0s autopkgtest [05:55:50]: starting date and time: 2026-02-10 05:55:50+0000 0s autopkgtest [05:55:50]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [05:55:50]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.3x_c3jxq/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-cran-stars --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-28.secgroup --name adt-resolute-amd64-r-cran-stars-20260210-055550-juju-7f2275-prod-proposed-migration-environment-15-d0eb6c1c-fd00-4665-922a-cf4e1e011d6a --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-amd64-r-cran-stars-20260210-055550-juju-7f2275-prod-proposed-migration-environment-15-d0eb6c1c-fd00-4665-922a-cf4e1e011d6a from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)... 71s autopkgtest [05:57:01]: testbed dpkg architecture: amd64 71s autopkgtest [05:57:01]: testbed apt version: 3.1.14 72s autopkgtest [05:57:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup 72s autopkgtest [05:57:02]: testbed release detected to be: None 72s autopkgtest [05:57:02]: updating testbed package index (apt update) 73s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 73s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 73s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 73s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 73s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [178 kB] 73s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1727 kB] 73s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB] 73s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [219 kB] 73s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [266 kB] 73s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [6184 B] 73s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B] 73s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1787 kB] 73s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [792 kB] 73s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.5 kB] 73s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB] 73s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B] 73s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B] 74s Fetched 5197 kB in 1s (6519 kB/s) 74s Reading package lists... 75s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 75s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 75s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 75s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 76s Reading package lists... 76s Reading package lists... 76s Building dependency tree... 76s Reading state information... 76s Calculating upgrade... 76s The following package was automatically installed and is no longer required: 76s libpython3.13 76s Use 'sudo apt autoremove' to remove it. 76s The following NEW packages will be installed: 76s gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib 76s linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic 76s linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic 76s linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic 76s The following packages will be upgraded: 76s 3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static 76s cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common 76s dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install 76s ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2 76s iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbrotli1 libbsd0 76s libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common 76s libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64 76s libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0 76s libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0 76s libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64 76s libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0 76s libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic 76s linux-headers-virtual linux-image-generic linux-image-virtual linux-perf 76s linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids 76s pollinate python3-linkify-it python3-markdown-it python3-referencing sed 76s shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget 76s 91 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. 76s Need to get 237 MB of archives. 76s After this operation, 339 MB of additional disk space will be used. 76s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB] 76s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB] 76s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB] 76s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB] 76s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB] 76s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB] 76s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB] 76s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB] 76s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB] 76s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB] 76s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB] 76s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB] 77s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB] 77s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB] 77s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB] 77s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B] 77s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB] 77s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB] 77s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB] 77s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB] 77s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB] 77s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB] 77s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB] 77s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB] 77s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB] 77s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB] 77s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB] 77s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB] 77s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB] 77s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB] 77s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB] 77s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB] 77s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB] 77s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB] 77s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB] 77s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB] 77s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB] 77s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB] 77s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB] 77s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB] 77s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB] 77s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB] 77s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB] 77s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB] 77s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B] 77s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB] 77s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB] 77s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB] 77s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB] 77s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB] 77s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB] 77s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB] 77s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB] 77s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB] 77s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB] 77s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B] 77s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB] 77s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB] 77s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B] 77s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB] 77s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB] 77s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB] 77s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB] 77s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB] 77s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB] 77s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB] 77s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB] 77s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB] 77s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB] 77s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B] 77s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB] 77s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli1 amd64 1.2.0-3 [343 kB] 77s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB] 77s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB] 77s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B] 77s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB] 77s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B] 77s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB] 77s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB] 77s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB] 77s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB] 77s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB] 77s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB] 81s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB] 81s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB] 81s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B] 81s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB] 81s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B] 81s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB] 81s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B] 81s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB] 82s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB] 82s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB] 82s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB] 82s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB] 82s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB] 82s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B] 82s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB] 82s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB] 82s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 82s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB] 82s dpkg-preconfigure: unable to re-open stdin: No such file or directory 82s Fetched 237 MB in 6s (39.9 MB/s) 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 82s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ... 82s Unpacking debianutils (5.23.2build1) over (5.23.2) ... 82s Setting up debianutils (5.23.2build1) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ... 83s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ... 83s Setting up dash (0.5.12-12ubuntu3) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ... 83s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ... 83s Setting up findutils (4.10.0-3build2) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../sed_4.9-2build3_amd64.deb ... 83s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 83s Setting up sed (4.9-2build3) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ... 83s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ... 83s Setting up tar (1.35+dfsg-3.1build2) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ... 83s Unpacking libattr1:amd64 (1:2.5.2-3build2) over (1:2.5.2-3build1) ... 83s Setting up libattr1:amd64 (1:2.5.2-3build2) ... 83s Selecting previously unselected package gcc-16-base:amd64. 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../gcc-16-base_16-20260208-1ubuntu1_amd64.deb ... 83s Unpacking gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 83s Setting up gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 83s (Reading database ... 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Setting up libgdbm-compat4t64:amd64 (1.26-1build1) ... 90s Setting up bpftool (7.7.0+6.19.0-3.3) ... 90s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ... 90s Setting up liblsof0 (4.99.4+dfsg-2build2) ... 90s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ... 90s Setting up libbrotli1:amd64 (1.2.0-3) ... 90s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ... 90s Setting up libsensors-config (1:3.6.2-2build1) ... 90s Setting up less (668-1build1) ... 90s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ... 90s Setting up libidn2-0:amd64 (2.3.8-4build1) ... 90s Setting up amd64-microcode (3.20251202.1ubuntu1) ... 90s amd64-microcode: microcode will be updated at next boot 90s Setting up man-db (2.13.1-1build1) ... 90s Updating database of manual pages ... 92s man-db.service is a disabled or a static unit not running, not starting it. 92s Setting up libjansson4:amd64 (2.14-2build4) ... 92s Setting up libglib2.0-data (2.87.2-2) ... 92s Setting up pollinate (4.33-4ubuntu5) ... 102s Setting up busybox-static (1:1.37.0-7ubuntu1) ... 102s Setting up libwrap0:amd64 (7.6.q-36build2) ... 102s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ... 103s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic 103s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic 103s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ... 103s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ... 103s Setting up patch (2.8-2build1) ... 103s Setting up libsensors5:amd64 (1:3.6.2-2build1) ... 103s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ... 103s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ... 103s Setting up lsof (4.99.4+dfsg-2build2) ... 103s Setting up libpci3:amd64 (1:3.14.0-1build2) ... 103s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ... 103s Setting up dracut-install (109-11ubuntu1) ... 103s Setting up dmsetup (2:1.02.205-2ubuntu3) ... 103s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ... 103s Setting up pnp.ids (0.394-1build1) ... 103s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ... 103s Setting up python3-linkify-it (2.0.3-1ubuntu3) ... 103s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ... 103s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ... 103s Setting up mawk (1.3.4.20260129-1) ... 103s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ... 103s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ... 103s Setting up linux-image-virtual (6.19.0-3.3) ... 103s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ... 103s Setting up libbsd0:amd64 (0.12.2-2build2) ... 103s Setting up libdrm-common (2.4.131-1) ... 103s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ... 103s Setting up dbus-bin (1.16.2-2ubuntu3) ... 103s Setting up libonig5:amd64 (6.9.10-1build1) ... 103s Setting up libbpf1:amd64 (1:1.6.2-1build1) ... 103s Setting up ethtool (1:6.15-3build1) ... 103s Setting up python3-referencing (0.36.2-1ubuntu2) ... 103s Setting up libxkbcommon0:amd64 (1.13.1-1) ... 103s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 103s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ... 103s Setting up tcpdump (4.99.5-2ubuntu3) ... 104s Setting up linux-image-generic (6.19.0-3.3) ... 104s Setting up wget (1.25.0-2ubuntu4) ... 104s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ... 104s Setting up iptables (1.8.11-2ubuntu3) ... 104s Setting up iproute2 (6.18.0-1ubuntu1) ... 104s Setting up linux-headers-generic (6.19.0-3.3) ... 104s Setting up dbus-daemon (1.16.2-2ubuntu3) ... 104s Setting up hwdata (0.394-1build1) ... 104s Setting up dbus-user-session (1.16.2-2ubuntu3) ... 104s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ... 104s No schema files found: doing nothing. 104s Setting up dbus (1.16.2-2ubuntu3) ... 104s A reboot is required to replace the running dbus-daemon. 104s Please reboot the system when convenient. 104s Setting up shared-mime-info (2.4-5build3) ... 105s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ... 105s Setting up pciutils (1:3.14.0-1build2) ... 105s Setting up python3-markdown-it (3.0.0-3build1) ... 105s Setting up libdrm2:amd64 (2.4.131-1) ... 105s Setting up libpython3.14:amd64 (3.14.2-1) ... 105s Setting up libapt-pkg7.0:amd64 (3.1.15) ... 105s Setting up linux-tools-common (6.19.0-3.3) ... 105s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ... 105s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ... 105s Setting up apt (3.1.15) ... 105s Setting up linux-headers-virtual (6.19.0-3.3) ... 105s Setting up linux-generic (6.19.0-3.3) ... 105s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ... 105s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ... 105s Setting up ubuntu-standard (1.564) ... 105s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ... 105s Setting up linux-virtual (6.19.0-3.3) ... 105s Setting up linux-perf (6.19.0-3.3) ... 105s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ... 105s Processing triggers for debianutils (5.23.2build1) ... 105s Processing triggers for install-info (7.2-5) ... 105s Processing triggers for initramfs-tools (0.150ubuntu7) ... 105s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 110s Processing triggers for libc-bin (2.42-2ubuntu4) ... 110s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ... 110s /etc/kernel/postinst.d/initramfs-tools: 110s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic 114s /etc/kernel/postinst.d/zz-update-grub: 114s Sourcing file `/etc/default/grub' 114s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 114s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 114s Generating grub configuration file ... 114s Found linux image: /boot/vmlinuz-6.19.0-3-generic 114s Found initrd image: /boot/initrd.img-6.19.0-3-generic 114s Found linux image: /boot/vmlinuz-6.18.0-9-generic 114s Found initrd image: /boot/initrd.img-6.18.0-9-generic 114s Warning: os-prober will not be executed to detect other bootable partitions. 114s Systems on them will not be added to the GRUB boot configuration. 114s Check GRUB_DISABLE_OS_PROBER documentation entry. 114s Adding boot menu entry for UEFI Firmware Settings ... 114s done 114s autopkgtest [05:57:44]: upgrading testbed (apt dist-upgrade and autopurge) 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 115s Calculating upgrade... 115s The following package was automatically installed and is no longer required: 115s libpython3.13 115s Use 'sudo apt autoremove' to remove it. 115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 115s Solving dependencies... 115s The following packages will be REMOVED: 115s libpython3.13* 116s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 116s After this operation, 7599 kB disk space will be freed. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125273 files and directories currently installed.) 116s Removing libpython3.13:amd64 (3.13.11-1) ... 116s Processing triggers for libc-bin (2.42-2ubuntu4) ... 116s autopkgtest [05:57:46]: rebooting testbed after setup commands that affected boot 144s autopkgtest [05:58:14]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026 146s autopkgtest [05:58:16]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-stars 147s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.7-0-1 (dsc) [2807 B] 147s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.7-0-1 (tar) [4031 kB] 147s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-stars 0.7-0-1 (diff) [4448 B] 148s gpgv: Signature made Fri Feb 6 08:25:16 2026 UTC 148s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 148s gpgv: issuer "plessy@debian.org" 148s gpgv: Can't check signature: No public key 148s dpkg-source: warning: cannot verify inline signature for ./r-cran-stars_0.7-0-1.dsc: no acceptable signature found 148s autopkgtest [05:58:18]: testing package r-cran-stars version 0.7-0-1 149s autopkgtest [05:58:19]: build not needed 151s autopkgtest [05:58:21]: test run-unit-test: preparing testbed 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Solving dependencies... 152s The following NEW packages will be installed: 152s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 152s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data 152s gdal-plugins javascript-common libabsl20260107 libaec0 libaom3 152s libarmadillo15 libarpack2t64 libavif16 libblas3 libblosc1 libcairo2 152s libcfitsio10t64 libdatrie1 libdav1d7 libde265-0 libdeflate0 libfontconfig1 152s libfreexl1 libfyba0t64 libgav1-2 libgdal38 libgeos-c1t64 libgeos3.14.1 152s libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 152s libharfbuzz0b libhdf4-0 libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 152s libheif-plugin-libde265 libheif1 libhwy1t64 libice6 libjbig0 libjpeg-turbo8 152s libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 152s libjs-highlight.js libjs-jquery libjs-jquery-datatables 152s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 152s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 152s libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 libkmlbase1t64 152s libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 152s liblua5.4-0 libminizip1t64 libmuparser2v5 libmysqlclient24 libnetcdf22 152s libodbc2 libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 152s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libpoppler147 152s libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 152s libspatialite8t64 libsuperlu7 libsz2 libtcl8.6 libthai-data libthai0 152s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 152s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 152s libxt6t64 libyuv0 mysql-common node-bootstrap-sass node-html5shiv 152s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 152s r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio 152s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-cftime 152s r-cran-class r-cran-classint r-cran-cli r-cran-clue r-cran-cluster 152s r-cran-codetools r-cran-collapse r-cran-commonmark r-cran-covr r-cran-cpp11 152s r-cran-crayon r-cran-cubelyr r-cran-curl r-cran-dbi r-cran-deldir 152s r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 152s r-cran-evaluate r-cran-exactextractr r-cran-fansi r-cran-farver 152s r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula r-cran-fs 152s r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 152s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 152s r-cran-gridextra r-cran-gstat r-cran-gtable r-cran-highr r-cran-htmltools 152s r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib 152s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later 152s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv 152s r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata 152s r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise 152s r-cran-mgcv r-cran-mime r-cran-misctools r-cran-ncdfgeom r-cran-ncmeta 152s r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict 152s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 152s r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx 152s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6 152s r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils 152s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex 152s r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot 152s r-cran-s2 r-cran-s7 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf 152s r-cran-sftime r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime 152s r-cran-spatstat r-cran-spatstat.data r-cran-spatstat.explore 152s r-cran-spatstat.geom r-cran-spatstat.linnet r-cran-spatstat.model 152s r-cran-spatstat.random r-cran-spatstat.sparse r-cran-spatstat.univar 152s r-cran-spatstat.utils r-cran-stars r-cran-stringi r-cran-stringr 152s r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor r-cran-terra 152s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 152s r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs r-cran-viridis 152s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk r-cran-xfun 152s r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip 152s x11-common xdg-utils zip 152s 0 upgraded, 293 newly installed, 0 to remove and 0 not upgraded. 152s Need to get 299 MB of archives. 152s After this operation, 781 MB of additional disk space will be used. 152s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 152s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB] 152s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB] 152s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB] 152s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB] 152s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 152s Get:7 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 152s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 152s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-data all 3.12.1+dfsg-1 [278 kB] 152s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-plugins amd64 3.12.1+dfsg-1 [26.8 kB] 152s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B] 152s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libabsl20260107 amd64 20260107.0-1 [587 kB] 152s Get:13 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB] 152s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libaom3 amd64 3.13.1-2 [1970 kB] 152s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 152s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB] 152s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 152s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2t64 amd64 3.9.1-6 [108 kB] 152s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu7 amd64 7.0.1+dfsg1-2 [186 kB] 152s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarmadillo15 amd64 1:15.2.1+dfsg-2 [109 kB] 152s Get:21 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdav1d7 amd64 1.5.3-1 [626 kB] 152s Get:22 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgav1-2 amd64 0.20.0-2build1 [402 kB] 152s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB] 152s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B] 152s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libyuv0 amd64 0.0.1922.20260106-1 [184 kB] 152s Get:26 http://ftpmaster.internal/ubuntu resolute/universe amd64 libavif16 amd64 1.3.0-1ubuntu3 [117 kB] 152s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.8 kB] 152s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc1 amd64 1.21.5+ds-2 [35.8 kB] 152s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB] 152s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB] 152s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B] 152s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 152s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB] 153s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcfitsio10t64 amd64 4.6.3-1 [549 kB] 153s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB] 153s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libde265-0 amd64 1.0.16-1build1 [172 kB] 153s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB] 153s Get:38 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfyba0t64 amd64 4.1.1-11build2 [120 kB] 153s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [23.5 kB] 153s Get:40 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfreexl1 amd64 2.0.0-1build3 [42.9 kB] 153s Get:41 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos3.14.1 amd64 3.14.1-2 [976 kB] 153s Get:42 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos-c1t64 amd64 3.14.1-2 [116 kB] 153s Get:43 http://ftpmaster.internal/ubuntu resolute/universe amd64 proj-data all 9.7.1-1 [7950 kB] 153s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB] 153s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB] 153s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB] 153s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB] 153s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 153s Get:49 http://ftpmaster.internal/ubuntu resolute/universe amd64 libproj25 amd64 9.7.1-1 [1499 kB] 153s Get:50 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeotiff5 amd64 1.7.4-1build1 [61.5 kB] 153s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libgif7 amd64 5.2.2-1ubuntu3 [36.0 kB] 153s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB] 153s Get:53 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf4-0 amd64 4.3.1-2 [318 kB] 153s Get:54 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB] 153s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-aomdec amd64 1.21.2-1 [14.2 kB] 153s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-libde265 amd64 1.21.2-1 [9978 B] 153s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif1 amd64 1.21.2-1 [544 kB] 153s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwy1t64 amd64 1.3.0-2 [768 kB] 153s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 liblcms2-2 amd64 2.17-1 [170 kB] 153s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libjxl0.11 amd64 0.11.1-6ubuntu1 [1122 kB] 153s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB] 153s Get:62 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlbase1t64 amd64 1.3.0-13 [51.7 kB] 153s Get:63 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmldom1t64 amd64 1.3.0-13 [156 kB] 153s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlengine1t64 amd64 1.3.0-13 [74.1 kB] 153s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB] 153s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmuparser2v5 amd64 2.3.4-2 [143 kB] 153s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 153s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libmysqlclient24 amd64 8.4.8-0ubuntu1 [1258 kB] 153s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB] 154s Get:70 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnetcdf22 amd64 1:4.9.3-1build1 [561 kB] 154s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl7 amd64 2.5.4-9 [43.7 kB] 154s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbc2 amd64 2.3.14-1 [160 kB] 154s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 unixodbc-common all 2.3.14-1 [8792 B] 154s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbcinst2 amd64 2.3.14-1 [32.0 kB] 154s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libopenjp2-7 amd64 2.5.4-1 [188 kB] 154s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpgmepp6t64 amd64 1.24.2-3ubuntu2 [124 kB] 154s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libpoppler147 amd64 25.03.0-11.1 [1224 kB] 154s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpq5 amd64 18.1-2 [155 kB] 154s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqhull-r8.0 amd64 2020.2-8 [197 kB] 154s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 librttopo1 amd64 1.1.0-4build1 [189 kB] 154s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspatialite8t64 amd64 5.1.0-3ubuntu1 [1927 kB] 154s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3build2 [991 kB] 154s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgdal38 amd64 3.12.1+dfsg-1 [11.4 MB] 154s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB] 154s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB] 154s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 154s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB] 154s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 154s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 154s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 154s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB] 154s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 154s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 154s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 154s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 154s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 154s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 154s Get:98 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 154s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 154s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 154s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 154s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB] 154s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB] 154s Get:104 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB] 154s Get:105 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB] 154s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB] 154s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB] 154s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB] 154s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB] 154s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB] 155s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB] 155s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB] 155s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B] 155s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 155s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-data all 2.2.28-8 [19.3 kB] 155s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-0 amd64 2.2.28-8 [54.6 kB] 155s Get:117 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB] 155s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 155s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 155s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 155s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 155s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB] 156s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB] 156s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB] 156s Get:125 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 156s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB] 158s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 158s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 158s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB] 158s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 158s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB] 158s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 158s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 158s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 158s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 158s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 158s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 158s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB] 158s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 158s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 158s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 158s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 158s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 158s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 158s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB] 158s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 158s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 158s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-e1071 amd64 1.7-17-1 [579 kB] 158s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB] 158s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-classint amd64 0.4-11+dfsg-1 [108 kB] 158s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB] 159s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB] 159s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 159s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB] 159s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB] 159s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s2 amd64 1.1.9-1build1 [1815 kB] 159s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-units amd64 0.8-7+dfsg-2 [300 kB] 159s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sf amd64 1.0-19+dfsg-2build2 [3298 kB] 159s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 159s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 159s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 159s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB] 159s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB] 159s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 159s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 159s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 159s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB] 159s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 159s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 159s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 159s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 159s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 159s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 159s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB] 159s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 159s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 159s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 159s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 159s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 159s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 159s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cftime all 1.7.2-1 [918 kB] 159s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cluster amd64 2.1.8.2-1 [570 kB] 159s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clue amd64 0.3-66-1 [968 kB] 160s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 160s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-collapse amd64 2.1.0-1 [3485 kB] 160s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB] 160s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB] 160s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rex all 1.2.1-1build1 [126 kB] 160s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB] 160s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 160s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 160s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 160s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 160s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-covr amd64 3.6.4+dfsg-1 [303 kB] 160s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB] 160s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cubelyr all 1.0.2-1 [347 kB] 160s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 160s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 160s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB] 160s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB] 160s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB] 160s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB] 160s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-terra amd64 1.8-70-1build2 [4344 kB] 160s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-raster amd64 3.6-31-2 [3174 kB] 160s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-exactextractr amd64 0.10.0-1build2 [578 kB] 160s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 160s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 160s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 160s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formula all 1.2-5-1 [158 kB] 160s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-globals all 0.19.0-1 [160 kB] 160s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 160s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB] 160s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 160s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 160s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 160s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 160s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB] 160s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 160s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 160s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB] 161s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB] 161s Get:222 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 161s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tweenr amd64 2.0.3-1 [410 kB] 161s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 161s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB] 161s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB] 161s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 161s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggforce amd64 0.4.2-1 [1777 kB] 161s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB] 161s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 161s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggthemes all 5.2.0-1 [760 kB] 161s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-goftest amd64 1.2-3-1build1 [60.5 kB] 161s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB] 161s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-zoo amd64 1.8-15-1 [1025 kB] 161s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sftime all 0.2-0-6 [168 kB] 161s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xts amd64 0.14.1-1 [1198 kB] 161s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-intervals amd64 0.15.5-1 [602 kB] 161s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spacetime all 1.3-3-2 [2780 kB] 162s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stars all 0.7-0-1 [4415 kB] 162s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gstat amd64 2.1-3-2 [2334 kB] 162s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB] 162s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 162s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 162s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 162s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 162s Get:246 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 162s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 162s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lmtest amd64 0.9.40-1build1 [400 kB] 162s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lwgeom amd64 0.2-14-1 [463 kB] 162s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-maps amd64 3.4.2.1-1 [2352 kB] 162s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mapdata amd64 2.3.1-1 [23.5 MB] 163s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB] 163s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sandwich all 3.1-1-1build1 [1483 kB] 163s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-maxlik all 1.5-2.2-1 [1115 kB] 163s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB] 163s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB] 163s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rnetcdf amd64 2.9-2-1 [254 kB] 163s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 163s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ncmeta all 0.4.0-1 [362 kB] 163s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 163s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 164s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pcict amd64 0.5-4.4-1 [94.4 kB] 164s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 164s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB] 164s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB] 164s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 164s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB] 164s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plm all 2.6-7-1 [1823 kB] 164s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 164s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-randomforest amd64 4.7-1.2-1 [216 kB] 164s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB] 164s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 164s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 164s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 164s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 164s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 164s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 164s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB] 164s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB] 164s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.utils amd64 3.1-3-1 [387 kB] 165s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.data all 3.1-6-1 [4153 kB] 165s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.univar amd64 3.1-2-1 [315 kB] 165s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.geom amd64 3.3-6-1 [3968 kB] 165s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.random amd64 3.3-3-1 [1177 kB] 165s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tensor all 1.5-4build1 [16.3 kB] 165s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB] 165s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.explore amd64 3.3-4-1 [3347 kB] 165s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.model amd64 3.3-4-1 [3397 kB] 165s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.linnet amd64 3.2-5-1 [1509 kB] 165s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat amd64 3.3-1-1 [4121 kB] 165s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB] 165s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 165s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 165s Preconfiguring packages ... 166s Fetched 299 MB in 14s (22.0 MB/s) 166s Selecting previously unselected package fonts-dejavu-mono. 166s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125269 files and directories currently installed.) 166s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ... 166s Unpacking fonts-dejavu-mono (2.37-8build1) ... 166s Selecting previously unselected package fonts-dejavu-core. 166s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ... 166s Unpacking fonts-dejavu-core (2.37-8build1) ... 166s Selecting previously unselected package fontconfig-config. 166s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ... 166s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 166s Selecting previously unselected package libfontconfig1:amd64. 166s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ... 166s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ... 166s Selecting previously unselected package fontconfig. 166s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_amd64.deb ... 166s Unpacking fontconfig (2.17.1-3ubuntu1) ... 166s Selecting previously unselected package fonts-font-awesome. 166s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 166s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 166s Selecting previously unselected package fonts-glyphicons-halflings. 166s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 166s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 166s Selecting previously unselected package fonts-mathjax. 166s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 166s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 166s Selecting previously unselected package gdal-data. 166s Preparing to unpack .../008-gdal-data_3.12.1+dfsg-1_all.deb ... 166s Unpacking gdal-data (3.12.1+dfsg-1) ... 166s Selecting previously unselected package gdal-plugins:amd64. 166s Preparing to unpack .../009-gdal-plugins_3.12.1+dfsg-1_amd64.deb ... 166s Unpacking gdal-plugins:amd64 (3.12.1+dfsg-1) ... 166s Selecting previously unselected package javascript-common. 166s Preparing to unpack .../010-javascript-common_12+nmu1build1_all.deb ... 166s Unpacking javascript-common (12+nmu1build1) ... 166s Selecting previously unselected package libabsl20260107:amd64. 166s Preparing to unpack .../011-libabsl20260107_20260107.0-1_amd64.deb ... 166s Unpacking libabsl20260107:amd64 (20260107.0-1) ... 166s Selecting previously unselected package libaec0:amd64. 166s Preparing to unpack .../012-libaec0_1.1.5-1_amd64.deb ... 166s Unpacking libaec0:amd64 (1.1.5-1) ... 166s Selecting previously unselected package libaom3:amd64. 166s Preparing to unpack .../013-libaom3_3.13.1-2_amd64.deb ... 166s Unpacking libaom3:amd64 (3.13.1-2) ... 166s Selecting previously unselected package libblas3:amd64. 166s Preparing to unpack .../014-libblas3_3.12.1-7ubuntu1_amd64.deb ... 166s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ... 166s Selecting previously unselected package libgfortran5:amd64. 166s Preparing to unpack .../015-libgfortran5_16-20260208-1ubuntu1_amd64.deb ... 166s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ... 166s Selecting previously unselected package liblapack3:amd64. 166s Preparing to unpack .../016-liblapack3_3.12.1-7ubuntu1_amd64.deb ... 166s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ... 166s Selecting previously unselected package libarpack2t64:amd64. 166s Preparing to unpack .../017-libarpack2t64_3.9.1-6_amd64.deb ... 166s Unpacking libarpack2t64:amd64 (3.9.1-6) ... 166s Selecting previously unselected package libsuperlu7:amd64. 166s Preparing to unpack .../018-libsuperlu7_7.0.1+dfsg1-2_amd64.deb ... 166s Unpacking libsuperlu7:amd64 (7.0.1+dfsg1-2) ... 166s Selecting previously unselected package libarmadillo15. 166s Preparing to unpack .../019-libarmadillo15_1%3a15.2.1+dfsg-2_amd64.deb ... 166s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 166s Selecting previously unselected package libdav1d7:amd64. 166s Preparing to unpack .../020-libdav1d7_1.5.3-1_amd64.deb ... 166s Unpacking libdav1d7:amd64 (1.5.3-1) ... 166s Selecting previously unselected package libgav1-2:amd64. 166s Preparing to unpack .../021-libgav1-2_0.20.0-2build1_amd64.deb ... 166s Unpacking libgav1-2:amd64 (0.20.0-2build1) ... 166s Selecting previously unselected package libjpeg-turbo8:amd64. 166s Preparing to unpack .../022-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ... 166s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ... 166s Selecting previously unselected package libjpeg8:amd64. 166s Preparing to unpack .../023-libjpeg8_8c-2ubuntu12_amd64.deb ... 166s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ... 166s Selecting previously unselected package libyuv0:amd64. 166s Preparing to unpack .../024-libyuv0_0.0.1922.20260106-1_amd64.deb ... 166s Unpacking libyuv0:amd64 (0.0.1922.20260106-1) ... 166s Selecting previously unselected package libavif16:amd64. 166s Preparing to unpack .../025-libavif16_1.3.0-1ubuntu3_amd64.deb ... 166s Unpacking libavif16:amd64 (1.3.0-1ubuntu3) ... 166s Selecting previously unselected package libsnappy1v5:amd64. 166s Preparing to unpack .../026-libsnappy1v5_1.2.2-2_amd64.deb ... 166s Unpacking libsnappy1v5:amd64 (1.2.2-2) ... 166s Selecting previously unselected package libblosc1:amd64. 166s Preparing to unpack .../027-libblosc1_1.21.5+ds-2_amd64.deb ... 166s Unpacking libblosc1:amd64 (1.21.5+ds-2) ... 166s Selecting previously unselected package libpixman-1-0:amd64. 166s Preparing to unpack .../028-libpixman-1-0_0.46.4-1_amd64.deb ... 166s Unpacking libpixman-1-0:amd64 (0.46.4-1) ... 166s Selecting previously unselected package libxcb-render0:amd64. 166s Preparing to unpack .../029-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ... 166s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ... 166s Selecting previously unselected package libxcb-shm0:amd64. 166s Preparing to unpack .../030-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ... 166s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ... 166s Selecting previously unselected package libxrender1:amd64. 166s Preparing to unpack .../031-libxrender1_1%3a0.9.12-1_amd64.deb ... 166s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 166s Selecting previously unselected package libcairo2:amd64. 166s Preparing to unpack .../032-libcairo2_1.18.4-3_amd64.deb ... 166s Unpacking libcairo2:amd64 (1.18.4-3) ... 166s Selecting previously unselected package libcfitsio10t64:amd64. 166s Preparing to unpack .../033-libcfitsio10t64_4.6.3-1_amd64.deb ... 166s Unpacking libcfitsio10t64:amd64 (4.6.3-1) ... 166s Selecting previously unselected package libdatrie1:amd64. 166s Preparing to unpack .../034-libdatrie1_0.2.14-1_amd64.deb ... 166s Unpacking libdatrie1:amd64 (0.2.14-1) ... 166s Selecting previously unselected package libde265-0:amd64. 166s Preparing to unpack .../035-libde265-0_1.0.16-1build1_amd64.deb ... 166s Unpacking libde265-0:amd64 (1.0.16-1build1) ... 166s Selecting previously unselected package libdeflate0:amd64. 166s Preparing to unpack .../036-libdeflate0_1.23-2build1_amd64.deb ... 166s Unpacking libdeflate0:amd64 (1.23-2build1) ... 166s Selecting previously unselected package libfyba0t64:amd64. 166s Preparing to unpack .../037-libfyba0t64_4.1.1-11build2_amd64.deb ... 166s Unpacking libfyba0t64:amd64 (4.1.1-11build2) ... 166s Selecting previously unselected package libminizip1t64:amd64. 167s Preparing to unpack .../038-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ... 167s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 167s Selecting previously unselected package libfreexl1:amd64. 167s Preparing to unpack .../039-libfreexl1_2.0.0-1build3_amd64.deb ... 167s Unpacking libfreexl1:amd64 (2.0.0-1build3) ... 167s Selecting previously unselected package libgeos3.14.1:amd64. 167s Preparing to unpack .../040-libgeos3.14.1_3.14.1-2_amd64.deb ... 167s Unpacking libgeos3.14.1:amd64 (3.14.1-2) ... 167s Selecting previously unselected package libgeos-c1t64:amd64. 167s Preparing to unpack .../041-libgeos-c1t64_3.14.1-2_amd64.deb ... 167s Unpacking libgeos-c1t64:amd64 (3.14.1-2) ... 167s Selecting previously unselected package proj-data. 167s Preparing to unpack .../042-proj-data_9.7.1-1_all.deb ... 167s Unpacking proj-data (9.7.1-1) ... 167s Selecting previously unselected package libjbig0:amd64. 167s Preparing to unpack .../043-libjbig0_2.1-6.1ubuntu3_amd64.deb ... 167s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ... 167s Selecting previously unselected package liblerc4:amd64. 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167s Selecting previously unselected package libpoppler147:amd64. 167s Preparing to unpack .../076-libpoppler147_25.03.0-11.1_amd64.deb ... 167s Unpacking libpoppler147:amd64 (25.03.0-11.1) ... 167s Selecting previously unselected package libpq5:amd64. 167s Preparing to unpack .../077-libpq5_18.1-2_amd64.deb ... 167s Unpacking libpq5:amd64 (18.1-2) ... 167s Selecting previously unselected package libqhull-r8.0:amd64. 167s Preparing to unpack .../078-libqhull-r8.0_2020.2-8_amd64.deb ... 167s Unpacking libqhull-r8.0:amd64 (2020.2-8) ... 167s Selecting previously unselected package librttopo1:amd64. 167s Preparing to unpack .../079-librttopo1_1.1.0-4build1_amd64.deb ... 167s Unpacking librttopo1:amd64 (1.1.0-4build1) ... 167s Selecting previously unselected package libspatialite8t64:amd64. 167s Preparing to unpack .../080-libspatialite8t64_5.1.0-3ubuntu1_amd64.deb ... 167s Unpacking libspatialite8t64:amd64 (5.1.0-3ubuntu1) ... 167s Selecting previously unselected package libxerces-c3.2t64:amd64. 167s Preparing to unpack .../081-libxerces-c3.2t64_3.2.4+debian-1.3build2_amd64.deb ... 167s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3build2) ... 167s Selecting previously unselected package libgdal38:amd64. 167s Preparing to unpack .../082-libgdal38_3.12.1+dfsg-1_amd64.deb ... 167s Unpacking libgdal38:amd64 (3.12.1+dfsg-1) ... 167s Selecting previously unselected package libgraphite2-3:amd64. 167s Preparing to unpack .../083-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ... 167s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ... 167s Selecting previously unselected package libharfbuzz0b:amd64. 167s Preparing to unpack .../084-libharfbuzz0b_12.3.2-1_amd64.deb ... 167s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ... 167s Selecting previously unselected package x11-common. 167s Preparing to unpack .../085-x11-common_1%3a7.7+24ubuntu1_all.deb ... 167s Unpacking x11-common (1:7.7+24ubuntu1) ... 167s Selecting previously unselected package libice6:amd64. 167s 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previously unselected package libpaper2:amd64. 168s Preparing to unpack .../107-libpaper2_2.2.5-0.3build1_amd64.deb ... 168s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ... 168s Selecting previously unselected package libpaper-utils. 168s Preparing to unpack .../108-libpaper-utils_2.2.5-0.3build1_amd64.deb ... 168s Unpacking libpaper-utils (2.2.5-0.3build1) ... 168s Selecting previously unselected package libsm6:amd64. 168s Preparing to unpack .../109-libsm6_2%3a1.2.6-1build1_amd64.deb ... 168s Unpacking libsm6:amd64 (2:1.2.6-1build1) ... 168s Selecting previously unselected package libtcl8.6:amd64. 168s Preparing to unpack .../110-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ... 168s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ... 168s Selecting previously unselected package libxft2:amd64. 168s Preparing to unpack .../111-libxft2_2.3.6-1build2_amd64.deb ... 168s Unpacking libxft2:amd64 (2.3.6-1build2) ... 168s Selecting previously unselected package libxss1:amd64. 168s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build4_amd64.deb ... 168s Unpacking libxss1:amd64 (1:1.2.3-1build4) ... 168s Selecting previously unselected package libtk8.6:amd64. 168s Preparing to unpack .../113-libtk8.6_8.6.17-1_amd64.deb ... 168s Unpacking libtk8.6:amd64 (8.6.17-1) ... 168s Selecting previously unselected package libudunits2-data. 168s Preparing to unpack .../114-libudunits2-data_2.2.28-8_all.deb ... 168s Unpacking libudunits2-data (2.2.28-8) ... 168s Selecting previously unselected package libudunits2-0:amd64. 168s Preparing to unpack .../115-libudunits2-0_2.2.28-8_amd64.deb ... 168s Unpacking libudunits2-0:amd64 (2.2.28-8) ... 168s Selecting previously unselected package libxt6t64:amd64. 168s Preparing to unpack .../116-libxt6t64_1%3a1.2.1-1.3_amd64.deb ... 168s Unpacking libxt6t64:amd64 (1:1.2.1-1.3) ... 168s Selecting previously unselected package node-bootstrap-sass. 168s Preparing to unpack .../117-node-bootstrap-sass_3.4.3-2_all.deb ... 168s Unpacking node-bootstrap-sass 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.../129-r-cran-glue_1.8.0-1_amd64.deb ... 169s Unpacking r-cran-glue (1.8.0-1) ... 169s Selecting previously unselected package r-cran-rlang. 169s Preparing to unpack .../130-r-cran-rlang_1.1.5-3_amd64.deb ... 169s Unpacking r-cran-rlang (1.1.5-3) ... 169s Selecting previously unselected package r-cran-lifecycle. 169s Preparing to unpack .../131-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 169s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 169s Selecting previously unselected package r-cran-magrittr. 169s Preparing to unpack .../132-r-cran-magrittr_2.0.3-1_amd64.deb ... 169s Unpacking r-cran-magrittr (2.0.3-1) ... 169s Selecting previously unselected package r-cran-utf8. 169s Preparing to unpack .../133-r-cran-utf8_1.2.4-1_amd64.deb ... 169s Unpacking r-cran-utf8 (1.2.4-1) ... 169s Selecting previously unselected package r-cran-vctrs. 169s Preparing to unpack .../134-r-cran-vctrs_0.6.5-1_amd64.deb ... 169s Unpacking r-cran-vctrs (0.6.5-1) ... 169s Selecting previously unselected package r-cran-pillar. 169s Preparing to unpack .../135-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 169s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 169s Selecting previously unselected package r-cran-r6. 169s Preparing to unpack .../136-r-cran-r6_2.6.1-1_all.deb ... 169s Unpacking r-cran-r6 (2.6.1-1) ... 169s Selecting previously unselected package r-cran-fansi. 169s Preparing to unpack .../137-r-cran-fansi_1.0.6-2_amd64.deb ... 169s Unpacking r-cran-fansi (1.0.6-2) ... 169s Selecting previously unselected package r-cran-pkgconfig. 169s Preparing to unpack .../138-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 169s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 169s Selecting previously unselected package r-cran-tibble. 169s Preparing to unpack .../139-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 169s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 169s Selecting previously unselected package r-cran-withr. 169s Preparing to unpack .../140-r-cran-withr_3.0.2+dfsg-1_all.deb ... 169s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 169s Selecting previously unselected package r-cran-tidyselect. 169s Preparing to unpack .../141-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 169s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 169s Selecting previously unselected package r-cran-dplyr. 169s Preparing to unpack .../142-r-cran-dplyr_1.1.4-4_amd64.deb ... 169s Unpacking r-cran-dplyr (1.1.4-4) ... 169s Selecting previously unselected package r-cran-purrr. 169s Preparing to unpack .../143-r-cran-purrr_1.0.4-1_amd64.deb ... 169s Unpacking r-cran-purrr (1.0.4-1) ... 169s Selecting previously unselected package r-cran-mass. 169s Preparing to unpack .../144-r-cran-mass_7.3-65-1_amd64.deb ... 169s Unpacking r-cran-mass (7.3-65-1) ... 169s Selecting previously unselected package r-cran-class. 169s Preparing to unpack .../145-r-cran-class_7.3-23-1_amd64.deb ... 169s Unpacking r-cran-class (7.3-23-1) ... 169s Selecting previously unselected package r-cran-proxy. 169s Preparing to unpack .../146-r-cran-proxy_0.4-27-1_amd64.deb ... 169s Unpacking r-cran-proxy (0.4-27-1) ... 169s Selecting previously unselected package r-cran-e1071. 169s Preparing to unpack .../147-r-cran-e1071_1.7-17-1_amd64.deb ... 169s Unpacking r-cran-e1071 (1.7-17-1) ... 169s Selecting previously unselected package r-cran-kernsmooth. 169s Preparing to unpack .../148-r-cran-kernsmooth_2.23-26-1build1_amd64.deb ... 169s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 169s Selecting previously unselected package r-cran-classint. 169s Preparing to unpack .../149-r-cran-classint_0.4-11+dfsg-1_amd64.deb ... 169s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 169s Selecting previously unselected package r-cran-dbi. 169s Preparing to unpack .../150-r-cran-dbi_1.2.3-1build1_all.deb ... 169s Unpacking r-cran-dbi (1.2.3-1build1) ... 169s Selecting previously unselected package r-cran-littler. 169s Preparing to unpack .../151-r-cran-littler_0.3.22-1_amd64.deb ... 169s Unpacking r-cran-littler (0.3.22-1) ... 169s Selecting previously unselected package r-cran-pkgkitten. 169s Preparing to unpack .../152-r-cran-pkgkitten_0.2.4-1_all.deb ... 169s Unpacking r-cran-pkgkitten (0.2.4-1) ... 169s Selecting previously unselected package r-cran-rcpp. 169s Preparing to unpack .../153-r-cran-rcpp_1.1.0-1_amd64.deb ... 169s Unpacking r-cran-rcpp (1.1.0-1) ... 169s Selecting previously unselected package r-cran-wk. 169s Preparing to unpack .../154-r-cran-wk_0.9.4-1_amd64.deb ... 169s Unpacking r-cran-wk (0.9.4-1) ... 169s Selecting previously unselected package r-cran-s2. 169s Preparing to unpack .../155-r-cran-s2_1.1.9-1build1_amd64.deb ... 169s Unpacking r-cran-s2 (1.1.9-1build1) ... 169s Selecting previously unselected package r-cran-units. 169s Preparing to unpack .../156-r-cran-units_0.8-7+dfsg-2_amd64.deb ... 169s Unpacking r-cran-units (0.8-7+dfsg-2) ... 169s Selecting previously unselected package r-cran-sf. 169s Preparing to unpack .../157-r-cran-sf_1.0-19+dfsg-2build2_amd64.deb ... 169s Unpacking r-cran-sf (1.0-19+dfsg-2build2) ... 169s Selecting previously unselected package r-cran-areal. 169s Preparing to unpack .../158-r-cran-areal_0.1.8+dfsg-2_all.deb ... 169s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 169s Selecting previously unselected package r-cran-sys. 169s Preparing to unpack .../159-r-cran-sys_3.4.3-1_amd64.deb ... 169s Unpacking r-cran-sys (3.4.3-1) ... 169s Selecting previously unselected package r-cran-askpass. 169s Preparing to unpack .../160-r-cran-askpass_1.2.1-1_amd64.deb ... 169s Unpacking r-cran-askpass (1.2.1-1) ... 169s Selecting previously unselected package r-cran-base64enc. 169s Preparing to unpack .../161-r-cran-base64enc_0.1-3-3build1_amd64.deb ... 169s Unpacking r-cran-base64enc (0.1-3-3build1) ... 169s Selecting previously unselected package r-cran-bdsmatrix. 169s Preparing to unpack .../162-r-cran-bdsmatrix_1.3-7-1_amd64.deb ... 169s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 169s Selecting previously unselected package r-cran-brio. 169s Preparing to unpack .../163-r-cran-brio_1.1.5-1_amd64.deb ... 169s Unpacking r-cran-brio (1.1.5-1) ... 169s Selecting previously unselected package r-cran-fastmap. 169s Preparing to unpack .../164-r-cran-fastmap_1.2.0-1_amd64.deb ... 169s Unpacking r-cran-fastmap (1.2.0-1) ... 169s Selecting previously unselected package r-cran-cachem. 169s Preparing to unpack .../165-r-cran-cachem_1.1.0-1_amd64.deb ... 169s Unpacking r-cran-cachem (1.1.0-1) ... 169s Selecting previously unselected package r-cran-digest. 169s Preparing to unpack .../166-r-cran-digest_0.6.39-1_amd64.deb ... 169s Unpacking r-cran-digest (0.6.39-1) ... 169s Selecting previously unselected package r-cran-htmltools. 169s Preparing to unpack .../167-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 169s Unpacking r-cran-htmltools (0.5.8.1-1) ... 169s Selecting previously unselected package r-cran-jquerylib. 169s Preparing to unpack .../168-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 169s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 169s Selecting previously unselected package r-cran-jsonlite. 169s Preparing to unpack .../169-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 169s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 169s Selecting previously unselected package r-cran-memoise. 169s Preparing to unpack .../170-r-cran-memoise_2.0.1-1build1_all.deb ... 169s Unpacking r-cran-memoise (2.0.1-1build1) ... 169s Selecting previously unselected package r-cran-mime. 169s Preparing to unpack .../171-r-cran-mime_0.12-2_amd64.deb ... 169s Unpacking r-cran-mime (0.12-2) ... 170s Selecting previously unselected package r-cran-fs. 170s Preparing to unpack .../172-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 170s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 170s Selecting previously unselected package r-cran-rappdirs. 170s Preparing to unpack .../173-r-cran-rappdirs_0.3.3-1build1_amd64.deb ... 170s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 170s Selecting previously unselected package r-cran-sass. 170s Preparing to unpack .../174-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 170s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 170s Selecting previously unselected package r-cran-bslib. 170s Preparing to unpack .../175-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 170s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 170s Selecting previously unselected package r-cran-cairo. 170s Preparing to unpack .../176-r-cran-cairo_1.6-2-1_amd64.deb ... 170s Unpacking r-cran-cairo (1.6-2-1) ... 170s Selecting previously unselected package r-cran-ps. 170s Preparing to unpack .../177-r-cran-ps_1.9.0-1_amd64.deb ... 170s Unpacking r-cran-ps (1.9.0-1) ... 170s Selecting previously unselected package r-cran-processx. 170s Preparing to unpack .../178-r-cran-processx_3.8.6-1_amd64.deb ... 170s Unpacking r-cran-processx (3.8.6-1) ... 170s Selecting previously unselected package r-cran-callr. 170s Preparing to unpack .../179-r-cran-callr_3.7.6-1_all.deb ... 170s Unpacking r-cran-callr (3.7.6-1) ... 170s Selecting previously unselected package r-cran-cftime. 170s Preparing to unpack .../180-r-cran-cftime_1.7.2-1_all.deb ... 170s Unpacking r-cran-cftime (1.7.2-1) ... 170s Selecting previously unselected package r-cran-cluster. 170s Preparing to unpack .../181-r-cran-cluster_2.1.8.2-1_amd64.deb ... 170s Unpacking r-cran-cluster (2.1.8.2-1) ... 170s Selecting previously unselected package r-cran-clue. 170s Preparing to unpack .../182-r-cran-clue_0.3-66-1_amd64.deb ... 170s Unpacking r-cran-clue (0.3-66-1) ... 170s Selecting previously unselected package r-cran-codetools. 170s Preparing to unpack .../183-r-cran-codetools_0.2-20-1build1_all.deb ... 170s Unpacking r-cran-codetools (0.2-20-1build1) ... 170s Selecting previously unselected package r-cran-collapse. 170s Preparing to unpack .../184-r-cran-collapse_2.1.0-1_amd64.deb ... 170s Unpacking r-cran-collapse (2.1.0-1) ... 170s Selecting previously unselected package r-cran-commonmark. 170s Preparing to unpack .../185-r-cran-commonmark_1.9.5-1_amd64.deb ... 170s Unpacking r-cran-commonmark (1.9.5-1) ... 170s Selecting previously unselected package r-cran-lazyeval. 170s Preparing to unpack .../186-r-cran-lazyeval_0.2.2-1build2_amd64.deb ... 170s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 170s Selecting previously unselected package r-cran-rex. 170s Preparing to unpack .../187-r-cran-rex_1.2.1-1build1_all.deb ... 170s Unpacking r-cran-rex (1.2.1-1build1) ... 170s Selecting previously unselected package r-cran-curl. 170s Preparing to unpack .../188-r-cran-curl_7.0.0+dfsg-1_amd64.deb ... 170s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 170s Selecting previously unselected package r-cran-openssl. 170s Preparing to unpack .../189-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 170s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 170s Selecting previously unselected package r-cran-httr. 170s Preparing to unpack .../190-r-cran-httr_1.4.7+dfsg-1_all.deb ... 170s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 170s Selecting previously unselected package r-cran-crayon. 170s Preparing to unpack .../191-r-cran-crayon_1.5.3-1_all.deb ... 170s Unpacking r-cran-crayon (1.5.3-1) ... 170s Selecting previously unselected package r-cran-yaml. 170s Preparing to unpack .../192-r-cran-yaml_2.3.10-1_amd64.deb ... 170s Unpacking r-cran-yaml (2.3.10-1) ... 170s Selecting previously unselected package r-cran-covr. 170s Preparing to unpack .../193-r-cran-covr_3.6.4+dfsg-1_amd64.deb ... 170s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 170s Selecting previously unselected package r-cran-cpp11. 170s Preparing to unpack .../194-r-cran-cpp11_0.5.3-1_all.deb ... 170s Unpacking r-cran-cpp11 (0.5.3-1) ... 170s Selecting previously unselected package r-cran-cubelyr. 170s Preparing to unpack .../195-r-cran-cubelyr_1.0.2-1_all.deb ... 170s Unpacking r-cran-cubelyr (1.0.2-1) ... 170s Selecting previously unselected package r-cran-deldir. 170s Preparing to unpack .../196-r-cran-deldir_2.0-4-1build1_amd64.deb ... 170s Unpacking r-cran-deldir (2.0-4-1build1) ... 170s Selecting previously unselected package r-cran-desc. 170s Preparing to unpack .../197-r-cran-desc_1.4.3-1_all.deb ... 170s Unpacking r-cran-desc (1.4.3-1) ... 170s Selecting previously unselected package r-cran-diffobj. 170s Preparing to unpack .../198-r-cran-diffobj_0.3.5-1build1_amd64.deb ... 170s Unpacking r-cran-diffobj (0.3.5-1build1) ... 170s Selecting previously unselected package r-cran-evaluate. 170s Preparing to unpack .../199-r-cran-evaluate_1.0.5-1_all.deb ... 170s Unpacking r-cran-evaluate (1.0.5-1) ... 170s Selecting previously unselected package r-cran-lattice. 170s Preparing to unpack .../200-r-cran-lattice_0.22-7-1_amd64.deb ... 170s Unpacking r-cran-lattice (0.22-7-1) ... 170s Selecting previously unselected package r-cran-sp. 170s Preparing to unpack .../201-r-cran-sp_1%3a2.2-0+dfsg-1_amd64.deb ... 170s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 170s Selecting previously unselected package r-cran-terra. 170s Preparing to unpack .../202-r-cran-terra_1.8-70-1build2_amd64.deb ... 170s Unpacking r-cran-terra (1.8-70-1build2) ... 170s Selecting previously unselected package r-cran-raster. 170s Preparing to unpack .../203-r-cran-raster_3.6-31-2_amd64.deb ... 170s Unpacking r-cran-raster (3.6-31-2) ... 170s Selecting previously unselected package r-cran-exactextractr. 170s Preparing to unpack .../204-r-cran-exactextractr_0.10.0-1build2_amd64.deb ... 170s Unpacking r-cran-exactextractr (0.10.0-1build2) ... 170s Selecting previously unselected package r-cran-farver. 170s Preparing to unpack .../205-r-cran-farver_2.1.2-1_amd64.deb ... 170s Unpacking r-cran-farver (2.1.2-1) ... 170s Selecting previously unselected package r-cran-fnn. 170s Preparing to unpack .../206-r-cran-fnn_1.1.4.1-1_amd64.deb ... 170s Unpacking r-cran-fnn (1.1.4.1-1) ... 170s Selecting previously unselected package r-cran-fontawesome. 170s Preparing to unpack .../207-r-cran-fontawesome_0.5.3-1_all.deb ... 170s Unpacking r-cran-fontawesome (0.5.3-1) ... 170s Selecting previously unselected package r-cran-formula. 170s Preparing to unpack .../208-r-cran-formula_1.2-5-1_all.deb ... 170s Unpacking r-cran-formula (1.2-5-1) ... 170s Selecting previously unselected package r-cran-globals. 170s Preparing to unpack .../209-r-cran-globals_0.19.0-1_all.deb ... 170s Unpacking r-cran-globals (0.19.0-1) ... 170s Selecting previously unselected package r-cran-listenv. 170s Preparing to unpack .../210-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 170s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 170s Selecting previously unselected package r-cran-parallelly. 170s Preparing to unpack .../211-r-cran-parallelly_1.42.0-1_amd64.deb ... 170s Unpacking r-cran-parallelly (1.42.0-1) ... 170s Selecting previously unselected package r-cran-future. 170s Preparing to unpack .../212-r-cran-future_1.34.0+dfsg-1_all.deb ... 170s Unpacking r-cran-future (1.34.0+dfsg-1) ... 170s Selecting previously unselected package r-cran-future.apply. 170s Preparing to unpack .../213-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 170s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 170s Selecting previously unselected package r-cran-gtable. 170s Preparing to unpack .../214-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 170s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 170s Selecting previously unselected package r-cran-isoband. 170s Preparing to unpack .../215-r-cran-isoband_0.2.7-1_amd64.deb ... 170s Unpacking r-cran-isoband (0.2.7-1) ... 170s Selecting previously unselected package r-cran-s7. 170s Preparing to unpack .../216-r-cran-s7_0.2.0-1_amd64.deb ... 170s Unpacking r-cran-s7 (0.2.0-1) ... 170s Selecting previously unselected package r-cran-labeling. 170s Preparing to unpack .../217-r-cran-labeling_0.4.3-1_all.deb ... 170s Unpacking r-cran-labeling (0.4.3-1) ... 170s Selecting previously unselected package r-cran-rcolorbrewer. 170s Preparing to unpack .../218-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 170s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 170s Selecting previously unselected package r-cran-viridislite. 171s Preparing to unpack .../219-r-cran-viridislite_0.4.3-1_all.deb ... 171s Unpacking r-cran-viridislite (0.4.3-1) ... 171s Selecting previously unselected package r-cran-scales. 171s Preparing to unpack .../220-r-cran-scales_1.4.0-1_all.deb ... 171s Unpacking r-cran-scales (1.4.0-1) ... 171s Selecting previously unselected package r-cran-ggplot2. 171s Preparing to unpack .../221-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 171s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 171s Selecting previously unselected package r-cran-tweenr. 171s Preparing to unpack .../222-r-cran-tweenr_2.0.3-1_amd64.deb ... 171s Unpacking r-cran-tweenr (2.0.3-1) ... 171s Selecting previously unselected package r-cran-polyclip. 171s Preparing to unpack .../223-r-cran-polyclip_1.10-7-1_amd64.deb ... 171s Unpacking r-cran-polyclip (1.10-7-1) ... 171s Selecting previously unselected package r-cran-systemfonts. 171s Preparing to unpack .../224-r-cran-systemfonts_1.2.1-1_amd64.deb ... 171s Unpacking r-cran-systemfonts (1.2.1-1) ... 171s Selecting previously unselected package r-cran-matrix. 171s Preparing to unpack .../225-r-cran-matrix_1.7-4-1_amd64.deb ... 171s Unpacking r-cran-matrix (1.7-4-1) ... 171s Selecting previously unselected package r-cran-rcppeigen. 171s Preparing to unpack .../226-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 171s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 171s Selecting previously unselected package r-cran-ggforce. 171s Preparing to unpack .../227-r-cran-ggforce_0.4.2-1_amd64.deb ... 171s Unpacking r-cran-ggforce (0.4.2-1) ... 171s Selecting previously unselected package r-cran-stringi. 171s Preparing to unpack .../228-r-cran-stringi_1.8.4-1build2_amd64.deb ... 171s Unpacking r-cran-stringi (1.8.4-1build2) ... 171s Selecting previously unselected package r-cran-stringr. 171s Preparing to unpack .../229-r-cran-stringr_1.5.1-1_all.deb ... 171s Unpacking r-cran-stringr (1.5.1-1) ... 171s Selecting previously unselected package r-cran-ggthemes. 171s Preparing to unpack .../230-r-cran-ggthemes_5.2.0-1_all.deb ... 171s Unpacking r-cran-ggthemes (5.2.0-1) ... 171s Selecting previously unselected package r-cran-goftest. 171s Preparing to unpack .../231-r-cran-goftest_1.2-3-1build1_amd64.deb ... 171s Unpacking r-cran-goftest (1.2-3-1build1) ... 171s Selecting previously unselected package r-cran-gridextra. 171s Preparing to unpack .../232-r-cran-gridextra_2.3-3build2_all.deb ... 171s Unpacking r-cran-gridextra (2.3-3build2) ... 171s Selecting previously unselected package r-cran-zoo. 171s Preparing to unpack .../233-r-cran-zoo_1.8-15-1_amd64.deb ... 171s Unpacking r-cran-zoo (1.8-15-1) ... 171s Selecting previously unselected package r-cran-sftime. 171s Preparing to unpack .../234-r-cran-sftime_0.2-0-6_all.deb ... 171s Unpacking r-cran-sftime (0.2-0-6) ... 171s Selecting previously unselected package r-cran-xts. 171s Preparing to unpack .../235-r-cran-xts_0.14.1-1_amd64.deb ... 171s Unpacking r-cran-xts (0.14.1-1) ... 171s Selecting previously unselected package r-cran-intervals. 171s Preparing to unpack .../236-r-cran-intervals_0.15.5-1_amd64.deb ... 171s Unpacking r-cran-intervals (0.15.5-1) ... 171s Selecting previously unselected package r-cran-spacetime. 171s Preparing to unpack .../237-r-cran-spacetime_1.3-3-2_all.deb ... 171s Unpacking r-cran-spacetime (1.3-3-2) ... 171s Selecting previously unselected package r-cran-stars. 171s Preparing to unpack .../238-r-cran-stars_0.7-0-1_all.deb ... 171s Unpacking r-cran-stars (0.7-0-1) ... 171s Selecting previously unselected package r-cran-gstat. 171s Preparing to unpack .../239-r-cran-gstat_2.1-3-2_amd64.deb ... 171s Unpacking r-cran-gstat (2.1-3-2) ... 171s Selecting previously unselected package r-cran-xfun. 171s Preparing to unpack .../240-r-cran-xfun_0.55+dfsg-1_amd64.deb ... 171s Unpacking r-cran-xfun (0.55+dfsg-1) ... 171s Selecting previously unselected package r-cran-highr. 171s Preparing to unpack .../241-r-cran-highr_0.11+dfsg-1_all.deb ... 171s Unpacking r-cran-highr (0.11+dfsg-1) ... 171s Selecting previously unselected package r-cran-later. 171s Preparing to unpack .../242-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 171s Unpacking r-cran-later (1.4.1+dfsg-1) ... 171s Selecting previously unselected package r-cran-promises. 171s Preparing to unpack .../243-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 171s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 171s Selecting previously unselected package r-cran-httpuv. 171s Preparing to unpack .../244-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 171s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 171s Selecting previously unselected package libjs-mathjax. 171s Preparing to unpack .../245-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 171s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 171s Selecting previously unselected package r-cran-knitr. 171s Preparing to unpack .../246-r-cran-knitr_1.51+dfsg-1_all.deb ... 171s Unpacking r-cran-knitr (1.51+dfsg-1) ... 171s Selecting previously unselected package r-cran-lmtest. 171s Preparing to unpack .../247-r-cran-lmtest_0.9.40-1build1_amd64.deb ... 171s Unpacking r-cran-lmtest (0.9.40-1build1) ... 171s Selecting previously unselected package r-cran-lwgeom. 171s Preparing to unpack .../248-r-cran-lwgeom_0.2-14-1_amd64.deb ... 171s Unpacking r-cran-lwgeom (0.2-14-1) ... 171s Selecting previously unselected package r-cran-maps. 171s Preparing to unpack .../249-r-cran-maps_3.4.2.1-1_amd64.deb ... 171s Unpacking r-cran-maps (3.4.2.1-1) ... 171s Selecting previously unselected package r-cran-mapdata. 171s Preparing to unpack .../250-r-cran-mapdata_2.3.1-1_amd64.deb ... 171s Unpacking r-cran-mapdata (2.3.1-1) ... 172s Selecting previously unselected package r-cran-misctools. 172s Preparing to unpack .../251-r-cran-misctools_0.6-28-1_all.deb ... 172s Unpacking r-cran-misctools (0.6-28-1) ... 172s Selecting previously unselected package r-cran-sandwich. 172s Preparing to unpack .../252-r-cran-sandwich_3.1-1-1build1_all.deb ... 172s Unpacking r-cran-sandwich (3.1-1-1build1) ... 172s Selecting previously unselected package r-cran-maxlik. 172s Preparing to unpack .../253-r-cran-maxlik_1.5-2.2-1_all.deb ... 172s Unpacking r-cran-maxlik (1.5-2.2-1) ... 172s Selecting previously unselected package r-cran-nlme. 172s Preparing to unpack .../254-r-cran-nlme_3.1.168-1_amd64.deb ... 172s Unpacking r-cran-nlme (3.1.168-1) ... 172s Selecting previously unselected package r-cran-mgcv. 172s Preparing to unpack .../255-r-cran-mgcv_1.9-4-1_amd64.deb ... 172s Unpacking r-cran-mgcv (1.9-4-1) ... 172s Selecting previously unselected package r-cran-rnetcdf. 172s Preparing to unpack .../256-r-cran-rnetcdf_2.9-2-1_amd64.deb ... 172s Unpacking r-cran-rnetcdf (2.9-2-1) ... 172s Selecting previously unselected package r-cran-tidyr. 172s Preparing to unpack .../257-r-cran-tidyr_1.3.1-1_amd64.deb ... 172s Unpacking r-cran-tidyr (1.3.1-1) ... 172s Selecting previously unselected package r-cran-ncmeta. 172s Preparing to unpack .../258-r-cran-ncmeta_0.4.0-1_all.deb ... 172s Unpacking r-cran-ncmeta (0.4.0-1) ... 172s Selecting previously unselected package r-cran-ncdfgeom. 172s Preparing to unpack .../259-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 172s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 172s Selecting previously unselected package r-cran-pbapply. 172s Preparing to unpack .../260-r-cran-pbapply_1.7-2-1_all.deb ... 172s Unpacking r-cran-pbapply (1.7-2-1) ... 172s Selecting previously unselected package r-cran-pcict. 172s Preparing to unpack .../261-r-cran-pcict_0.5-4.4-1_amd64.deb ... 172s Unpacking r-cran-pcict (0.5-4.4-1) ... 172s Selecting previously unselected package r-cran-pkgbuild. 172s Preparing to unpack .../262-r-cran-pkgbuild_1.4.8-1_all.deb ... 172s Unpacking r-cran-pkgbuild (1.4.8-1) ... 172s Selecting previously unselected package r-cran-rprojroot. 172s Preparing to unpack .../263-r-cran-rprojroot_2.1.1-1_all.deb ... 172s Unpacking r-cran-rprojroot (2.1.1-1) ... 172s Selecting previously unselected package r-cran-pkgload. 172s Preparing to unpack .../264-r-cran-pkgload_1.4.1-1_all.deb ... 172s Unpacking r-cran-pkgload (1.4.1-1) ... 172s Selecting previously unselected package r-cran-rbibutils. 172s Preparing to unpack .../265-r-cran-rbibutils_2.3-1_amd64.deb ... 172s Unpacking r-cran-rbibutils (2.3-1) ... 172s Selecting previously unselected package r-cran-rdpack. 172s Preparing to unpack .../266-r-cran-rdpack_2.6.3-1_all.deb ... 172s Unpacking r-cran-rdpack (2.6.3-1) ... 172s Selecting previously unselected package r-cran-plm. 172s Preparing to unpack .../267-r-cran-plm_2.6-7-1_all.deb ... 172s Unpacking r-cran-plm (2.6-7-1) ... 172s Selecting previously unselected package r-cran-praise. 172s Preparing to unpack .../268-r-cran-praise_1.0.0-4build2_all.deb ... 172s Unpacking r-cran-praise (1.0.0-4build2) ... 172s Selecting previously unselected package r-cran-randomforest. 172s Preparing to unpack .../269-r-cran-randomforest_4.7-1.2-1_amd64.deb ... 172s Unpacking r-cran-randomforest (4.7-1.2-1) ... 172s Selecting previously unselected package r-cran-tinytex. 172s Preparing to unpack .../270-r-cran-tinytex_0.58-1_all.deb ... 172s Unpacking r-cran-tinytex (0.58-1) ... 172s Selecting previously unselected package libjs-modernizr. 172s Preparing to unpack .../271-libjs-modernizr_3.13.0-0.1build1_all.deb ... 172s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 172s Selecting previously unselected package r-cran-xtable. 172s Preparing to unpack .../272-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 172s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 172s Selecting previously unselected package r-cran-sourcetools. 172s Preparing to unpack .../273-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 172s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 172s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 172s Preparing to unpack .../274-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 172s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 172s Selecting previously unselected package r-cran-shiny. 172s Preparing to unpack .../275-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 172s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 172s Selecting previously unselected package r-cran-rmarkdown. 172s Preparing to unpack .../276-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 172s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 172s Selecting previously unselected package r-cran-survival. 172s Preparing to unpack .../277-r-cran-survival_3.8-6-1_amd64.deb ... 172s Unpacking r-cran-survival (3.8-6-1) ... 172s Selecting previously unselected package r-cran-rpart. 172s Preparing to unpack .../278-r-cran-rpart_4.1.24-1build1_amd64.deb ... 172s Unpacking r-cran-rpart (4.1.24-1build1) ... 172s Selecting previously unselected package r-cran-spatstat.utils. 172s Preparing to unpack .../279-r-cran-spatstat.utils_3.1-3-1_amd64.deb ... 172s Unpacking r-cran-spatstat.utils (3.1-3-1) ... 172s Selecting previously unselected package r-cran-spatstat.data. 172s Preparing to unpack .../280-r-cran-spatstat.data_3.1-6-1_all.deb ... 172s Unpacking r-cran-spatstat.data (3.1-6-1) ... 172s Selecting previously unselected package r-cran-spatstat.univar. 172s Preparing to unpack .../281-r-cran-spatstat.univar_3.1-2-1_amd64.deb ... 172s Unpacking r-cran-spatstat.univar (3.1-2-1) ... 172s Selecting previously unselected package r-cran-spatstat.geom. 172s Preparing to unpack .../282-r-cran-spatstat.geom_3.3-6-1_amd64.deb ... 172s Unpacking r-cran-spatstat.geom (3.3-6-1) ... 172s Selecting previously unselected package r-cran-spatstat.random. 172s Preparing to unpack .../283-r-cran-spatstat.random_3.3-3-1_amd64.deb ... 172s Unpacking r-cran-spatstat.random (3.3-3-1) ... 172s Selecting previously unselected package r-cran-tensor. 172s Preparing to unpack .../284-r-cran-tensor_1.5-4build1_all.deb ... 172s Unpacking r-cran-tensor (1.5-4build1) ... 172s Selecting previously unselected package 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(2025-10-31) -- "[Not] Part in a Rumble" 177s Copyright (C) 2025 The R Foundation for Statistical Computing 177s Platform: x86_64-pc-linux-gnu 177s 177s R is free software and comes with ABSOLUTELY NO WARRANTY. 177s You are welcome to redistribute it under certain conditions. 177s Type 'license()' or 'licence()' for distribution details. 177s 177s R is a collaborative project with many contributors. 177s Type 'contributors()' for more information and 177s 'citation()' on how to cite R or R packages in publications. 177s 177s Type 'demo()' for some demos, 'help()' for on-line help, or 177s 'help.start()' for an HTML browser interface to help. 177s Type 'q()' to quit R. 177s 177s > ## IGNORE_RDIFF_BEGIN 177s > library(stars) 177s Loading required package: abind 177s Loading required package: sf 177s Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.0; sf_use_s2() is TRUE 177s > ## IGNORE_RDIFF_END 177s > 177s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 177s + data(air) # this loads several datasets in .GlobalEnv 177s + dim(air) 177s + d = st_dimensions(station = st_set_crs(st_as_sfc(stations), 4326), time = dates) 177s + 177s + blocks = st_make_grid(st_as_sfc("POLYGON ((5.871619 47.26986, 15.03811 47.26986, 15.03811 55.05653, 5.871619 55.05653, 5.871619 47.26986))", crs = 4326), 177s + n = c(3,3)) 177s + 177s + print(aq <- st_as_stars(list(PM10 = air), dimensions = d)) 177s + print(a <- aggregate(aq, blocks, mean, na.rm = TRUE)) 177s + } 178s stars object with 2 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 178s PM10 0 9.921 14.792 17.69728 21.992 274.333 157659 178s dimension(s): 178s from to offset delta refsys point 178s station 1 70 NA NA WGS 84 TRUE 178s time 1 4383 1998-01-01 1 days Date FALSE 178s values 178s station POINT (9.585911 53.67057),...,POINT (9.446661 49.24068) 178s time NULL 178s stars object with 2 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 178s PM10 1 11 15.57425 18.1715 22.17197 183.271 8429 178s dimension(s): 178s from to offset delta refsys point 178s geometry 1 9 NA NA WGS 84 FALSE 178s time 1 4383 1998-01-01 1 days Date FALSE 178s values 178s geometry POLYGON ((5.871619 47.269...,...,POLYGON ((11.98261 52.460... 178s time NULL 178s > 178s > # adapted from ?read_stars: 178s > m = array(1:720, dim = c(x = 10, y = 12, t = 6)) # named dim 178s > st = st_as_stars(m) 178s > attr(st, "dimensions")$y$delta = -1 178s > attr(st, "dimensions")$y$offset = 12 178s > tm = as.Date("2019-02-19") + 1:6 178s > st = st_set_crs(st_set_dimensions(st, 3, values = tm), 4326) 178s > 178s > tmp = tempfile(fileext = ".tif") 178s > write_stars(st, tmp) 178s > 178s > (red <- setNames(read_stars(tmp, RasterIO = list(nXOff = 1, nYOff = 1, nXsize = 10, nYSize = 12, 178s + nBufXSize = 2, nBufYSize = 2)), "foo")) 178s stars object with 3 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. 178s foo 33 199.25 365.5 365.5 531.75 698 178s dimension(s): 178s from to offset delta refsys point x/y 178s x 1 2 0 5 WGS 84 FALSE [x] 178s y 1 2 12 -6 WGS 84 FALSE [y] 178s band 1 6 NA NA NA NA 178s > 178s > sfc = st_set_crs(st_as_sfc(red, as_points = FALSE), st_crs(st)) 178s > (a = aggregate(st, st_sf(a = 1, geom = sfc), mean)) 178s stars object with 2 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. 178s A1 28 194.25 360.5 360.5 526.75 693 178s dimension(s): 178s from to offset delta refsys point 178s geom 1 4 NA NA WGS 84 FALSE 178s t 1 6 2019-02-20 1 days Date FALSE 178s values 178s geom POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 178s t NULL 178s > (a = aggregate(st, sfc, mean)) 178s stars object with 2 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. 178s A1 28 194.25 360.5 360.5 526.75 693 178s dimension(s): 178s from to offset delta refsys point 178s geometry 1 4 NA NA WGS 84 FALSE 178s t 1 6 2019-02-20 1 days Date FALSE 178s values 178s geometry POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 178s t NULL 178s > 178s > tm0 = as.Date("2019-02-19") + -1:8 178s > (a = aggregate(st, tm0, mean, na.rm = TRUE)) 178s stars object with 3 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 178s A1 1 180.75 360.5 360.5 540.25 720 480 178s dimension(s): 178s from to offset delta refsys point x/y 178s time 1 10 2019-02-18 1 days Date NA 178s x 1 10 0 1 WGS 84 FALSE [x] 178s y 1 12 12 -1 WGS 84 FALSE [y] 178s > (a = aggregate(st, "days", mean, na.rm = TRUE)) 178s stars object with 3 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. 178s A1 1 180.75 360.5 360.5 540.25 720 178s dimension(s): 178s from to offset delta refsys point x/y 178s time 1 6 2019-02-20 1 days Date NA 178s x 1 10 0 1 WGS 84 FALSE [x] 178s y 1 12 12 -1 WGS 84 FALSE [y] 178s > yd = function(x) as.POSIXlt(x)$yday 178s > (a = aggregate(st, yd, mean, na.rm = TRUE)) 178s stars object with 3 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. 178s A1 1 180.75 360.5 360.5 540.25 720 178s dimension(s): 178s from to offset delta refsys point values x/y 178s geometry 1 6 NA NA NA NA 50,...,55 178s x 1 10 0 1 WGS 84 FALSE NULL [x] 178s y 1 12 12 -1 WGS 84 FALSE NULL [y] 178s > 178s > # with "by" geometry not overlapping x 178s > pt = st_point(c(-10,-10)) 178s > (sfc = c(sfc, st_sfc(pt, crs = st_crs(sfc)))) 178s Geometry set for 5 features 178s Geometry type: GEOMETRY 178s Dimension: XY 178s Bounding box: xmin: -10 ymin: -10 xmax: 10 ymax: 12 178s Geodetic CRS: WGS 84 178s POLYGON ((0 12, 5 12, 5 6, 0 6, 0 12)) 178s POLYGON ((5 12, 10 12, 10 6, 5 6, 5 12)) 178s POLYGON ((0 6, 5 6, 5 0, 0 0, 0 6)) 178s POLYGON ((5 6, 10 6, 10 0, 5 0, 5 6)) 178s POINT (-10 -10) 178s > (a = aggregate(st, sfc, mean)) 178s stars object with 2 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 178s A1 28 194.25 360.5 360.5 526.75 693 6 178s dimension(s): 178s from to offset delta refsys point 178s geometry 1 5 NA NA WGS 84 FALSE 178s t 1 6 2019-02-20 1 days Date FALSE 178s values 178s geometry POLYGON ((0 12, 5 12, 5 6...,...,POINT (-10 -10) 178s t NULL 178s > (a = aggregate(st, st, mean)) 178s stars object with 2 dimensions and 1 attribute 178s attribute(s): 178s Min. 1st Qu. Median Mean 3rd Qu. Max. 178s A1 1 180.75 360.5 360.5 540.25 720 178s dimension(s): 178s from to offset delta refsys point 178s geometry 1 120 NA NA WGS 84 FALSE 178s t 1 6 2019-02-20 1 days Date FALSE 178s values 178s geometry POLYGON ((0 12, 1 12, 1 1...,...,POLYGON ((9 1, 10 1, 10 0... 178s t NULL 178s > 178s BEGIN TEST align.R 178s 178s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 178s Copyright (C) 2025 The R Foundation for Statistical Computing 178s Platform: x86_64-pc-linux-gnu 178s 178s R is free software and comes with ABSOLUTELY NO WARRANTY. 178s You are welcome to redistribute it under certain conditions. 178s Type 'license()' or 'licence()' for distribution details. 178s 178s R is a collaborative project with many contributors. 178s Type 'contributors()' for more information and 178s 'citation()' on how to cite R or R packages in publications. 178s 178s Type 'demo()' for some demos, 'help()' for on-line help, or 178s 'help.start()' for an HTML browser interface to help. 178s Type 'q()' to quit R. 178s 178s > suppressPackageStartupMessages(library(stars)) 178s > set.seed(1331) 178s > st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1) 179s Geometry set for 1 feature 179s Geometry type: POINT 179s Dimension: XY 179s Bounding box: xmin: 291430.8 ymin: 9111430 xmax: 291430.8 ymax: 9111430 179s Projected CRS: SIRGAS 2000 / UTM zone 25S 179s POINT (291430.8 9111430) 179s > b = st_buffer(st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1), 335) 179s > bba = stars:::st_align(st_bbox(b), st_dimensions(L7_ETMs)) 179s > 179s > plot(L7_ETMs[,,,1], extent = st_buffer(b, 20), reset = FALSE, key.pos = NULL) 179s > plot(b, add = TRUE, col = NA, border = 'red') 179s > plot(st_as_sfc(st_bbox(b)), col = NA, border = 'red', add = TRUE) 179s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 179s > st_bbox(b) 179s xmin ymin xmax ymax 179s 297116.8 9119404.1 297786.8 9120074.1 179s > bba 179s xmin ymin xmax ymax 179s 297098.3 9119392.8 297810.8 9120076.8 179s > 179s > plot(L7_ETMs[,,,1], reset = FALSE, key.pos = NULL) 179s > plot(b, col = 'red', add = TRUE) 179s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 179s > 179s > b0 = st_buffer(b, -100) 179s > L7 = st_as_stars(L7_ETMs)[b0][,,,1] |> st_normalize() 179s > bbb = stars:::st_align(st_bbox(b), st_dimensions(L7)) 179s > plot(L7, extent = st_buffer(b, 120), reset = FALSE, key.pos = NULL) 179s > plot(st_as_sfc(st_bbox(L7)), col = NA, border = 'black', add = TRUE) 179s > plot(st_as_sfc(bbb), col = NA, border = 'blue', add = TRUE) 179s > plot(b, col = NA, border = 'red', add = TRUE) 179s > 179s > all.equal(bbb, bba) 179s [1] TRUE 179s > 179s BEGIN TEST area.R 179s 179s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 179s Copyright (C) 2025 The R Foundation for Statistical Computing 179s Platform: x86_64-pc-linux-gnu 179s 179s R is free software and comes with ABSOLUTELY NO WARRANTY. 179s You are welcome to redistribute it under certain conditions. 179s Type 'license()' or 'licence()' for distribution details. 179s 179s R is a collaborative project with many contributors. 179s Type 'contributors()' for more information and 179s 'citation()' on how to cite R or R packages in publications. 179s 179s Type 'demo()' for some demos, 'help()' for on-line help, or 179s 'help.start()' for an HTML browser interface to help. 179s Type 'q()' to quit R. 179s 179s > suppressPackageStartupMessages(library(stars)) 179s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 179s > x = read_stars(tif) 179s > (a = st_area(x[,1:5,1:5])) 179s stars object with 2 dimensions and 1 attribute 179s attribute(s): 179s Min. 1st Qu. Median Mean 3rd Qu. Max. 179s area [m^2] 812.25 812.25 812.25 812.25 812.25 812.25 179s dimension(s): 179s from to offset delta refsys point x/y 179s x 1 5 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 179s y 1 5 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 179s > 179s > m = matrix(1:20, nrow = 5, ncol = 4) 179s > x = c(0, 0.5, 1, 2, 4, 5) # 6 numbers: boundaries! 179s > y = c(0.3, 0.5, 1, 2, 2.2) # 5 numbers: boundaries! 179s > (r = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 179s stars object with 2 dimensions and 1 attribute 179s attribute(s): 179s Min. 1st Qu. Median Mean 3rd Qu. Max. 179s m 1 5.75 10.5 10.5 15.25 20 179s dimension(s): 179s from to point values x/y 179s x 1 5 FALSE [0,0.5),...,[4,5) [x] 179s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 179s > # image(r, axes = TRUE, col = grey((1:20)/20)) 179s > (a = st_area(r)) 179s Missing coordinate reference system: assuming Cartesian coordinates 179s stars object with 2 dimensions and 1 attribute 179s attribute(s): 179s Min. 1st Qu. Median Mean 3rd Qu. Max. 179s area 0.1 0.2 0.325 0.475 0.5 2 179s dimension(s): 179s from to point values x/y 179s x 1 5 FALSE [0,0.5),...,[4,5) [x] 179s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 179s > #plot(a, axes = TRUE) 179s > 179s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 179s > if (s5p != "") { 179s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 179s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 179s + if (inherits(nit.c[[1]], "units")) 179s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 179s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 179s + st_crs(nit.c) = 4326 179s + print((a <- st_area(nit.c[,1:5,1:5]))) 179s + # plot(a, axes = TRUE, border = NA) 179s + } 179s > 179s BEGIN TEST crop.R 179s 179s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 179s Copyright (C) 2025 The R Foundation for Statistical Computing 179s Platform: x86_64-pc-linux-gnu 179s 179s R is free software and comes with ABSOLUTELY NO WARRANTY. 179s You are welcome to redistribute it under certain conditions. 179s Type 'license()' or 'licence()' for distribution details. 179s 179s R is a collaborative project with many contributors. 179s Type 'contributors()' for more information and 179s 'citation()' on how to cite R or R packages in publications. 179s 179s Type 'demo()' for some demos, 'help()' for on-line help, or 179s 'help.start()' for an HTML browser interface to help. 179s Type 'q()' to quit R. 179s 179s > suppressPackageStartupMessages(library(stars)) 180s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 180s > x = read_stars(tif) 180s > xy = structure(list(x = c(293253.999046018, 296400.196497684), y = c(9113801.64775462, 180s + 9111328.49619133)), .Names = c("x", "y")) 180s > pts = st_as_sf(data.frame(do.call(cbind, xy)), coords = c("x", "y"), crs = st_crs(x)) 180s > image(x, axes = TRUE) 180s > plot(st_as_sfc(st_bbox(pts)), col = NA, add = TRUE) 180s > 180s > bb = st_bbox(pts) 180s > (xx = x[bb]) 180s stars object with 3 dimensions and 1 attribute 180s attribute(s): 180s Min. 1st Qu. Median Mean 3rd Qu. Max. 180s L7_ETMs.tif 3 56 73 70.87303 89 255 180s dimension(s): 180s from to offset delta refsys point x/y 180s x 158 268 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 180s y 245 331 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 180s band 1 6 NA NA NA NA 180s > image(xx) 180s > plot(st_as_sfc(bb), add = TRUE, col = NA) 180s > st_contains(st_as_sfc(st_bbox(xx)), st_as_sfc(st_bbox(pts))) 180s Sparse geometry binary predicate list of length 1, where the predicate 180s was `contains' 180s 1: 1 180s > 180s > image(x) 180s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 180s > buf = st_buffer(st_sfc(pt, crs = st_crs(x)), 1500) 180s > plot(buf, add = TRUE) 180s > 180s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 180s + crs = st_crs(x)) 180s > image(x[buf]) 180s > plot(buf, add = TRUE, col = NA) 180s > image(x[buf,crop=FALSE]) 180s > plot(buf, add = TRUE, col = NA) 180s > 180s > plot(x, rgb = 1:3) 180s > 180s > # #638: 180s > l = st_as_stars(L7_ETMs) 180s > st_bbox(l) |> st_as_sfc() -> bb 180s > (bb + 1e6) |> st_set_crs(st_crs(l)) -> b 180s > st_crop(l, b) 181s stars object with 3 dimensions and 1 attribute 181s attribute(s): 181s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 181s L7_ETMs NA NA NA NaN NA NA 737088 181s dimension(s): 181s from to offset delta refsys point x/y 181s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 181s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 181s band 1 6 NA NA NA NA 181s Warning message: 181s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 181s > st_intersects(b, st_as_sfc(st_bbox(l))) |> as.matrix() 181s [,1] 181s [1,] FALSE 181s > (bb - 1e6) |> st_set_crs(st_crs(l)) -> b 181s > st_crop(l, b) 181s stars object with 3 dimensions and 1 attribute 181s attribute(s): 181s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 181s L7_ETMs NA NA NA NaN NA NA 737088 181s dimension(s): 181s Warning message: 181s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 181s from to offset delta refsys point x/y 181s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 181s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 181s band 1 6 NA NA NA NA 181s > 181s BEGIN TEST curvilinear.R 181s 181s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 181s Copyright (C) 2025 The R Foundation for Statistical Computing 181s Platform: x86_64-pc-linux-gnu 181s 181s R is free software and comes with ABSOLUTELY NO WARRANTY. 181s You are welcome to redistribute it under certain conditions. 181s Type 'license()' or 'licence()' for distribution details. 181s 181s R is a collaborative project with many contributors. 181s Type 'contributors()' for more information and 181s 'citation()' on how to cite R or R packages in publications. 181s 181s Type 'demo()' for some demos, 'help()' for on-line help, or 181s 'help.start()' for an HTML browser interface to help. 181s Type 'q()' to quit R. 181s 181s > suppressPackageStartupMessages(library(stars)) 181s > 181s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 181s > if (s5p != "") { 181s + 181s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 181s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 181s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 181s + lat = read_stars(lat_ds) 181s + lon = read_stars(lon_ds) 181s + nit = read_stars(nit_ds) 181s + nit[[1]][nit[[1]] > 9e+36] = NA 181s + 181s + ll = setNames(c(lon, lat), c("x", "y")) 181s + nit.c0 = st_as_stars(nit, curvilinear = ll) 181s + 181s + # more direct method: 181s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 181s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 181s + if (inherits(nit.c[[1]], "units")) 181s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 181s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 182s + all.equal(nit.c0, nit.c) 182s + st_crs(nit.c) = 4326 182s + print(nit.c) 182s + 182s + if (FALSE && capabilities()["png"]) { 182s + png("nit1.png", 800, 800) 182s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 182s + maps::map('world', add = TRUE, col = 'red') 182s + dev.off() 182s + 182s + png("nit2.png", 800, 800) 182s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 182s + maps::map('world', add = TRUE, col = 'red') 182s + dev.off() 182s + 182s + nit.c = stars:::st_downsample(nit.c, 8) 182s + print(nit.c) 182s + 182s + png("nit3.png", 800, 800) 182s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 182s + maps::map('world', add = TRUE, col = 'red') 182s + dev.off() 182s + 182s + png("nit4.png", 800, 800) 182s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 182s + maps::map('world', add = TRUE, col = 'red') 182s + dev.off() 182s + } 182s + 182s + } 182s > 182s BEGIN TEST datasets.R 182s 182s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 182s Copyright (C) 2025 The R Foundation for Statistical Computing 182s Platform: x86_64-pc-linux-gnu 182s 182s R is free software and comes with ABSOLUTELY NO WARRANTY. 182s You are welcome to redistribute it under certain conditions. 182s Type 'license()' or 'licence()' for distribution details. 182s 182s R is a collaborative project with many contributors. 182s Type 'contributors()' for more information and 182s 'citation()' on how to cite R or R packages in publications. 182s 182s Type 'demo()' for some demos, 'help()' for on-line help, or 182s 'help.start()' for an HTML browser interface to help. 182s Type 'q()' to quit R. 182s 182s > suppressPackageStartupMessages(library(stars)) 182s > bcsd_obs 182s stars_proxy object with 2 attributes in 2 file(s): 182s $foo 182s [1] "[...]/bcsd_obs_1999.nc:pr" 182s 182s $bar 182s [1] "[...]/bcsd_obs_1999.nc:tas" 182s 182s dimension(s): 182s from to offset delta refsys values x/y 182s x 1 81 -85 0.125 NA NULL [x] 182s y 1 33 37.12 -0.125 NA NULL [y] 182s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 182s > L7_ETMs 182s stars_proxy object with 1 attribute in 1 file(s): 182s $L7_ETMs 182s [1] "[...]/L7_ETMs.tif" 182s 182s dimension(s): 182s from to offset delta refsys point x/y 182s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 182s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 182s band 1 6 NA NA NA NA 182s > if (require(starsdata, quietly = TRUE)) { 182s + print(stars_sentinel2) 182s + } 182s > 182s BEGIN TEST dimensions.R 182s 182s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 182s Copyright (C) 2025 The R Foundation for Statistical Computing 182s Platform: x86_64-pc-linux-gnu 182s 182s R is free software and comes with ABSOLUTELY NO WARRANTY. 182s You are welcome to redistribute it under certain conditions. 182s Type 'license()' or 'licence()' for distribution details. 182s 182s R is a collaborative project with many contributors. 182s Type 'contributors()' for more information and 182s 'citation()' on how to cite R or R packages in publications. 182s 182s Type 'demo()' for some demos, 'help()' for on-line help, or 182s 'help.start()' for an HTML browser interface to help. 182s Type 'q()' to quit R. 182s 182s > # https://github.com/r-spatial/stars/issues/295 182s > suppressPackageStartupMessages(library(stars)) 182s > raw <- read_stars(system.file("nc/bcsd_obs_1999.nc", package = "stars")) 182s pr, tas, 182s > foo <- function(x, idx) stats::lowess(idx, x)$y 182s > 182s > timeline <- st_get_dimension_values(raw, "time") 182s > smooth = st_apply(raw, 182s + MARGIN = c("x", "y"), 182s + FUN = foo, 182s + idx = st_get_dimension_values(raw, "time") 182s + ) 183s > 183s > st_set_dimensions(smooth, 183s + which = "foo", 183s + values = st_get_dimension_values(raw, "time"), 183s + names = "time" 183s + ) 183s stars object with 3 dimensions and 2 attributes 183s attribute(s): 183s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 183s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 183s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 183s dimension(s): 183s from to offset delta refsys values x/y 183s time 1 12 NA NA Date 1999-01-31,...,1999-12-31 183s x 1 81 -85 0.125 NA NULL [x] 183s y 1 33 37.12 -0.125 NA NULL [y] 183s > 183s > raw %>% 183s + st_apply(MARGIN = c("x", "y"), FUN = foo, idx = timeline) %>% 183s + st_set_dimensions("foo", st_dimensions(raw)["time"]) 183s stars object with 3 dimensions and 2 attributes 183s attribute(s): 183s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 183s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 183s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 183s dimension(s): 183s from to offset delta refsys values x/y 183s time 1 12 NA NA Date 1999-01-31,...,1999-12-31 183s x 1 81 -85 0.125 NA NULL [x] 183s y 1 33 37.12 -0.125 NA NULL [y] 183s > 183s BEGIN TEST downsample.R 183s 183s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 183s Copyright (C) 2025 The R Foundation for Statistical Computing 183s Platform: x86_64-pc-linux-gnu 183s 183s R is free software and comes with ABSOLUTELY NO WARRANTY. 183s You are welcome to redistribute it under certain conditions. 183s Type 'license()' or 'licence()' for distribution details. 183s 183s R is a collaborative project with many contributors. 183s Type 'contributors()' for more information and 183s 'citation()' on how to cite R or R packages in publications. 183s 183s Type 'demo()' for some demos, 'help()' for on-line help, or 183s 'help.start()' for an HTML browser interface to help. 183s Type 'q()' to quit R. 183s 183s > suppressPackageStartupMessages(library(stars)) 183s > m = matrix(1:121, 11, 11) 183s > m 183s [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] 183s [1,] 1 12 23 34 45 56 67 78 89 100 111 183s [2,] 2 13 24 35 46 57 68 79 90 101 112 183s [3,] 3 14 25 36 47 58 69 80 91 102 113 183s [4,] 4 15 26 37 48 59 70 81 92 103 114 183s [5,] 5 16 27 38 49 60 71 82 93 104 115 183s [6,] 6 17 28 39 50 61 72 83 94 105 116 183s [7,] 7 18 29 40 51 62 73 84 95 106 117 183s [8,] 8 19 30 41 52 63 74 85 96 107 118 183s [9,] 9 20 31 42 53 64 75 86 97 108 119 183s [10,] 10 21 32 43 54 65 76 87 98 109 120 183s [11,] 11 22 33 44 55 66 77 88 99 110 121 183s > s = st_as_stars(m) 183s > st_downsample(s, 1) 183s stars object with 2 dimensions and 1 attribute 183s attribute(s): 183s Min. 1st Qu. Median Mean 3rd Qu. Max. 183s A1 1 28.5 61 61 93.5 121 183s dimension(s): 183s from to offset delta point x/y 183s X1 1 6 0 2 FALSE [x] 183s X2 1 6 0 2 FALSE [y] 183s > st_downsample(s, 1)[[1]] 183s [,1] [,2] [,3] [,4] [,5] [,6] 183s [1,] 1 23 45 67 89 111 183s [2,] 3 25 47 69 91 113 183s [3,] 5 27 49 71 93 115 183s [4,] 7 29 51 73 95 117 183s [5,] 9 31 53 75 97 119 183s [6,] 11 33 55 77 99 121 183s > st_downsample(s, 1, offset = 1) 183s stars object with 2 dimensions and 1 attribute 183s attribute(s): 183s Min. 1st Qu. Median Mean 3rd Qu. Max. 183s A1 13 37 61 61 85 109 183s dimension(s): 183s from to offset delta point x/y 183s X1 1 5 1 2 FALSE [x] 183s X2 1 5 1 2 FALSE [y] 183s > st_downsample(s, 1, offset = 1)[[1]] 183s [,1] [,2] [,3] [,4] [,5] 183s [1,] 13 35 57 79 101 183s [2,] 15 37 59 81 103 183s [3,] 17 39 61 83 105 183s [4,] 19 41 63 85 107 183s [5,] 21 43 65 87 109 183s > st_downsample(s, 1, FUN = mean) 183s stars object with 2 dimensions and 1 attribute 183s attribute(s): 183s Min. 1st Qu. Median Mean 3rd Qu. Max. 183s A1 7 31 55 55 79 103 183s dimension(s): 183s from to offset delta point x/y 183s X1 1 5 0 2 FALSE [x] 183s X2 1 5 0 2 FALSE [y] 183s > st_downsample(s, 1, FUN = mean)[[1]] 183s [,1] [,2] [,3] [,4] [,5] 183s [1,] 7 29 51 73 95 183s [2,] 9 31 53 75 97 183s [3,] 11 33 55 77 99 183s [4,] 13 35 57 79 101 183s [5,] 15 37 59 81 103 183s > st_downsample(s, 1, offset = 1, FUN = mean) 183s stars object with 2 dimensions and 1 attribute 183s attribute(s): 183s Min. 1st Qu. Median Mean 3rd Qu. Max. 183s A1 19 43 67 67 91 115 183s dimension(s): 183s from to offset delta point x/y 183s X1 1 5 1 2 FALSE [x] 183s X2 1 5 1 2 FALSE [y] 183s > st_downsample(s, 1, offset = c(0,1), FUN = mean)[[1]] 183s [,1] [,2] [,3] [,4] [,5] 183s [1,] 18 40 62 84 106 183s [2,] 20 42 64 86 108 183s [3,] 22 44 66 88 110 183s [4,] 24 46 68 90 112 183s [5,] 26 48 70 92 114 183s > st_downsample(s, 1, offset = c(0,1)) 183s stars object with 2 dimensions and 1 attribute 183s attribute(s): 183s Min. 1st Qu. Median Mean 3rd Qu. Max. 183s A1 12 36.5 61 61 85.5 110 183s dimension(s): 183s from to offset delta point x/y 183s X1 1 6 0 2 FALSE [x] 183s X2 1 5 1 2 FALSE [y] 183s > st_downsample(s, 1, offset = c(0,1))[[1]] 183s [,1] [,2] [,3] [,4] [,5] 183s [1,] 12 34 56 78 100 183s [2,] 14 36 58 80 102 183s [3,] 16 38 60 82 104 183s [4,] 18 40 62 84 106 183s [5,] 20 42 64 86 108 183s [6,] 22 44 66 88 110 183s > 183s BEGIN TEST ee.R 183s 183s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 183s Copyright (C) 2025 The R Foundation for Statistical Computing 183s Platform: x86_64-pc-linux-gnu 183s 183s R is free software and comes with ABSOLUTELY NO WARRANTY. 183s You are welcome to redistribute it under certain conditions. 183s Type 'license()' or 'licence()' for distribution details. 183s 183s R is a collaborative project with many contributors. 183s Type 'contributors()' for more information and 183s 'citation()' on how to cite R or R packages in publications. 183s 183s Type 'demo()' for some demos, 'help()' for on-line help, or 183s 'help.start()' for an HTML browser interface to help. 183s Type 'q()' to quit R. 183s 183s > # show that extract with exact=TRUE equals st_interpolate_aw(), only much faster 183s > options(digits=15) 183s > suppressPackageStartupMessages(library(stars)) 184s > L = st_as_stars(L7_ETMs)[,,,1] 184s > set.seed(123432) 184s > st_bbox(L) |> 184s + st_as_sfc() |> 184s + st_centroid() |> 184s + st_buffer(50) |> 184s + st_sample(10) |> 184s + st_combine() |> 184s + st_convex_hull() -> ch 184s > if (interactive()) { 184s + plot(L, reset = FALSE) 184s + plot(ch, add = TRUE, border = 'red', col = NA) 184s + } 184s > if (FALSE) { 184s + e = st_extract(L, ch)[[1]] 184s + a = aggregate(L, ch, mean)[[1]] 184s + identical(e, a) # same code path 184s + ee = aggregate(L, ch, mean, exact = TRUE)[[1]] 184s + all.equal(e, ee) 184s + aw = suppressWarnings(st_interpolate_aw(L, ch, extensive = FALSE)$V1) 184s + all.equal(as.vector(ee), aw) 184s + ee0 = st_extract(L, ch, exact = TRUE)[[1]] 184s + all.equal(ee0, ee) # ?? 184s + } 184s > 184s BEGIN TEST extract.R 184s 184s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 184s Copyright (C) 2025 The R Foundation for Statistical Computing 184s Platform: x86_64-pc-linux-gnu 184s 184s R is free software and comes with ABSOLUTELY NO WARRANTY. 184s You are welcome to redistribute it under certain conditions. 184s Type 'license()' or 'licence()' for distribution details. 184s 184s R is a collaborative project with many contributors. 184s Type 'contributors()' for more information and 184s 'citation()' on how to cite R or R packages in publications. 184s 184s Type 'demo()' for some demos, 'help()' for on-line help, or 184s 'help.start()' for an HTML browser interface to help. 184s Type 'q()' to quit R. 184s 184s > # Create 'stars' object 184s > set.seed(1331) 184s > suppressPackageStartupMessages(library(stars)) 184s > volcano = rbind(volcano, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA) # add NA rows 184s > d = st_dimensions(x = 1:ncol(volcano), y = 1:nrow(volcano)) 184s > (r = st_as_stars(t(volcano))) 184s stars object with 2 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 184s A1 94 108 124 130.1879 150 195 732 184s dimension(s): 184s from to offset delta point x/y 184s X1 1 61 0 1 FALSE [x] 184s X2 1 99 0 1 FALSE [y] 184s > r = st_set_dimensions(r, 1, offset = 0, delta = 1) 184s > r = st_set_dimensions(r, 2, offset = nrow(volcano), delta = -1) 184s > 184s > # Create points 184s > pnt = st_sample(st_as_sfc(st_bbox(r)), 100) 184s > pnt = st_as_sf(pnt) 184s > 184s > # Extract - 'st_join' 184s > x = st_join(pnt, st_as_sf(r)) 184s > 184s > # Extract - 'st_extract' 184s > y = st_extract(r, pnt) 184s > 184s > # check there are NA's: 184s > any(is.na(x)) 184s [1] TRUE 184s > # Compare 184s > all.equal(x$A1, y[[1]]) 184s [1] TRUE 184s > 184s > ################################################ 184s > if (FALSE) { 184s + 184s + ## tic: segfaults 184s + # check equal results with stars_proxy: 184s + #x = st_extract(stars:::st_as_stars_proxy(r), pnt) 184s + #all.equal(x$A1, y[[1]]) 184s + #all.equal(x, y) 184s + 184s + r = c(r, 2*r, 10*r) 184s + x = st_join(pnt, st_as_sf(r)) 184s + y = st_as_sf(st_extract(r, pnt)) 184s + all.equal(x, y) 184s + 184s + ## tic: segfaults 184s + #x = st_extract(stars:::st_as_stars_proxy(merge(r)), pnt) 184s + #all.equal(st_as_sf(x), y) 184s + 184s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 184s + xp = read_stars(tif, proxy = TRUE) 184s + xm = read_stars(tif, proxy = FALSE) 184s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 184s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 184s + em = st_extract(xm, pts) 184s + if (utils::packageVersion("sf") >= "0.9-7") { 184s + ep = st_extract(xp, pts) 184s + print(all.equal(ep, em, check.attributes = TRUE)) 184s + } 184s + 184s + # two-attribute objects: 184s + library(stars) 184s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 184s + xp = read_stars(c(tif, tif), proxy = TRUE) 184s + xm = read_stars(c(tif, tif), proxy = FALSE) 184s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 184s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 184s + em = st_extract(xm, pts) 184s + if (utils::packageVersion("sf") >= "0.9-7") { 184s + ep = st_extract(xp, pts) 184s + print(all.equal(ep, em, check.attributes = TRUE)) 184s + } 184s + 184s + # single-attribute, single raster objects: 184s + tif1 = paste0(tempfile(), ".tif") 184s + write_stars(xm[1,,,1], "x.tif") 184s + xp = read_stars("x.tif", proxy = TRUE) 184s + xm = read_stars("x.tif", proxy = FALSE) 184s + em = st_extract(xm, pts) 184s + if (utils::packageVersion("sf") >= "0.9-7") { 184s + ep = st_extract(xp, pts) 184s + print(all.equal(ep, em, check.attributes = TRUE)) 184s + } 184s + 184s + # multiple-file attributes: 184s + x = c( 184s + "avhrr-only-v2.19810901.nc", 184s + "avhrr-only-v2.19810902.nc", 184s + "avhrr-only-v2.19810903.nc", 184s + "avhrr-only-v2.19810904.nc", 184s + "avhrr-only-v2.19810905.nc", 184s + "avhrr-only-v2.19810906.nc", 184s + "avhrr-only-v2.19810907.nc", 184s + "avhrr-only-v2.19810908.nc", 184s + "avhrr-only-v2.19810909.nc" 184s + ) 184s + file_list = system.file(paste0("netcdf/", x), package = "starsdata") 184s + if (!identical(file_list, "")) { 184s + y = read_stars(file_list, quiet = TRUE) 184s + print(y) 184s + st_crs(y) = "OGC:CRS84" 184s + pts = st_sample(st_as_sfc(st_bbox(y)), 10) 184s + em = st_extract(y, pts) 184s + 184s + (y = read_stars(file_list, quiet = TRUE, proxy = TRUE)) 184s + print(y) 184s + st_crs(y) = "OGC:CRS84" 184s + if (utils::packageVersion("sf") >= "0.9-7") { 184s + ep = st_extract(y, pts) 184s + print(all.equal(em, ep)) 184s + } 184s + } 184s + 184s + # nearest & bilinear comparison: 184s + if (utils::packageVersion("sf") >= "0.9-7") { 184s + set.seed(12331) 184s + s = st_as_stars(matrix(rnorm(16), 4)) 184s + pts = st_sample(st_as_sfc(st_bbox(s)), 10000, type = "regular") 184s + s1 = st_extract(s, pts, bilinear = FALSE) 184s + s2 = st_extract(s, pts, bilinear = TRUE) 184s + s1$s2 = s2[[1]] 184s + names(s1)[c(1,3)] = c("nearest", "bilinear") 184s + print(s1[sample(10000, 5),]) 184s + } 184s + } 184s > 184s BEGIN TEST gridtypes.R 184s 184s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 184s Copyright (C) 2025 The R Foundation for Statistical Computing 184s Platform: x86_64-pc-linux-gnu 184s 184s R is free software and comes with ABSOLUTELY NO WARRANTY. 184s You are welcome to redistribute it under certain conditions. 184s Type 'license()' or 'licence()' for distribution details. 184s 184s R is a collaborative project with many contributors. 184s Type 'contributors()' for more information and 184s 'citation()' on how to cite R or R packages in publications. 184s 184s Type 'demo()' for some demos, 'help()' for on-line help, or 184s 'help.start()' for an HTML browser interface to help. 184s Type 'q()' to quit R. 184s 184s > suppressPackageStartupMessages(library(stars)) 184s > 184s > # regular, but not spatial: 184s > d = st_dimensions(a = 1:3, b = 1:3, band = c("foo", "bar")) 184s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 184s stars object with 3 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s X 1 5.25 9.5 9.5 13.75 18 184s dimension(s): 184s from to offset delta point values 184s a 1 3 1 1 FALSE NULL 184s b 1 3 1 1 FALSE NULL 184s band 1 2 NA NA FALSE foo, bar 184s > as.data.frame(st, add_max=FALSE)[1:4,] 184s a b band X 184s 1 1 1 foo 1 184s 2 2 1 foo 2 184s 3 3 1 foo 3 184s 4 1 2 foo 4 184s > try(x <- st_bbox(st)) # error 184s > 184s > # regular, geotransform: 184s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 184s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 184s stars object with 3 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s X 1 5.25 9.5 9.5 13.75 18 184s dimension(s): 184s from to offset delta point values x/y 184s x 1 3 1 1 FALSE NULL [x] 184s y 1 3 1 1 FALSE NULL [y] 184s band 1 2 NA NA FALSE foo, bar 184s Error in st_bbox.dimensions(st_dimensions(obj), ...) : 184s dimensions table does not have x & y, nor an sfc dimension 184s > as.data.frame(st, add_max=FALSE)[1:4,] 184s x y band X 184s 1 1.5 1.5 foo 1 184s 2 2.5 1.5 foo 2 184s 3 3.5 1.5 foo 3 184s 4 1.5 2.5 foo 4 184s > as.data.frame(st, add_max=TRUE)[1:4,] 184s x y band x_max y_max X 184s 1 1 1 foo 2 2 1 184s 2 2 1 foo 3 2 2 184s 3 3 1 foo 4 2 3 184s 4 1 2 foo 2 3 4 184s > st_bbox(st) 184s xmin ymin xmax ymax 184s 1 1 4 4 184s > 184s > # rectilinear with offset given: 184s > xd = c(1, 2, 4) 184s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 184s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 184s stars object with 3 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s X 1 5.25 9.5 9.5 13.75 18 184s dimension(s): 184s from to offset delta point values x/y 184s x 1 3 NA NA FALSE [1,2), [2,4), [4,6) [x] 184s y 1 3 1 1 FALSE NULL [y] 184s band 1 2 NA NA FALSE foo, bar 184s > as.data.frame(st, add_max=FALSE)[1:4,] 184s x y band X 184s 1 1.5 1.5 foo 1 184s 2 3.0 1.5 foo 2 184s 3 5.0 1.5 foo 3 184s 4 1.5 2.5 foo 4 184s > as.data.frame(st, add_max=TRUE)[1:4,] 184s x y band x_max y_max X 184s 1 1 1 foo 2 2 1 184s 2 2 1 foo 4 2 2 184s 3 4 1 foo 6 2 3 184s 4 1 2 foo 2 3 4 184s > st_bbox(st) 184s xmin ymin xmax ymax 184s 1 1 6 4 184s > 184s > # rectilinear with midpoints given: 184s > xd = c(1, 2, 4) 184s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE) 184s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 184s stars object with 3 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s X 1 5.25 9.5 9.5 13.75 18 184s dimension(s): 184s from to offset delta point values x/y 184s x 1 3 NA NA FALSE [0.5,1.5), [1.5,3.0), [3.0,5.0) [x] 184s y 1 3 0.5 1 FALSE NULL [y] 184s band 1 2 NA NA FALSE foo, bar 184s > as.data.frame(st, add_max=FALSE)[1:4,] 184s x y band X 184s 1 1.00 1 foo 1 184s 2 2.25 1 foo 2 184s 3 4.00 1 foo 3 184s 4 1.00 2 foo 4 184s > as.data.frame(st, add_max=TRUE)[1:4,] 184s x y band x_max y_max X 184s 1 0.5 0.5 foo 1.5 1.5 1 184s 2 1.5 0.5 foo 3.0 1.5 2 184s 3 3.0 0.5 foo 5.0 1.5 3 184s 4 0.5 1.5 foo 1.5 2.5 4 184s > st_bbox(st) 184s xmin ymin xmax ymax 184s 0.5 0.5 5.0 3.5 184s > 184s > # rectilinear with midpoints given, point support 184s > xd = c(1, 2, 4) 184s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE, point = TRUE) 184s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 184s stars object with 3 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s X 1 5.25 9.5 9.5 13.75 18 184s dimension(s): 184s from to offset delta point values x/y 184s x 1 3 NA NA TRUE 1, 2, 4 [x] 184s y 1 3 0.5 1 TRUE NULL [y] 184s band 1 2 NA NA TRUE foo, bar 184s > as.data.frame(st, add_max=FALSE)[1:4,] 184s x y band X 184s 1 1 1 foo 1 184s 2 2 1 foo 2 184s 3 4 1 foo 3 184s 4 1 2 foo 4 184s > as.data.frame(st, add_max=TRUE)[1:4,] 184s x y band x_max y_max X 184s 1 1 0.5 foo 1 1.5 1 184s 2 2 0.5 foo 2 1.5 2 184s 3 4 0.5 foo 4 1.5 3 184s 4 1 1.5 foo 1 2.5 4 184s > st_bbox(st) 184s xmin ymin xmax ymax 184s 1.0 0.5 4.0 3.5 184s > 184s > # rectilinear with start/end given: 184s > #xd = stars:::make_intervals(start = c(1,2,4), end = c(2, 4, 8)) 184s > xd = c(1, 2, 4, 8) # one more than dim of the data array 184s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 184s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 184s stars object with 3 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s X 1 5.25 9.5 9.5 13.75 18 184s dimension(s): 184s from to offset delta point values x/y 184s x 1 3 NA NA FALSE [1,2), [2,4), [4,8) [x] 184s y 1 3 1 1 FALSE NULL [y] 184s band 1 2 NA NA FALSE foo, bar 184s > as.data.frame(st, add_max=FALSE)[1:4,] 184s x y band X 184s 1 1.5 1.5 foo 1 184s 2 3.0 1.5 foo 2 184s 3 6.0 1.5 foo 3 184s 4 1.5 2.5 foo 4 184s > as.data.frame(st, add_max=TRUE)[1:4,] 184s x y band x_max y_max X 184s 1 1 1 foo 2 2 1 184s 2 2 1 foo 4 2 2 184s 3 4 1 foo 8 2 3 184s 4 1 2 foo 2 3 4 184s > st_bbox(st) 184s xmin ymin xmax ymax 184s 1 1 8 4 184s > 184s > # with sfc: 184s > sfc = st_sfc(st_point(0:1), st_point(2:1), st_point(4:3)) 184s > d = st_dimensions(x = sfc, y = 1:3, band = c("foo", "bar")) 184s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 184s stars object with 3 dimensions and 1 attribute 184s attribute(s): 184s Min. 1st Qu. Median Mean 3rd Qu. Max. 184s X 1 5.25 9.5 9.5 13.75 18 184s dimension(s): 185s from to offset delta point values 185s x 1 3 NA NA TRUE POINT (0 1),...,POINT (4 3) 185s y 1 3 1 1 FALSE NULL 185s band 1 2 NA NA FALSE foo, bar 185s > as.data.frame(st, add_max=FALSE)[1:4,] 185s x y band X 185s 1 POINT (0 1) 1 foo 1 185s 2 POINT (2 1) 1 foo 2 185s 3 POINT (4 3) 1 foo 3 185s 4 POINT (0 1) 2 foo 4 185s > st_as_sf(st, long = TRUE)[1:4,] 185s Simple feature collection with 4 features and 3 fields 185s Geometry type: POINT 185s Dimension: XY 185s Bounding box: xmin: 0 ymin: 1 xmax: 4 ymax: 3 185s CRS: NA 185s y band X x 185s 1 1 foo 1 POINT (0 1) 185s 2 1 foo 2 POINT (2 1) 185s 3 1 foo 3 POINT (4 3) 185s 4 2 foo 4 POINT (0 1) 185s > st_bbox(st) 185s xmin ymin xmax ymax 185s 0 1 4 3 185s > 185s > # rotated/sheared: 185s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), affine = c(0.2, -0.2)) 185s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 185s stars object with 3 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s X 1 5.25 9.5 9.5 13.75 18 185s dimension(s): 185s from to offset delta point values x/y 185s x 1 3 1 1 FALSE NULL [x] 185s y 1 3 1 1 FALSE NULL [y] 185s band 1 2 NA NA FALSE foo, bar 185s sheared raster with parameters: 0.2 -0.2 185s > as.data.frame(st, add_max=FALSE)[1:4,] 185s x y X 185s 1 1.6 1.4 1 185s 2 2.6 1.2 2 185s 3 3.6 1.0 3 185s 4 1.8 2.4 4 185s > try(as.data.frame(st, add_max=TRUE)[1:4,]) # errors 185s > st_bbox(st) 185s xmin ymin xmax ymax 185s 1.0 0.4 4.6 4.0 185s > 185s > # curvilinear: 185s > set.seed(13531) 185s > lon = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 185s Error in st_coordinates.stars(x, add_max = add_max, center = center, ...) : 185s add_max will not work for rotated/shared rasters 185s > lat = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 185s > ll = setNames(c(lon, lat), c("lon", "lat")) 185s > d = st_dimensions(lon = 1:3, lat = 1:3) 185s > a = st_as_stars(list(X = array(1:9, c(3,3))), dimensions = d) 185s > (st = st_as_stars(a, curvilinear = ll)) 185s stars object with 2 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s X 1 3 5 5 7 9 185s dimension(s): 185s from to refsys point values x/y 185s lon 1 3 WGS 84 (CRS84) FALSE [3x3] 0.03,...,0.89 [x] 185s lat 1 3 WGS 84 (CRS84) FALSE [3x3] 0.021,...,0.89 [y] 185s curvilinear grid 185s > as.data.frame(st) 185s lon lat X 185s 1 0.89 0.250 1 185s 2 0.64 0.510 2 185s 3 0.30 0.670 3 185s 4 0.69 0.890 4 185s 5 0.47 0.890 5 185s 6 0.26 0.190 6 185s 7 0.57 0.021 7 185s 8 0.27 0.220 8 185s 9 0.03 0.340 9 185s > st_bbox(st) 185s xmin ymin xmax ymax 185s 0.030 0.021 0.890 0.890 185s > 185s > # time regular: 185s > t = as.Date("2019-01-20") + 0:3 185s > d = st_dimensions(t, sfc) 185s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 185s stars object with 2 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s a 1 3.75 6.5 6.5 9.25 12 185s dimension(s): 185s from to offset delta refsys point values 185s X1 1 4 2019-01-20 1 days Date FALSE NULL 185s X2 1 3 NA NA NA TRUE POINT (0 1),...,POINT (4 3) 185s > as.data.frame(st) 185s X1 X2 a 185s 1 2019-01-20 POINT (0 1) 1 185s 2 2019-01-21 POINT (0 1) 2 185s 3 2019-01-22 POINT (0 1) 3 185s 4 2019-01-23 POINT (0 1) 4 185s 5 2019-01-20 POINT (2 1) 5 185s 6 2019-01-21 POINT (2 1) 6 185s 7 2019-01-22 POINT (2 1) 7 185s 8 2019-01-23 POINT (2 1) 8 185s 9 2019-01-20 POINT (4 3) 9 185s 10 2019-01-21 POINT (4 3) 10 185s 11 2019-01-22 POINT (4 3) 11 185s 12 2019-01-23 POINT (4 3) 12 185s > 185s > # time, rectilinear 185s > t = as.Date("2019-01-20") + c(0, 2, 3, 10) 185s > d = st_dimensions(t, sfc) 185s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 185s stars object with 2 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s a 1 3.75 6.5 6.5 9.25 12 185s dimension(s): 185s from to refsys point values 185s X1 1 4 Date FALSE 2019-01-20,...,2019-01-30 185s X2 1 3 NA TRUE POINT (0 1),...,POINT (4 3) 185s > as.data.frame(st) 185s X1 X2 a 185s 1 2019-01-20 POINT (0 1) 1 185s 2 2019-01-22 POINT (0 1) 2 185s 3 2019-01-23 POINT (0 1) 3 185s 4 2019-01-30 POINT (0 1) 4 185s 5 2019-01-20 POINT (2 1) 5 185s 6 2019-01-22 POINT (2 1) 6 185s 7 2019-01-23 POINT (2 1) 7 185s 8 2019-01-30 POINT (2 1) 8 185s 9 2019-01-20 POINT (4 3) 9 185s 10 2019-01-22 POINT (4 3) 10 185s 11 2019-01-23 POINT (4 3) 11 185s 12 2019-01-30 POINT (4 3) 12 185s > 185s BEGIN TEST mdim.R 185s 185s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 185s Copyright (C) 2025 The R Foundation for Statistical Computing 185s Platform: x86_64-pc-linux-gnu 185s 185s R is free software and comes with ABSOLUTELY NO WARRANTY. 185s You are welcome to redistribute it under certain conditions. 185s Type 'license()' or 'licence()' for distribution details. 185s 185s R is a collaborative project with many contributors. 185s Type 'contributors()' for more information and 185s 'citation()' on how to cite R or R packages in publications. 185s 185s Type 'demo()' for some demos, 'help()' for on-line help, or 185s 'help.start()' for an HTML browser interface to help. 185s Type 'q()' to quit R. 185s 185s > Sys.setenv(TZ="") 185s > suppressPackageStartupMessages(library(stars)) 185s > matrix(1:4,2) 185s [,1] [,2] 185s [1,] 1 3 185s [2,] 2 4 185s > m = matrix(1:4,2) 185s > s = st_as_stars(m) 185s > 185s > s = st_set_dimensions(s, st_dimensions(s), xy = NULL) 185s > sfc = st_sfc(st_point(0:1), st_point(3:2)) 185s > s = st_set_dimensions(s, 1, sfc) |> st_set_crs(4326) 185s > tm = as.POSIXct("2023-03-04 12:35") + c(0, 3600) 185s > s = st_set_dimensions(s, 2, tm) 185s > f = tempfile(fileext = ".nc") 185s > write_mdim(s, f, as_float = FALSE) 185s > s2 = read_mdim(f) 185s Warning messages: 185s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 185s GDAL Error 6: SetIndexingVariable() not implemented 185s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 185s GDAL Error 6: SetIndexingVariable() not implemented 185s > #print(s2) 185s > print(all.equal(s, s2, check.attributes = FALSE)) 185s [1] TRUE 185s > print(all.equal(s, s2)) 185s [1] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"input\": 1 string mismatch >" 185s [2] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"wkt\": 1 string mismatch >" 185s [3] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"input\": 1 string mismatch > >" 185s [4] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"wkt\": 1 string mismatch > >" 185s [5] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"offset\": 'tzone' attributes are inconsistent ('' and 'UTC') >" 185s [6] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 185s > 185s > st_crs(sfc) = st_crs(s2) 185s > st_crs(s) = st_crs(s2) 185s > tm = as.Date("2023-02-25") + 0:1 185s > sd = st_set_dimensions(s, 2, tm) 185s > print(sd) 185s stars object with 2 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s A1 1 1.75 2.5 2.5 3.25 4 185s dimension(s): 185s from to offset delta refsys point values 185s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 185s X2 1 2 2023-02-25 1 days Date FALSE NULL 185s > sd = st_set_dimensions(sd, 1, sfc) 185s > print(sd) 185s stars object with 2 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s A1 1 1.75 2.5 2.5 3.25 4 185s dimension(s): 185s from to offset delta refsys point values 185s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 185s X2 1 2 2023-02-25 1 days Date FALSE NULL 185s > f = tempfile(fileext = ".nc") 185s > write_mdim(sd, f) 185s > sd2 = read_mdim(f) 185s Warning messages: 185s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 185s GDAL Error 6: SetIndexingVariable() not implemented 185s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 185s GDAL Error 6: SetIndexingVariable() not implemented 185s > print(sd2) 185s stars object with 2 dimensions and 1 attribute 185s attribute(s): 185s Min. 1st Qu. Median Mean 3rd Qu. Max. 185s A1 1 1.75 2.5 2.5 3.25 4 185s dimension(s): 185s from to offset delta refsys point values 185s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 185s X2 1 2 2023-02-25 1 days Date NA NULL 185s > print(all.equal(sd, sd2, check.attributes = FALSE)) 185s [1] TRUE 185s > print(all.equal(sd, sd2)) 185s [1] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 185s > # if (.Platform$OS.type == "unix") { 185s > # print(read_mdim(paste0("/vsizip/", (system.file("zarr/sic_daily_sample.zarr.zip", package = "stars")))) 185s > # } 185s > 185s BEGIN TEST nc.R 185s 185s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 185s Copyright (C) 2025 The R Foundation for Statistical Computing 185s Platform: x86_64-pc-linux-gnu 185s 185s R is free software and comes with ABSOLUTELY NO WARRANTY. 185s You are welcome to redistribute it under certain conditions. 185s Type 'license()' or 'licence()' for distribution details. 185s 185s R is a collaborative project with many contributors. 185s Type 'contributors()' for more information and 185s 'citation()' on how to cite R or R packages in publications. 185s 185s Type 'demo()' for some demos, 'help()' for on-line help, or 185s 'help.start()' for an HTML browser interface to help. 185s Type 'q()' to quit R. 185s 185s > # examples with the sf::nc polygon dataset NOT ABOUT NETCDF's, see e.g. stars.R netcdf.R 185s > suppressPackageStartupMessages(library(sf)) 185s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 186s > m = st_set_geometry(nc, NULL) 186s > n = as.matrix(m[c("BIR74", "SID74", "NWBIR74", "BIR79", "SID79", "NWBIR79")]) 186s > dim(n) = c(county = 100, var = 3, year = 2) 186s > dimnames(n) = list(county = nc$NAME, var = c("BIR", "SID", "NWBIR"), year = c(1974, 1979)) 186s > suppressPackageStartupMessages(library(stars)) 186s > (st = st_as_stars(pop = n)) 186s stars object with 3 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s pop 0 8 538 1657.032 1784 30757 186s dimension(s): 186s from to values 186s county 1 100 Ashe,...,Brunswick 186s var 1 3 BIR , SID , NWBIR 186s year 1 2 1974, 1979 186s > foo <- st %>% st_set_dimensions(1, st_geometry(nc)) # %>% st_set_dimensions(3, c(1974, 1979)) 186s > st %>% st_set_dimensions(1, st_geometry(nc)) %>% st_set_dimensions(names = c("geometries", "var", "year")) 186s stars object with 3 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s pop 0 8 538 1657.032 1784 30757 186s dimension(s): 186s from to refsys point 186s geometries 1 100 NAD27 FALSE 186s var 1 3 NA NA 186s year 1 2 NA NA 186s values 186s geometries MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s var BIR , SID , NWBIR 186s year 1974, 1979 186s > foo 186s stars object with 3 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s pop 0 8 538 1657.032 1784 30757 186s dimension(s): 186s from to refsys point 186s county 1 100 NAD27 FALSE 186s var 1 3 NA NA 186s year 1 2 NA NA 186s values 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s var BIR , SID , NWBIR 186s year 1974, 1979 186s > st_bbox(foo) 186s xmin ymin xmax ymax 186s -84.32385 33.88199 -75.45698 36.58965 186s > (x = st_as_sf(foo)) 186s Simple feature collection with 100 features and 6 fields 186s Geometry type: MULTIPOLYGON 186s Dimension: XY 186s Bounding box: xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965 186s Geodetic CRS: NAD27 186s First 10 features: 186s BIR.1974 SID.1974 NWBIR.1974 BIR.1979 SID.1979 NWBIR.1979 186s 1 1091 1 10 1364 0 19 186s 2 487 0 10 542 3 12 186s 3 3188 5 208 3616 6 260 186s 4 508 1 123 830 2 145 186s 5 1421 9 1066 1606 3 1197 186s 6 1452 7 954 1838 5 1237 186s 7 286 0 115 350 2 139 186s 8 420 0 254 594 2 371 186s 9 968 4 748 1190 2 844 186s 10 1612 1 160 2038 5 176 186s county 186s 1 MULTIPOLYGON (((-81.47276 3... 186s 2 MULTIPOLYGON (((-81.23989 3... 186s 3 MULTIPOLYGON (((-80.45634 3... 186s 4 MULTIPOLYGON (((-76.00897 3... 186s 5 MULTIPOLYGON (((-77.21767 3... 186s 6 MULTIPOLYGON (((-76.74506 3... 186s 7 MULTIPOLYGON (((-76.00897 3... 186s 8 MULTIPOLYGON (((-76.56251 3... 186s 9 MULTIPOLYGON (((-78.30876 3... 186s 10 MULTIPOLYGON (((-80.02567 3... 186s > frac = function(x) x[2] / x[1] 186s > frac2 = function(x) c(sidsr = x[2] / x[1], nwbr = x[3] / x[1]) 186s > frac2an = function(x) c(x[2] / x[1], x[3] / x[1]) 186s > st_apply(foo, c(1,3), frac) 186s stars object with 2 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s frac 0 0.001197874 0.001930504 0.002042241 0.002599348 0.00955414 186s dimension(s): 186s from to refsys point 186s county 1 100 NAD27 FALSE 186s year 1 2 NA NA 186s values 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s year 1974, 1979 186s > st_apply(foo, c(1,3), frac2) 186s stars object with 3 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 186s dimension(s): 186s from to refsys point 186s frac2 1 2 NA NA 186s county 1 100 NAD27 FALSE 186s year 1 2 NA NA 186s values 186s frac2 sidsr, nwbr 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s year 1974, 1979 186s > st_apply(foo, c(1,3), frac2an) 186s stars object with 3 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 186s dimension(s): 186s from to refsys point 186s frac2an 1 2 NA NA 186s county 1 100 NAD27 FALSE 186s year 1 2 NA NA 186s values 186s frac2an NULL 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s year 1974, 1979 186s > library(abind) 186s > (x = aperm(st_apply(foo, c(1,3), frac2), c(2,3,1))) 186s stars object with 3 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 186s dimension(s): 186s from to refsys point 186s county 1 100 NAD27 FALSE 186s year 1 2 NA NA 186s frac2 1 2 NA NA 186s values 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s year 1974, 1979 186s frac2 sidsr, nwbr 186s > y = aperm(st_apply(foo, c(1,3), frac2), c("county","year","frac2")) 186s > all.equal(st_dimensions(x), st_dimensions(y)) 186s [1] TRUE 186s > 186s > split(foo, 2) 186s stars object with 2 dimensions and 3 attributes 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s BIR 248 1176.75 2265 3761.770 4450.75 30757 186s SID 0 2.00 5 7.515 9.00 57 186s NWBIR 1 206.00 742 1201.810 1315.75 11631 186s dimension(s): 186s from to refsys point 186s county 1 100 NAD27 FALSE 186s year 1 2 NA NA 186s values 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s year 1974, 1979 186s > split(foo, 3) 186s stars object with 2 dimensions and 2 attributes 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s 1974 0 8 501.5 1452.367 1580.50 21588 186s 1979 0 9 614.0 1861.697 2040.25 30757 186s dimension(s): 186s from to refsys point 186s county 1 100 NAD27 FALSE 186s var 1 3 NA NA 186s values 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s var BIR , SID , NWBIR 186s > 186s > st_crs(foo) 186s Coordinate Reference System: 186s User input: NAD27 186s wkt: 186s GEOGCRS["NAD27", 186s DATUM["North American Datum 1927", 186s ELLIPSOID["Clarke 1866",6378206.4,294.978698213898, 186s LENGTHUNIT["metre",1]]], 186s PRIMEM["Greenwich",0, 186s ANGLEUNIT["degree",0.0174532925199433]], 186s CS[ellipsoidal,2], 186s AXIS["geodetic latitude (Lat)",north, 186s ORDER[1], 186s ANGLEUNIT["degree",0.0174532925199433]], 186s AXIS["geodetic longitude (Lon)",east, 186s ORDER[2], 186s ANGLEUNIT["degree",0.0174532925199433]], 186s USAGE[ 186s SCOPE["Geodesy."], 186s AREA["North and central America: Antigua and Barbuda - onshore. Bahamas - onshore plus offshore over internal continental shelf only. Belize - onshore. British Virgin Islands - onshore. Canada onshore - Alberta, British Columbia, Manitoba, New Brunswick, Newfoundland and Labrador, Northwest Territories, Nova Scotia, Nunavut, Ontario, Prince Edward Island, Quebec, Saskatchewan and Yukon - plus offshore east coast. Cuba - onshore and offshore. El Salvador - onshore. Guatemala - onshore. Honduras - onshore. Panama - onshore. Puerto Rico - onshore. Mexico - onshore plus offshore east coast. Nicaragua - onshore. United States (USA) onshore and offshore - Alabama, Alaska, Arizona, Arkansas, California, Colorado, Connecticut, Delaware, Florida, Georgia, Idaho, Illinois, Indiana, Iowa, Kansas, Kentucky, Louisiana, Maine, Maryland, Massachusetts, Michigan, Minnesota, Mississippi, Missouri, Montana, Nebraska, Nevada, New Hampshire, New Jersey, New Mexico, New York, North Carolina, North Dakota, Ohio, Oklahoma, Oregon, Pennsylvania, Rhode Island, South Carolina, South Dakota, Tennessee, Texas, Utah, Vermont, Virginia, Washington, West Virginia, Wisconsin and Wyoming - plus offshore . US Virgin Islands - onshore."], 186s BBOX[7.15,167.65,83.17,-47.74]], 186s ID["EPSG",4267]] 186s > plot(foo) 186s > 186s > # subset vector cube: 186s > foo[nc[1]] 186s stars object with 3 dimensions and 1 attribute 186s attribute(s): 186s Min. 1st Qu. Median Mean 3rd Qu. Max. 186s pop 0 8 538 1657.032 1784 30757 186s dimension(s): 186s from to refsys point 186s county 1 100 NAD27 FALSE 186s var 1 3 NA NA 186s year 1 2 NA NA 186s values 186s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 186s var BIR , SID , NWBIR 186s year 1974, 1979 186s > 186s BEGIN TEST plot.R 186s 186s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 186s Copyright (C) 2025 The R Foundation for Statistical Computing 186s Platform: x86_64-pc-linux-gnu 186s 186s R is free software and comes with ABSOLUTELY NO WARRANTY. 186s You are welcome to redistribute it under certain conditions. 186s Type 'license()' or 'licence()' for distribution details. 186s 186s R is a collaborative project with many contributors. 186s Type 'contributors()' for more information and 186s 'citation()' on how to cite R or R packages in publications. 186s 186s Type 'demo()' for some demos, 'help()' for on-line help, or 186s 'help.start()' for an HTML browser interface to help. 186s Type 'q()' to quit R. 186s 186s > suppressPackageStartupMessages(library(stars)) 186s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 186s + data(air) # this loads several datasets in .GlobalEnv 186s + dim(air) 186s + d = st_dimensions(station = st_as_sfc(stations), time = dates) 186s + aq = st_as_stars(list(PM10 = air), dimensions = d) 186s + image(aperm(log(aq), 2:1), main = "NA pattern (white) in PM10 station time series") 186s + st_geometry(aq) 186s + } 187s Geometry set for 70 features 187s Geometry type: POINT 187s Dimension: XY 187s Bounding box: xmin: 6.28107 ymin: 47.80847 xmax: 14.78617 ymax: 54.92497 187s Geodetic CRS: +proj=longlat +datum=WGS84 +no_defs 187s First 5 geometries: 187s POINT (9.585911 53.67057) 187s POINT (9.68503 53.52418) 187s POINT (9.791584 54.07312) 187s POINT (13.64701 52.44775) 187s POINT (13.29635 52.65315) 187s > 187s > csv = system.file("tif/ESACCI-LC-Legend.csv", package = "starsdata") 187s > if (csv != "") { 187s + rgb = read.csv(csv, header = TRUE, sep = ";") 187s + luc = read_stars(system.file("tif/LUC3.tif", package = "starsdata")) 187s + plot(luc, rgb = rgb, axes = TRUE, key.pos = NULL) 187s + } 187s > 187s > # https://github.com/r-spatial/stars/issues/233 : 187s > nc = read_sf(system.file("shape/nc.shp", package = "sf")) 187s > output = st_as_stars(st_bbox(nc), nx = 1, ny = 1, values = 1) 187s > plot(output) 187s Warning message: 187s In plot.stars(output) : 187s breaks="quantile" leads to a single class; maybe try breaks="equal" instead? 187s > 187s BEGIN TEST predict.R 187s 187s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 187s Copyright (C) 2025 The R Foundation for Statistical Computing 187s Platform: x86_64-pc-linux-gnu 187s 187s R is free software and comes with ABSOLUTELY NO WARRANTY. 187s You are welcome to redistribute it under certain conditions. 187s Type 'license()' or 'licence()' for distribution details. 187s 187s R is a collaborative project with many contributors. 187s Type 'contributors()' for more information and 187s 'citation()' on how to cite R or R packages in publications. 187s 187s Type 'demo()' for some demos, 'help()' for on-line help, or 187s 'help.start()' for an HTML browser interface to help. 187s Type 'q()' to quit R. 187s 187s > suppressPackageStartupMessages(library(stars)) 187s > # predict: 187s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 187s > (x = read_stars(tif)) 187s stars object with 3 dimensions and 1 attribute 187s attribute(s): 187s Min. 1st Qu. Median Mean 3rd Qu. Max. 187s L7_ETMs.tif 1 54 69 68.91242 86 255 187s dimension(s): 187s from to offset delta refsys point x/y 187s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 187s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 187s band 1 6 NA NA NA NA 187s > st_crs(x) = st_crs(x) # cleans trailing space 187s > model = lm(x~L7_ETMs.tif, head(as.data.frame(x), 50)) 187s > x = predict(x, model) 188s > 188s > (y = read_stars(tif, proxy = TRUE)) 188s stars_proxy object with 1 attribute in 1 file(s): 188s $L7_ETMs.tif 188s [1] "[...]/L7_ETMs.tif" 188s 188s dimension(s): 188s from to offset delta refsys point x/y 188s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 188s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 188s band 1 6 NA NA NA NA 188s > (yp = predict(y, model)) 188s stars_proxy object with 1 attribute in 1 file(s): 188s $L7_ETMs.tif 188s [1] "[...]/L7_ETMs.tif" 188s 188s dimension(s): 188s from to offset delta refsys point x/y 188s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 188s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 188s band 1 6 NA NA NA NA 188s call_list: 188s [[1]] 188s predict(object = object, model = model) 188s attr(,".Environment") 188s 188s 188s This object has pending lazy operations: dimensions as printed may not reflect this. 188s > all.equal(x, st_as_stars(yp)) 188s [1] TRUE 188s > 188s > yy = st_set_dimensions(y, 3, values = paste0("band", 1:6)) 188s > (y_spl = split(yy, 3)) 188s stars_proxy object with 1 attribute in 1 file(s): 188s $L7_ETMs.tif 188s [1] "[...]/L7_ETMs.tif" 188s 188s dimension(s): 188s from to offset delta refsys point values 188s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 188s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 188s band 1 6 NA NA NA NA band1,...,band6 188s x/y 188s x [x] 188s y [y] 188s band 188s call_list: 188s [[1]] 188s split(x = x, 3) 188s attr(,".Environment") 188s 188s 188s This object has pending lazy operations: dimensions as printed may not reflect this. 188s > as.data.frame(st_as_stars(split(yy, 3)))[1:3,] 188s x y band1 band2 band3 band4 band5 band6 188s 1 288790.5 9120747 69 56 46 79 86 46 188s 2 288819.0 9120747 69 57 49 75 88 49 188s 3 288847.5 9120747 63 52 45 66 75 41 188s > 188s BEGIN TEST proxy.R 189s 189s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 189s Copyright (C) 2025 The R Foundation for Statistical Computing 189s Platform: x86_64-pc-linux-gnu 189s 189s R is free software and comes with ABSOLUTELY NO WARRANTY. 189s You are welcome to redistribute it under certain conditions. 189s Type 'license()' or 'licence()' for distribution details. 189s 189s R is a collaborative project with many contributors. 189s Type 'contributors()' for more information and 189s 'citation()' on how to cite R or R packages in publications. 189s 189s Type 'demo()' for some demos, 'help()' for on-line help, or 189s 'help.start()' for an HTML browser interface to help. 189s Type 'q()' to quit R. 189s 189s > Sys.setenv(TZ="UTC") 189s > suppressPackageStartupMessages(library(sf)) 189s > suppressPackageStartupMessages(library(stars)) 189s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 189s > (r = read_stars(tif, proxy = TRUE)) 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s > if (interactive()) { 189s + plot(r) 189s + } 189s > dim(r) 189s x y band 189s 349 352 6 189s > r[,,,2:3] 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 2 3 NA NA NA NA 189s > r+r 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s call_list: 189s [[1]] 189s e1 + e2 189s attr(,".Environment") 189s 189s 189s This object has pending lazy operations: dimensions as printed may not reflect this. 189s > st_as_stars(sin(r), downsample = 2) 189s stars object with 3 dimensions and 1 attribute 189s attribute(s): 189s Min. 1st Qu. Median Mean 3rd Qu. Max. 189s L7_ETMs.tif -0.9999902 -0.676772 0.0353983 0.01655317 0.7210377 0.9999119 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 117 288776 85.01 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 118 9120761 -85.02 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s > aperm(r, c(3,2,1)) 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s call_list: 189s [[1]] 189s aperm(a = a, perm = perm) 189s attr(,".Environment") 189s 189s 189s This object has pending lazy operations: dimensions as printed may not reflect this. 189s > if (interactive()) { 189s + plot(r) 189s + } 189s > (xx = c(r,r)) 189s stars_proxy object with 2 attributes in 2 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s > st_redimension(xx) 189s stars_proxy object with 1 attribute in 2 file(s): 189s $L7_ETMs.tif.L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 189s band 1 6 NA NA NA NA 189s new_dim 1 2 NA NA NA NA 189s values x/y 189s x NULL [x] 189s y NULL [y] 189s band NULL 189s new_dim L7_ETMs.tif, L7_ETMs.tif 189s > st_as_stars(r) 189s stars object with 3 dimensions and 1 attribute 189s attribute(s): 189s Min. 1st Qu. Median Mean 3rd Qu. Max. 189s L7_ETMs.tif 1 54 69 68.91242 86 255 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s > (y = st_apply(r, 1:2, max)) 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s call_list: 189s [[1]] 189s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 189s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 189s attr(,".Environment") 189s 189s 189s This object has pending lazy operations: dimensions as printed may not reflect this. 189s > (yy = st_as_stars(y, downsample = 1)) 189s stars object with 2 dimensions and 1 attribute 189s attribute(s): 189s Min. 1st Qu. Median Mean 3rd Qu. Max. 189s max 55 85 96 99.38568 113 255 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s > (y = adrop(st_apply(r, c("x", "y"), max))) 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s call_list: 189s [[1]] 189s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 189s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 189s attr(,".Environment") 189s 189s 189s [[2]] 189s adrop(x = x, drop = drop) 189s attr(,".Environment") 189s 189s 189s This object has pending lazy operations: dimensions as printed may not reflect this. 189s > (yy = st_as_stars(y, downsample = 1)) 189s stars object with 2 dimensions and 1 attribute 189s attribute(s): 189s Min. 1st Qu. Median Mean 3rd Qu. Max. 189s max 55 85 96 99.38568 113 255 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s > plot(yy) 189s > (y = adrop(st_apply(r, c("x", "band"), max))) 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s call_list: 189s [[1]] 189s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 189s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 189s attr(,".Environment") 189s 189s 189s [[2]] 189s adrop(x = x, drop = drop) 189s attr(,".Environment") 189s 189s 189s This object has pending lazy operations: dimensions as printed may not reflect this. 189s > (yy = st_as_stars(y, downsample = 1)) 189s stars object with 2 dimensions and 1 attribute 189s attribute(s): 189s Min. 1st Qu. Median Mean 3rd Qu. Max. 189s max 77 111 133 137.8505 157 255 189s dimension(s): 189s from to offset delta refsys point 189s Warning message: 189s In FUN(X[[i]], ...) : 189s st_apply on x/y dimensions applied to downsampled image(s) 189s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE 189s band 1 6 NA NA NA NA 189s > rm(yy) 189s > 189s > (xx = c(r,r)) 189s stars_proxy object with 2 attributes in 2 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s > names(xx) = c("a", "b") 189s > xx["a"] 189s stars_proxy object with 1 attribute in 1 file(s): 189s $a 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 189s > buf = st_buffer(st_sfc(pt, crs = st_crs(r)), 1500) 189s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 189s + crs = st_crs(r)) 189s > r = r[buf] # crops 189s > r = r[buf, epsilon = 1e-5] # crops with shrinked bounding box 189s > 189s > # c: 189s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 189s > if (FALSE && f != "") { 189s + files = c("avhrr-only-v2.19810901.nc", 189s + "avhrr-only-v2.19810902.nc", 189s + "avhrr-only-v2.19810903.nc", 189s + "avhrr-only-v2.19810904.nc", 189s + "avhrr-only-v2.19810905.nc", 189s + "avhrr-only-v2.19810906.nc", 189s + "avhrr-only-v2.19810907.nc", 189s + "avhrr-only-v2.19810908.nc", 189s + "avhrr-only-v2.19810909.nc") 189s + l = list() 189s + for (f in files) { 189s + from = system.file(paste0("netcdf/", f), package = "starsdata") 189s + l[[f]] = read_stars(from, sub = c("sst", "anom"), proxy = TRUE) 189s + } 189s + ret = do.call(c, l) 189s + print(ret) 189s + all = system.file(paste0("netcdf/", files), package = "starsdata") 189s + ret = read_stars(all, sub = c("sst", "anom")) 189s + print(ret) 189s + print(st_redimension(ret)) # collapse the two attributes into new dimension 189s + 189s + try(ret <- c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 189s + #print(ret) 189s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 189s + #print(ret) 189s + ret <- st_redimension(l[[1]], along = list(times = as.Date("1981-09-01") + 0:1)) 189s + print(ret) 189s + } 189s > 189s > # demonstrate that environments work: 189s > x = read_stars(tif, proxy = TRUE) 189s > f = function(x) { 189s + g = function(xx) { 189s + ndvi = function(z1, z2, z3, z4, z5, z6) (z2-z1)/(z2+z1) 189s + st_apply(xx, 1:2, ndvi) 189s + } 189s + g(x) 189s + } 189s > (x = f(x)) 189s stars_proxy object with 1 attribute in 1 file(s): 189s $L7_ETMs.tif 189s [1] "[...]/L7_ETMs.tif" 189s 189s dimension(s): 189s from to offset delta refsys point x/y 189s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 189s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 189s band 1 6 NA NA NA NA 189s call_list: 189s [[1]] 189s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 189s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 189s attr(,".Environment") 189s 189s 189s This object has pending lazy operations: dimensions as printed may not reflect this. 189s > st_as_stars(x) 189s stars object with 2 dimensions and 1 attribute 189s attribute(s): 189s Min. 1st Qu. Median Mean 3rd Qu. Max. 189s ndvi -0.2828283 -0.1081081 -0.08287293 -0.08464615 -0.05882353 0.09259259 189s dimension(s): 190s from to offset delta refsys point x/y 190s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 190s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 190s > 190s BEGIN TEST raster.R 190s 190s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 190s Copyright (C) 2025 The R Foundation for Statistical Computing 190s Platform: x86_64-pc-linux-gnu 190s 190s R is free software and comes with ABSOLUTELY NO WARRANTY. 190s You are welcome to redistribute it under certain conditions. 190s Type 'license()' or 'licence()' for distribution details. 190s 190s R is a collaborative project with many contributors. 190s Type 'contributors()' for more information and 190s 'citation()' on how to cite R or R packages in publications. 190s 190s Type 'demo()' for some demos, 'help()' for on-line help, or 190s 'help.start()' for an HTML browser interface to help. 190s Type 'q()' to quit R. 190s 190s > options(rgdal_show_exportToProj4_warnings = "none") 190s > suppressPackageStartupMessages(library(stars)) 190s > 190s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require("raster", quietly = TRUE) && 190s + suppressPackageStartupMessages(require("terra", quietly = TRUE))) { 190s + 190s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 190s + (x = read_stars(tif)) 190s + (r = as(x, "Raster")) 190s + (y = st_as_stars(r)) 190s + 190s + # single band: 190s + x = adrop(x[,,,1]) 190s + r = as(x, "Raster") 190s + (y = st_as_stars(r)) 190s + 190s + # proxy: 190s + (x = read_stars(tif, proxy = TRUE)) 190s + (r = as(x, "Raster")) 190s + (y = st_as_stars(r)) 190s + (y2 = st_as_stars(r, proxy = TRUE)) 190s + } 193s stars_proxy object with 1 attribute in 1 file(s): 193s $L7_ETMs.tif 193s [1] "[...]/L7_ETMs.tif" 193s 193s dimension(s): 193s from to offset delta refsys point x/y 193s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 193s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 193s band 1 6 NA NA NA NA 193s > 193s > if (require(terra, quietly = TRUE)) { 193s + ## terra ------------- 193s + stopifnot(require(terra)) 193s + (x = read_stars(tif)) 193s + (r = as(x, "SpatRaster")) 193s + (y = st_as_stars(r)) 193s + 193s + # single band: 193s + x = adrop(x[,,,1]) 193s + r = as(x, "SpatRaster") 193s + (y = st_as_stars(r)) 193s + 193s + # proxy: 193s + (x = read_stars(tif, proxy = TRUE)) 193s + (r = as(x, "SpatRaster")) 193s + (y = st_as_stars(r)) 193s + (y2 = st_as_stars(r, proxy = TRUE)) 193s + 193s + f = system.file("tif/lc.tif", package = "stars") 193s + lc = read_stars(system.file("tif/lc.tif", package = "stars")) 193s + levels(lc[[1]]) 193s + r = rast(lc) 193s + e = attr(lc[[1]], "exclude") 193s + 193s + if (packageVersion("terra") >= "1.5.48") { 193s + 193s + print(all.equal(terra::levels(r)[[1]][,2], terra::levels(rast(f))[[1]][!e,2])) 193s + print(all.equal(terra::coltab(r)[[1]][!e,], terra::coltab(rast(f))[[1]][!e,], check.attributes = FALSE)) 193s + 193s + r<- rast(nrow=10, ncol=10) 193s + set.seed(5) 193s + values(r)<- sample(1:3, size = ncell(r), replace = TRUE) 193s + levels(r) <- data.frame(ID=1:3, category = c("c1", "c2", "c3")) 193s + 193s + r2<- rast(nrow=10, ncol=10) 193s + set.seed(6) 193s + values(r2)<- sample(c(0,2,3), size = ncell(r2), replace = TRUE) 193s + levels(r2) <- data.frame(ID=c(0,2,3), category = c("x1", "x2", "x3")) 193s + 193s + r3<- c(r,r2) 193s + names(r3)<- c("lyr.1", "lyr.2") 193s + 193s + r3_stars<- st_as_stars(r3) 193s + 193s + st_redimension(r3_stars) |> print() 193s + rast(r3_stars) |> levels() |> print() 193s + 193s + m = matrix(1:121, 11, 11) 193s + bb = st_bbox(c(xmin=0, xmax=11, ymin=0, ymax=11)) 193s + s = st_as_stars(bb, values = m) 193s + r = rast(s) 193s + aggregate(r, 2) |> st_as_stars() -> r.s 193s + stopifnot(isTRUE(all.equal(r.s[,1:5,1:5], st_downsample(s, 1, FUN = mean)))) 193s + } 193s + } 193s [1] TRUE 193s [1] TRUE 193s stars object with 3 dimensions and 1 attribute 193s attribute(s): 193s lyr.1.lyr.2 193s c1:34 193s c2:32 193s c3:34 193s x1:28 193s x2:37 193s x3:35 193s dimension(s): 193s from to offset delta refsys values x/y 193s x 1 10 -180 36 WGS 84 (CRS84) NULL [x] 193s y 1 10 90 -18 WGS 84 (CRS84) NULL [y] 193s new_dim 1 2 NA NA NA lyr.1, lyr.2 193s [[1]] 193s IDs categories 193s 1 1 c1 193s 2 2 c2 193s 3 3 c3 193s 193s [[2]] 193s IDs categories 193s 1 0 x1 193s 2 2 x2 193s 3 3 x3 193s 193s > 193s > 193s BEGIN TEST rasterize.R 193s 193s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 193s Copyright (C) 2025 The R Foundation for Statistical Computing 193s Platform: x86_64-pc-linux-gnu 193s 193s R is free software and comes with ABSOLUTELY NO WARRANTY. 193s You are welcome to redistribute it under certain conditions. 193s Type 'license()' or 'licence()' for distribution details. 193s 193s R is a collaborative project with many contributors. 193s Type 'contributors()' for more information and 193s 'citation()' on how to cite R or R packages in publications. 193s 193s Type 'demo()' for some demos, 'help()' for on-line help, or 193s 'help.start()' for an HTML browser interface to help. 193s Type 'q()' to quit R. 193s 194s > suppressPackageStartupMessages(library(stars)) 194s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 194s > (x = st_rasterize(nc)) # default grid: 194s stars object with 2 dimensions and 12 attributes 194s attribute(s): 194s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 194s AREA 0.042 0.108 0.142 1.451932e-01 0.181 0.241 30904 194s PERIMETER 0.999 1.461 1.716 1.786110e+00 2.004 3.640 30904 194s CNTY_ 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 194s CNTY_ID 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 194s FIPSNO 37001.000 37049.000 37101.000 3.710042e+04 37153.000 37199.000 30904 194s CRESS_ID 1.000 25.000 51.000 5.071206e+01 77.000 100.000 30904 194s BIR74 248.000 1323.000 2648.000 3.791637e+03 4139.000 21588.000 30904 194s SID74 0.000 3.000 5.000 7.891985e+00 10.000 44.000 30904 194s NWBIR74 1.000 297.000 844.000 1.246210e+03 1396.000 8027.000 30904 194s BIR79 319.000 1606.000 3108.000 4.852046e+03 5400.000 30757.000 30904 194s SID79 0.000 3.000 6.000 9.584098e+00 13.000 57.000 30904 194s NWBIR79 3.000 360.000 1058.000 1.604642e+03 1524.000 11631.000 30904 194s dimension(s): 194s from to offset delta refsys point x/y 194s x 1 461 -84.32 0.01925 NAD27 FALSE [x] 194s y 1 141 36.59 -0.01925 NAD27 FALSE [y] 194s > plot(x, axes = TRUE) 194s > # a bit more customized grid: 194s > (x = st_rasterize(nc, st_as_stars(st_bbox(nc), nx = 100, ny = 50, values = NA_real_))) 194s stars object with 2 dimensions and 12 attributes 194s attribute(s): 194s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 194s AREA 0.042 0.108 0.142 0.145536 0.181 0.241 2373 194s PERIMETER 0.999 1.470 1.716 1.789032 2.004 3.640 2373 194s CNTY_ 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 194s CNTY_ID 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 194s FIPSNO 37001.000 37049.000 37101.000 37100.327750 37151.000 37199.000 2373 194s CRESS_ID 1.000 25.000 51.000 50.663875 76.000 100.000 2373 194s BIR74 248.000 1323.500 2648.000 3790.530263 4139.000 21588.000 2373 194s SID74 0.000 3.000 5.000 7.905976 10.000 44.000 2373 194s NWBIR74 1.000 289.000 844.000 1246.116483 1396.000 8027.000 2373 194s BIR79 319.000 1606.000 3108.000 4848.231062 5386.000 30757.000 2373 194s SID79 0.000 3.000 6.000 9.574419 13.000 57.000 2373 194s NWBIR79 3.000 360.000 1058.000 1602.740769 1524.000 11631.000 2373 194s dimension(s): 194s from to offset delta refsys point x/y 194s x 1 100 -84.32 0.08867 NAD27 FALSE [x] 194s y 1 50 36.59 -0.05415 NAD27 FALSE [y] 194s > plot(x, axes = TRUE) 194s > (ls = st_sf(a = 1:2, st_sfc(st_linestring(rbind(c(0.1, 0), c(1.1, 1))), st_linestring(rbind(c(0, 0.05), c(1, 0.05)))))) 194s Simple feature collection with 2 features and 1 field 194s Geometry type: LINESTRING 194s Dimension: XY 194s Bounding box: xmin: 0 ymin: 0 xmax: 1.1 ymax: 1 194s CRS: NA 194s a 194s 1 1 194s 2 2 194s c..st_sfc.st_linestring.rbind.c.0.1..0...c.1.1..1.....st_linestring.rbind.c.0..........0.05...c.1..0.05...... 194s 1 LINESTRING (0.1 0, 1.1 1) 194s 2 LINESTRING (0 0.05, 1 0.05) 194s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = NA_real_)) 194s stars object with 2 dimensions and 1 attribute 194s attribute(s): 194s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 194s values NA NA NA NaN NA NA 100 194s dimension(s): 194s from to offset delta x/y 194s x 1 10 0 0.1 [x] 194s y 1 10 1 -0.1 [y] 194s > # the following two plots confirm that (only) the 194s > # upper-left corner is part of the grid cell (when dy is negative), leading 194s > # to a seemingly half-gridcell-shift problem: 194s > ## sf_extSoftVersion()["GDAL"] 194s > plot(st_rasterize(ls, grd), axes = TRUE, reset = FALSE) # ALL_TOUCHED=FALSE; 194s > plot(ls, add = TRUE, col = "red") 194s > plot(st_rasterize(ls, grd, options = "ALL_TOUCHED=TRUE"), axes = TRUE, reset = FALSE) 194s > plot(ls, add = TRUE, col = "red") 194s > # add lines to existing 0 values, summing values in case of multiple lines: 194s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = 0)) 194s stars object with 2 dimensions and 1 attribute 194s attribute(s): 194s Min. 1st Qu. Median Mean 3rd Qu. Max. 194s values 0 0 0 0 0 0 194s dimension(s): 194s from to offset delta x/y 194s x 1 10 0 0.1 [x] 194s y 1 10 1 -0.1 [y] 194s > r = st_rasterize(ls, grd, options = c("MERGE_ALG=ADD", "ALL_TOUCHED=TRUE")) 194s > plot(r, axes = TRUE, reset = FALSE) 194s > plot(ls, add = TRUE, col = "red") 194s > 194s BEGIN TEST rectilinear.R 194s 194s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 194s Copyright (C) 2025 The R Foundation for Statistical Computing 194s Platform: x86_64-pc-linux-gnu 194s 194s R is free software and comes with ABSOLUTELY NO WARRANTY. 194s You are welcome to redistribute it under certain conditions. 194s Type 'license()' or 'licence()' for distribution details. 194s 194s R is a collaborative project with many contributors. 194s Type 'contributors()' for more information and 194s 'citation()' on how to cite R or R packages in publications. 194s 194s Type 'demo()' for some demos, 'help()' for on-line help, or 194s 'help.start()' for an HTML browser interface to help. 194s Type 'q()' to quit R. 194s 194s > suppressPackageStartupMessages(library(stars)) 195s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 195s Error in st_set_dimensions(st, 2, values = c(2, 3, 4, 5, 8, 20)) : 195s length of values ( 6 ) does not match length of dimension 2 ( 4 ) 195s > x = read_stars(tif) 195s > (xx = x[,c(1:347,349),c(1:350,352),]) # rectilinear: one-but-last row & col missing 195s stars object with 3 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s L7_ETMs.tif 1 54 69 68.9915 86 255 195s dimension(s): 195s from to refsys point 195s x 1 348 SIRGAS 2000 / UTM zone 25S FALSE 195s y 1 351 SIRGAS 2000 / UTM zone 25S FALSE 195s band 1 6 NA NA 195s values x/y 195s x [288790.5,288819),...,[298708.5,298737) [x] 195s y [9120747,9120718),...,[9110743,9110715) [y] 195s band NULL 195s > image(xx) # chooses useRaster itself 195s > # see also tidy.R for a ggplot example, leaving out the row. 195s > 195s > m = matrix(1:16, 4, 4) 195s > x = 1:4 195s > y = 2:5 195s > (st = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 195s stars object with 2 dimensions and 1 attribute 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s m 1 4.75 8.5 8.5 12.25 16 195s dimension(s): 195s from to offset delta point x/y 195s x 1 4 1 1 FALSE [x] 195s y 1 4 2 1 FALSE [y] 195s > st = st_set_dimensions(st, 1, values = c(1,2,3,4,6)) 195s > st = st_set_dimensions(st, 2, values = c(2,3,4,5,8)) 195s > try(st_set_dimensions(st, 2, values = c(2,3,4,5,8,20))) # one too many 195s > 195s > # $<-.stars: 195s > st$foo = st$m * 2 195s > st 195s stars object with 2 dimensions and 2 attributes 195s attribute(s): 195s Min. 1st Qu. Median Mean 3rd Qu. Max. 195s m 1 4.75 8.5 8.5 12.25 16 195s foo 2 9.50 17.0 17.0 24.50 32 195s dimension(s): 195s from to point values x/y 195s x 1 4 FALSE [1,2),...,[4,6) [x] 195s y 1 4 FALSE [2,3),...,[5,8) [y] 195s > 195s > # st_as_sf: 195s > 195s > if (utils::packageVersion("sf") > "0.7.2") { 195s + plot(st_as_sf(st, as_points = FALSE), axes = TRUE) 195s + } 195s > 195s > image(st, text_values = TRUE, axes = TRUE) 195s > 195s BEGIN TEST redimension.R 195s 195s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 195s Copyright (C) 2025 The R Foundation for Statistical Computing 195s Platform: x86_64-pc-linux-gnu 195s 195s R is free software and comes with ABSOLUTELY NO WARRANTY. 195s You are welcome to redistribute it under certain conditions. 195s Type 'license()' or 'licence()' for distribution details. 195s 195s R is a collaborative project with many contributors. 195s Type 'contributors()' for more information and 195s 'citation()' on how to cite R or R packages in publications. 195s 195s Type 'demo()' for some demos, 'help()' for on-line help, or 195s 'help.start()' for an HTML browser interface to help. 195s Type 'q()' to quit R. 195s 195s > suppressPackageStartupMessages(library(stars)) 195s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 195s > r = read_stars(list(a = c(tif,tif), b = c(tif, tif)), proxy = TRUE) 195s > (xx = st_redimension(r, along = list(foo = 1:4))) 195s stars_proxy object with 1 attribute in 4 file(s): 195s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 195s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [4] "[...]/L7_ETMs.tif" 195s 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s foo 1 4 1 1 NA NA 195s > (rr = c(xx, xx)) 195s stars_proxy object with 2 attributes in 8 file(s): 195s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 195s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [4] "[...]/L7_ETMs.tif" 195s 195s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 195s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [4] "[...]/L7_ETMs.tif" 195s 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s foo 1 4 1 1 NA NA 195s > # st_as_stars(rr) 195s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 195s stars_proxy object with 1 attribute in 8 file(s): 195s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif.a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 195s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s foo 1 4 1 1 NA NA 195s bar 1 2 2001-01-01 365 days Date NA 195s > (rr = c(a = xx, b = xx)) 195s stars_proxy object with 2 attributes in 8 file(s): 195s $a 195s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [4] "[...]/L7_ETMs.tif" 195s 195s $b 195s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [4] "[...]/L7_ETMs.tif" 195s 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s foo 1 4 1 1 NA NA 195s > # st_as_stars(rr) 195s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 195s stars_proxy object with 1 attribute in 8 file(s): 195s $a.b 195s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 195s 195s dimension(s): 195s from to offset delta refsys point x/y 195s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 195s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 195s band 1 6 NA NA NA NA 195s foo 1 4 1 1 NA NA 195s bar 1 2 2001-01-01 365 days Date NA 195s > 195s BEGIN TEST sf.R 195s 195s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 195s Copyright (C) 2025 The R Foundation for Statistical Computing 195s Platform: x86_64-pc-linux-gnu 195s 195s R is free software and comes with ABSOLUTELY NO WARRANTY. 195s You are welcome to redistribute it under certain conditions. 195s Type 'license()' or 'licence()' for distribution details. 195s 195s R is a collaborative project with many contributors. 195s Type 'contributors()' for more information and 195s 'citation()' on how to cite R or R packages in publications. 195s 195s Type 'demo()' for some demos, 'help()' for on-line help, or 195s 'help.start()' for an HTML browser interface to help. 195s Type 'q()' to quit R. 195s 195s > suppressPackageStartupMessages(library(stars)) 196s > library(sf) 196s > #jp2 = system.file("jp2/B01.jp2", package = "stars") 196s > #(x = read_stars(jp2, options = c("OVERVIEW_LEVEL=3"))) 196s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 196s > #(x = read_stars(tif, options = c("OVERVIEW_LEVEL=3"))) # FIXME: breaks on windows 196s > (x = read_stars(tif)[,1:20,1:20]) 196s stars object with 3 dimensions and 1 attribute 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s L7_ETMs.tif 17 44 58 58.19667 70 130 196s dimension(s): 196s from to offset delta refsys point x/y 196s x 1 20 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 196s y 1 20 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 196s band 1 6 NA NA NA NA 196s > # names(x) = "L7_ETM" 196s > 196s > # library(abind) 196s > # x = adrop(x) 196s > image(x) 196s > (sfc = st_as_sfc(x, as_points = FALSE)) 196s Geometry set for 400 features 196s Geometry type: POLYGON 196s Dimension: XY 196s Bounding box: xmin: 288776.3 ymin: 9120191 xmax: 289346.3 ymax: 9120761 196s Projected CRS: SIRGAS 2000 / UTM zone 25S 196s First 5 geometries: 196s POLYGON ((288776.3 9120761, 288804.8 9120761, 2... 196s POLYGON ((288804.8 9120761, 288833.3 9120761, 2... 196s POLYGON ((288833.3 9120761, 288861.8 9120761, 2... 196s POLYGON ((288861.8 9120761, 288890.3 9120761, 2... 196s POLYGON ((288890.3 9120761, 288918.8 9120761, 2... 196s > plot(sfc, add =TRUE) 196s > (sfc = st_as_sfc(x, as_points = TRUE)) 196s Geometry set for 400 features 196s Geometry type: POINT 196s Dimension: XY 196s Bounding box: xmin: 288790.5 ymin: 9120205 xmax: 289332 ymax: 9120747 196s Projected CRS: SIRGAS 2000 / UTM zone 25S 196s First 5 geometries: 196s POINT (288790.5 9120747) 196s POINT (288819 9120747) 196s POINT (288847.5 9120747) 196s > plot(sfc, add = TRUE) 196s > 196s > sf = st_as_sf(x, as_points = FALSE) 196s > plot(sf, border = NA) 196s POINT (288876 9120747) 196s POINT (288904.5 9120747) 196s > sf = st_as_sf(x[,,,1], as_points = FALSE, merge = TRUE) 196s Warning message: 196s In CPL_polygonize(file, mask_name, "GTiff", "Memory", "foo", options, : 196s GDAL Message 1: DeprecationWarning: 'Memory' driver is deprecated since GDAL 3.11. Use 'MEM' onwards. Further messages of this type will be suppressed. 196s > plot(sf, border = NA) 196s > 196s > sfc1 <- st_as_sfc(x, as_points = TRUE, use_cpp = TRUE, na.rm = FALSE) 196s > sfc2 <- st_as_sfc(x, as_points = TRUE, use_cpp = FALSE) 196s > identical(sfc1, sfc2) 196s [1] TRUE 196s > 196s > sfc1 <- st_as_sfc(x, as_points = FALSE, use_cpp = TRUE, na.rm = FALSE) 196s > sfc2 <- st_as_sfc(x, as_points = FALSE, use_cpp = FALSE) 196s > identical(sfc1, sfc2) 196s [1] TRUE 196s > 196s > # sf -> stars -> sf 196s > x = st_sfc(st_point(0:1), st_point(1:2), st_point(2:3)) 196s > m = matrix(1:9,3) 196s > colnames(m) = c("a", "b", "c") 196s > foo = st_sf(m, geom = x) 196s > x = st_as_stars(foo) 196s > c(x) 196s stars object with 1 dimensions and 3 attributes 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s a 1 1.5 2 2 2.5 3 196s b 4 4.5 5 5 5.5 6 196s c 7 7.5 8 8 8.5 9 196s dimension(s): 196s from to point values 196s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 196s > st_redimension(x) 196s stars object with 2 dimensions and 1 attribute 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s a.b.c 1 3 5 5 7 9 196s dimension(s): 196s from to point values 196s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 196s new_dim 1 3 NA a, b, c 196s > c(x, x) 196s stars object with 1 dimensions and 6 attributes 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s a 1 1.5 2 2 2.5 3 196s b 4 4.5 5 5 5.5 6 196s c 7 7.5 8 8 8.5 9 196s a.1 1 1.5 2 2 2.5 3 196s b.1 4 4.5 5 5 5.5 6 196s c.1 7 7.5 8 8 8.5 9 196s dimension(s): 196s from to point values 196s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 196s > (y = st_redimension(x, along = list(time = as.Date("2017-11-27") + 0:2))) 196s stars object with 2 dimensions and 1 attribute 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s a.b.c 1 3 5 5 7 9 196s dimension(s): 196s from to offset delta refsys point values 196s geom 1 3 NA NA NA TRUE POINT (0 1),...,POINT (2 3) 196s time 1 3 2017-11-27 1 days Date NA NULL 196s > st_as_sf(y) 196s Simple feature collection with 3 features and 3 fields 196s Geometry type: POINT 196s Dimension: XY 196s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 196s CRS: NA 196s 2017-11-27 2017-11-28 2017-11-29 geom 196s 1 1 4 7 POINT (0 1) 196s 2 2 5 8 POINT (1 2) 196s 3 3 6 9 POINT (2 3) 196s > st_as_sf(st_as_stars(foo)) 196s Simple feature collection with 3 features and 3 fields 196s Geometry type: POINT 196s Dimension: XY 196s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 196s CRS: NA 196s a b c geom 196s 1 1 4 7 POINT (0 1) 196s 2 2 5 8 POINT (1 2) 196s 3 3 6 9 POINT (2 3) 196s > 196s > c(x,x,along=1) # NEEDS FIXING! 196s stars object with 1 dimensions and 3 attributes 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s a 1 1.25 2 2 2.75 3 196s b 4 4.25 5 5 5.75 6 196s c 7 7.25 8 8 8.75 9 196s dimension(s): 196s from to point values 196s geom 1 6 TRUE POINT (0 1),...,POINT (2 3) 196s > # st_as_stars.sfc 196s > st_as_stars(st_geometry(st_as_sf(y)), nx = 10, ny = 10, as_points = FALSE) 196s stars object with 2 dimensions and 1 attribute 196s attribute(s): 196s Min. 1st Qu. Median Mean 3rd Qu. Max. 196s values 0 0 0 0.06 0 1 196s dimension(s): 196s from to offset delta x/y 196s x 1 10 0 0.2 [x] 196s y 1 10 3 -0.2 [y] 196s > 196s BEGIN TEST sp.R 196s 196s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 196s Copyright (C) 2025 The R Foundation for Statistical Computing 196s Platform: x86_64-pc-linux-gnu 196s 196s R is free software and comes with ABSOLUTELY NO WARRANTY. 196s You are welcome to redistribute it under certain conditions. 196s Type 'license()' or 'licence()' for distribution details. 196s 196s R is a collaborative project with many contributors. 196s Type 'contributors()' for more information and 196s 'citation()' on how to cite R or R packages in publications. 196s 196s Type 'demo()' for some demos, 'help()' for on-line help, or 196s 'help.start()' for an HTML browser interface to help. 196s Type 'q()' to quit R. 196s 196s > options(rgdal_show_exportToProj4_warnings = "none") 196s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE))) { 196s + demo(meuse) 196s + # remove +init=xxx 196s + meuse@proj4string = CRS( 196s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 196s + ) 196s + meuse.grid@proj4string = CRS( 196s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 196s + ) 196s + 196s + suppressPackageStartupMessages(library(stars)) 196s + (m = st_as_stars(meuse)) 196s + (gr = st_as_stars(meuse.grid)) 196s + 196s + m2 = as(m, "Spatial") 196s + summary(m2) 196s + gr2 = as(gr, "Spatial") 196s + summary(gr2) 196s + 196s + all.equal(meuse, m2, check.attributes = FALSE) 196s + fullgrid(meuse.grid) = TRUE 196s + all.equal(meuse.grid, gr2, check.attributes = FALSE) 196s + 196s + #all.equal(meuse, m2) 196s + #all.equal(meuse.grid, gr2) 196s + } 196s 196s 196s demo(meuse) 196s ---- ~~~~~ 196s 196s > require(sp) 196s 196s > crs = CRS("EPSG:28992") 197s 197s > data("meuse") 197s 197s > coordinates(meuse) <- ~x+y 197s 197s > proj4string(meuse) <- crs 197s 197s > data("meuse.grid") 197s 197s > coordinates(meuse.grid) <- ~x+y 197s 197s > gridded(meuse.grid) <- TRUE 197s 197s > proj4string(meuse.grid) <- crs 197s 197s > data("meuse.riv") 197s 197s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv"))) 197s 197s > proj4string(meuse.riv) <- crs 197s 197s > data("meuse.area") 197s 197s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area"))) 197s 197s > proj4string(meuse.area) <- crs 197s [1] TRUE 197s > 197s BEGIN TEST spacetime.R 197s 197s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 197s Copyright (C) 2025 The R Foundation for Statistical Computing 197s Platform: x86_64-pc-linux-gnu 197s 197s R is free software and comes with ABSOLUTELY NO WARRANTY. 197s You are welcome to redistribute it under certain conditions. 197s Type 'license()' or 'licence()' for distribution details. 197s 197s R is a collaborative project with many contributors. 197s Type 'contributors()' for more information and 197s 'citation()' on how to cite R or R packages in publications. 197s 197s Type 'demo()' for some demos, 'help()' for on-line help, or 197s 'help.start()' for an HTML browser interface to help. 197s Type 'q()' to quit R. 197s 197s > suppressPackageStartupMessages(library(stars)) 197s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 197s + set.seed(1331) 197s + Sys.setenv(TZ="UTC") 197s + example(STFDF) 197s + 197s + x = st_as_stars(stfdf) 197s + xx = as(x, "STFDF") 197s + 197s + # as.xts.stars: 197s + library(xts) 197s + xts = as.xts(x) 197s + st_as_stars(xts) 197s + st_as_stars(xts, dimensions = st_dimensions(x)) 197s + 197s + library(sp) 197s + pts = SpatialPoints(rbind(c(0,0), c(0,1), c(1,0), c(1,1))) 197s + gridded(pts) = TRUE 197s + 197s + tm = xts(1:10, as.Date("2010-01-01")+0:9) 197s + stfdf = STFDF(pts, tm, data.frame(foo = seq_len(length(pts) * length(tm)))) 197s + x = st_as_stars(stfdf) 197s + xx = as(x, "STFDF") 197s + 197s + x = st_as_stars(as(stfdf, "STSDF")) 197s + } 197s 197s STFDF> sp = cbind(x = c(0,0,1), y = c(0,1,1)) 197s 197s STFDF> row.names(sp) = paste("point", 1:nrow(sp), sep="") 197s 197s STFDF> library(sp) 197s 197s STFDF> sp = SpatialPoints(sp) 197s 197s STFDF> time = as.POSIXct("2010-08-05")+3600*(10:13) 197s 197s STFDF> m = c(10,20,30) # means for each of the 3 point locations 197s 197s STFDF> mydata = rnorm(length(sp)*length(time),mean=rep(m, 4)) 197s 197s STFDF> IDs = paste("ID",1:length(mydata)) 197s 197s STFDF> mydata = data.frame(values = signif(mydata,3), ID=IDs) 197s 197s STFDF> stfdf = STFDF(sp, time, mydata) 197s 197s STFDF> stfdf 197s An object of class "STFDF" 197s Slot "data": 197s values ID 197s 1 9.38 ID 1 197s 2 21.10 ID 2 197s 3 29.80 ID 3 197s 4 11.50 ID 4 197s 5 19.80 ID 5 197s 6 31.20 ID 6 197s 7 10.40 ID 7 197s 8 20.50 ID 8 197s 9 29.80 ID 9 197s 10 10.30 ID 10 197s 11 21.40 ID 11 197s 12 29.40 ID 12 197s 197s Slot "sp": 197s SpatialPoints: 197s x y 197s point1 0 0 197s point2 0 1 197s point3 1 1 197s Coordinate Reference System (CRS) arguments: NA 197s 197s Slot "time": 197s timeIndex 197s 2010-08-05 10:00:00 1 197s 2010-08-05 11:00:00 2 197s 2010-08-05 12:00:00 3 197s 2010-08-05 13:00:00 4 197s 197s Slot "endTime": 197s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 197s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 197s 197s 197s STFDF> stfdf[1:2,] 197s An object of class "STFDF" 197s Slot "data": 197s values ID 197s 1 9.38 ID 1 197s 2 21.10 ID 2 197s 3 11.50 ID 4 197s 4 19.80 ID 5 197s 5 10.40 ID 7 197s 6 20.50 ID 8 197s 7 10.30 ID 10 197s 8 21.40 ID 11 197s 197s Slot "sp": 197s SpatialPoints: 197s x y 197s point1 0 0 197s point2 0 1 197s Coordinate Reference System (CRS) arguments: NA 197s 197s Slot "time": 197s timeIndex 197s 2010-08-05 10:00:00 1 197s 2010-08-05 11:00:00 2 197s 2010-08-05 12:00:00 3 197s 2010-08-05 13:00:00 4 197s 197s Slot "endTime": 197s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 197s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 197s 197s 197s STFDF> stfdf[,1:2] 197s An object of class "STFDF" 197s Slot "data": 197s values ID 197s 1 9.38 ID 1 197s 2 21.10 ID 2 197s 3 29.80 ID 3 197s 4 11.50 ID 4 197s 5 19.80 ID 5 197s 6 31.20 ID 6 197s 197s Slot "sp": 197s SpatialPoints: 197s x y 197s point1 0 0 197s point2 0 1 197s point3 1 1 197s Coordinate Reference System (CRS) arguments: NA 197s 197s Slot "time": 197s timeIndex 197s 2010-08-05 10:00:00 1 197s 2010-08-05 11:00:00 2 197s 197s Slot "endTime": 197s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 197s 197s 197s STFDF> stfdf[,,2] 197s An object of class "STFDF" 197s Slot "data": 197s ID 197s 1 ID 1 197s 2 ID 2 197s 3 ID 3 197s 4 ID 4 197s 5 ID 5 197s 6 ID 6 197s 7 ID 7 197s 8 ID 8 197s 9 ID 9 197s 10 ID 10 197s 11 ID 11 197s 12 ID 12 197s 197s Slot "sp": 197s SpatialPoints: 197s x y 197s point1 0 0 197s point2 0 1 197s point3 1 1 197s Coordinate Reference System (CRS) arguments: NA 197s 197s Slot "time": 197s timeIndex 197s 2010-08-05 10:00:00 1 197s 2010-08-05 11:00:00 2 197s 2010-08-05 12:00:00 3 197s 2010-08-05 13:00:00 4 197s 197s Slot "endTime": 197s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 197s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 197s 197s 197s STFDF> stfdf[,,"values"] 197s An object of class "STFDF" 197s Slot "data": 197s values 197s 1 9.38 197s 2 21.10 197s 3 29.80 197s 4 11.50 197s 5 19.80 197s 6 31.20 197s 7 10.40 197s 8 20.50 197s 9 29.80 197s 10 10.30 197s 11 21.40 197s 12 29.40 197s 197s Slot "sp": 197s SpatialPoints: 197s x y 197s point1 0 0 197s point2 0 1 197s point3 1 1 197s Coordinate Reference System (CRS) arguments: NA 197s 197s Slot "time": 197s timeIndex 197s 2010-08-05 10:00:00 1 197s 2010-08-05 11:00:00 2 197s 2010-08-05 12:00:00 3 197s 2010-08-05 13:00:00 4 197s 197s Slot "endTime": 197s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 197s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 197s 197s 197s STFDF> stfdf[1,] 197s values ID timeIndex 197s 2010-08-05 10:00:00 9.38 ID 1 1 197s 2010-08-05 11:00:00 11.50 ID 4 2 197s 2010-08-05 12:00:00 10.40 ID 7 3 197s 2010-08-05 13:00:00 10.30 ID 10 4 197s 197s STFDF> stfdf[,2] 197s coordinates values ID 197s 1 (0, 0) 11.5 ID 4 197s 2 (0, 1) 19.8 ID 5 197s 3 (1, 1) 31.2 ID 6 197s 197s STFDF> as(stfdf[,,1], "xts") 197s point1 point2 point3 197s 2010-08-05 10:00:00 9.38 21.1 29.8 197s 2010-08-05 11:00:00 11.50 19.8 31.2 197s 2010-08-05 12:00:00 10.40 20.5 29.8 197s 2010-08-05 13:00:00 10.30 21.4 29.4 197s 197s STFDF> as(stfdf[,,2], "xts") 197s point1 point2 point3 197s 2010-08-05 10:00:00 ID 1 ID 2 ID 3 197s 2010-08-05 11:00:00 ID 4 ID 5 ID 6 197s 2010-08-05 12:00:00 ID 7 ID 8 ID 9 197s 2010-08-05 13:00:00 ID 10 ID 11 ID 12 197s 197s STFDF> # examples for [[, [[<-, $ and $<- 197s STFDF> stfdf[[1]] 197s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 197s 197s STFDF> stfdf[["values"]] 197s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 197s 197s STFDF> stfdf[["newVal"]] <- rnorm(12) 198s 198s STFDF> stfdf$ID 198s [1] "ID 1" "ID 2" "ID 3" "ID 4" "ID 5" "ID 6" "ID 7" "ID 8" "ID 9" 198s [10] "ID 10" "ID 11" "ID 12" 198s 198s STFDF> stfdf$ID = paste("OldIDs", 1:12, sep="") 198s 198s STFDF> stfdf$NewID = paste("NewIDs", 12:1, sep="") 198s 198s STFDF> stfdf 198s An object of class "STFDF" 198s Slot "data": 198s values ID newVal NewID 198s 1 9.38 OldIDs1 -0.3125824 NewIDs12 198s 2 21.10 OldIDs2 -1.0536246 NewIDs11 198s 3 29.80 OldIDs3 -0.7188880 NewIDs10 198s 4 11.50 OldIDs4 -1.0525404 NewIDs9 198s 5 19.80 OldIDs5 -0.8441413 NewIDs8 198s 6 31.20 OldIDs6 1.1420848 NewIDs7 198s 7 10.40 OldIDs7 1.9479070 NewIDs6 198s 8 20.50 OldIDs8 -0.4512836 NewIDs5 198s 9 29.80 OldIDs9 0.6695716 NewIDs4 198s 10 10.30 OldIDs10 0.1269003 NewIDs3 198s 11 21.40 OldIDs11 -0.7273297 NewIDs2 198s 12 29.40 OldIDs12 -0.8151803 NewIDs1 198s 198s Slot "sp": 198s SpatialPoints: 198s x y 198s point1 0 0 198s point2 0 1 198s point3 1 1 198s Coordinate Reference System (CRS) arguments: NA 198s 198s Slot "time": 198s timeIndex 198s 2010-08-05 10:00:00 1 198s 2010-08-05 11:00:00 2 198s 2010-08-05 12:00:00 3 198s 2010-08-05 13:00:00 4 198s 198s Slot "endTime": 198s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 198s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 198s 198s 198s STFDF> x = stfdf[stfdf[1:2,],] 198s 198s STFDF> all.equal(x, stfdf[1:2,]) 198s [1] TRUE 198s 198s STFDF> all.equal(stfdf, stfdf[stfdf,]) # converts character to factor... 198s [1] TRUE 198s Loading required package: zoo 198s 198s Attaching package: 'zoo' 198s 198s The following objects are masked from 'package:base': 198s 198s as.Date, as.Date.numeric 198s 198s only the first attribute will used; maybe use merge() first? 198s > 198s BEGIN TEST spatstat.R 198s 198s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 198s Copyright (C) 2025 The R Foundation for Statistical Computing 198s Platform: x86_64-pc-linux-gnu 198s 198s R is free software and comes with ABSOLUTELY NO WARRANTY. 198s You are welcome to redistribute it under certain conditions. 198s Type 'license()' or 'licence()' for distribution details. 198s 198s R is a collaborative project with many contributors. 198s Type 'contributors()' for more information and 198s 'citation()' on how to cite R or R packages in publications. 198s 198s Type 'demo()' for some demos, 'help()' for on-line help, or 198s 'help.start()' for an HTML browser interface to help. 198s Type 'q()' to quit R. 198s 198s > suppressPackageStartupMessages(library(sf)) 198s > 198s > library(stars) 198s Loading required package: abind 198s > if (suppressPackageStartupMessages(require(spatstat.geom, quietly = TRUE))) { 198s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 198s + s = adrop(read_stars(tif)[,,,1]) > 70 198s + plot(s) 198s + m = as.owin(s) 198s + plot(m) 198s + print(table(m$m)) 198s + } 199s 199s FALSE TRUE 199s 39494 83354 199s > 199s BEGIN TEST stars.R 199s 199s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 199s Copyright (C) 2025 The R Foundation for Statistical Computing 199s Platform: x86_64-pc-linux-gnu 199s 199s R is free software and comes with ABSOLUTELY NO WARRANTY. 199s You are welcome to redistribute it under certain conditions. 199s Type 'license()' or 'licence()' for distribution details. 199s 199s R is a collaborative project with many contributors. 199s Type 'contributors()' for more information and 199s 'citation()' on how to cite R or R packages in publications. 199s 199s Type 'demo()' for some demos, 'help()' for on-line help, or 199s 'help.start()' for an HTML browser interface to help. 199s Type 'q()' to quit R. 199s 199s > Sys.setenv(TZ="UTC") 199s > suppressPackageStartupMessages(library(stars)) 199s > set.seed(13521) # runif 199s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 199s > (x_ = read_stars(c(tif,tif))) # FIXME: not what you'd expect 199s stars object with 3 dimensions and 2 attributes 199s attribute(s): 199s Min. 1st Qu. Median Mean 3rd Qu. Max. 199s L7_ETMs.tif 1 54 69 68.91242 86 255 199s L7_ETMs.tif.1 1 54 69 68.91242 86 255 199s dimension(s): 199s from to offset delta refsys point x/y 199s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 199s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 199s band 1 6 NA NA NA NA 199s > (x = read_stars(tif)) 199s stars object with 3 dimensions and 1 attribute 199s attribute(s): 199s Min. 1st Qu. Median Mean 3rd Qu. Max. 199s L7_ETMs.tif 1 54 69 68.91242 86 255 199s dimension(s): 199s from to offset delta refsys point x/y 199s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 199s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 199s band 1 6 NA NA NA NA 199s > # image(x) 199s > gdal_crs(tif) 199s Coordinate Reference System: 199s User input: PROJCS["SIRGAS 2000 / UTM zone 25S",GEOGCS["SIRGAS 2000",DATUM["Sistema_de_Referencia_Geocentrico_para_las_AmericaS_2000",SPHEROID["GRS 1980",6378137,298.257222101,AUTHORITY["EPSG","7019"]],AUTHORITY["EPSG","6674"]],PRIMEM["Greenwich",0,AUTHORITY["EPSG","8901"]],UNIT["degree",0.0174532925199433,AUTHORITY["EPSG","9122"]],AUTHORITY["EPSG","4674"]],PROJECTION["Transverse_Mercator"],PARAMETER["latitude_of_origin",0],PARAMETER["central_meridian",-33],PARAMETER["scale_factor",0.9996],PARAMETER["false_easting",500000],PARAMETER["false_northing",10000000],UNIT["metre",1,AUTHORITY["EPSG","9001"]],AXIS["Easting",EAST],AXIS["Northing",NORTH],AUTHORITY["EPSG","31985"]] 199s wkt: 199s PROJCRS["SIRGAS 2000 / UTM zone 25S", 199s BASEGEOGCRS["SIRGAS 2000", 199s DATUM["Sistema de Referencia Geocentrico para las AmericaS 2000", 199s ELLIPSOID["GRS 1980",6378137,298.257222101, 199s LENGTHUNIT["metre",1]]], 199s PRIMEM["Greenwich",0, 199s ANGLEUNIT["degree",0.0174532925199433]], 199s ID["EPSG",4674]], 199s CONVERSION["UTM zone 25S", 199s METHOD["Transverse Mercator", 199s ID["EPSG",9807]], 199s PARAMETER["Latitude of natural origin",0, 199s ANGLEUNIT["degree",0.0174532925199433], 199s ID["EPSG",8801]], 199s PARAMETER["Longitude of natural origin",-33, 199s ANGLEUNIT["degree",0.0174532925199433], 199s ID["EPSG",8802]], 199s PARAMETER["Scale factor at natural origin",0.9996, 199s SCALEUNIT["unity",1], 199s ID["EPSG",8805]], 199s PARAMETER["False easting",500000, 199s LENGTHUNIT["metre",1], 199s ID["EPSG",8806]], 199s PARAMETER["False northing",10000000, 199s LENGTHUNIT["metre",1], 199s ID["EPSG",8807]]], 199s CS[Cartesian,2], 199s AXIS["easting",east, 199s ORDER[1], 199s LENGTHUNIT["metre",1]], 199s AXIS["northing",north, 199s ORDER[2], 199s LENGTHUNIT["metre",1]], 199s ID["EPSG",31985]] 199s > plot(x) 200s > plot(x, join_zlim = FALSE) 200s > x %>% st_set_dimensions(names = c('a', 'b', 'c')) 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 1 54 69 68.91242 86 255 200s dimension(s): 200s from to offset delta refsys point x/y 200s a 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 200s b 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 200s c 1 6 NA NA NA NA 200s > st_get_dimension_values(x, 3) 200s [1] 1 2 3 4 5 6 200s > 200s > (x1 = st_set_dimensions(x, "band", values = c(1,2,3,4,5,7), names = "band_number", point = TRUE)) 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 1 54 69 68.91242 86 255 200s dimension(s): 200s from to offset delta refsys point values x/y 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 200s band_number 1 6 NA NA NA TRUE 1,...,7 200s > rbind(c(0.45,0.515), c(0.525,0.605), c(0.63,0.69), c(0.775,0.90), c(1.55,1.75), c(2.08,2.35)) %>% 200s + units::set_units(um) -> bw # units::set_units(µm) -> bw 200s > # set bandwidth midpoint: 200s > (x2 = st_set_dimensions(x, "band", values = 0.5 * (bw[,1]+bw[,2]), 200s + names = "bandwidth_midpoint", point = TRUE)) 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 1 54 69 68.91242 86 255 200s dimension(s): 200s from to offset delta refsys point 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 200s bandwidth_midpoint 1 6 NA NA udunits TRUE 200s values x/y 200s x NULL [x] 200s y NULL [y] 200s bandwidth_midpoint 0.4825 [um],...,2.215 [um] 200s > # set bandwidth intervals: 200s > (x3 = st_set_dimensions(x, "band", values = make_intervals(bw), names = "bandwidth")) 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 1 54 69 68.91242 86 255 200s dimension(s): 200s from to offset delta refsys point 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 200s bandwidth 1 6 NA NA udunits NA 200s values x/y 200s x NULL [x] 200s y NULL [y] 200s bandwidth [0.45,0.515) [um],...,[2.08,2.35) [um] 200s > 200s > x + x 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 2 108 138 137.8248 172 510 200s dimension(s): 200s from to offset delta refsys point x/y 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 200s band 1 6 NA NA NA NA 200s > x * x 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 1 2916 4761 5512.41 7396 65025 200s dimension(s): 200s from to offset delta refsys point x/y 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 200s band 1 6 NA NA NA NA 200s > x[,,,1:3] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 21 58 70 70.36041 83 255 200s dimension(s): 200s from to offset delta refsys point x/y 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 200s band 1 3 NA NA NA NA 200s > x[,1:100,100:200,] 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 13 54 65 67.21531 77 252 200s dimension(s): 200s from to offset delta refsys point x/y 200s x 1 100 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 200s y 100 200 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 200s band 1 6 NA NA NA NA 200s > sqrt(x) 200s stars object with 3 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s L7_ETMs.tif 1 7.348469 8.306624 8.094006 9.273618 15.96872 200s dimension(s): 200s from to offset delta refsys point x/y 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 200s band 1 6 NA NA NA NA 200s > st_apply(x, 3, min) 200s stars object with 1 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s min 1 3 15 18.5 29.25 47 200s dimension(s): 200s from to 200s band 1 6 200s > st_apply(x, 1:2, max) 200s stars object with 2 dimensions and 1 attribute 200s attribute(s): 200s Min. 1st Qu. Median Mean 3rd Qu. Max. 200s max 55 85 96 99.36018 113 255 200s dimension(s): 200s from to offset delta refsys point x/y 200s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 200s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 200s > st_apply(x, 1:2, range) 201s stars object with 3 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s L7_ETMs.tif 1 50 71 72.43565 96 255 201s dimension(s): 201s from to offset delta refsys point x/y 201s range 1 2 NA NA NA NA 201s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 201s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 201s > 201s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 201s > x = read_stars(geomatrix) 201s > y = st_transform(x, st_crs(4326)) 201s > st_coordinates(x)[1:2,] 201s x y 201s 1 1841000 1144000 201s 2 1841002 1143995 201s > 201s > nc = system.file("nc/tos_O1_2001-2002.nc", package = "stars") 201s > if (nc != "") { 201s + print(x <- read_stars(nc)) 201s + print(st_bbox(x)) 201s + s = st_as_stars(st_bbox(x)) # inside = NA 201s + print(st_bbox(s)) 201s + s = st_as_stars(st_bbox(x), inside = TRUE) 201s + print(st_bbox(s)) 201s + s = st_as_stars(st_bbox(x), inside = FALSE) 201s + print(st_bbox(s)) 201s + (s = st_as_stars(st_bbox(x), dy = 1)) 201s + print(st_bbox(s)) 201s + print(identical(st_as_stars(st_bbox(x), dx = 1), st_as_stars(st_bbox(x), dy = 1))) 201s + s = st_as_stars(st_bbox(x), dx = 10) 201s + print(st_bbox(s)) 201s + s = st_as_stars(st_bbox(x), dx = 20) 201s + print(st_bbox(s)) 201s + x1 = x 201s + st_crs(x1) = "OGC:CRS84" 201s + print(identical(st_as_stars(st_bbox(x1), dx = 1), st_as_stars(st_bbox(x1), dx = units::set_units(1, degree)))) 201s + 201s + df = as.data.frame(x) 201s + if (require(units, quietly = TRUE)) 201s + print(units::drop_units(x)) 201s + 201s + print(dimnames(x)) 201s + dimnames(x) <- letters[1:3] 201s + print(dimnames(x)) 201s + } # CFtime 201s > 201s > st_as_stars() 201s stars object with 2 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s values 0 0 0 0 0 0 201s dimension(s): 201s from to offset delta refsys x/y 201s x 1 360 -180 1 WGS 84 (CRS84) [x] 201s y 1 180 90 -1 WGS 84 (CRS84) [y] 201s > 201s > # multiple sub-datasets: 201s > nc_red = system.file("nc/reduced.nc", package = "stars") 201s > red = read_stars(nc_red) 201s sst, anom, err, ice, 201s > red 201s stars object with 4 dimensions and 4 attributes 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 201s sst [degree_Celsius] -1.80 -0.03 13.655 12.9940841 24.8125 32.97 4448 201s anom [degree_Celsius] -10.16 -0.58 -0.080 -0.1855812 0.2100 2.99 4448 201s err [degree_Celsius] 0.11 0.16 0.270 0.2626872 0.3200 0.84 4448 201s ice [percent] 0.01 0.47 0.920 0.7178118 0.9600 1.00 13266 201s dimension(s): 201s from to offset delta refsys x/y 201s x 1 180 -1 2 NA [x] 201s y 1 90 90 -2 NA [y] 201s zlev 1 1 0 [m] NA udunits 201s time 1 1 1981-12-31 NA Date 201s > plot(red) 201s > 201s > x = st_xy2sfc(read_stars(tif)[,1:10,1:10,], as_points = FALSE) 201s > st_bbox(x) 201s xmin ymin xmax ymax 201s 288776.3 9120475.8 289061.3 9120760.8 201s > x = read_stars(tif) 201s > merge(split(x, "band")) 201s stars object with 3 dimensions and 1 attribute 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s X1.X2.X3.X4.X5.X6 1 54 69 68.91242 86 255 201s dimension(s): 201s from to offset delta refsys point values 201s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 201s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 201s attributes 1 6 NA NA NA NA X1,...,X6 201s x/y 201s x [x] 201s y [y] 201s attributes 201s > 201s > read_stars(c(tif,tif)) # merges as attributes 201s stars object with 3 dimensions and 2 attributes 201s attribute(s): 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s L7_ETMs.tif 1 54 69 68.91242 86 255 201s L7_ETMs.tif.1 1 54 69 68.91242 86 255 201s dimension(s): 201s from to offset delta refsys point x/y 201s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 201s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 201s band 1 6 NA NA NA NA 201s > read_stars(c(tif,tif), along = "sensor") 201s stars object with 4 dimensions and 1 attribute 201s attribute(s), summary of first 1e+05 cells: 201s Min. 1st Qu. Median Mean 3rd Qu. Max. 201s L7_ETMs.tif 47 65 76 77.3419 87 255 201s dimension(s): 201s from to offset delta refsys point x/y 201s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 201s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 201s band 1 6 NA NA NA NA 201s sensor 1 2 NA NA NA NA 201s > read_stars(c(tif,tif), along = 4) 202s stars object with 4 dimensions and 1 attribute 202s attribute(s), summary of first 1e+05 cells: 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 47 65 76 77.3419 87 255 202s dimension(s): 202s from to offset delta refsys point x/y 202s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 202s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 202s band 1 6 NA NA NA NA 202s new_dim 1 2 NA NA NA NA 202s > read_stars(c(tif,tif), along = "band") 202s stars object with 3 dimensions and 1 attribute 202s attribute(s), summary of first 1e+05 cells: 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 47 65 76 77.3419 87 255 202s dimension(s): 202s from to offset delta refsys point x/y 202s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 202s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 202s band 1 12 NA NA NA NA 202s > read_stars(c(tif,tif), along = 3) 202s stars object with 3 dimensions and 1 attribute 202s attribute(s), summary of first 1e+05 cells: 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 47 65 76 77.3419 87 255 202s dimension(s): 202s from to offset delta refsys point x/y 202s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 202s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 202s band 1 12 NA NA NA NA 202s > 202s > # cut: 202s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 202s > x = read_stars(tif) 202s > cut(x, c(0, 50, 100, 255)) 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s L7_ETMs.tif 202s (0,50] :156060 202s (50,100] :503764 202s (100,255]: 77264 202s dimension(s): 202s from to offset delta refsys point x/y 202s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 202s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 202s band 1 6 NA NA NA NA 202s > cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255)) 202s stars object with 2 dimensions and 1 attribute 202s attribute(s): 202s L7_ETMs.tif 202s (0,50] : 1 202s (50,100] :117134 202s (100,255]: 5713 202s dimension(s): 202s from to offset delta refsys point x/y 202s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 202s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 202s > plot(cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255))) 202s > 202s > st_bbox(st_dimensions(x)) 202s xmin ymin xmax ymax 202s 288776.3 9110728.8 298722.8 9120760.8 202s > x[x < 0] = NA 202s > x[is.na(x)] = 0 202s > 202s > # c: 202s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 202s > if (FALSE && f != "") { 202s + files = c("avhrr-only-v2.19810901.nc", 202s + "avhrr-only-v2.19810902.nc", 202s + "avhrr-only-v2.19810903.nc", 202s + "avhrr-only-v2.19810904.nc", 202s + "avhrr-only-v2.19810905.nc", 202s + "avhrr-only-v2.19810906.nc", 202s + "avhrr-only-v2.19810907.nc", 202s + "avhrr-only-v2.19810908.nc", 202s + "avhrr-only-v2.19810909.nc") 202s + l = list() 202s + for (f in files) { 202s + from = system.file(paste0("netcdf/", f), package = "starsdata") 202s + l[[f]] = read_stars(from, sub = c("sst", "anom")) 202s + } 202s + ret = do.call(c, l) 202s + print(ret) 202s + ret = adrop(c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 202s + print(ret) 202s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 202s + #print(ret) 202s + } 202s > 202s > st_dimensions(list(matrix(1, 4, 4))) # st_dimensions.default 202s from to point values 202s X1 1 1 FALSE 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 202s > 202s > if (FALSE && require("starsdata", quietly = TRUE)) { 202s + # curvilinear: 202s + s5p = system.file( 202s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 202s + package = "starsdata") 202s + print(s5p) 202s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 202s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 202s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 202s + lat = read_stars(lat_ds) 202s + lon = read_stars(lon_ds) 202s + nit = read_stars(nit_ds) 202s + nit[[1]][nit[[1]] > 9e+36] = NA 202s + 202s + ll = setNames(c(lon, lat), c("x", "y")) 202s + nit.c = st_as_stars(nit, curvilinear = ll) 202s + print(nit.c) 202s + 202s + s5p = system.file( 202s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 202s + package = "starsdata") 202s + nit.c2 = read_stars(s5p, 202s + sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 202s + curvilinear = c("//PRODUCT/latitude", "//PRODUCT/longitude")) 202s + print(all.equal(nit.c, nit.c2)) 202s + } 202s > 202s BEGIN TEST subset.R 202s 202s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 202s Copyright (C) 2025 The R Foundation for Statistical Computing 202s Platform: x86_64-pc-linux-gnu 202s 202s R is free software and comes with ABSOLUTELY NO WARRANTY. 202s You are welcome to redistribute it under certain conditions. 202s Type 'license()' or 'licence()' for distribution details. 202s 202s R is a collaborative project with many contributors. 202s Type 'contributors()' for more information and 202s 'citation()' on how to cite R or R packages in publications. 202s 202s Type 'demo()' for some demos, 'help()' for on-line help, or 202s 'help.start()' for an HTML browser interface to help. 202s Type 'q()' to quit R. 202s 202s > suppressPackageStartupMessages(library(stars)) 202s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 202s > x = read_stars(tif) 202s > y = st_set_dimensions(x, "band", point = TRUE) 202s > y[,1:10, 1:10, c(1,4,3,2)] 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 25 45 57 56.535 64 97 202s dimension(s): 202s from to offset delta refsys point values x/y 202s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 202s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 202s band 1 4 NA NA NA TRUE 1,...,2 202s > y = st_set_dimensions(x, "band", point = NA) 202s > y[,1:10, 1:10, c(1,4,3,2)] 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 25 45 57 56.535 64 97 202s dimension(s): 202s from to offset delta refsys point values x/y 202s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 202s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 202s band 1 4 NA NA NA NA [1,2),...,[2,3) 202s > y = st_set_dimensions(x, "band", point = FALSE) 202s > y[,1:10, 1:10, c(1,4,3,2)] 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 25 45 57 56.535 64 97 202s dimension(s): 202s from to offset delta refsys point values x/y 202s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 202s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 202s band 1 4 NA NA NA FALSE [1,2),...,[2,3) 202s > y = st_set_dimensions(x, "band", values = letters[1:6]) 202s > y[,1:10, 1:10, c(1,4,3,2)] 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 25 45 57 56.535 64 97 202s dimension(s): 202s from to offset delta refsys point values x/y 202s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 202s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 202s band 1 4 NA NA NA NA a,...,b 202s > y = st_set_dimensions(x, "band", values = letters[1:6], point = NA) 202s > y[,1:10, 1:10, c(1,4,3,2)] 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 25 45 57 56.535 64 97 202s dimension(s): 202s from to offset delta refsys point values x/y 202s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 202s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 202s band 1 4 NA NA NA NA a,...,b 202s > y = st_set_dimensions(x, "band", values = letters[1:6], point = TRUE) 202s > y[,1:10, 1:10, c(1,4,3,2)] 202s stars object with 3 dimensions and 1 attribute 202s attribute(s): 202s Min. 1st Qu. Median Mean 3rd Qu. Max. 202s L7_ETMs.tif 25 45 57 56.535 64 97 202s dimension(s): 202s from to offset delta refsys point values x/y 202s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 202s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 202s band 1 4 NA NA NA TRUE a,...,b 202s > 202s BEGIN TEST testthat.R 202s 202s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 202s Copyright (C) 2025 The R Foundation for Statistical Computing 202s Platform: x86_64-pc-linux-gnu 202s 202s R is free software and comes with ABSOLUTELY NO WARRANTY. 202s You are welcome to redistribute it under certain conditions. 202s Type 'license()' or 'licence()' for distribution details. 202s 202s R is a collaborative project with many contributors. 202s Type 'contributors()' for more information and 202s 'citation()' on how to cite R or R packages in publications. 202s 202s Type 'demo()' for some demos, 'help()' for on-line help, or 202s 'help.start()' for an HTML browser interface to help. 202s Type 'q()' to quit R. 202s 203s > ## load dependencies 203s > library(testthat) 203s > suppressPackageStartupMessages(library(stars)) 203s > 203s > ## test package 203s > test_check("stars") 206s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 206s 206s == Skipped tests (5) =========================================================== 207s * On CRAN (4): 'test-OpenStreetMap.R:2:3', 'test-ncdf.R:1:1', 207s 'test-ncproxy.R:1:1', 'test-rectilinear.R:89:3' 207s * {cubble} is not installed (1): 'test-cubble.R:2:3' 207s 207s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 207s > 207s BEGIN TEST tidy.R 207s 207s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 207s Copyright (C) 2025 The R Foundation for Statistical Computing 207s Platform: x86_64-pc-linux-gnu 207s 207s R is free software and comes with ABSOLUTELY NO WARRANTY. 207s You are welcome to redistribute it under certain conditions. 207s Type 'license()' or 'licence()' for distribution details. 207s 207s R is a collaborative project with many contributors. 207s Type 'contributors()' for more information and 207s 'citation()' on how to cite R or R packages in publications. 207s 207s Type 'demo()' for some demos, 'help()' for on-line help, or 207s 'help.start()' for an HTML browser interface to help. 207s Type 'q()' to quit R. 207s 207s > suppressPackageStartupMessages(library(stars)) 207s > 207s > if (require(dplyr, quietly = TRUE)) { 207s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 207s + x <- read_stars(tif) 207s + (y <- x %>% select(L7_ETMs.tif)) 207s + (y <- x %>% filter(band > 2)) 207s + (z <- x %>% mutate(foo = 2* L7_ETMs.tif)) 207s + x %>% pull(L7_ETMs.tif) %>% class() 207s + x %>% filter(x > 289900) 207s + x %>% slice("x", 50:100) 207s + 207s + suppressPackageStartupMessages(library(ggplot2)) 207s + ggplot() + geom_stars(data = x) + coord_equal() + facet_wrap(~band) 207s + ggplot() + geom_stars(data = x[,c(1:50,52:100),c(1:45, 50:60)]) + 207s + coord_equal() 207s + ggplot() + geom_stars(data = x[,1:10,1:10,1:2], sf = TRUE) + facet_wrap(~band) 207s + 207s + 207s + # see https://github.com/r-spatial/stars/issues/539 : 207s + x <- read_stars(system.file("tif/L7_ETMs.tif", package = "stars")) 207s + y <- transmute(x, L7_ETMs.tif = units::set_units(L7_ETMs.tif, degree_C)) # same as x but with units 207s + 207s + x - slice(x, 'band', 1) # runs as expected, recycling the second object 207s + try(y - slice(x, 'band', 1)) # fails as expected because x is unitless 207s + try(x - slice(y, 'band', 1)) # fails as expected 207s + y - slice(y, 'band', 1) # runs as expected 207s + } 207s 207s Attaching package: 'dplyr' 207s 207s The following objects are masked from 'package:stats': 207s 207s filter, lag 207s 207s The following objects are masked from 'package:base': 207s 207s intersect, setdiff, setequal, union 207s 208s Error in Ops.units(X[[i]], ...) : 208s both operands of the expression should be "units" objects 208s Error in Ops.units(X[[i]], ...) : 208s both operands of the expression should be "units" objects 208s stars object with 3 dimensions and 1 attribute 208s attribute(s): 208s Min. 1st Qu. Median Mean 3rd Qu. Max. 208s L7_ETMs.tif [degree_Celsius] -184 -19 -8 -10.2353 0 131 208s dimension(s): 208s from to offset delta refsys point x/y 208s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 208s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 208s band 1 6 NA NA NA NA 208s > 208s BEGIN TEST transform.R 208s 208s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 208s Copyright (C) 2025 The R Foundation for Statistical Computing 208s Platform: x86_64-pc-linux-gnu 208s 208s R is free software and comes with ABSOLUTELY NO WARRANTY. 208s You are welcome to redistribute it under certain conditions. 208s Type 'license()' or 'licence()' for distribution details. 208s 208s R is a collaborative project with many contributors. 208s Type 'contributors()' for more information and 208s 'citation()' on how to cite R or R packages in publications. 208s 208s Type 'demo()' for some demos, 'help()' for on-line help, or 208s 'help.start()' for an HTML browser interface to help. 208s Type 'q()' to quit R. 208s 208s > suppressPackageStartupMessages(library(stars)) 208s > #suppressPackageStartupMessages(library(lwgeom)) 208s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 208s > (x = read_stars(geomatrix)) 208s stars object with 2 dimensions and 1 attribute 208s attribute(s): 208s Min. 1st Qu. Median Mean 3rd Qu. Max. 208s geomatrix.tif 74 107 123 126.765 132 255 208s dimension(s): 208s from to offset delta refsys point x/y 208s x 1 20 1841002 1.5 WGS 84 / UTM zone 11N TRUE [x] 208s y 1 20 1144003 -1.5 WGS 84 / UTM zone 11N TRUE [y] 208s sheared raster with parameters: -5 -5 208s > new = st_crs(4326) 208s > y = st_transform(x, new) 208s > plot(st_transform(st_as_sfc(st_bbox(x)), new), col = NA, border = 'red') 208s > plot(st_as_sfc(y, as_points=FALSE), col = NA, border = 'green', axes = TRUE, add = TRUE) 208s > image(y, add = TRUE) 208s > plot(st_as_sfc(y, as_points=TRUE), pch=3, cex=.5, col = 'blue', add = TRUE) 208s > plot(st_transform(st_as_sfc(x, as_points=FALSE), new), add = TRUE) 208s > 208s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 208s > x = read_stars(tif)[,1:10,1:10,1:3] 208s > x_ = st_transform(x, st_crs(4326)) 208s > ## IGNORE_RDIFF_BEGIN 208s > if (require(lwgeom, quietly = TRUE)) { 208s + x__ = st_transform_proj(x, st_crs(4326)$proj4string) 208s + st_crs(x_) = st_crs(x__) 208s + print(all.equal(x_,x__)) 208s + 208s + # x__ = st_transform(x, x_) #now in st_warp 208s + # all.equal(x_, x__) 208s + 208s + x = st_xy2sfc(x, as_points = FALSE) 208s + (x_ = st_transform(x, st_crs(4326))) 208s + (x__ = st_transform_proj(x, st_crs(4326))) 208s + print(all.equal(x_,x__,check.attributes = FALSE)) 208s + } 208s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.13.0, PROJ 9.5.1 208s 208s Attaching package: 'lwgeom' 208s 208s The following object is masked from 'package:sf': 208s 208s st_perimeter 208s 208s [1] TRUE 209s Warning messages: 209s 1: In fun(libname, pkgname) : 209s GEOS versions differ: lwgeom has 3.13.0 sf has 3.14.1 209s 2: In fun(libname, pkgname) : 209s PROJ versions differ: lwgeom has 9.5.1 sf has 9.7.0 209s Error in st_transform.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 209s !is.na(st_crs(x)) is not TRUE 209s [1] TRUE 209s > ## IGNORE_RDIFF_END 209s > 209s > # nothing to transform: now errs: 209s > try(st_transform(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 209s > try(st_transform_proj(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326))) 209s > 209s Error in st_transform_proj.stars(st_as_stars(list(m = matrix(1, 10, 10))), : 209s !is.na(st_crs(x)) is not TRUE 209s BEGIN TEST warp.R 209s 209s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 209s Copyright (C) 2025 The R Foundation for Statistical Computing 209s Platform: x86_64-pc-linux-gnu 209s 209s R is free software and comes with ABSOLUTELY NO WARRANTY. 209s You are welcome to redistribute it under certain conditions. 209s Type 'license()' or 'licence()' for distribution details. 209s 209s R is a collaborative project with many contributors. 209s Type 'contributors()' for more information and 209s 'citation()' on how to cite R or R packages in publications. 209s 209s Type 'demo()' for some demos, 'help()' for on-line help, or 209s 'help.start()' for an HTML browser interface to help. 209s Type 'q()' to quit R. 209s 209s > suppressPackageStartupMessages(library(stars)) 209s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 209s > x = read_stars(geomatrix) 209s > # can stars reproduce what gdal does, by default? 209s > x2 = st_warp(x, use_gdal = TRUE, no_data_value = -9999) 209s > y = st_warp(x, x2) 209s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE) } 209s > if (interactive()) { plot(y, breaks = "equal", axes=TRUE) } 209s > names(x2) = names(y) 209s > all.equal(x2, y) # yes? 209s [1] TRUE 209s > 209s > # does gdal reproduce with stars template object? 209s > (x2 = setNames(st_warp(x, y, use_gdal = TRUE, no_data_value=-1), "file.tif")) 209s stars object with 2 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 209s file.tif 74 115 123 126.4289 132 255 224 209s dimension(s): 209s from to offset delta refsys point x/y 209s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 209s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 209s > 209s > # does gdal reproduce what stars does, default cell size? 209s > (x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE)) 209s stars object with 2 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 209s geomatrix.tif 74 115 123 126.4289 132 255 224 209s dimension(s): 209s from to offset delta refsys x/y 209s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N [x] 209s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N [y] 209s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 209s stars object with 2 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 209s file.tif 74 115 123 126.4289 132 255 224 209s dimension(s): 209s from to offset delta refsys point x/y 209s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 209s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 209s > 209s > # try with multiple bands: 209s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 209s > (x1 = read_stars(tif)) 209s stars object with 3 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. 209s L7_ETMs.tif 1 54 69 68.91242 86 255 209s dimension(s): 209s from to offset delta refsys point x/y 209s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 209s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 209s band 1 6 NA NA NA NA 209s > tifcp = tempfile(fileext = ".tif") 209s > file.copy(tif, tifcp) 209s [1] TRUE 209s > x1p = read_stars(tifcp, proxy = TRUE) 209s > st_dimensions(x1p) 209s from to offset delta refsys point x/y 209s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 209s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 209s band 1 6 NA NA NA NA 209s > (x1a = st_warp(x1, crs = st_crs(4326))) 209s stars object with 3 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 209s L7_ETMs.tif 1 54 69 68.93072 86 255 8778 209s dimension(s): 209s from to offset delta refsys x/y 209s x 1 350 -34.92 0.0002592 WGS 84 [x] 209s y 1 352 -7.95 -0.0002592 WGS 84 [y] 209s band 1 6 NA NA NA 209s > (x1b = setNames(st_warp(x1, x1p, use_gdal = TRUE, no_data_value=-1), "file.tif")) 209s stars object with 3 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. 209s file.tif 1 54 69 68.91242 86 255 209s dimension(s): 209s from to offset delta refsys point x/y 209s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 209s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 209s band 1 6 NA NA NA NA 209s > 209s > # does gdal reproduce what stars does? Smaller grid: 209s > x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE, cellsize = 3) 209s > # x2 = x2[,2:43,2:43] 209s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE, reset = FALSE) } 209s > if (interactive()) { plot(st_as_sfc(st_bbox(x2)), add = TRUE, col = NA, border = 'red') } 209s > ### doesn't work: FIXME: check with more recent GDAL: 209s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 209s stars object with 2 dimensions and 1 attribute 209s attribute(s): 209s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 209s file.tif 74 107 123 126.6584 132 255 727 209s dimension(s): 209s from to offset delta refsys point x/y 209s x 1 44 1840902 3 WGS 84 / UTM zone 11N FALSE [x] 209s y 1 44 1144003 -3 WGS 84 / UTM zone 11N FALSE [y] 209s > if (interactive()) { plot(y, breaks = "equal") } 209s > names(x2) = names(y) 209s > # isTRUE(all.equal(x2, y, check.attributes=FALSE)) 209s > m = mean(as.vector(x2[[1]]==y[[1]]), na.rm = TRUE) 209s > u = unique(as.vector(x2[[1]]-y[[1]])) 209s > 209s > g = st_as_stars() 209s > attr(g, "dimensions")$x$offset = 0 209s > g$values = as.vector(t(matrix(seq_len(prod(dim(g))), 180, 360))) 209s > if (interactive()) { plot(g, axes=TRUE) } 209s > a = st_warp(g, st_as_stars(), use_gdal=FALSE) 209s > b = st_warp(g, st_as_stars(), use_gdal=TRUE, no_data_value = -1) 209s > all.equal(a, b, check.attributes = FALSE) 209s [1] TRUE 209s > 209s BEGIN TEST write.R 209s 209s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 209s Copyright (C) 2025 The R Foundation for Statistical Computing 209s Platform: x86_64-pc-linux-gnu 209s 209s R is free software and comes with ABSOLUTELY NO WARRANTY. 209s You are welcome to redistribute it under certain conditions. 209s Type 'license()' or 'licence()' for distribution details. 209s 209s R is a collaborative project with many contributors. 209s Type 'contributors()' for more information and 209s 'citation()' on how to cite R or R packages in publications. 209s 209s Type 'demo()' for some demos, 'help()' for on-line help, or 209s 'help.start()' for an HTML browser interface to help. 209s Type 'q()' to quit R. 209s 209s > suppressPackageStartupMessages(library(stars)) 210s > 210s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 210s > (x = read_stars(tif)) 210s stars object with 3 dimensions and 1 attribute 210s attribute(s): 210s Min. 1st Qu. Median Mean 3rd Qu. Max. 210s L7_ETMs.tif 1 54 69 68.91242 86 255 210s dimension(s): 210s from to offset delta refsys point x/y 210s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 210s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 210s band 1 6 NA NA NA NA 210s > 210s > # write stars object: 210s > write_stars(x, tempfile(), driver = "GTiff") 210s > 210s > # write stars_proxy object: 210s > (x = read_stars(tif, proxy = TRUE)) 210s stars_proxy object with 1 attribute in 1 file(s): 210s $L7_ETMs.tif 210s [1] "[...]/L7_ETMs.tif" 210s 210s dimension(s): 210s from to offset delta refsys point x/y 210s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 210s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 210s band 1 6 NA NA NA NA 210s > write_stars(x, tempfile(), driver = "GTiff") 210s 210s > 210s autopkgtest [05:59:20]: test run-unit-test: -----------------------] 211s autopkgtest [05:59:21]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 211s run-unit-test PASS 211s autopkgtest [05:59:21]: test pkg-r-autopkgtest: preparing testbed 229s Creating nova instance adt-resolute-amd64-r-cran-stars-20260210-055550-juju-7f2275-prod-proposed-migration-environment-15-d0eb6c1c-fd00-4665-922a-cf4e1e011d6a from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)... 305s autopkgtest [06:00:55]: testbed dpkg architecture: amd64 305s autopkgtest [06:00:55]: testbed apt version: 3.1.14 305s autopkgtest [06:00:55]: @@@@@@@@@@@@@@@@@@@@ test bed setup 305s autopkgtest [06:00:55]: testbed release detected to be: resolute 306s autopkgtest [06:00:56]: updating testbed package index (apt update) 306s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 306s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 306s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 306s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 306s Get:5 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resolute-proposed/multiverse amd64 Packages [26.4 kB] 307s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B] 307s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B] 308s Fetched 5197 kB in 1s (5859 kB/s) 308s Reading package lists... 309s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 309s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 309s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 309s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 309s Reading package lists... 309s Reading package lists... 310s Building dependency tree... 310s Reading state information... 310s Calculating upgrade... 310s The following package was automatically installed and is no longer required: 310s libpython3.13 310s Use 'sudo apt autoremove' to remove it. 310s The following NEW packages will be installed: 310s gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib 310s linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic 310s linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic 310s linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic 310s The following packages will be upgraded: 310s 3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static 310s cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common 310s dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install 310s ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2 310s iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbrotli1 libbsd0 310s libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common 310s libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64 310s libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0 310s libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0 310s libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64 310s libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0 310s libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic 310s linux-headers-virtual linux-image-generic linux-image-virtual linux-perf 310s linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids 310s pollinate python3-linkify-it python3-markdown-it python3-referencing sed 310s shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget 310s 91 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. 310s Need to get 237 MB of archives. 310s After this operation, 339 MB of additional disk space will be used. 310s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB] 310s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB] 310s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB] 310s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB] 310s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB] 310s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB] 310s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB] 310s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB] 310s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB] 310s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB] 310s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB] 311s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB] 311s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB] 311s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB] 311s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB] 311s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B] 311s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB] 311s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB] 311s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB] 311s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB] 311s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB] 311s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB] 311s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB] 311s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB] 311s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB] 311s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB] 311s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB] 311s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB] 312s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB] 312s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB] 312s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB] 312s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB] 312s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB] 312s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB] 312s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB] 312s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB] 312s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB] 312s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB] 312s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB] 312s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB] 312s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB] 312s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB] 312s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB] 312s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB] 312s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B] 312s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB] 312s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB] 312s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB] 312s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB] 312s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB] 312s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB] 312s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB] 312s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB] 312s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB] 312s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB] 312s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B] 312s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB] 312s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB] 312s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B] 312s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB] 312s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB] 312s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB] 312s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB] 312s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB] 312s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB] 312s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB] 313s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB] 313s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB] 313s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB] 313s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B] 313s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB] 313s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli1 amd64 1.2.0-3 [343 kB] 313s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB] 313s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB] 313s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B] 313s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB] 313s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B] 313s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB] 313s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB] 313s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB] 313s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB] 313s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB] 313s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB] 320s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB] 320s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB] 320s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B] 320s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB] 320s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B] 320s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB] 320s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B] 320s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB] 320s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB] 321s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB] 321s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB] 321s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB] 321s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB] 321s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B] 321s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB] 321s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB] 321s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 321s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB] 321s dpkg-preconfigure: unable to re-open stdin: No such file or directory 321s Fetched 237 MB in 11s (21.9 MB/s) 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 321s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ... 321s Unpacking debianutils (5.23.2build1) over (5.23.2) ... 321s Setting up debianutils (5.23.2build1) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 321s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ... 321s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ... 321s Setting up dash (0.5.12-12ubuntu3) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 321s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ... 321s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ... 321s Setting up findutils (4.10.0-3build2) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 321s Preparing to unpack .../sed_4.9-2build3_amd64.deb ... 321s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 321s Setting up sed (4.9-2build3) ... 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 322s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ... 322s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ... 322s Setting up tar (1.35+dfsg-3.1build2) ... 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 322s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ... 322s Unpacking libattr1:amd64 (1:2.5.2-3build2) over (1:2.5.2-3build1) ... 322s Setting up libattr1:amd64 (1:2.5.2-3build2) ... 322s Selecting previously unselected package gcc-16-base:amd64. 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 322s Preparing to unpack .../gcc-16-base_16-20260208-1ubuntu1_amd64.deb ... 322s Unpacking gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 322s Setting up gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83962 files and directories currently installed.) 322s Preparing to unpack .../libgcc-s1_16-20260208-1ubuntu1_amd64.deb ... 322s Unpacking libgcc-s1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ... 322s Setting up libgcc-s1:amd64 (16-20260208-1ubuntu1) ... 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83962 files and directories currently installed.) 322s Preparing to unpack .../00-libbsd0_0.12.2-2build2_amd64.deb ... 322s Unpacking libbsd0:amd64 (0.12.2-2build2) over (0.12.2-2build1) ... 322s Preparing to unpack .../01-mawk_1.3.4.20260129-1_amd64.deb ... 322s Unpacking mawk (1.3.4.20260129-1) over (1.3.4.20250131-2) ... 322s Preparing to unpack .../02-libstdc++6_16-20260208-1ubuntu1_amd64.deb ... 322s Unpacking libstdc++6:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ... 322s Preparing to unpack .../03-libapt-pkg7.0_3.1.15_amd64.deb ... 322s Unpacking libapt-pkg7.0:amd64 (3.1.15) over (3.1.14) ... 322s Preparing to unpack .../04-apt_3.1.15_amd64.deb ... 322s Unpacking apt (3.1.15) over (3.1.14) ... 322s Preparing to unpack .../05-dbus-system-bus-common_1.16.2-2ubuntu3_all.deb ... 322s Unpacking dbus-system-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ... 322s Preparing to unpack .../06-dbus-session-bus-common_1.16.2-2ubuntu3_all.deb ... 322s Unpacking dbus-session-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ... 322s Preparing to unpack .../07-dbus-user-session_1.16.2-2ubuntu3_amd64.deb ... 322s Unpacking dbus-user-session (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ... 322s Preparing to unpack .../08-dbus-daemon_1.16.2-2ubuntu3_amd64.deb ... 322s Unpacking dbus-daemon (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ... 322s Preparing to unpack .../09-dbus-bin_1.16.2-2ubuntu3_amd64.deb ... 322s Unpacking dbus-bin (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ... 322s Preparing to unpack .../10-dbus_1.16.2-2ubuntu3_amd64.deb ... 322s Unpacking dbus (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ... 322s Preparing to unpack .../11-libdbus-1-3_1.16.2-2ubuntu3_amd64.deb ... 322s Unpacking libdbus-1-3:amd64 (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ... 322s Preparing to unpack .../12-libdevmapper1.02.1_2%3a1.02.205-2ubuntu3_amd64.deb ... 322s Unpacking libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ... 322s Preparing to unpack .../13-dmsetup_2%3a1.02.205-2ubuntu3_amd64.deb ... 322s Unpacking dmsetup (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ... 323s Preparing to unpack .../14-ethtool_1%3a6.15-3build1_amd64.deb ... 323s Unpacking ethtool (1:6.15-3build1) over (1:6.15-3) ... 323s Preparing to unpack .../15-gir1.2-girepository-3.0_2.87.2-2_amd64.deb ... 323s Unpacking gir1.2-girepository-3.0:amd64 (2.87.2-2) over (2.86.3-4) ... 323s Preparing to unpack .../16-libgirepository-2.0-0_2.87.2-2_amd64.deb ... 323s Unpacking libgirepository-2.0-0:amd64 (2.87.2-2) over (2.86.3-4) ... 323s Preparing to unpack .../17-libatomic1_16-20260208-1ubuntu1_amd64.deb ... 323s Unpacking libatomic1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ... 323s Preparing to unpack .../18-gir1.2-glib-2.0_2.87.2-2_amd64.deb ... 323s Unpacking gir1.2-glib-2.0:amd64 (2.87.2-2) over (2.86.3-4) ... 323s Preparing to unpack .../19-libglib2.0-0t64_2.87.2-2_amd64.deb ... 323s Unpacking libglib2.0-0t64:amd64 (2.87.2-2) over (2.86.3-4) ... 323s Preparing to unpack .../20-libbpf1_1%3a1.6.2-1build1_amd64.deb ... 323s Unpacking libbpf1:amd64 (1:1.6.2-1build1) over (1:1.6.2-1) ... 323s Preparing to unpack .../21-iptables_1.8.11-2ubuntu3_amd64.deb ... 323s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 323s Preparing to unpack .../22-libip4tc2_1.8.11-2ubuntu3_amd64.deb ... 323s Unpacking libip4tc2:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ... 323s 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up libonig5:amd64 (6.9.10-1build1) ... 343s Setting up libbpf1:amd64 (1:1.6.2-1build1) ... 343s Setting up ethtool (1:6.15-3build1) ... 343s Setting up python3-referencing (0.36.2-1ubuntu2) ... 343s Setting up libxkbcommon0:amd64 (1.13.1-1) ... 343s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 343s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ... 343s Setting up tcpdump (4.99.5-2ubuntu3) ... 343s Setting up linux-image-generic (6.19.0-3.3) ... 343s Setting up wget (1.25.0-2ubuntu4) ... 343s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ... 343s Setting up iptables (1.8.11-2ubuntu3) ... 343s Setting up iproute2 (6.18.0-1ubuntu1) ... 343s Setting up linux-headers-generic (6.19.0-3.3) ... 343s Setting up dbus-daemon (1.16.2-2ubuntu3) ... 343s Setting up hwdata (0.394-1build1) ... 343s Setting up dbus-user-session (1.16.2-2ubuntu3) ... 343s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ... 343s No schema files found: doing nothing. 343s Setting up dbus (1.16.2-2ubuntu3) ... 343s A reboot is required to replace the running dbus-daemon. 343s Please reboot the system when convenient. 343s Setting up shared-mime-info (2.4-5build3) ... 344s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ... 344s Setting up pciutils (1:3.14.0-1build2) ... 344s Setting up python3-markdown-it (3.0.0-3build1) ... 344s Setting up libdrm2:amd64 (2.4.131-1) ... 344s Setting up libpython3.14:amd64 (3.14.2-1) ... 344s Setting up libapt-pkg7.0:amd64 (3.1.15) ... 344s Setting up linux-tools-common (6.19.0-3.3) ... 344s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ... 344s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ... 344s Setting up apt (3.1.15) ... 345s Setting up linux-headers-virtual (6.19.0-3.3) ... 345s Setting up linux-generic (6.19.0-3.3) ... 345s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ... 345s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ... 345s Setting up ubuntu-standard (1.564) ... 345s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ... 345s Setting up linux-virtual (6.19.0-3.3) ... 345s Setting up linux-perf (6.19.0-3.3) ... 345s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ... 345s Processing triggers for debianutils (5.23.2build1) ... 345s Processing triggers for install-info (7.2-5) ... 345s Processing triggers for initramfs-tools (0.150ubuntu7) ... 345s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 349s Processing triggers for libc-bin (2.42-2ubuntu4) ... 349s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ... 349s /etc/kernel/postinst.d/initramfs-tools: 349s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic 353s /etc/kernel/postinst.d/zz-update-grub: 353s Sourcing file `/etc/default/grub' 353s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 353s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 353s Generating grub configuration file ... 353s Found linux image: /boot/vmlinuz-6.19.0-3-generic 353s Found initrd image: /boot/initrd.img-6.19.0-3-generic 353s Found linux image: /boot/vmlinuz-6.18.0-9-generic 353s Found initrd image: /boot/initrd.img-6.18.0-9-generic 353s Warning: os-prober will not be executed to detect other bootable partitions. 353s Systems on them will not be added to the GRUB boot configuration. 353s Check GRUB_DISABLE_OS_PROBER documentation entry. 353s Adding boot menu entry for UEFI Firmware Settings ... 353s done 353s autopkgtest [06:01:43]: upgrading testbed (apt dist-upgrade and autopurge) 354s Reading package lists... 354s Building dependency tree... 354s Reading state information... 354s Calculating upgrade... 355s The following package was automatically installed and is no longer required: 355s libpython3.13 355s Use 'sudo apt autoremove' to remove it. 355s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 355s Reading package lists... 355s Building dependency tree... 355s Reading state information... 355s Solving dependencies... 355s The following packages will be REMOVED: 355s libpython3.13* 355s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 355s After this operation, 7599 kB disk space will be freed. 355s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125273 files and directories currently installed.) 355s Removing libpython3.13:amd64 (3.13.11-1) ... 355s Processing triggers for libc-bin (2.42-2ubuntu4) ... 355s autopkgtest [06:01:45]: rebooting testbed after setup commands that affected boot 386s Reading package lists... 386s Building dependency tree... 386s Reading state information... 386s Solving dependencies... 387s The following NEW packages will be installed: 387s build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu 387s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 387s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15 387s g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 387s gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gfortran 387s gfortran-15 gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu 387s icu-devtools javascript-common libabsl20260107 libaec0 libaom3 387s libarmadillo15 libarpack2t64 libasan8 libavif16 libblas-dev libblas3 387s libblosc1 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 387s libcfitsio10t64 libcrypt-dev libdatrie1 libdav1d7 libde265-0 libdeflate-dev 387s libdeflate0 libfontconfig1 libfreexl1 libfyba0t64 libgav1-2 libgcc-15-dev 387s libgdal38 libgeos-c1t64 libgeos3.14.1 libgeotiff5 libgfortran-15-dev 387s libgfortran5 libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b 387s libhdf4-0 libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec 387s libheif-plugin-libde265 libheif1 libhwasan0 libhwy1t64 libice6 libicu-dev 387s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 387s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 387s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 387s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 387s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 387s libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 libkmlbase1t64 387s libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3 liblcms2-2 liblerc4 387s liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64 libmpc3 387s libmuparser2v5 libmysqlclient24 libncurses-dev libnetcdf22 libodbc2 387s libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 387s libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 387s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 387s libpoppler147 libpq5 libproj25 libqhull-r8.0 libquadmath0 libreadline-dev 387s librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64 387s libstdc++-15-dev libsuperlu7 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 387s libtirpc-dev libtk8.6 libtsan2 libubsan1 libudunits2-0 libudunits2-data 387s liburiparser1 libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 387s libxrender1 libxss1 libxt6t64 libyuv0 libzstd-dev linux-libc-dev 387s mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc 387s pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin proj-data r-base-core 387s r-base-dev r-cran-abind r-cran-areal r-cran-askpass r-cran-base64enc 387s r-cran-bdsmatrix r-cran-brio r-cran-bslib r-cran-cachem r-cran-cairo 387s r-cran-callr r-cran-cftime r-cran-class r-cran-classint r-cran-cli 387s r-cran-clue r-cran-cluster r-cran-codetools r-cran-collapse 387s r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon r-cran-curl 387s r-cran-dbi r-cran-deldir r-cran-desc r-cran-diffobj r-cran-digest 387s r-cran-dplyr r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver 387s r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula r-cran-fs 387s r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 387s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 387s r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-httpuv 387s r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib r-cran-jsonlite 387s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 387s r-cran-lazyeval r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lmtest 387s r-cran-lwgeom r-cran-magrittr r-cran-mapdata r-cran-maps r-cran-mass 387s r-cran-matrix r-cran-maxlik r-cran-memoise r-cran-mgcv r-cran-mime 387s r-cran-misctools r-cran-ncdfgeom r-cran-ncmeta r-cran-nlme r-cran-openssl 387s r-cran-parallelly r-cran-pbapply r-cran-pillar r-cran-pkgbuild 387s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plm r-cran-polyclip 387s r-cran-praise r-cran-processx r-cran-promises r-cran-proxy r-cran-ps 387s r-cran-purrr r-cran-r6 r-cran-randomforest r-cran-rappdirs r-cran-raster 387s r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen 387s r-cran-rdpack r-cran-rex r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf 387s r-cran-rpart r-cran-rprojroot r-cran-s2 r-cran-s7 r-cran-sandwich 387s r-cran-sass r-cran-scales r-cran-sf r-cran-shiny r-cran-sourcetools 387s r-cran-sp r-cran-spacetime r-cran-spatstat r-cran-spatstat.data 387s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.linnet 387s r-cran-spatstat.model r-cran-spatstat.random r-cran-spatstat.sparse 387s r-cran-spatstat.univar r-cran-spatstat.utils r-cran-stars r-cran-stringi 387s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 387s r-cran-terra r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 387s r-cran-tinytex r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs 387s r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk 387s r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo rpcsvc-proto 387s unixodbc-common unzip x11-common xdg-utils zip zlib1g-dev 387s 0 upgraded, 349 newly installed, 0 to remove and 0 not upgraded. 387s Need to get 407 MB of archives. 387s After this operation, 1178 MB of additional disk space will be used. 387s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB] 387s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB] 387s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB] 387s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB] 387s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB] 387s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB] 387s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB] 387s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB] 388s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B] 388s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 388s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 388s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB] 388s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB] 388s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB] 388s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB] 388s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB] 388s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB] 388s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB] 388s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB] 388s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB] 388s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB] 389s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB] 390s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB] 390s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 390s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 390s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB] 390s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB] 391s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB] 391s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 391s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 391s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B] 391s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB] 391s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 391s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB] 391s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB] 391s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB] 392s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB] 392s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 392s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 392s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 392s Get:41 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-data all 3.12.1+dfsg-1 [278 kB] 392s Get:42 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-plugins amd64 3.12.1+dfsg-1 [26.8 kB] 392s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB] 392s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB] 392s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB] 393s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB] 393s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B] 393s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B] 393s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB] 393s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B] 393s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libabsl20260107 amd64 20260107.0-1 [587 kB] 393s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB] 393s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libaom3 amd64 3.13.1-2 [1970 kB] 393s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 393s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 393s Get:56 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2t64 amd64 3.9.1-6 [108 kB] 393s Get:57 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu7 amd64 7.0.1+dfsg1-2 [186 kB] 393s Get:58 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarmadillo15 amd64 1:15.2.1+dfsg-2 [109 kB] 393s Get:59 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdav1d7 amd64 1.5.3-1 [626 kB] 393s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgav1-2 amd64 0.20.0-2build1 [402 kB] 393s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB] 393s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B] 393s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libyuv0 amd64 0.0.1922.20260106-1 [184 kB] 393s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 libavif16 amd64 1.3.0-1ubuntu3 [117 kB] 393s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB] 393s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.8 kB] 393s Get:67 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc1 amd64 1.21.5+ds-2 [35.8 kB] 393s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB] 393s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB] 393s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB] 393s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B] 393s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 393s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB] 393s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcfitsio10t64 amd64 4.6.3-1 [549 kB] 393s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB] 393s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libde265-0 amd64 1.0.16-1build1 [172 kB] 393s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB] 393s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB] 393s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfyba0t64 amd64 4.1.1-11build2 [120 kB] 393s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [23.5 kB] 393s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfreexl1 amd64 2.0.0-1build3 [42.9 kB] 393s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos3.14.1 amd64 3.14.1-2 [976 kB] 393s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos-c1t64 amd64 3.14.1-2 [116 kB] 393s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 proj-data all 9.7.1-1 [7950 kB] 394s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB] 394s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB] 394s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB] 394s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB] 394s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 394s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 libproj25 amd64 9.7.1-1 [1499 kB] 394s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeotiff5 amd64 1.7.4-1build1 [61.5 kB] 394s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 libgif7 amd64 5.2.2-1ubuntu3 [36.0 kB] 394s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB] 394s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf4-0 amd64 4.3.1-2 [318 kB] 394s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB] 394s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-aomdec amd64 1.21.2-1 [14.2 kB] 394s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-libde265 amd64 1.21.2-1 [9978 B] 394s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif1 amd64 1.21.2-1 [544 kB] 394s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwy1t64 amd64 1.3.0-2 [768 kB] 394s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 liblcms2-2 amd64 2.17-1 [170 kB] 394s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libjxl0.11 amd64 0.11.1-6ubuntu1 [1122 kB] 394s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB] 394s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlbase1t64 amd64 1.3.0-13 [51.7 kB] 394s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmldom1t64 amd64 1.3.0-13 [156 kB] 394s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlengine1t64 amd64 1.3.0-13 [74.1 kB] 394s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmuparser2v5 amd64 2.3.4-2 [143 kB] 394s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B] 394s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libmysqlclient24 amd64 8.4.8-0ubuntu1 [1258 kB] 394s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB] 394s Get:110 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnetcdf22 amd64 1:4.9.3-1build1 [561 kB] 394s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl7 amd64 2.5.4-9 [43.7 kB] 394s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbc2 amd64 2.3.14-1 [160 kB] 394s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 unixodbc-common all 2.3.14-1 [8792 B] 394s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbcinst2 amd64 2.3.14-1 [32.0 kB] 394s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libopenjp2-7 amd64 2.5.4-1 [188 kB] 395s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpgmepp6t64 amd64 1.24.2-3ubuntu2 [124 kB] 395s Get:117 http://ftpmaster.internal/ubuntu resolute/main amd64 libpoppler147 amd64 25.03.0-11.1 [1224 kB] 395s Get:118 http://ftpmaster.internal/ubuntu resolute/main amd64 libpq5 amd64 18.1-2 [155 kB] 395s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqhull-r8.0 amd64 2020.2-8 [197 kB] 395s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 librttopo1 amd64 1.1.0-4build1 [189 kB] 395s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspatialite8t64 amd64 5.1.0-3ubuntu1 [1927 kB] 395s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3build2 [991 kB] 395s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgdal38 amd64 3.12.1+dfsg-1 [11.4 MB] 396s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB] 396s Get:125 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB] 396s Get:126 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 396s Get:127 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB] 396s Get:128 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB] 396s Get:129 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB] 396s Get:130 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B] 396s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B] 396s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 396s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 396s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 396s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB] 396s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 396s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 396s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 396s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 396s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 396s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 396s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 396s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 396s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 396s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 396s Get:146 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB] 397s Get:147 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB] 397s Get:148 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB] 397s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB] 397s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB] 397s Get:151 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB] 397s Get:152 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB] 397s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB] 397s Get:154 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB] 397s Get:155 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB] 397s Get:156 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB] 397s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB] 397s Get:158 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B] 397s Get:159 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB] 397s Get:160 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB] 397s Get:161 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB] 397s Get:162 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB] 397s Get:163 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB] 397s Get:164 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB] 397s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB] 397s Get:166 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB] 397s Get:167 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B] 397s Get:168 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 397s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-data all 2.2.28-8 [19.3 kB] 397s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-0 amd64 2.2.28-8 [54.6 kB] 397s Get:171 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB] 397s Get:172 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB] 397s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 397s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 397s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 397s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 397s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB] 397s Get:178 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB] 397s Get:179 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB] 397s Get:180 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 397s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB] 398s Get:182 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB] 398s Get:183 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB] 398s Get:184 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB] 398s Get:185 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB] 398s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 398s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B] 398s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 398s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 398s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB] 398s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 398s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB] 398s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 398s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 398s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 398s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 398s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 398s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 398s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB] 398s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 398s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 398s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 398s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 398s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 398s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 398s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB] 398s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB] 398s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] 398s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-e1071 amd64 1.7-17-1 [579 kB] 398s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB] 398s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-classint amd64 0.4-11+dfsg-1 [108 kB] 398s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB] 398s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB] 398s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 398s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB] 398s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB] 398s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s2 amd64 1.1.9-1build1 [1815 kB] 399s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-units amd64 0.8-7+dfsg-2 [300 kB] 399s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sf amd64 1.0-19+dfsg-2build2 [3298 kB] 399s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 399s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 399s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 399s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB] 399s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB] 399s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 399s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 399s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 399s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB] 399s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 399s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 399s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 399s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 399s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 399s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 399s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB] 399s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 399s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 399s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB] 399s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 399s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 399s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 399s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cftime all 1.7.2-1 [918 kB] 399s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cluster amd64 2.1.8.2-1 [570 kB] 399s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clue amd64 0.3-66-1 [968 kB] 399s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 399s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-collapse amd64 2.1.0-1 [3485 kB] 400s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB] 400s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB] 400s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rex all 1.2.1-1build1 [126 kB] 400s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB] 400s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 400s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 400s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 400s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 400s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-covr amd64 3.6.4+dfsg-1 [303 kB] 400s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB] 400s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 400s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 400s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB] 400s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB] 400s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 400s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB] 400s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 400s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formula all 1.2-5-1 [158 kB] 400s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-globals all 0.19.0-1 [160 kB] 400s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB] 400s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB] 400s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB] 400s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] 400s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 400s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 400s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB] 400s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 400s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 400s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB] 400s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB] 400s Get:277 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 401s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tweenr amd64 2.0.3-1 [410 kB] 401s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB] 401s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB] 401s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB] 401s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB] 401s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 401s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggforce amd64 0.4.2-1 [1777 kB] 401s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB] 401s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 401s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggthemes all 5.2.0-1 [760 kB] 401s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-goftest amd64 1.2-3-1build1 [60.5 kB] 401s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB] 401s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB] 401s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 401s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 401s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 401s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 402s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-intervals amd64 0.15.5-1 [602 kB] 402s Get:296 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 402s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 402s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-zoo amd64 1.8-15-1 [1025 kB] 402s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lmtest amd64 0.9.40-1build1 [400 kB] 402s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lwgeom amd64 0.2-14-1 [463 kB] 402s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-maps amd64 3.4.2.1-1 [2352 kB] 402s Get:302 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mapdata amd64 2.3.1-1 [23.5 MB] 403s Get:303 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB] 404s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sandwich all 3.1-1-1build1 [1483 kB] 404s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-maxlik all 1.5-2.2-1 [1115 kB] 404s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB] 404s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB] 404s Get:308 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rnetcdf amd64 2.9-2-1 [254 kB] 404s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 404s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ncmeta all 0.4.0-1 [362 kB] 404s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stars all 0.7-0-1 [4415 kB] 404s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 405s Get:313 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB] 405s Get:314 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 405s Get:315 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB] 405s Get:316 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB] 405s Get:317 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB] 405s Get:318 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB] 405s Get:319 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plm all 2.6-7-1 [1823 kB] 405s Get:320 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 405s Get:321 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-randomforest amd64 4.7-1.2-1 [216 kB] 405s Get:322 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB] 405s Get:323 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-terra amd64 1.8-70-1build2 [4344 kB] 405s Get:324 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-raster amd64 3.6-31-2 [3174 kB] 405s Get:325 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB] 405s Get:326 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 405s Get:327 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 405s Get:328 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 405s Get:329 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 405s Get:330 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 405s Get:331 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 405s Get:332 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB] 406s Get:333 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB] 406s Get:334 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xts amd64 0.14.1-1 [1198 kB] 406s Get:335 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spacetime all 1.3-3-2 [2780 kB] 406s Get:336 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.utils amd64 3.1-3-1 [387 kB] 406s Get:337 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.data all 3.1-6-1 [4153 kB] 406s Get:338 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.univar amd64 3.1-2-1 [315 kB] 406s Get:339 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.geom amd64 3.3-6-1 [3968 kB] 406s Get:340 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.random amd64 3.3-3-1 [1177 kB] 406s Get:341 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tensor all 1.5-4build1 [16.3 kB] 406s Get:342 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB] 406s Get:343 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.explore amd64 3.3-4-1 [3347 kB] 407s Get:344 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.model amd64 3.3-4-1 [3397 kB] 407s Get:345 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.linnet amd64 3.2-5-1 [1509 kB] 407s Get:346 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat amd64 3.3-1-1 [4121 kB] 407s Get:347 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB] 407s Get:348 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 407s Get:349 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 407s Preconfiguring packages ... 408s Fetched 407 MB in 20s (20.1 MB/s) 408s Selecting previously unselected package libc-dev-bin. 408s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125269 files and directories currently installed.) 408s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ... 408s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 408s Selecting previously unselected package linux-libc-dev:amd64. 408s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ... 408s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ... 408s Selecting previously unselected package libcrypt-dev:amd64. 408s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ... 408s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ... 408s Selecting previously unselected package rpcsvc-proto. 408s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ... 408s Unpacking rpcsvc-proto (1.4.3-1build1) ... 408s Selecting previously unselected package libc6-dev:amd64. 408s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ... 408s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ... 408s Selecting previously unselected package libisl23:amd64. 408s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ... 408s Unpacking libisl23:amd64 (0.27-1build1) ... 408s Selecting previously unselected package libmpc3:amd64. 408s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ... 408s Unpacking libmpc3:amd64 (1.3.1-2) ... 408s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 408s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 408s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 408s Selecting previously unselected package cpp-15. 408s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ... 408s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 408s Selecting previously unselected package cpp-x86-64-linux-gnu. 408s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 408s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 408s Selecting previously unselected package cpp. 408s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ... 408s Unpacking cpp (4:15.2.0-4ubuntu1) ... 408s Selecting previously unselected package libcc1-0:amd64. 408s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libgomp1:amd64. 408s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libitm1:amd64. 408s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libasan8:amd64. 408s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package liblsan0:amd64. 408s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libtsan2:amd64. 408s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libubsan1:amd64. 408s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libhwasan0:amd64. 408s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libquadmath0:amd64. 408s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ... 408s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ... 408s Selecting previously unselected package libgcc-15-dev:amd64. 408s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ... 408s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ... 408s Selecting previously unselected package gcc-15-x86-64-linux-gnu. 408s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 408s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 409s Selecting previously unselected package gcc-15. 409s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ... 409s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 409s Selecting previously unselected package gcc-x86-64-linux-gnu. 409s Preparing to unpack .../023-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 409s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 409s Selecting previously unselected package gcc. 409s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ... 409s Unpacking gcc (4:15.2.0-4ubuntu1) ... 409s Selecting previously unselected package libstdc++-15-dev:amd64. 409s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ... 409s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ... 409s Selecting previously unselected package g++-15-x86-64-linux-gnu. 409s Preparing to unpack .../026-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 409s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 409s Selecting previously unselected package g++-15. 409s Preparing to unpack .../027-g++-15_15.2.0-12ubuntu1_amd64.deb ... 409s Unpacking g++-15 (15.2.0-12ubuntu1) ... 409s Selecting previously unselected package g++-x86-64-linux-gnu. 409s Preparing to unpack .../028-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 409s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 409s Selecting previously unselected package g++. 409s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_amd64.deb ... 409s Unpacking g++ (4:15.2.0-4ubuntu1) ... 409s Selecting previously unselected package build-essential. 409s Preparing to unpack .../030-build-essential_12.12ubuntu2_amd64.deb ... 409s Unpacking build-essential (12.12ubuntu2) ... 409s Selecting previously unselected package dctrl-tools. 409s Preparing to unpack .../031-dctrl-tools_2.24-3build4_amd64.deb ... 409s Unpacking dctrl-tools (2.24-3build4) ... 409s Selecting previously unselected package fonts-dejavu-mono. 409s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8build1_all.deb ... 409s Unpacking fonts-dejavu-mono (2.37-8build1) ... 409s Selecting previously unselected package fonts-dejavu-core. 409s Preparing to unpack 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package icu-devtools. 410s Preparing to unpack .../048-icu-devtools_78.2-1ubuntu1_amd64.deb ... 410s Unpacking icu-devtools (78.2-1ubuntu1) ... 410s Selecting previously unselected package javascript-common. 410s Preparing to unpack .../049-javascript-common_12+nmu1build1_all.deb ... 410s Unpacking javascript-common (12+nmu1build1) ... 410s Selecting previously unselected package libabsl20260107:amd64. 410s Preparing to unpack .../050-libabsl20260107_20260107.0-1_amd64.deb ... 410s Unpacking libabsl20260107:amd64 (20260107.0-1) ... 410s Selecting previously unselected package libaec0:amd64. 410s Preparing to unpack .../051-libaec0_1.1.5-1_amd64.deb ... 410s Unpacking libaec0:amd64 (1.1.5-1) ... 410s Selecting previously unselected package libaom3:amd64. 410s Preparing to unpack .../052-libaom3_3.13.1-2_amd64.deb ... 410s Unpacking libaom3:amd64 (3.13.1-2) ... 410s Selecting previously unselected package libblas3:amd64. 410s Preparing to unpack .../053-libblas3_3.12.1-7ubuntu1_amd64.deb ... 410s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ... 410s Selecting previously unselected package liblapack3:amd64. 410s Preparing to unpack .../054-liblapack3_3.12.1-7ubuntu1_amd64.deb ... 410s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ... 410s Selecting previously unselected package libarpack2t64:amd64. 410s Preparing to unpack .../055-libarpack2t64_3.9.1-6_amd64.deb ... 410s Unpacking libarpack2t64:amd64 (3.9.1-6) ... 410s Selecting previously unselected package libsuperlu7:amd64. 410s Preparing to unpack .../056-libsuperlu7_7.0.1+dfsg1-2_amd64.deb ... 410s Unpacking libsuperlu7:amd64 (7.0.1+dfsg1-2) ... 410s Selecting previously unselected package libarmadillo15. 410s Preparing to unpack .../057-libarmadillo15_1%3a15.2.1+dfsg-2_amd64.deb ... 410s Unpacking libarmadillo15 (1:15.2.1+dfsg-2) ... 410s Selecting previously unselected package libdav1d7:amd64. 410s Preparing to unpack .../058-libdav1d7_1.5.3-1_amd64.deb ... 410s Unpacking libdav1d7:amd64 (1.5.3-1) ... 410s Selecting previously unselected package libgav1-2:amd64. 410s Preparing to unpack .../059-libgav1-2_0.20.0-2build1_amd64.deb ... 410s Unpacking libgav1-2:amd64 (0.20.0-2build1) ... 410s Selecting previously unselected package libjpeg-turbo8:amd64. 410s Preparing to unpack .../060-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ... 410s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ... 410s Selecting previously unselected package libjpeg8:amd64. 410s Preparing to unpack .../061-libjpeg8_8c-2ubuntu12_amd64.deb ... 410s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ... 410s Selecting previously unselected package libyuv0:amd64. 410s Preparing to unpack .../062-libyuv0_0.0.1922.20260106-1_amd64.deb ... 410s Unpacking libyuv0:amd64 (0.0.1922.20260106-1) ... 410s Selecting previously unselected package libavif16:amd64. 410s Preparing to unpack .../063-libavif16_1.3.0-1ubuntu3_amd64.deb ... 410s Unpacking libavif16:amd64 (1.3.0-1ubuntu3) ... 410s Selecting previously unselected package libblas-dev:amd64. 410s 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previously unselected package libde265-0:amd64. 410s Preparing to unpack .../075-libde265-0_1.0.16-1build1_amd64.deb ... 410s Unpacking libde265-0:amd64 (1.0.16-1build1) ... 410s Selecting previously unselected package libdeflate0:amd64. 410s Preparing to unpack .../076-libdeflate0_1.23-2build1_amd64.deb ... 410s Unpacking libdeflate0:amd64 (1.23-2build1) ... 410s Selecting previously unselected package libdeflate-dev:amd64. 410s Preparing to unpack .../077-libdeflate-dev_1.23-2build1_amd64.deb ... 410s Unpacking libdeflate-dev:amd64 (1.23-2build1) ... 410s Selecting previously unselected package libfyba0t64:amd64. 410s Preparing to unpack .../078-libfyba0t64_4.1.1-11build2_amd64.deb ... 410s Unpacking libfyba0t64:amd64 (4.1.1-11build2) ... 410s Selecting previously unselected package libminizip1t64:amd64. 410s Preparing to unpack .../079-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ... 410s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 410s Selecting previously unselected package libfreexl1:amd64. 410s Preparing to unpack .../080-libfreexl1_2.0.0-1build3_amd64.deb ... 410s Unpacking libfreexl1:amd64 (2.0.0-1build3) ... 410s Selecting previously unselected package libgeos3.14.1:amd64. 410s Preparing to unpack .../081-libgeos3.14.1_3.14.1-2_amd64.deb ... 410s Unpacking libgeos3.14.1:amd64 (3.14.1-2) ... 410s Selecting previously unselected package libgeos-c1t64:amd64. 410s Preparing to unpack .../082-libgeos-c1t64_3.14.1-2_amd64.deb ... 410s Unpacking libgeos-c1t64:amd64 (3.14.1-2) ... 410s Selecting previously unselected package proj-data. 410s Preparing to unpack .../083-proj-data_9.7.1-1_all.deb ... 410s Unpacking proj-data (9.7.1-1) ... 410s Selecting previously unselected package libjbig0:amd64. 410s Preparing to unpack .../084-libjbig0_2.1-6.1ubuntu3_amd64.deb ... 410s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ... 410s Selecting previously unselected package liblerc4:amd64. 410s Preparing to unpack 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libgeotiff5:amd64 (1.7.4-1build1) ... 410s Selecting previously unselected package libgif7:amd64. 410s Preparing to unpack .../091-libgif7_5.2.2-1ubuntu3_amd64.deb ... 410s Unpacking libgif7:amd64 (5.2.2-1ubuntu3) ... 410s Selecting previously unselected package libsz2:amd64. 410s Preparing to unpack .../092-libsz2_1.1.5-1_amd64.deb ... 410s Unpacking libsz2:amd64 (1.1.5-1) ... 410s Selecting previously unselected package libhdf4-0:amd64. 410s Preparing to unpack .../093-libhdf4-0_4.3.1-2_amd64.deb ... 410s Unpacking libhdf4-0:amd64 (4.3.1-2) ... 410s Selecting previously unselected package libhdf5-310:amd64. 410s Preparing to unpack .../094-libhdf5-310_1.14.6+repack-2_amd64.deb ... 410s Unpacking libhdf5-310:amd64 (1.14.6+repack-2) ... 410s Selecting previously unselected package libheif-plugin-aomdec:amd64. 410s Preparing to unpack .../095-libheif-plugin-aomdec_1.21.2-1_amd64.deb ... 410s Unpacking libheif-plugin-aomdec:amd64 (1.21.2-1) ... 410s Selecting previously unselected package libheif-plugin-libde265:amd64. 410s Preparing to unpack .../096-libheif-plugin-libde265_1.21.2-1_amd64.deb ... 410s Unpacking libheif-plugin-libde265:amd64 (1.21.2-1) ... 410s Selecting previously unselected package libheif1:amd64. 410s Preparing to unpack .../097-libheif1_1.21.2-1_amd64.deb ... 410s Unpacking libheif1:amd64 (1.21.2-1) ... 410s Selecting previously unselected package libhwy1t64:amd64. 410s Preparing to unpack .../098-libhwy1t64_1.3.0-2_amd64.deb ... 410s Unpacking libhwy1t64:amd64 (1.3.0-2) ... 410s Selecting previously unselected package liblcms2-2:amd64. 410s Preparing to unpack .../099-liblcms2-2_2.17-1_amd64.deb ... 410s Unpacking liblcms2-2:amd64 (2.17-1) ... 410s Selecting previously unselected package libjxl0.11:amd64. 410s Preparing to unpack .../100-libjxl0.11_0.11.1-6ubuntu1_amd64.deb ... 410s Unpacking libjxl0.11:amd64 (0.11.1-6ubuntu1) ... 410s Selecting previously unselected package liburiparser1:amd64. 410s Preparing to unpack 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Unpacking mysql-common (5.8+1.1.1ubuntu2) ... 411s Selecting previously unselected package libmysqlclient24:amd64. 411s Preparing to unpack .../107-libmysqlclient24_8.4.8-0ubuntu1_amd64.deb ... 411s Unpacking libmysqlclient24:amd64 (8.4.8-0ubuntu1) ... 411s Selecting previously unselected package libhdf5-hl-310:amd64. 411s Preparing to unpack .../108-libhdf5-hl-310_1.14.6+repack-2_amd64.deb ... 411s Unpacking libhdf5-hl-310:amd64 (1.14.6+repack-2) ... 411s Selecting previously unselected package libnetcdf22:amd64. 411s Preparing to unpack .../109-libnetcdf22_1%3a4.9.3-1build1_amd64.deb ... 411s Unpacking libnetcdf22:amd64 (1:4.9.3-1build1) ... 411s Selecting previously unselected package libltdl7:amd64. 411s Preparing to unpack .../110-libltdl7_2.5.4-9_amd64.deb ... 411s Unpacking libltdl7:amd64 (2.5.4-9) ... 411s Selecting previously unselected package libodbc2:amd64. 411s Preparing to unpack .../111-libodbc2_2.3.14-1_amd64.deb ... 411s Unpacking libodbc2:amd64 (2.3.14-1) ... 411s Selecting previously unselected package unixodbc-common. 411s Preparing to unpack .../112-unixodbc-common_2.3.14-1_all.deb ... 411s Unpacking unixodbc-common (2.3.14-1) ... 411s Selecting previously unselected package libodbcinst2:amd64. 411s Preparing to unpack .../113-libodbcinst2_2.3.14-1_amd64.deb ... 411s Unpacking libodbcinst2:amd64 (2.3.14-1) ... 411s Selecting previously unselected package libopenjp2-7:amd64. 411s Preparing to unpack .../114-libopenjp2-7_2.5.4-1_amd64.deb ... 411s Unpacking libopenjp2-7:amd64 (2.5.4-1) ... 411s Selecting previously unselected package libgpgmepp6t64:amd64. 411s Preparing to unpack .../115-libgpgmepp6t64_1.24.2-3ubuntu2_amd64.deb ... 411s Unpacking libgpgmepp6t64:amd64 (1.24.2-3ubuntu2) ... 411s Selecting previously unselected package libpoppler147:amd64. 411s Preparing to unpack .../116-libpoppler147_25.03.0-11.1_amd64.deb ... 411s Unpacking libpoppler147:amd64 (25.03.0-11.1) ... 411s Selecting previously unselected package libpq5:amd64. 411s Preparing to unpack .../117-libpq5_18.1-2_amd64.deb ... 411s Unpacking libpq5:amd64 (18.1-2) ... 411s Selecting previously unselected package libqhull-r8.0:amd64. 411s Preparing to unpack .../118-libqhull-r8.0_2020.2-8_amd64.deb ... 411s Unpacking libqhull-r8.0:amd64 (2020.2-8) ... 411s Selecting previously unselected package librttopo1:amd64. 411s Preparing to unpack .../119-librttopo1_1.1.0-4build1_amd64.deb ... 411s Unpacking librttopo1:amd64 (1.1.0-4build1) ... 411s Selecting previously unselected package libspatialite8t64:amd64. 411s Preparing to unpack .../120-libspatialite8t64_5.1.0-3ubuntu1_amd64.deb ... 411s Unpacking libspatialite8t64:amd64 (5.1.0-3ubuntu1) ... 411s Selecting previously unselected package libxerces-c3.2t64:amd64. 411s Preparing to unpack .../121-libxerces-c3.2t64_3.2.4+debian-1.3build2_amd64.deb ... 411s Unpacking libxerces-c3.2t64:amd64 (3.2.4+debian-1.3build2) ... 411s Selecting previously unselected package libgdal38:amd64. 411s Preparing to unpack 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libicu-dev:amd64 (78.2-1ubuntu1) ... 411s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 411s Preparing to unpack .../128-libjpeg-turbo8-dev_2.1.5-4ubuntu3_amd64.deb ... 411s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ... 411s Selecting previously unselected package libjpeg8-dev:amd64. 411s Preparing to unpack .../129-libjpeg8-dev_8c-2ubuntu12_amd64.deb ... 411s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu12) ... 411s Selecting previously unselected package libjpeg-dev:amd64. 411s Preparing to unpack .../130-libjpeg-dev_8c-2ubuntu12_amd64.deb ... 411s Unpacking libjpeg-dev:amd64 (8c-2ubuntu12) ... 411s Selecting previously unselected package libjs-bootstrap. 411s Preparing to unpack .../131-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 411s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 411s Selecting previously unselected package libjs-popper.js. 411s Preparing to unpack .../132-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 411s Unpacking libjs-popper.js 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package libjs-jquery-datatables. 411s Preparing to unpack .../138-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 411s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 411s Selecting previously unselected package libjs-sifter.js. 411s Preparing to unpack .../139-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 411s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 411s Selecting previously unselected package libjs-microplugin.js. 411s Preparing to unpack .../140-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ... 411s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ... 411s Selecting previously unselected package libjs-jquery-selectize.js. 411s Preparing to unpack .../141-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 411s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 411s Selecting previously unselected package libjs-jquery-ui. 411s Preparing to unpack .../142-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 411s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 411s 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package libthai-data. 412s Preparing to unpack .../148-libthai-data_0.1.30-1_all.deb ... 412s Unpacking libthai-data (0.1.30-1) ... 412s Selecting previously unselected package libthai0:amd64. 412s Preparing to unpack .../149-libthai0_0.1.30-1_amd64.deb ... 412s Unpacking libthai0:amd64 (0.1.30-1) ... 412s Selecting previously unselected package libpango-1.0-0:amd64. 412s Preparing to unpack .../150-libpango-1.0-0_1.57.0-1_amd64.deb ... 412s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ... 412s Selecting previously unselected package libpangoft2-1.0-0:amd64. 412s Preparing to unpack .../151-libpangoft2-1.0-0_1.57.0-1_amd64.deb ... 412s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ... 412s Selecting previously unselected package libpangocairo-1.0-0:amd64. 412s Preparing to unpack .../152-libpangocairo-1.0-0_1.57.0-1_amd64.deb ... 412s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ... 412s Selecting previously unselected package libpaper2:amd64. 412s Preparing to unpack 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libpcre2-dev:amd64 (10.46-1) ... 412s Selecting previously unselected package libpkgconf3:amd64. 412s Preparing to unpack .../159-libpkgconf3_1.8.1-4build1_amd64.deb ... 412s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ... 412s Selecting previously unselected package zlib1g-dev:amd64. 412s Preparing to unpack .../160-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ... 412s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 412s Selecting previously unselected package libpng-dev:amd64. 412s Preparing to unpack .../161-libpng-dev_1.6.54-1_amd64.deb ... 412s Unpacking libpng-dev:amd64 (1.6.54-1) ... 412s Selecting previously unselected package libreadline-dev:amd64. 412s Preparing to unpack .../162-libreadline-dev_8.3-3_amd64.deb ... 412s Unpacking libreadline-dev:amd64 (8.3-3) ... 412s Selecting previously unselected package libsm6:amd64. 412s Preparing to unpack .../163-libsm6_2%3a1.2.6-1build1_amd64.deb ... 412s Unpacking libsm6:amd64 (2:1.2.6-1build1) ... 412s 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node-normalize.css (8.0.1-5.1) ... 412s Selecting previously unselected package pandoc-data. 412s Preparing to unpack .../175-pandoc-data_3.1.11.1-3build1_all.deb ... 412s Unpacking pandoc-data (3.1.11.1-3build1) ... 412s Selecting previously unselected package pandoc. 412s Preparing to unpack .../176-pandoc_3.1.11.1+ds-4_amd64.deb ... 412s Unpacking pandoc (3.1.11.1+ds-4) ... 412s Selecting previously unselected package zip. 412s Preparing to unpack .../177-zip_3.0-15ubuntu3_amd64.deb ... 412s Unpacking zip (3.0-15ubuntu3) ... 412s Selecting previously unselected package unzip. 412s Preparing to unpack .../178-unzip_6.0-29ubuntu1_amd64.deb ... 412s Unpacking unzip (6.0-29ubuntu1) ... 413s Selecting previously unselected package xdg-utils. 413s Preparing to unpack .../179-xdg-utils_1.2.1-2ubuntu2_all.deb ... 413s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 413s Selecting previously unselected package r-base-core. 413s Preparing to unpack .../180-r-base-core_4.5.2-1ubuntu2_amd64.deb ... 413s Unpacking r-base-core (4.5.2-1ubuntu2) ... 413s Selecting previously unselected package liblzma-dev:amd64. 413s Preparing to unpack .../181-liblzma-dev_5.8.2-2_amd64.deb ... 413s Unpacking liblzma-dev:amd64 (5.8.2-2) ... 413s Selecting previously unselected package pkgconf-bin. 413s Preparing to unpack .../182-pkgconf-bin_1.8.1-4build1_amd64.deb ... 413s Unpacking pkgconf-bin (1.8.1-4build1) ... 413s Selecting previously unselected package pkgconf:amd64. 413s Preparing to unpack .../183-pkgconf_1.8.1-4build1_amd64.deb ... 413s Unpacking pkgconf:amd64 (1.8.1-4build1) ... 413s Selecting previously unselected package libtirpc-dev:amd64. 413s Preparing to unpack .../184-libtirpc-dev_1.3.6+ds-1_amd64.deb ... 413s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ... 413s Selecting previously unselected package r-base-dev. 413s Preparing to unpack .../185-r-base-dev_4.5.2-1ubuntu2_all.deb ... 413s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 413s Selecting previously unselected package pkg-r-autopkgtest. 413s Preparing to unpack .../186-pkg-r-autopkgtest_20250812_all.deb ... 413s Unpacking pkg-r-autopkgtest (20250812) ... 413s Selecting previously unselected package r-cran-abind. 413s Preparing to unpack .../187-r-cran-abind_1.4-8-1build1_all.deb ... 413s Unpacking r-cran-abind (1.4-8-1build1) ... 413s Selecting previously unselected package r-cran-cli. 413s Preparing to unpack .../188-r-cran-cli_3.6.4-1_amd64.deb ... 413s Unpacking r-cran-cli (3.6.4-1) ... 413s Selecting previously unselected package r-cran-generics. 413s Preparing to unpack .../189-r-cran-generics_0.1.4-1_all.deb ... 413s Unpacking r-cran-generics (0.1.4-1) ... 413s Selecting previously unselected package r-cran-glue. 413s Preparing to unpack .../190-r-cran-glue_1.8.0-1_amd64.deb ... 413s Unpacking r-cran-glue (1.8.0-1) ... 413s Selecting previously unselected package r-cran-rlang. 413s Preparing to unpack .../191-r-cran-rlang_1.1.5-3_amd64.deb ... 413s Unpacking r-cran-rlang (1.1.5-3) ... 413s 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413s Unpacking r-cran-r6 (2.6.1-1) ... 413s Selecting previously unselected package r-cran-fansi. 413s Preparing to unpack .../198-r-cran-fansi_1.0.6-2_amd64.deb ... 413s Unpacking r-cran-fansi (1.0.6-2) ... 413s Selecting previously unselected package r-cran-pkgconfig. 413s Preparing to unpack .../199-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 413s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 413s Selecting previously unselected package r-cran-tibble. 413s Preparing to unpack .../200-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 413s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 413s Selecting previously unselected package r-cran-withr. 413s Preparing to unpack .../201-r-cran-withr_3.0.2+dfsg-1_all.deb ... 413s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 413s Selecting previously unselected package r-cran-tidyselect. 413s Preparing to unpack .../202-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 413s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 413s Selecting previously unselected package r-cran-dplyr. 413s Preparing to unpack .../203-r-cran-dplyr_1.1.4-4_amd64.deb ... 413s Unpacking r-cran-dplyr (1.1.4-4) ... 413s Selecting previously unselected package r-cran-purrr. 413s Preparing to unpack .../204-r-cran-purrr_1.0.4-1_amd64.deb ... 413s Unpacking r-cran-purrr (1.0.4-1) ... 413s Selecting previously unselected package r-cran-mass. 413s Preparing to unpack .../205-r-cran-mass_7.3-65-1_amd64.deb ... 413s Unpacking r-cran-mass (7.3-65-1) ... 413s Selecting previously unselected package r-cran-class. 413s Preparing to unpack .../206-r-cran-class_7.3-23-1_amd64.deb ... 413s Unpacking r-cran-class (7.3-23-1) ... 413s Selecting previously unselected package r-cran-proxy. 413s Preparing to unpack .../207-r-cran-proxy_0.4-27-1_amd64.deb ... 413s Unpacking r-cran-proxy (0.4-27-1) ... 413s Selecting previously unselected package r-cran-e1071. 413s Preparing to unpack .../208-r-cran-e1071_1.7-17-1_amd64.deb ... 413s Unpacking r-cran-e1071 (1.7-17-1) ... 413s Selecting previously unselected package r-cran-kernsmooth. 413s Preparing to unpack .../209-r-cran-kernsmooth_2.23-26-1build1_amd64.deb ... 413s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 413s Selecting previously unselected package r-cran-classint. 413s Preparing to unpack .../210-r-cran-classint_0.4-11+dfsg-1_amd64.deb ... 413s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 413s Selecting previously unselected package r-cran-dbi. 413s Preparing to unpack .../211-r-cran-dbi_1.2.3-1build1_all.deb ... 413s Unpacking r-cran-dbi (1.2.3-1build1) ... 413s Selecting previously unselected package r-cran-littler. 413s Preparing to unpack .../212-r-cran-littler_0.3.22-1_amd64.deb ... 413s Unpacking r-cran-littler (0.3.22-1) ... 413s Selecting previously unselected package r-cran-pkgkitten. 413s Preparing to unpack .../213-r-cran-pkgkitten_0.2.4-1_all.deb ... 413s Unpacking r-cran-pkgkitten (0.2.4-1) ... 413s Selecting previously unselected package r-cran-rcpp. 413s Preparing to unpack .../214-r-cran-rcpp_1.1.0-1_amd64.deb ... 413s Unpacking r-cran-rcpp (1.1.0-1) ... 413s Selecting previously unselected package r-cran-wk. 413s Preparing to unpack .../215-r-cran-wk_0.9.4-1_amd64.deb ... 413s Unpacking r-cran-wk (0.9.4-1) ... 413s Selecting previously unselected package r-cran-s2. 413s Preparing to unpack .../216-r-cran-s2_1.1.9-1build1_amd64.deb ... 413s Unpacking r-cran-s2 (1.1.9-1build1) ... 413s Selecting previously unselected package r-cran-units. 413s Preparing to unpack .../217-r-cran-units_0.8-7+dfsg-2_amd64.deb ... 413s Unpacking r-cran-units (0.8-7+dfsg-2) ... 413s Selecting previously unselected package r-cran-sf. 413s Preparing to unpack .../218-r-cran-sf_1.0-19+dfsg-2build2_amd64.deb ... 413s Unpacking r-cran-sf (1.0-19+dfsg-2build2) ... 413s Selecting previously unselected package r-cran-areal. 413s Preparing to unpack .../219-r-cran-areal_0.1.8+dfsg-2_all.deb ... 413s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 413s Selecting previously unselected package r-cran-sys. 413s Preparing to unpack .../220-r-cran-sys_3.4.3-1_amd64.deb ... 413s Unpacking r-cran-sys (3.4.3-1) ... 413s Selecting previously unselected package r-cran-askpass. 413s Preparing to unpack .../221-r-cran-askpass_1.2.1-1_amd64.deb ... 413s Unpacking r-cran-askpass (1.2.1-1) ... 413s Selecting previously unselected package r-cran-base64enc. 413s Preparing to unpack .../222-r-cran-base64enc_0.1-3-3build1_amd64.deb ... 413s Unpacking r-cran-base64enc (0.1-3-3build1) ... 413s Selecting previously unselected package r-cran-bdsmatrix. 414s Preparing to unpack .../223-r-cran-bdsmatrix_1.3-7-1_amd64.deb ... 414s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 414s Selecting previously unselected package r-cran-brio. 414s Preparing to unpack .../224-r-cran-brio_1.1.5-1_amd64.deb ... 414s Unpacking r-cran-brio (1.1.5-1) ... 414s Selecting previously unselected package r-cran-fastmap. 414s Preparing to unpack .../225-r-cran-fastmap_1.2.0-1_amd64.deb ... 414s Unpacking r-cran-fastmap (1.2.0-1) ... 414s Selecting previously unselected package r-cran-cachem. 414s Preparing to unpack .../226-r-cran-cachem_1.1.0-1_amd64.deb ... 414s Unpacking r-cran-cachem (1.1.0-1) ... 414s Selecting previously unselected package r-cran-digest. 414s Preparing to unpack .../227-r-cran-digest_0.6.39-1_amd64.deb ... 414s Unpacking r-cran-digest (0.6.39-1) ... 414s Selecting previously unselected package r-cran-htmltools. 414s Preparing to unpack .../228-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 414s Unpacking r-cran-htmltools (0.5.8.1-1) ... 414s Selecting previously unselected package r-cran-jquerylib. 414s Preparing to unpack .../229-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 414s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 414s Selecting previously unselected package r-cran-jsonlite. 414s Preparing to unpack .../230-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 414s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 414s Selecting previously unselected package r-cran-memoise. 414s Preparing to unpack .../231-r-cran-memoise_2.0.1-1build1_all.deb ... 414s Unpacking r-cran-memoise (2.0.1-1build1) ... 414s Selecting previously unselected package r-cran-mime. 414s Preparing to unpack .../232-r-cran-mime_0.12-2_amd64.deb ... 414s Unpacking r-cran-mime (0.12-2) ... 414s Selecting previously unselected package r-cran-fs. 414s Preparing to unpack .../233-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 414s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 414s Selecting previously unselected package r-cran-rappdirs. 414s Preparing to unpack .../234-r-cran-rappdirs_0.3.3-1build1_amd64.deb ... 414s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 414s Selecting previously unselected package r-cran-sass. 414s Preparing to unpack .../235-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 414s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 414s Selecting previously unselected package r-cran-bslib. 414s Preparing to unpack .../236-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 414s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 414s Selecting previously unselected package r-cran-cairo. 414s Preparing to unpack .../237-r-cran-cairo_1.6-2-1_amd64.deb ... 414s Unpacking r-cran-cairo (1.6-2-1) ... 414s Selecting previously unselected package r-cran-ps. 414s Preparing to unpack .../238-r-cran-ps_1.9.0-1_amd64.deb ... 414s Unpacking r-cran-ps (1.9.0-1) ... 414s Selecting previously unselected package r-cran-processx. 414s Preparing to unpack .../239-r-cran-processx_3.8.6-1_amd64.deb ... 414s Unpacking r-cran-processx (3.8.6-1) ... 414s Selecting previously unselected package r-cran-callr. 414s Preparing to unpack .../240-r-cran-callr_3.7.6-1_all.deb ... 414s Unpacking r-cran-callr (3.7.6-1) ... 414s Selecting previously unselected package r-cran-cftime. 414s Preparing to unpack .../241-r-cran-cftime_1.7.2-1_all.deb ... 414s Unpacking r-cran-cftime (1.7.2-1) ... 414s Selecting previously unselected package r-cran-cluster. 414s Preparing to unpack .../242-r-cran-cluster_2.1.8.2-1_amd64.deb ... 414s Unpacking r-cran-cluster (2.1.8.2-1) ... 414s Selecting previously unselected package r-cran-clue. 414s Preparing to unpack .../243-r-cran-clue_0.3-66-1_amd64.deb ... 414s Unpacking r-cran-clue (0.3-66-1) ... 414s Selecting previously unselected package r-cran-codetools. 414s Preparing to unpack .../244-r-cran-codetools_0.2-20-1build1_all.deb ... 414s Unpacking r-cran-codetools (0.2-20-1build1) ... 414s Selecting previously unselected package r-cran-collapse. 414s Preparing to unpack .../245-r-cran-collapse_2.1.0-1_amd64.deb ... 414s Unpacking r-cran-collapse (2.1.0-1) ... 414s Selecting previously unselected package r-cran-commonmark. 414s Preparing to unpack .../246-r-cran-commonmark_1.9.5-1_amd64.deb ... 414s Unpacking r-cran-commonmark (1.9.5-1) ... 414s Selecting previously unselected package r-cran-lazyeval. 414s Preparing to unpack .../247-r-cran-lazyeval_0.2.2-1build2_amd64.deb ... 414s Unpacking r-cran-lazyeval (0.2.2-1build2) ... 414s Selecting previously unselected package r-cran-rex. 414s Preparing to unpack .../248-r-cran-rex_1.2.1-1build1_all.deb ... 414s Unpacking r-cran-rex (1.2.1-1build1) ... 414s Selecting previously unselected package r-cran-curl. 414s Preparing to unpack .../249-r-cran-curl_7.0.0+dfsg-1_amd64.deb ... 414s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 414s Selecting previously unselected package r-cran-openssl. 414s Preparing to unpack .../250-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 414s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 414s Selecting previously unselected package r-cran-httr. 414s Preparing to unpack .../251-r-cran-httr_1.4.7+dfsg-1_all.deb ... 414s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 414s Selecting previously unselected package r-cran-crayon. 414s Preparing to unpack .../252-r-cran-crayon_1.5.3-1_all.deb ... 414s Unpacking r-cran-crayon (1.5.3-1) ... 414s Selecting previously unselected package r-cran-yaml. 414s Preparing to unpack .../253-r-cran-yaml_2.3.10-1_amd64.deb ... 414s Unpacking r-cran-yaml (2.3.10-1) ... 414s Selecting previously unselected package r-cran-covr. 414s Preparing to unpack .../254-r-cran-covr_3.6.4+dfsg-1_amd64.deb ... 414s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 414s Selecting previously unselected package r-cran-cpp11. 414s Preparing to unpack .../255-r-cran-cpp11_0.5.3-1_all.deb ... 414s Unpacking r-cran-cpp11 (0.5.3-1) ... 414s Selecting previously unselected package r-cran-deldir. 414s Preparing to unpack .../256-r-cran-deldir_2.0-4-1build1_amd64.deb ... 414s Unpacking r-cran-deldir (2.0-4-1build1) ... 414s Selecting previously unselected package r-cran-desc. 414s Preparing to unpack .../257-r-cran-desc_1.4.3-1_all.deb ... 414s Unpacking r-cran-desc (1.4.3-1) ... 414s Selecting previously unselected package r-cran-diffobj. 414s Preparing to unpack .../258-r-cran-diffobj_0.3.5-1build1_amd64.deb ... 414s Unpacking r-cran-diffobj (0.3.5-1build1) ... 414s Selecting previously unselected package r-cran-evaluate. 414s Preparing to unpack .../259-r-cran-evaluate_1.0.5-1_all.deb ... 414s Unpacking r-cran-evaluate (1.0.5-1) ... 414s Selecting previously unselected package r-cran-farver. 414s Preparing to unpack .../260-r-cran-farver_2.1.2-1_amd64.deb ... 414s Unpacking r-cran-farver (2.1.2-1) ... 414s Selecting previously unselected package r-cran-fnn. 414s Preparing to unpack .../261-r-cran-fnn_1.1.4.1-1_amd64.deb ... 414s Unpacking r-cran-fnn (1.1.4.1-1) ... 414s Selecting previously unselected package r-cran-fontawesome. 414s Preparing to unpack .../262-r-cran-fontawesome_0.5.3-1_all.deb ... 414s Unpacking r-cran-fontawesome (0.5.3-1) ... 414s Selecting previously unselected package r-cran-formula. 414s Preparing to unpack .../263-r-cran-formula_1.2-5-1_all.deb ... 414s Unpacking r-cran-formula (1.2-5-1) ... 414s Selecting previously unselected package r-cran-globals. 414s Preparing to unpack .../264-r-cran-globals_0.19.0-1_all.deb ... 414s Unpacking r-cran-globals (0.19.0-1) ... 414s Selecting previously unselected package r-cran-listenv. 414s Preparing to unpack .../265-r-cran-listenv_0.10.0+dfsg-1_all.deb ... 414s Unpacking r-cran-listenv (0.10.0+dfsg-1) ... 414s Selecting previously unselected package r-cran-parallelly. 414s Preparing to unpack .../266-r-cran-parallelly_1.42.0-1_amd64.deb ... 414s Unpacking r-cran-parallelly (1.42.0-1) ... 414s Selecting previously unselected package r-cran-future. 414s Preparing to unpack .../267-r-cran-future_1.34.0+dfsg-1_all.deb ... 414s Unpacking r-cran-future (1.34.0+dfsg-1) ... 414s Selecting previously unselected package r-cran-future.apply. 414s Preparing to unpack .../268-r-cran-future.apply_1.11.3+dfsg-1_all.deb ... 414s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ... 414s Selecting previously unselected package r-cran-gtable. 414s Preparing to unpack .../269-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 414s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 414s Selecting previously unselected package r-cran-isoband. 414s Preparing to unpack .../270-r-cran-isoband_0.2.7-1_amd64.deb ... 414s Unpacking r-cran-isoband (0.2.7-1) ... 414s Selecting previously unselected package r-cran-s7. 414s Preparing to unpack .../271-r-cran-s7_0.2.0-1_amd64.deb ... 414s Unpacking r-cran-s7 (0.2.0-1) ... 414s Selecting previously unselected package r-cran-labeling. 414s Preparing to unpack .../272-r-cran-labeling_0.4.3-1_all.deb ... 414s Unpacking r-cran-labeling (0.4.3-1) ... 414s Selecting previously unselected package r-cran-rcolorbrewer. 414s Preparing to unpack .../273-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 414s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 414s Selecting previously unselected package r-cran-viridislite. 414s Preparing to unpack .../274-r-cran-viridislite_0.4.3-1_all.deb ... 414s Unpacking r-cran-viridislite (0.4.3-1) ... 414s Selecting previously unselected package r-cran-scales. 414s Preparing to unpack .../275-r-cran-scales_1.4.0-1_all.deb ... 414s Unpacking r-cran-scales (1.4.0-1) ... 414s Selecting previously unselected package r-cran-ggplot2. 414s Preparing to unpack .../276-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 414s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 414s Selecting previously unselected package r-cran-tweenr. 414s Preparing to unpack .../277-r-cran-tweenr_2.0.3-1_amd64.deb ... 414s Unpacking r-cran-tweenr (2.0.3-1) ... 414s Selecting previously unselected package r-cran-polyclip. 414s Preparing to unpack .../278-r-cran-polyclip_1.10-7-1_amd64.deb ... 414s Unpacking r-cran-polyclip (1.10-7-1) ... 415s Selecting previously unselected package r-cran-systemfonts. 415s Preparing to unpack .../279-r-cran-systemfonts_1.2.1-1_amd64.deb ... 415s Unpacking r-cran-systemfonts (1.2.1-1) ... 415s Selecting previously unselected package r-cran-lattice. 415s Preparing to unpack .../280-r-cran-lattice_0.22-7-1_amd64.deb ... 415s Unpacking r-cran-lattice (0.22-7-1) ... 415s Selecting previously unselected package r-cran-matrix. 415s Preparing to unpack .../281-r-cran-matrix_1.7-4-1_amd64.deb ... 415s Unpacking r-cran-matrix (1.7-4-1) ... 415s Selecting previously unselected package r-cran-rcppeigen. 415s Preparing to unpack .../282-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 415s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 415s Selecting previously unselected package r-cran-ggforce. 415s Preparing to unpack .../283-r-cran-ggforce_0.4.2-1_amd64.deb ... 415s Unpacking r-cran-ggforce (0.4.2-1) ... 415s Selecting previously unselected package r-cran-stringi. 415s Preparing to unpack .../284-r-cran-stringi_1.8.4-1build2_amd64.deb ... 415s Unpacking r-cran-stringi (1.8.4-1build2) ... 415s Selecting previously unselected package r-cran-stringr. 415s Preparing to unpack .../285-r-cran-stringr_1.5.1-1_all.deb ... 415s Unpacking r-cran-stringr (1.5.1-1) ... 415s Selecting previously unselected package r-cran-ggthemes. 415s Preparing to unpack .../286-r-cran-ggthemes_5.2.0-1_all.deb ... 415s Unpacking r-cran-ggthemes (5.2.0-1) ... 415s Selecting previously unselected package r-cran-goftest. 415s Preparing to unpack .../287-r-cran-goftest_1.2-3-1build1_amd64.deb ... 415s Unpacking r-cran-goftest (1.2-3-1build1) ... 415s Selecting previously unselected package r-cran-gridextra. 415s Preparing to unpack .../288-r-cran-gridextra_2.3-3build2_all.deb ... 415s Unpacking r-cran-gridextra (2.3-3build2) ... 415s Selecting previously unselected package r-cran-xfun. 415s Preparing to unpack .../289-r-cran-xfun_0.55+dfsg-1_amd64.deb ... 415s Unpacking r-cran-xfun (0.55+dfsg-1) ... 415s Selecting previously unselected package r-cran-highr. 415s Preparing to unpack .../290-r-cran-highr_0.11+dfsg-1_all.deb ... 415s Unpacking r-cran-highr (0.11+dfsg-1) ... 415s Selecting previously unselected package r-cran-later. 415s Preparing to unpack .../291-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 415s Unpacking r-cran-later (1.4.1+dfsg-1) ... 415s Selecting previously unselected package r-cran-promises. 415s Preparing to unpack .../292-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 415s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 415s Selecting previously unselected package r-cran-httpuv. 415s Preparing to unpack .../293-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 415s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 415s Selecting previously unselected package r-cran-intervals. 415s Preparing to unpack .../294-r-cran-intervals_0.15.5-1_amd64.deb ... 415s Unpacking r-cran-intervals (0.15.5-1) ... 415s Selecting previously unselected package libjs-mathjax. 415s Preparing to unpack .../295-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 415s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 415s Selecting previously unselected package r-cran-knitr. 415s Preparing to unpack .../296-r-cran-knitr_1.51+dfsg-1_all.deb ... 415s Unpacking r-cran-knitr (1.51+dfsg-1) ... 415s Selecting previously unselected package r-cran-zoo. 415s Preparing to unpack .../297-r-cran-zoo_1.8-15-1_amd64.deb ... 415s Unpacking r-cran-zoo (1.8-15-1) ... 415s Selecting previously unselected package r-cran-lmtest. 415s Preparing to unpack .../298-r-cran-lmtest_0.9.40-1build1_amd64.deb ... 415s Unpacking r-cran-lmtest (0.9.40-1build1) ... 415s Selecting previously unselected package r-cran-lwgeom. 415s Preparing to unpack .../299-r-cran-lwgeom_0.2-14-1_amd64.deb ... 415s Unpacking r-cran-lwgeom (0.2-14-1) ... 415s Selecting previously unselected package r-cran-maps. 415s Preparing to unpack .../300-r-cran-maps_3.4.2.1-1_amd64.deb ... 415s Unpacking r-cran-maps (3.4.2.1-1) ... 415s Selecting previously unselected package r-cran-mapdata. 415s Preparing to unpack .../301-r-cran-mapdata_2.3.1-1_amd64.deb ... 415s Unpacking r-cran-mapdata (2.3.1-1) ... 415s Selecting previously unselected package r-cran-misctools. 415s Preparing to unpack .../302-r-cran-misctools_0.6-28-1_all.deb ... 415s Unpacking r-cran-misctools (0.6-28-1) ... 415s Selecting previously unselected package r-cran-sandwich. 415s Preparing to unpack .../303-r-cran-sandwich_3.1-1-1build1_all.deb ... 415s Unpacking r-cran-sandwich (3.1-1-1build1) ... 415s Selecting previously unselected package r-cran-maxlik. 415s Preparing to unpack .../304-r-cran-maxlik_1.5-2.2-1_all.deb ... 415s Unpacking r-cran-maxlik (1.5-2.2-1) ... 415s Selecting previously unselected package r-cran-nlme. 415s Preparing to unpack .../305-r-cran-nlme_3.1.168-1_amd64.deb ... 415s Unpacking r-cran-nlme (3.1.168-1) ... 415s Selecting previously unselected package r-cran-mgcv. 416s Preparing to unpack .../306-r-cran-mgcv_1.9-4-1_amd64.deb ... 416s Unpacking r-cran-mgcv (1.9-4-1) ... 416s Selecting previously unselected package r-cran-rnetcdf. 416s Preparing to unpack .../307-r-cran-rnetcdf_2.9-2-1_amd64.deb ... 416s Unpacking r-cran-rnetcdf (2.9-2-1) ... 416s Selecting previously unselected package r-cran-tidyr. 416s Preparing to unpack .../308-r-cran-tidyr_1.3.1-1_amd64.deb ... 416s Unpacking r-cran-tidyr (1.3.1-1) ... 416s Selecting previously unselected package r-cran-ncmeta. 416s Preparing to unpack .../309-r-cran-ncmeta_0.4.0-1_all.deb ... 416s Unpacking r-cran-ncmeta (0.4.0-1) ... 416s Selecting previously unselected package r-cran-stars. 416s Preparing to unpack .../310-r-cran-stars_0.7-0-1_all.deb ... 416s Unpacking r-cran-stars (0.7-0-1) ... 416s Selecting previously unselected package r-cran-ncdfgeom. 416s Preparing to unpack .../311-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 416s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 416s Selecting previously unselected package r-cran-pbapply. 416s Preparing to unpack .../312-r-cran-pbapply_1.7-2-1_all.deb ... 416s Unpacking r-cran-pbapply (1.7-2-1) ... 416s Selecting previously unselected package r-cran-pkgbuild. 416s Preparing to unpack .../313-r-cran-pkgbuild_1.4.8-1_all.deb ... 416s Unpacking r-cran-pkgbuild (1.4.8-1) ... 416s Selecting previously unselected package r-cran-rprojroot. 416s Preparing to unpack .../314-r-cran-rprojroot_2.1.1-1_all.deb ... 416s Unpacking r-cran-rprojroot (2.1.1-1) ... 416s Selecting previously unselected package r-cran-pkgload. 416s Preparing to unpack .../315-r-cran-pkgload_1.4.1-1_all.deb ... 416s Unpacking r-cran-pkgload (1.4.1-1) ... 416s Selecting previously unselected package r-cran-rbibutils. 416s Preparing to unpack .../316-r-cran-rbibutils_2.3-1_amd64.deb ... 416s Unpacking r-cran-rbibutils (2.3-1) ... 416s Selecting previously unselected package r-cran-rdpack. 416s Preparing to unpack .../317-r-cran-rdpack_2.6.3-1_all.deb ... 416s Unpacking r-cran-rdpack (2.6.3-1) ... 416s Selecting previously unselected package r-cran-plm. 416s Preparing to unpack .../318-r-cran-plm_2.6-7-1_all.deb ... 416s Unpacking r-cran-plm (2.6-7-1) ... 416s Selecting previously unselected package r-cran-praise. 416s Preparing to unpack .../319-r-cran-praise_1.0.0-4build2_all.deb ... 416s Unpacking r-cran-praise (1.0.0-4build2) ... 416s Selecting previously unselected package r-cran-randomforest. 416s Preparing to unpack .../320-r-cran-randomforest_4.7-1.2-1_amd64.deb ... 416s Unpacking r-cran-randomforest (4.7-1.2-1) ... 416s Selecting previously unselected package r-cran-sp. 416s Preparing to unpack .../321-r-cran-sp_1%3a2.2-0+dfsg-1_amd64.deb ... 416s Unpacking r-cran-sp (1:2.2-0+dfsg-1) ... 416s Selecting previously unselected package r-cran-terra. 416s Preparing to unpack .../322-r-cran-terra_1.8-70-1build2_amd64.deb ... 416s Unpacking r-cran-terra (1.8-70-1build2) ... 416s Selecting previously unselected package r-cran-raster. 416s Preparing to unpack .../323-r-cran-raster_3.6-31-2_amd64.deb ... 416s Unpacking r-cran-raster (3.6-31-2) ... 416s Selecting previously unselected package r-cran-tinytex. 416s Preparing to unpack .../324-r-cran-tinytex_0.58-1_all.deb ... 416s Unpacking r-cran-tinytex (0.58-1) ... 416s Selecting previously unselected package libjs-modernizr. 416s Preparing to unpack .../325-libjs-modernizr_3.13.0-0.1build1_all.deb ... 416s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 416s Selecting previously unselected package r-cran-xtable. 416s Preparing to unpack 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(3.3-1-1) ... 419s Setting up libheif-plugin-aomdec:amd64 (1.21.2-1) ... 419s Setting up libheif-plugin-libde265:amd64 (1.21.2-1) ... 419s Setting up libheif1:amd64 (1.21.2-1) ... 419s Setting up libgdal38:amd64 (3.12.1+dfsg-1) ... 419s Setting up r-cran-terra (1.8-70-1build2) ... 419s Setting up r-cran-sf (1.0-19+dfsg-2build2) ... 419s Setting up r-cran-stars (0.7-0-1) ... 419s Setting up r-cran-areal (0.1.8+dfsg-2) ... 419s Setting up r-cran-raster (3.6-31-2) ... 419s Setting up r-cran-lwgeom (0.2-14-1) ... 419s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... 419s Processing triggers for libc-bin (2.42-2ubuntu4) ... 419s Processing triggers for man-db (2.13.1-1build1) ... 420s Processing triggers for install-info (7.2-5) ... 422s autopkgtest [06:02:52]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 422s autopkgtest [06:02:52]: test pkg-r-autopkgtest: [----------------------- 422s Test: Try to load the R library stars 422s 422s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 422s Copyright (C) 2025 The R Foundation for Statistical Computing 422s Platform: x86_64-pc-linux-gnu 422s 422s R is free software and comes with ABSOLUTELY NO WARRANTY. 422s You are welcome to redistribute it under certain conditions. 422s Type 'license()' or 'licence()' for distribution details. 422s 422s R is a collaborative project with many contributors. 422s Type 'contributors()' for more information and 422s 'citation()' on how to cite R or R packages in publications. 422s 422s Type 'demo()' for some demos, 'help()' for on-line help, or 422s 'help.start()' for an HTML browser interface to help. 422s Type 'q()' to quit R. 422s 422s > library('stars') 422s Loading required package: abind 422s Loading required package: sf 423s Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.0; sf_use_s2() is TRUE 423s > 423s autopkgtest [06:02:53]: test pkg-r-autopkgtest: -----------------------] 423s autopkgtest [06:02:53]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 423s pkg-r-autopkgtest PASS 424s autopkgtest [06:02:54]: @@@@@@@@@@@@@@@@@@@@ summary 424s run-unit-test PASS 424s pkg-r-autopkgtest PASS