6.18.0-1ubuntu1) ...
121s Setting up linux-headers-generic (6.19.0-3.3) ...
121s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
121s Setting up hwdata (0.394-1build1) ...
121s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
121s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
121s No schema files found: doing nothing.
121s Setting up dbus (1.16.2-2ubuntu3) ...
121s A reboot is required to replace the running dbus-daemon.
121s Please reboot the system when convenient.
121s Setting up shared-mime-info (2.4-5build3) ...
122s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
122s Setting up pciutils (1:3.14.0-1build2) ...
122s Setting up python3-markdown-it (3.0.0-3build1) ...
122s Setting up libdrm2:amd64 (2.4.131-1) ...
122s Setting up libpython3.14:amd64 (3.14.2-1) ...
122s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
122s Setting up linux-tools-common (6.19.0-3.3) ...
122s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
122s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
122s Setting up apt (3.1.15) ...
123s Setting up linux-headers-virtual (6.19.0-3.3) ...
123s Setting up linux-generic (6.19.0-3.3) ...
123s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
123s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
123s Setting up ubuntu-standard (1.564) ...
123s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
123s Setting up linux-virtual (6.19.0-3.3) ...
123s Setting up linux-perf (6.19.0-3.3) ...
123s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
123s Processing triggers for debianutils (5.23.2build1) ...
123s Processing triggers for install-info (7.2-5) ...
123s Processing triggers for initramfs-tools (0.150ubuntu7) ...
123s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
127s Processing triggers for libc-bin (2.42-2ubuntu4) ...
127s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
127s /etc/kernel/postinst.d/initramfs-tools:
127s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
131s /etc/kernel/postinst.d/zz-update-grub:
131s Sourcing file `/etc/default/grub'
131s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
131s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
131s Generating grub configuration file ...
131s Found linux image: /boot/vmlinuz-6.19.0-3-generic
131s Found initrd image: /boot/initrd.img-6.19.0-3-generic
131s Found linux image: /boot/vmlinuz-6.18.0-9-generic
131s Found initrd image: /boot/initrd.img-6.18.0-9-generic
131s Warning: os-prober will not be executed to detect other bootable partitions.
131s Systems on them will not be added to the GRUB boot configuration.
131s Check GRUB_DISABLE_OS_PROBER documentation entry.
131s Adding boot menu entry for UEFI Firmware Settings ...
131s done
131s autopkgtest [06:02:17]: upgrading testbed (apt dist-upgrade and autopurge)
132s Reading package lists...
132s Building dependency tree...
132s Reading state information...
132s Calculating upgrade...
132s The following package was automatically installed and is no longer required:
132s   libpython3.13
132s Use 'sudo apt autoremove' to remove it.
132s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
133s Reading package lists...
133s Building dependency tree...
133s Reading state information...
133s Solving dependencies...
133s The following packages will be REMOVED:
133s   libpython3.13*
133s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
133s After this operation, 7599 kB disk space will be freed.
133s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
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(Reading database ... 45%
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(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
133s Removing libpython3.13:amd64 (3.13.11-1) ...
133s Processing triggers for libc-bin (2.42-2ubuntu4) ...
133s autopkgtest [06:02:19]: rebooting testbed after setup commands that affected boot
161s autopkgtest [06:02:47]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
163s autopkgtest [06:02:49]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-tigger
165s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-tigger 1.1.0-2 (dsc) [2308 B]
165s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-tigger 1.1.0-2 (tar) [2866 kB]
165s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-tigger 1.1.0-2 (diff) [7952 B]
165s gpgv: Signature made Fri Dec 26 07:38:52 2025 UTC
165s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
165s gpgv:                issuer "plessy@debian.org"
165s gpgv: Can't check signature: No public key
165s dpkg-source: warning: cannot verify inline signature for ./r-cran-tigger_1.1.0-2.dsc: no acceptable signature found
165s autopkgtest [06:02:51]: testing package r-cran-tigger version 1.1.0-2
165s autopkgtest [06:02:51]: build not needed
167s autopkgtest [06:02:53]: test pkg-r-autopkgtest: preparing testbed
167s Reading package lists...
167s Building dependency tree...
167s Reading state information...
167s Solving dependencies...
168s The following NEW packages will be installed:
168s   build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu
168s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
168s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15
168s   g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15
168s   gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15
168s   gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools
168s   javascript-common libamd3 libasan8 libblas-dev libblas3 libboost-dev
168s   libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0
168s   libcolamd3 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1
168s   libgcc-15-dev libgfortran-15-dev libgfortran5 libglpk40 libgomp1
168s   libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1
168s   libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev
168s   libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js
168s   libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js
168s   libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js
168s   libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js
168s   libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4
168s   liblsan0 libltdl7 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev
168s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
168s   libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
168s   libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev
168s   libsharpyuv0 libsm6 libstdc++-15-dev libsuitesparseconfig7 libtcl8.6
168s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1
168s   libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64
168s   libzstd-dev linux-libc-dev node-bootstrap-sass node-html5shiv
168s   node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin
168s   r-base-core r-base-dev r-bioc-biobase r-bioc-biocgenerics
168s   r-bioc-biocparallel r-bioc-biostrings r-bioc-delayedarray
168s   r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments
168s   r-bioc-genomicranges r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhtslib
168s   r-bioc-rsamtools r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray
168s   r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc
168s   r-cran-abind r-cran-ade4 r-cran-airr r-cran-alakazam r-cran-ape
168s   r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bit r-cran-bit64
168s   r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli
168s   r-cran-clipr r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon
168s   r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest r-cran-doparallel
168s   r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap
168s   r-cran-fontawesome r-cran-foreach r-cran-formatr r-cran-fs
168s   r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggplot2
168s   r-cran-glue r-cran-gridextra r-cran-gtable r-cran-gtools r-cran-highr
168s   r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-igraph
168s   r-cran-isoband r-cran-iterators r-cran-jquerylib r-cran-jsonlite
168s   r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice
168s   r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass
168s   r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-nlme
168s   r-cran-openssl r-cran-pillar r-cran-pixmap r-cran-pkgbuild r-cran-pkgconfig
168s   r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-prettyunits
168s   r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-purrr
168s   r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp
168s   r-cran-rcpparmadillo r-cran-readr r-cran-rlang r-cran-rmarkdown
168s   r-cran-rprojroot r-cran-s7 r-cran-sass r-cran-scales r-cran-segmented
168s   r-cran-seqinr r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-sp
168s   r-cran-stringi r-cran-stringr r-cran-sys r-cran-testthat r-cran-tibble
168s   r-cran-tidyr r-cran-tidyselect r-cran-tigger r-cran-tinytex r-cran-tzdb
168s   r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-waldo
168s   r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml rpcsvc-proto unzip
168s   x11-common xdg-utils zip zlib1g-dev
168s 0 upgraded, 278 newly installed, 0 to remove and 0 not upgraded.
168s Need to get 349 MB of archives.
168s After this operation, 1162 MB of additional disk space will be used.
168s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
168s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
169s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
169s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
169s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
169s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
169s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
169s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
169s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
169s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
169s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
169s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
169s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
169s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
169s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
169s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
169s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
169s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
169s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
169s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
169s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
169s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
169s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
169s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
169s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
169s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
169s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
170s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
170s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
170s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
170s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
170s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
170s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
170s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
170s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
170s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
170s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
170s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
170s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
170s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
170s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
170s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
170s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
170s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
170s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
170s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
170s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
170s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
170s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libsuitesparseconfig7 amd64 1:7.12.1+dfsg-1 [22.0 kB]
170s Get:50 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd3 amd64 1:7.12.1+dfsg-1 [35.8 kB]
170s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
170s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
170s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB]
170s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B]
170s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
170s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
170s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
170s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
170s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
170s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
170s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libcolamd3 amd64 1:7.12.1+dfsg-1 [27.4 kB]
170s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
170s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
170s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
170s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl7 amd64 2.5.4-9 [43.7 kB]
170s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 libglpk40 amd64 5.0-2 [380 kB]
170s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
170s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
170s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
170s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
170s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
171s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
171s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
171s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
171s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
171s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
171s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
171s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
171s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
171s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
171s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
171s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
171s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
171s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
171s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
171s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
171s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
171s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
171s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
171s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
171s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
171s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
171s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
171s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
171s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
171s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
171s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
171s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
171s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
171s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
171s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
171s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
171s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
171s Get:104 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
171s Get:105 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
171s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
171s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
171s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
171s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
171s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
171s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
171s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
171s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
171s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
171s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
171s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
171s Get:117 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
171s Get:118 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
171s Get:119 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
171s Get:120 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
171s Get:121 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
171s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
171s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
171s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
171s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
171s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
171s Get:127 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
171s Get:128 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
171s Get:129 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
171s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
172s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
172s Get:132 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
172s Get:133 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
172s Get:134 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
172s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
172s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
172s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB]
172s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB]
172s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB]
172s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB]
172s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB]
172s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB]
172s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB]
172s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
172s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B]
172s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
172s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB]
172s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB]
172s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB]
172s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
172s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB]
172s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
172s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
172s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
172s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB]
172s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB]
172s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB]
172s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
172s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
172s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
172s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
172s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
172s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
172s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB]
173s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB]
173s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
173s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
173s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB]
173s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
173s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB]
173s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB]
173s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB]
173s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB]
173s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB]
173s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
173s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB]
173s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB]
173s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB]
173s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
173s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pixmap all 0.4-14-1 [217 kB]
173s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB]
173s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
173s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
173s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
173s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB]
173s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ade4 amd64 1.7-23-1 [5414 kB]
174s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
174s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clipr all 0.8.0-1build1 [54.0 kB]
174s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
174s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
174s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
174s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
174s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
174s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hms all 1.1.4-1 [102 kB]
174s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
174s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
174s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
174s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
174s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
174s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB]
174s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit64 amd64 4.6.0-1-4 [491 kB]
174s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
174s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
174s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tzdb amd64 0.5.0-1 [538 kB]
174s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB]
174s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB]
174s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vroom amd64 1.7.0-1 [910 kB]
174s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-readr amd64 2.1.6-1 [818 kB]
174s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
174s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
174s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-airr all 1.5.0+dfsg-1 [329 kB]
174s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
174s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
174s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB]
174s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
174s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
174s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
174s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
174s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
174s Get:220 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB]
174s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
174s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
174s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB]
174s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
174s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
174s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-igraph amd64 2.1.4-1build1 [5218 kB]
175s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-segmented all 2.1-4-1 [1376 kB]
175s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-seqinr amd64 4.2-36-1 [4015 kB]
175s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
175s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
175s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
175s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-alakazam amd64 1.3.0-1 [2410 kB]
175s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
175s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB]
175s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
175s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
175s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
175s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
175s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
175s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
175s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
175s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
175s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
175s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
175s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
175s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
175s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
175s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB]
175s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB]
175s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
175s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
175s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-doparallel all 1.0.17-1build1 [189 kB]
175s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
175s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
175s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB]
175s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtools amd64 3.9.5-1build1 [345 kB]
175s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
175s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
175s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
175s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
175s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
175s Get:262 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
176s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
176s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
176s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB]
176s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB]
176s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB]
176s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB]
176s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
176s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
176s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
176s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
176s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
176s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
177s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
177s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB]
177s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB]
177s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tigger all 1.1.0-2 [4049 kB]
178s Preconfiguring packages ...
178s Fetched 349 MB in 10s (36.6 MB/s)
178s Selecting previously unselected package libc-dev-bin.
178s (Reading database ... 
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178s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
178s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
178s Selecting previously unselected package linux-libc-dev:amd64.
178s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ...
178s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
178s Selecting previously unselected package libcrypt-dev:amd64.
178s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
178s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
178s Selecting previously unselected package rpcsvc-proto.
178s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
178s Unpacking rpcsvc-proto (1.4.3-1build1) ...
178s Selecting previously unselected package libc6-dev:amd64.
178s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ...
178s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
178s Selecting previously unselected package libisl23:amd64.
178s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ...
178s Unpacking libisl23:amd64 (0.27-1build1) ...
178s Selecting previously unselected package libmpc3:amd64.
178s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ...
178s Unpacking libmpc3:amd64 (1.3.1-2) ...
178s Selecting previously unselected package cpp-15-x86-64-linux-gnu.
178s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
178s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
178s Selecting previously unselected package cpp-15.
178s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ...
178s Unpacking cpp-15 (15.2.0-12ubuntu1) ...
178s Selecting previously unselected package cpp-x86-64-linux-gnu.
178s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
178s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
178s Selecting previously unselected package cpp.
178s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ...
178s Unpacking cpp (4:15.2.0-4ubuntu1) ...
178s Selecting previously unselected package libcc1-0:amd64.
178s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libgomp1:amd64.
178s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libitm1:amd64.
178s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libasan8:amd64.
178s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package liblsan0:amd64.
178s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libtsan2:amd64.
178s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libubsan1:amd64.
178s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libhwasan0:amd64.
178s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libquadmath0:amd64.
178s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ...
178s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ...
178s Selecting previously unselected package libgcc-15-dev:amd64.
178s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ...
178s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
178s Selecting previously unselected package gcc-15-x86-64-linux-gnu.
178s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
178s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package gcc-15.
179s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ...
179s Unpacking gcc-15 (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package gcc-x86-64-linux-gnu.
179s Preparing to unpack .../023-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
179s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
179s Selecting previously unselected package gcc.
179s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ...
179s Unpacking gcc (4:15.2.0-4ubuntu1) ...
179s Selecting previously unselected package libstdc++-15-dev:amd64.
179s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ...
179s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package g++-15-x86-64-linux-gnu.
179s Preparing to unpack .../026-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
179s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package g++-15.
179s Preparing to unpack .../027-g++-15_15.2.0-12ubuntu1_amd64.deb ...
179s Unpacking g++-15 (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package g++-x86-64-linux-gnu.
179s Preparing to unpack .../028-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
179s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
179s Selecting previously unselected package g++.
179s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_amd64.deb ...
179s Unpacking g++ (4:15.2.0-4ubuntu1) ...
179s Selecting previously unselected package build-essential.
179s Preparing to unpack .../030-build-essential_12.12ubuntu2_amd64.deb ...
179s Unpacking build-essential (12.12ubuntu2) ...
179s Selecting previously unselected package dctrl-tools.
179s Preparing to unpack .../031-dctrl-tools_2.24-3build4_amd64.deb ...
179s Unpacking dctrl-tools (2.24-3build4) ...
179s Selecting previously unselected package fonts-dejavu-mono.
179s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8build1_all.deb ...
179s Unpacking fonts-dejavu-mono (2.37-8build1) ...
179s Selecting previously unselected package fonts-dejavu-core.
179s Preparing to unpack .../033-fonts-dejavu-core_2.37-8build1_all.deb ...
179s Unpacking fonts-dejavu-core (2.37-8build1) ...
179s Selecting previously unselected package fontconfig-config.
179s Preparing to unpack .../034-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
179s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
179s Selecting previously unselected package libfontconfig1:amd64.
179s Preparing to unpack .../035-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
179s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
179s Selecting previously unselected package fontconfig.
179s Preparing to unpack .../036-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
179s Unpacking fontconfig (2.17.1-3ubuntu1) ...
179s Selecting previously unselected package fonts-font-awesome.
179s Preparing to unpack .../037-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ...
179s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
179s Selecting previously unselected package fonts-glyphicons-halflings.
179s Preparing to unpack .../038-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
179s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
179s Selecting previously unselected package fonts-mathjax.
179s Preparing to unpack .../039-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
179s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
179s Selecting previously unselected package libgfortran5:amd64.
179s Preparing to unpack .../040-libgfortran5_16-20260208-1ubuntu1_amd64.deb ...
179s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ...
179s Selecting previously unselected package libgfortran-15-dev:amd64.
179s Preparing to unpack .../041-libgfortran-15-dev_15.2.0-12ubuntu1_amd64.deb ...
179s Unpacking libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package gfortran-15-x86-64-linux-gnu.
179s Preparing to unpack .../042-gfortran-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
179s Unpacking gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package gfortran-15.
179s Preparing to unpack .../043-gfortran-15_15.2.0-12ubuntu1_amd64.deb ...
179s Unpacking gfortran-15 (15.2.0-12ubuntu1) ...
179s Selecting previously unselected package gfortran-x86-64-linux-gnu.
179s Preparing to unpack .../044-gfortran-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
179s Unpacking gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
179s Selecting previously unselected package gfortran.
179s Preparing to unpack .../045-gfortran_4%3a15.2.0-4ubuntu1_amd64.deb ...
179s Unpacking gfortran (4:15.2.0-4ubuntu1) ...
179s Selecting previously unselected package icu-devtools.
179s Preparing to unpack .../046-icu-devtools_78.2-1ubuntu1_amd64.deb ...
179s Unpacking icu-devtools (78.2-1ubuntu1) ...
179s Selecting previously unselected package javascript-common.
179s Preparing to unpack .../047-javascript-common_12+nmu1build1_all.deb ...
179s Unpacking javascript-common (12+nmu1build1) ...
179s Selecting previously unselected package libsuitesparseconfig7:amd64.
179s Preparing to unpack .../048-libsuitesparseconfig7_1%3a7.12.1+dfsg-1_amd64.deb ...
179s Unpacking libsuitesparseconfig7:amd64 (1:7.12.1+dfsg-1) ...
179s Selecting previously unselected package libamd3:amd64.
179s Preparing to unpack .../049-libamd3_1%3a7.12.1+dfsg-1_amd64.deb ...
179s Unpacking libamd3:amd64 (1:7.12.1+dfsg-1) ...
179s Selecting previously unselected package libblas3:amd64.
179s Preparing to unpack .../050-libblas3_3.12.1-7ubuntu1_amd64.deb ...
179s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ...
179s Selecting previously unselected package libblas-dev:amd64.
180s Preparing to unpack .../051-libblas-dev_3.12.1-7ubuntu1_amd64.deb ...
180s Unpacking libblas-dev:amd64 (3.12.1-7ubuntu1) ...
180s Selecting previously unselected package libboost1.90-dev:amd64.
180s Preparing to unpack .../052-libboost1.90-dev_1.90.0-2ubuntu1_amd64.deb ...
180s Unpacking libboost1.90-dev:amd64 (1.90.0-2ubuntu1) ...
180s Selecting previously unselected package libboost-dev:amd64.
180s Preparing to unpack .../053-libboost-dev_1.90.0.0ubuntu3_amd64.deb ...
180s Unpacking libboost-dev:amd64 (1.90.0.0ubuntu3) ...
180s Selecting previously unselected package libbz2-dev:amd64.
180s Preparing to unpack .../054-libbz2-dev_1.0.8-6build2_amd64.deb ...
180s Unpacking libbz2-dev:amd64 (1.0.8-6build2) ...
180s Selecting previously unselected package libpixman-1-0:amd64.
180s Preparing to unpack .../055-libpixman-1-0_0.46.4-1_amd64.deb ...
180s Unpacking libpixman-1-0:amd64 (0.46.4-1) ...
180s Selecting previously unselected package libxcb-render0:amd64.
180s Preparing to unpack .../056-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
180s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
180s Selecting previously unselected package libxcb-shm0:amd64.
180s Preparing to unpack .../057-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
180s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
180s Selecting previously unselected package libxrender1:amd64.
180s Preparing to unpack .../058-libxrender1_1%3a0.9.12-1_amd64.deb ...
180s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
180s Selecting previously unselected package libcairo2:amd64.
180s Preparing to unpack .../059-libcairo2_1.18.4-3_amd64.deb ...
180s Unpacking libcairo2:amd64 (1.18.4-3) ...
180s Selecting previously unselected package libcolamd3:amd64.
180s Preparing to unpack .../060-libcolamd3_1%3a7.12.1+dfsg-1_amd64.deb ...
180s Unpacking libcolamd3:amd64 (1:7.12.1+dfsg-1) ...
180s Selecting previously unselected package libdatrie1:amd64.
180s Preparing to unpack .../061-libdatrie1_0.2.14-1_amd64.deb ...
180s Unpacking libdatrie1:amd64 (0.2.14-1) ...
180s Selecting previously unselected package libdeflate0:amd64.
180s Preparing to unpack .../062-libdeflate0_1.23-2build1_amd64.deb ...
180s Unpacking libdeflate0:amd64 (1.23-2build1) ...
180s Selecting previously unselected package libdeflate-dev:amd64.
180s Preparing to unpack .../063-libdeflate-dev_1.23-2build1_amd64.deb ...
180s Unpacking libdeflate-dev:amd64 (1.23-2build1) ...
180s Selecting previously unselected package libltdl7:amd64.
180s Preparing to unpack .../064-libltdl7_2.5.4-9_amd64.deb ...
180s Unpacking libltdl7:amd64 (2.5.4-9) ...
180s Selecting previously unselected package libglpk40:amd64.
180s Preparing to unpack .../065-libglpk40_5.0-2_amd64.deb ...
180s Unpacking libglpk40:amd64 (5.0-2) ...
180s Selecting previously unselected package libgraphite2-3:amd64.
180s Preparing to unpack .../066-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ...
180s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
180s Selecting previously unselected package libharfbuzz0b:amd64.
180s Preparing to unpack .../067-libharfbuzz0b_12.3.2-1_amd64.deb ...
180s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ...
180s Selecting previously unselected package x11-common.
180s Preparing to unpack .../068-x11-common_1%3a7.7+24ubuntu1_all.deb ...
180s Unpacking x11-common (1:7.7+24ubuntu1) ...
180s Selecting previously unselected package libice6:amd64.
181s Preparing to unpack .../069-libice6_2%3a1.1.1-1build1_amd64.deb ...
181s Unpacking libice6:amd64 (2:1.1.1-1build1) ...
181s Selecting previously unselected package libicu-dev:amd64.
181s Preparing to unpack .../070-libicu-dev_78.2-1ubuntu1_amd64.deb ...
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183s Selecting previously unselected package r-bioc-summarizedexperiment.
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183s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
183s Selecting previously unselected package r-cran-bitops.
183s Preparing to unpack .../174-r-cran-bitops_1.0-9-1_amd64.deb ...
183s Unpacking r-cran-bitops (1.0-9-1) ...
183s Selecting previously unselected package r-bioc-rhtslib.
183s Preparing to unpack .../175-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ...
183s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ...
183s Selecting previously unselected package r-bioc-rsamtools.
183s Preparing to unpack .../176-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ...
183s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ...
184s Selecting previously unselected package r-bioc-genomicalignments.
184s Preparing to unpack .../177-r-bioc-genomicalignments_1.42.0-2_amd64.deb ...
184s Unpacking r-bioc-genomicalignments (1.42.0-2) ...
184s Selecting previously unselected package r-cran-mass.
184s Preparing to unpack .../178-r-cran-mass_7.3-65-1_amd64.deb ...
184s Unpacking r-cran-mass (7.3-65-1) ...
184s Selecting previously unselected package r-cran-pixmap.
184s Preparing to unpack .../179-r-cran-pixmap_0.4-14-1_all.deb ...
184s Unpacking r-cran-pixmap (0.4-14-1) ...
184s Selecting previously unselected package r-cran-sp.
184s Preparing to unpack .../180-r-cran-sp_1%3a2.2-0+dfsg-1_amd64.deb ...
184s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ...
184s Selecting previously unselected package r-cran-littler.
184s Preparing to unpack .../181-r-cran-littler_0.3.22-1_amd64.deb ...
184s Unpacking r-cran-littler (0.3.22-1) ...
184s Selecting previously unselected package r-cran-pkgkitten.
184s Preparing to unpack .../182-r-cran-pkgkitten_0.2.4-1_all.deb ...
184s Unpacking r-cran-pkgkitten (0.2.4-1) ...
184s Selecting previously unselected package r-cran-rcpp.
184s Preparing to unpack .../183-r-cran-rcpp_1.1.0-1_amd64.deb ...
184s Unpacking r-cran-rcpp (1.1.0-1) ...
184s Selecting previously unselected package r-cran-rcpparmadillo.
184s Preparing to unpack .../184-r-cran-rcpparmadillo_15.2.3-1-1_amd64.deb ...
184s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ...
184s Selecting previously unselected package r-cran-ade4.
184s Preparing to unpack .../185-r-cran-ade4_1.7-23-1_amd64.deb ...
184s Unpacking r-cran-ade4 (1.7-23-1) ...
184s Selecting previously unselected package r-cran-cli.
184s Preparing to unpack .../186-r-cran-cli_3.6.4-1_amd64.deb ...
184s Unpacking r-cran-cli (3.6.4-1) ...
184s Selecting previously unselected package r-cran-clipr.
184s Preparing to unpack .../187-r-cran-clipr_0.8.0-1build1_all.deb ...
184s Unpacking r-cran-clipr (0.8.0-1build1) ...
184s Selecting previously unselected package r-cran-rlang.
184s Preparing to unpack .../188-r-cran-rlang_1.1.5-3_amd64.deb ...
184s Unpacking r-cran-rlang (1.1.5-3) ...
184s Selecting previously unselected package r-cran-lifecycle.
184s Preparing to unpack .../189-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
184s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
184s Selecting previously unselected package r-cran-pkgconfig.
184s Preparing to unpack .../190-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
184s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
184s Selecting previously unselected package r-cran-glue.
184s Preparing to unpack .../191-r-cran-glue_1.8.0-1_amd64.deb ...
184s Unpacking r-cran-glue (1.8.0-1) ...
184s Selecting previously unselected package r-cran-vctrs.
184s Preparing to unpack .../192-r-cran-vctrs_0.6.5-1_amd64.deb ...
184s Unpacking r-cran-vctrs (0.6.5-1) ...
184s Selecting previously unselected package r-cran-hms.
184s Preparing to unpack .../193-r-cran-hms_1.1.4-1_all.deb ...
184s Unpacking r-cran-hms (1.1.4-1) ...
184s Selecting previously unselected package r-cran-fansi.
184s Preparing to unpack .../194-r-cran-fansi_1.0.6-2_amd64.deb ...
184s Unpacking r-cran-fansi (1.0.6-2) ...
184s Selecting previously unselected package r-cran-magrittr.
184s Preparing to unpack .../195-r-cran-magrittr_2.0.3-1_amd64.deb ...
184s Unpacking r-cran-magrittr (2.0.3-1) ...
184s Selecting previously unselected package r-cran-utf8.
184s Preparing to unpack .../196-r-cran-utf8_1.2.4-1_amd64.deb ...
184s Unpacking r-cran-utf8 (1.2.4-1) ...
184s Selecting previously unselected package r-cran-pillar.
184s Preparing to unpack .../197-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
184s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
184s Selecting previously unselected package r-cran-tibble.
184s Preparing to unpack .../198-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
184s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
184s Selecting previously unselected package r-cran-bit.
184s Preparing to unpack .../199-r-cran-bit_4.6.0+dfsg-1_amd64.deb ...
184s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
184s Selecting previously unselected package r-cran-bit64.
184s Preparing to unpack .../200-r-cran-bit64_4.6.0-1-4_amd64.deb ...
184s Unpacking r-cran-bit64 (4.6.0-1-4) ...
184s Selecting previously unselected package r-cran-withr.
184s Preparing to unpack .../201-r-cran-withr_3.0.2+dfsg-1_all.deb ...
184s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
184s Selecting previously unselected package r-cran-tidyselect.
184s Preparing to unpack .../202-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
184s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
184s Selecting previously unselected package r-cran-tzdb.
184s Preparing to unpack .../203-r-cran-tzdb_0.5.0-1_amd64.deb ...
184s Unpacking r-cran-tzdb (0.5.0-1) ...
184s Selecting previously unselected package r-cran-prettyunits.
184s Preparing to unpack .../204-r-cran-prettyunits_1.2.0-1_all.deb ...
184s Unpacking r-cran-prettyunits (1.2.0-1) ...
184s Selecting previously unselected package r-cran-progress.
184s Preparing to unpack .../205-r-cran-progress_1.2.3-1_all.deb ...
184s Unpacking r-cran-progress (1.2.3-1) ...
184s Selecting previously unselected package r-cran-vroom.
184s Preparing to unpack .../206-r-cran-vroom_1.7.0-1_amd64.deb ...
184s Unpacking r-cran-vroom (1.7.0-1) ...
184s Selecting previously unselected package r-cran-readr.
184s Preparing to unpack .../207-r-cran-readr_2.1.6-1_amd64.deb ...
184s Unpacking r-cran-readr (2.1.6-1) ...
184s Selecting previously unselected package r-cran-stringi.
184s Preparing to unpack .../208-r-cran-stringi_1.8.4-1build2_amd64.deb ...
184s Unpacking r-cran-stringi (1.8.4-1build2) ...
184s Selecting previously unselected package r-cran-yaml.
184s Preparing to unpack .../209-r-cran-yaml_2.3.10-1_amd64.deb ...
184s Unpacking r-cran-yaml (2.3.10-1) ...
184s Selecting previously unselected package r-cran-airr.
184s Preparing to unpack .../210-r-cran-airr_1.5.0+dfsg-1_all.deb ...
184s Unpacking r-cran-airr (1.5.0+dfsg-1) ...
184s Selecting previously unselected package r-cran-gtable.
184s Preparing to unpack .../211-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
184s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
184s Selecting previously unselected package r-cran-isoband.
184s Preparing to unpack .../212-r-cran-isoband_0.2.7-1_amd64.deb ...
184s Unpacking r-cran-isoband (0.2.7-1) ...
184s Selecting previously unselected package r-cran-s7.
184s Preparing to unpack .../213-r-cran-s7_0.2.0-1_amd64.deb ...
184s Unpacking r-cran-s7 (0.2.0-1) ...
184s Selecting previously unselected package r-cran-farver.
184s Preparing to unpack .../214-r-cran-farver_2.1.2-1_amd64.deb ...
184s Unpacking r-cran-farver (2.1.2-1) ...
184s Selecting previously unselected package r-cran-labeling.
184s Preparing to unpack .../215-r-cran-labeling_0.4.3-1_all.deb ...
184s Unpacking r-cran-labeling (0.4.3-1) ...
184s Selecting previously unselected package r-cran-rcolorbrewer.
184s Preparing to unpack .../216-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ...
184s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ...
184s Selecting previously unselected package r-cran-viridislite.
184s Preparing to unpack .../217-r-cran-viridislite_0.4.3-1_all.deb ...
184s Unpacking r-cran-viridislite (0.4.3-1) ...
184s Selecting previously unselected package r-cran-scales.
184s Preparing to unpack .../218-r-cran-scales_1.4.0-1_all.deb ...
184s Unpacking r-cran-scales (1.4.0-1) ...
184s Selecting previously unselected package r-cran-ggplot2.
184s Preparing to unpack .../219-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ...
184s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ...
184s Selecting previously unselected package r-cran-nlme.
184s Preparing to unpack .../220-r-cran-nlme_3.1.168-1_amd64.deb ...
184s Unpacking r-cran-nlme (3.1.168-1) ...
185s Selecting previously unselected package r-cran-digest.
185s Preparing to unpack .../221-r-cran-digest_0.6.39-1_amd64.deb ...
185s Unpacking r-cran-digest (0.6.39-1) ...
185s Selecting previously unselected package r-cran-ape.
185s Preparing to unpack .../222-r-cran-ape_5.8-1-1_amd64.deb ...
185s Unpacking r-cran-ape (5.8-1-1) ...
185s Selecting previously unselected package r-cran-generics.
185s Preparing to unpack .../223-r-cran-generics_0.1.4-1_all.deb ...
185s Unpacking r-cran-generics (0.1.4-1) ...
185s Selecting previously unselected package r-cran-dplyr.
185s Preparing to unpack .../224-r-cran-dplyr_1.1.4-4_amd64.deb ...
185s Unpacking r-cran-dplyr (1.1.4-4) ...
185s Selecting previously unselected package r-cran-igraph.
185s Preparing to unpack .../225-r-cran-igraph_2.1.4-1build1_amd64.deb ...
185s Unpacking r-cran-igraph (2.1.4-1build1) ...
185s Selecting previously unselected package r-cran-segmented.
185s Preparing to unpack .../226-r-cran-segmented_2.1-4-1_all.deb ...
185s Unpacking r-cran-segmented (2.1-4-1) ...
185s Selecting previously unselected package r-cran-seqinr.
185s Preparing to unpack .../227-r-cran-seqinr_4.2-36-1_amd64.deb ...
185s Unpacking r-cran-seqinr (4.2-36-1) ...
185s Selecting previously unselected package r-cran-purrr.
185s Preparing to unpack .../228-r-cran-purrr_1.0.4-1_amd64.deb ...
185s Unpacking r-cran-purrr (1.0.4-1) ...
185s Selecting previously unselected package r-cran-stringr.
185s Preparing to unpack .../229-r-cran-stringr_1.5.1-1_all.deb ...
185s Unpacking r-cran-stringr (1.5.1-1) ...
185s Selecting previously unselected package r-cran-tidyr.
185s Preparing to unpack .../230-r-cran-tidyr_1.3.1-1_amd64.deb ...
185s Unpacking r-cran-tidyr (1.3.1-1) ...
185s Selecting previously unselected package r-cran-alakazam.
185s Preparing to unpack .../231-r-cran-alakazam_1.3.0-1_amd64.deb ...
185s Unpacking r-cran-alakazam (1.3.0-1) ...
185s Selecting previously unselected package r-cran-base64enc.
185s Preparing to unpack .../232-r-cran-base64enc_0.1-3-3build1_amd64.deb ...
185s Unpacking r-cran-base64enc (0.1-3-3build1) ...
185s Selecting previously unselected package r-cran-brio.
185s Preparing to unpack .../233-r-cran-brio_1.1.5-1_amd64.deb ...
185s Unpacking r-cran-brio (1.1.5-1) ...
185s Selecting previously unselected package r-cran-fastmap.
185s Preparing to unpack .../234-r-cran-fastmap_1.2.0-1_amd64.deb ...
185s Unpacking r-cran-fastmap (1.2.0-1) ...
185s Selecting previously unselected package r-cran-cachem.
185s Preparing to unpack .../235-r-cran-cachem_1.1.0-1_amd64.deb ...
185s Unpacking r-cran-cachem (1.1.0-1) ...
185s Selecting previously unselected package r-cran-htmltools.
185s Preparing to unpack .../236-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
185s Unpacking r-cran-htmltools (0.5.8.1-1) ...
185s Selecting previously unselected package r-cran-jquerylib.
185s Preparing to unpack .../237-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ...
185s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ...
185s Selecting previously unselected package r-cran-memoise.
185s Preparing to unpack .../238-r-cran-memoise_2.0.1-1build1_all.deb ...
185s Unpacking r-cran-memoise (2.0.1-1build1) ...
185s Selecting previously unselected package r-cran-fs.
185s Preparing to unpack .../239-r-cran-fs_1.6.5+dfsg-1_amd64.deb ...
185s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
185s Selecting previously unselected package r-cran-rappdirs.
185s Preparing to unpack .../240-r-cran-rappdirs_0.3.3-1build1_amd64.deb ...
185s Unpacking r-cran-rappdirs (0.3.3-1build1) ...
185s Selecting previously unselected package r-cran-sass.
185s Preparing to unpack .../241-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
185s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
185s Selecting previously unselected package r-cran-bslib.
185s Preparing to unpack .../242-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
185s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
185s Selecting previously unselected package r-cran-ps.
185s Preparing to unpack .../243-r-cran-ps_1.9.0-1_amd64.deb ...
185s Unpacking r-cran-ps (1.9.0-1) ...
185s Selecting previously unselected package r-cran-processx.
185s Preparing to unpack .../244-r-cran-processx_3.8.6-1_amd64.deb ...
185s Unpacking r-cran-processx (3.8.6-1) ...
185s Selecting previously unselected package r-cran-callr.
185s Preparing to unpack .../245-r-cran-callr_3.7.6-1_all.deb ...
185s Unpacking r-cran-callr (3.7.6-1) ...
185s Selecting previously unselected package r-cran-commonmark.
185s Preparing to unpack .../246-r-cran-commonmark_1.9.5-1_amd64.deb ...
185s Unpacking r-cran-commonmark (1.9.5-1) ...
185s Selecting previously unselected package r-cran-desc.
185s Preparing to unpack .../247-r-cran-desc_1.4.3-1_all.deb ...
185s Unpacking r-cran-desc (1.4.3-1) ...
185s Selecting previously unselected package r-cran-diffobj.
185s Preparing to unpack .../248-r-cran-diffobj_0.3.5-1build1_amd64.deb ...
185s Unpacking r-cran-diffobj (0.3.5-1build1) ...
185s Selecting previously unselected package r-cran-iterators.
185s Preparing to unpack .../249-r-cran-iterators_1.0.14-1build1_all.deb ...
185s Unpacking r-cran-iterators (1.0.14-1build1) ...
185s Selecting previously unselected package r-cran-foreach.
185s Preparing to unpack .../250-r-cran-foreach_1.5.2-1build1_all.deb ...
185s Unpacking r-cran-foreach (1.5.2-1build1) ...
185s Selecting previously unselected package r-cran-doparallel.
185s Preparing to unpack .../251-r-cran-doparallel_1.0.17-1build1_all.deb ...
185s Unpacking r-cran-doparallel (1.0.17-1build1) ...
185s Selecting previously unselected package r-cran-evaluate.
185s Preparing to unpack .../252-r-cran-evaluate_1.0.5-1_all.deb ...
185s Unpacking r-cran-evaluate (1.0.5-1) ...
185s Selecting previously unselected package r-cran-fontawesome.
185s Preparing to unpack .../253-r-cran-fontawesome_0.5.3-1_all.deb ...
185s Unpacking r-cran-fontawesome (0.5.3-1) ...
185s Selecting previously unselected package r-cran-gridextra.
185s Preparing to unpack .../254-r-cran-gridextra_2.3-3build2_all.deb ...
185s Unpacking r-cran-gridextra (2.3-3build2) ...
185s Selecting previously unselected package r-cran-gtools.
185s Preparing to unpack .../255-r-cran-gtools_3.9.5-1build1_amd64.deb ...
185s Unpacking r-cran-gtools (3.9.5-1build1) ...
185s Selecting previously unselected package r-cran-xfun.
185s Preparing to unpack .../256-r-cran-xfun_0.55+dfsg-1_amd64.deb ...
185s Unpacking r-cran-xfun (0.55+dfsg-1) ...
185s Selecting previously unselected package r-cran-highr.
185s Preparing to unpack .../257-r-cran-highr_0.11+dfsg-1_all.deb ...
185s Unpacking r-cran-highr (0.11+dfsg-1) ...
185s Selecting previously unselected package r-cran-later.
185s Preparing to unpack .../258-r-cran-later_1.4.1+dfsg-1_amd64.deb ...
185s Unpacking r-cran-later (1.4.1+dfsg-1) ...
185s Selecting previously unselected package r-cran-promises.
185s Preparing to unpack .../259-r-cran-promises_1.3.2+dfsg-1_amd64.deb ...
185s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
185s Selecting previously unselected package r-cran-httpuv.
185s Preparing to unpack .../260-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ...
185s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
185s Selecting previously unselected package libjs-mathjax.
185s Preparing to unpack .../261-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ...
185s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ...
186s Selecting previously unselected package r-cran-knitr.
186s Preparing to unpack .../262-r-cran-knitr_1.51+dfsg-1_all.deb ...
186s Unpacking r-cran-knitr (1.51+dfsg-1) ...
186s Selecting previously unselected package r-cran-lazyeval.
186s Preparing to unpack .../263-r-cran-lazyeval_0.2.2-1build2_amd64.deb ...
186s Unpacking r-cran-lazyeval (0.2.2-1build2) ...
186s Selecting previously unselected package r-cran-pkgbuild.
186s Preparing to unpack .../264-r-cran-pkgbuild_1.4.8-1_all.deb ...
186s Unpacking r-cran-pkgbuild (1.4.8-1) ...
186s Selecting previously unselected package r-cran-rprojroot.
186s Preparing to unpack .../265-r-cran-rprojroot_2.1.1-1_all.deb ...
186s Unpacking r-cran-rprojroot (2.1.1-1) ...
186s Selecting previously unselected package r-cran-pkgload.
186s Preparing to unpack .../266-r-cran-pkgload_1.4.1-1_all.deb ...
186s Unpacking r-cran-pkgload (1.4.1-1) ...
186s Selecting previously unselected package r-cran-praise.
186s Preparing to unpack .../267-r-cran-praise_1.0.0-4build2_all.deb ...
186s Unpacking r-cran-praise (1.0.0-4build2) ...
186s Selecting previously unselected package r-cran-tinytex.
186s Preparing to unpack .../268-r-cran-tinytex_0.58-1_all.deb ...
186s Unpacking r-cran-tinytex (0.58-1) ...
186s Selecting previously unselected package libjs-modernizr.
186s Preparing to unpack .../269-libjs-modernizr_3.13.0-0.1build1_all.deb ...
186s Unpacking libjs-modernizr (3.13.0-0.1build1) ...
186s Selecting previously unselected package r-cran-xtable.
186s Preparing to unpack .../270-r-cran-xtable_1%3a1.8-4-2build1_all.deb ...
186s Unpacking r-cran-xtable (1:1.8-4-2build1) ...
186s Selecting previously unselected package r-cran-sourcetools.
186s Preparing to unpack .../271-r-cran-sourcetools_0.1.7-1-1_amd64.deb ...
186s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
186s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
186s Preparing to unpack .../272-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
186s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
186s Selecting previously unselected package r-cran-shiny.
186s Preparing to unpack .../273-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
186s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
186s Selecting previously unselected package r-cran-rmarkdown.
186s Preparing to unpack .../274-r-cran-rmarkdown_2.30+dfsg-1_all.deb ...
186s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ...
186s Selecting previously unselected package r-cran-waldo.
186s Preparing to unpack .../275-r-cran-waldo_0.6.2-1_all.deb ...
186s Unpacking r-cran-waldo (0.6.2-1) ...
186s Selecting previously unselected package r-cran-testthat.
186s Preparing to unpack .../276-r-cran-testthat_3.2.3-1_amd64.deb ...
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189s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ...
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189s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
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189s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ...
189s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
189s Setting up r-cran-testthat (3.2.3-1) ...
189s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
189s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
189s Setting up r-cran-readr (2.1.6-1) ...
189s Setting up r-cran-tidyr (1.3.1-1) ...
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189s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ...
189s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ...
189s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
189s Setting up r-cran-airr (1.5.0+dfsg-1) ...
189s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
189s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ...
189s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
189s Setting up r-bioc-genomicalignments (1.42.0-2) ...
189s Setting up r-cran-alakazam (1.3.0-1) ...
189s Setting up r-cran-tigger (1.1.0-2) ...
189s Processing triggers for man-db (2.13.1-1build1) ...
190s Processing triggers for install-info (7.2-5) ...
190s Processing triggers for libc-bin (2.42-2ubuntu4) ...
191s autopkgtest [06:03:17]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
191s autopkgtest [06:03:17]: test pkg-r-autopkgtest: [-----------------------
191s Test: Try to load the R library tigger
191s 
191s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
191s Copyright (C) 2025 The R Foundation for Statistical Computing
191s Platform: x86_64-pc-linux-gnu
191s 
191s R is free software and comes with ABSOLUTELY NO WARRANTY.
191s You are welcome to redistribute it under certain conditions.
191s Type 'license()' or 'licence()' for distribution details.
191s 
191s R is a collaborative project with many contributors.
191s Type 'contributors()' for more information and
191s 'citation()' on how to cite R or R packages in publications.
191s 
191s Type 'demo()' for some demos, 'help()' for on-line help, or
191s 'help.start()' for an HTML browser interface to help.
191s Type 'q()' to quit R.
191s 
191s > library('tigger')
191s Loading required package: ggplot2
197s To cite package ‘tigger’ in publications use:
197s 
197s   Gadala-Maria D, Yaari G, Uduman M, Kleinstein S (2015). “Automated
197s   analysis of high-throughput B cell sequencing data reveals a high
197s   frequency of novel immunoglobulin V gene segment alleles.”
197s   _Proceedings of the National Academy of Sciency of the United States
197s   of America_, E862-70. doi:10.1073/pnas.1417683112
197s   <https://doi.org/10.1073/pnas.1417683112>.
197s 
197s   Gadala-Maria D, Gidoni M, Marquez S, Vander Heiden J, Kos J, Watson
197s   C, O'connor K, Yaari G, Kleinstein S (2019). “Identification of
197s   Subject-Specific Immunoglobulin Alleles From Expressed Repertoire
197s   Sequencing Data.” _Frontiers in Immunology_, 129.
197s   doi:10.3389/fimmu.2019.00129
197s   <https://doi.org/10.3389/fimmu.2019.00129>.
197s 
197s To see these entries in BibTeX format, use 'format(<citation>,
197s bibtex=TRUE)', or 'toBibtex(.)'.
197s > 
197s autopkgtest [06:03:23]: test pkg-r-autopkgtest: -----------------------]
197s autopkgtest [06:03:23]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
197s pkg-r-autopkgtest    PASS
198s autopkgtest [06:03:24]: @@@@@@@@@@@@@@@@@@@@ summary
198s pkg-r-autopkgtest    PASS