0s autopkgtest [05:50:52]: starting date and time: 2026-02-10 05:50:52+0000
  0s autopkgtest [05:50:52]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [05:50:52]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wzd7enlm/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-cran-seurat --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-26.secgroup --name adt-resolute-amd64-r-cran-seurat-20260210-055052-juju-7f2275-prod-proposed-migration-environment-20-a0885efb-d52e-4c04-a675-9d21a2ef4f4d --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  4s Creating nova instance adt-resolute-amd64-r-cran-seurat-20260210-055052-juju-7f2275-prod-proposed-migration-environment-20-a0885efb-d52e-4c04-a675-9d21a2ef4f4d from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 77s autopkgtest [05:52:09]: testbed dpkg architecture: amd64
 77s autopkgtest [05:52:09]: testbed apt version: 3.1.14
 77s autopkgtest [05:52:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 77s autopkgtest [05:52:09]: testbed release detected to be: None
 78s autopkgtest [05:52:10]: updating testbed package index (apt update)
 78s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 78s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 78s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 78s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 78s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [178 kB]
 78s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB]
 78s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1727 kB]
 79s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [266 kB]
 79s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [219 kB]
 79s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [6184 B]
 79s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B]
 79s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1787 kB]
 79s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [792 kB]
 79s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.5 kB]
 79s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B]
 79s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB]
 79s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 80s Fetched 5197 kB in 1s (3673 kB/s)
 80s Reading package lists...
 81s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 81s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 81s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 81s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 82s Reading package lists...
 82s Reading package lists...
 82s Building dependency tree...
 82s Reading state information...
 82s Calculating upgrade...
 82s The following package was automatically installed and is no longer required:
 82s   libpython3.13
 82s Use 'sudo apt autoremove' to remove it.
 82s The following NEW packages will be installed:
 82s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 82s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 82s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 82s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 82s The following packages will be upgraded:
 82s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 82s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 82s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 82s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 82s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbrotli1 libbsd0
 82s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 82s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 82s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 82s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 82s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 82s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 82s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 82s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 82s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 82s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 82s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 82s 91 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 82s Need to get 237 MB of archives.
 82s After this operation, 339 MB of additional disk space will be used.
 82s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 82s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 82s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 82s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 82s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 82s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 82s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 82s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 82s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 82s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 82s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 82s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 82s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 82s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 82s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 82s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 82s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 82s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 82s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 82s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 82s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 82s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 82s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 82s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 82s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 82s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 82s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 82s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 82s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 82s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 82s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 82s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 82s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 82s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 82s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 82s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 82s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 82s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 82s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 82s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 82s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 82s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 82s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 82s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 82s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 82s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 82s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 82s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 82s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 82s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 82s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 82s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 82s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 82s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 82s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 82s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 82s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 82s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 82s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 82s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 83s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 83s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 83s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 83s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 83s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 83s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 83s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 83s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 83s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 83s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 83s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 83s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli1 amd64 1.2.0-3 [343 kB]
 83s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 83s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 83s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 83s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 83s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 83s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 83s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 83s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 83s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 83s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 83s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 86s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 86s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 86s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 86s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 86s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 86s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 86s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 86s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 86s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 86s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 86s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 87s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 87s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 87s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 87s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 87s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 87s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 87s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 87s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 87s Fetched 237 MB in 5s (52.2 MB/s)
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 87s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 87s Setting up debianutils (5.23.2build1) ...
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 87s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
 87s Setting up dash (0.5.12-12ubuntu3) ...
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
 87s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
 87s Setting up findutils (4.10.0-3build2) ...
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
 87s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
 87s Setting up sed (4.9-2build3) ...
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
 87s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
 87s Setting up tar (1.35+dfsg-3.1build2) ...
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 95s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
 95s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
 95s amd64-microcode: microcode will be updated at next boot
 95s Setting up man-db (2.13.1-1build1) ...
 95s Updating database of manual pages ...
 96s man-db.service is a disabled or a static unit not running, not starting it.
 96s Setting up libjansson4:amd64 (2.14-2build4) ...
 96s Setting up libglib2.0-data (2.87.2-2) ...
 96s Setting up pollinate (4.33-4ubuntu5) ...
107s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
107s Setting up libwrap0:amd64 (7.6.q-36build2) ...
107s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
108s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
108s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
108s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
108s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
108s Setting up patch (2.8-2build1) ...
108s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
108s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
108s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
108s Setting up lsof (4.99.4+dfsg-2build2) ...
108s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
108s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
108s Setting up dracut-install (109-11ubuntu1) ...
108s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
108s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
108s Setting up pnp.ids (0.394-1build1) ...
108s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
108s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
108s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
108s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
108s Setting up mawk (1.3.4.20260129-1) ...
108s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
108s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
108s Setting up linux-image-virtual (6.19.0-3.3) ...
108s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
108s Setting up libbsd0:amd64 (0.12.2-2build2) ...
108s Setting up libdrm-common (2.4.131-1) ...
108s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
108s Setting up dbus-bin (1.16.2-2ubuntu3) ...
108s Setting up libonig5:amd64 (6.9.10-1build1) ...
108s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
108s Setting up ethtool (1:6.15-3build1) ...
108s Setting up python3-referencing (0.36.2-1ubuntu2) ...
108s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
108s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
108s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
108s Setting up tcpdump (4.99.5-2ubuntu3) ...
108s Setting up linux-image-generic (6.19.0-3.3) ...
108s Setting up wget (1.25.0-2ubuntu4) ...
108s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
108s Setting up iptables (1.8.11-2ubuntu3) ...
108s Setting up iproute2 (6.18.0-1ubuntu1) ...
109s Setting up linux-headers-generic (6.19.0-3.3) ...
109s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
109s Setting up hwdata (0.394-1build1) ...
109s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
109s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
109s No schema files found: doing nothing.
109s Setting up dbus (1.16.2-2ubuntu3) ...
109s A reboot is required to replace the running dbus-daemon.
109s Please reboot the system when convenient.
109s Setting up shared-mime-info (2.4-5build3) ...
110s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
110s Setting up pciutils (1:3.14.0-1build2) ...
110s Setting up python3-markdown-it (3.0.0-3build1) ...
110s Setting up libdrm2:amd64 (2.4.131-1) ...
110s Setting up libpython3.14:amd64 (3.14.2-1) ...
110s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
110s Setting up linux-tools-common (6.19.0-3.3) ...
110s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
110s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
110s Setting up apt (3.1.15) ...
110s Setting up linux-headers-virtual (6.19.0-3.3) ...
110s Setting up linux-generic (6.19.0-3.3) ...
110s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
110s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
110s Setting up ubuntu-standard (1.564) ...
110s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
110s Setting up linux-virtual (6.19.0-3.3) ...
110s Setting up linux-perf (6.19.0-3.3) ...
110s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
110s Processing triggers for debianutils (5.23.2build1) ...
110s Processing triggers for install-info (7.2-5) ...
110s Processing triggers for initramfs-tools (0.150ubuntu7) ...
110s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
115s Processing triggers for libc-bin (2.42-2ubuntu4) ...
115s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
115s /etc/kernel/postinst.d/initramfs-tools:
115s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
119s /etc/kernel/postinst.d/zz-update-grub:
119s Sourcing file `/etc/default/grub'
119s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
119s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
119s Generating grub configuration file ...
119s Found linux image: /boot/vmlinuz-6.19.0-3-generic
119s Found initrd image: /boot/initrd.img-6.19.0-3-generic
119s Found linux image: /boot/vmlinuz-6.18.0-9-generic
119s Found initrd image: /boot/initrd.img-6.18.0-9-generic
119s Warning: os-prober will not be executed to detect other bootable partitions.
119s Systems on them will not be added to the GRUB boot configuration.
119s Check GRUB_DISABLE_OS_PROBER documentation entry.
119s Adding boot menu entry for UEFI Firmware Settings ...
119s done
119s autopkgtest [05:52:51]: upgrading testbed (apt dist-upgrade and autopurge)
120s Reading package lists...
120s Building dependency tree...
120s Reading state information...
120s Calculating upgrade...
120s The following package was automatically installed and is no longer required:
120s   libpython3.13
120s Use 'sudo apt autoremove' to remove it.
120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
120s Reading package lists...
121s Building dependency tree...
121s Reading state information...
121s Solving dependencies...
121s The following packages will be REMOVED:
121s   libpython3.13*
121s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
121s After this operation, 7599 kB disk space will be freed.
121s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
121s Removing libpython3.13:amd64 (3.13.11-1) ...
121s Processing triggers for libc-bin (2.42-2ubuntu4) ...
121s autopkgtest [05:52:53]: rebooting testbed after setup commands that affected boot
149s autopkgtest [05:53:21]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
151s autopkgtest [05:53:23]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-seurat
152s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-seurat 5.2.1-5 (dsc) [3404 B]
152s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-seurat 5.2.1-5 (tar) [2088 kB]
152s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-seurat 5.2.1-5 (diff) [5020 B]
152s gpgv: Signature made Mon Apr  7 04:54:46 2025 UTC
152s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
152s gpgv:                issuer "plessy@debian.org"
152s gpgv: Can't check signature: No public key
152s dpkg-source: warning: cannot verify inline signature for ./r-cran-seurat_5.2.1-5.dsc: no acceptable signature found
152s autopkgtest [05:53:24]: testing package r-cran-seurat version 5.2.1-5
154s autopkgtest [05:53:26]: build not needed
156s autopkgtest [05:53:28]: test run-unit-test: preparing testbed
156s Reading package lists...
156s Building dependency tree...
156s Reading state information...
157s Solving dependencies...
157s The following NEW packages will be installed:
157s   comerr-dev fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
157s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data
157s   gdal-plugins hdf5-helpers javascript-common krb5-multidev libabsl20260107
157s   libaec-dev libaec0 libamd3 libaom3 libarmadillo15 libarpack2t64 libasan8
157s   libavif16 libblas3 libblosc1 libboost-dev libboost1.90-dev libbrotli-dev
157s   libc-dev-bin libc6-dev libcairo2 libcfitsio10t64 libcolamd3 libcrypt-dev
157s   libcurl4-openssl-dev libdatrie1 libdav1d7 libde265-0 libdeflate0
157s   libevent-2.1-7t64 libfftw3-double3 libfontconfig1 libfreexl1 libfyba0t64
157s   libgav1-2 libgcc-15-dev libgdal38 libgeos-c1t64 libgeos3.14.1 libgeotiff5
157s   libgfortran5 libgif7 libglpk40 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64
157s   libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgpgmepp6t64
157s   libgraphite2-3 libgssrpc4t64 libharfbuzz0b libhdf4-0 libhdf5-310
157s   libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310
157s   libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libheif-plugin-aomdec
157s   libheif-plugin-libde265 libheif1 libhnswlib-dev libhwasan0 libhwy1t64
157s   libice6 libidn2-dev libitm1 libjbig0 libjpeg-dev libjpeg-turbo8
157s   libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4
157s   libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
157s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
157s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
157s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11
157s   libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkmlbase1t64
157s   libkmldom1t64 libkmlengine1t64 libkrb5-dev liblapack3 liblcms2-2 libldap-dev
157s   liblerc4 liblsan0 libltdl7 liblua5.4-0 libminizip1t64 libmuparser2v5
157s   libmysqlclient24 libnetcdf22 libnghttp2-dev libodbc2 libodbcinst2
157s   libopenjp2-7 libp11-kit-dev libpango-1.0-0 libpangocairo-1.0-0
157s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libpkgconf3
157s   libpoppler147 libpq5 libproj25 libpsl-dev libqhull-r8.0 libquadmath0
157s   librtmp-dev librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64
157s   libssh2-1-dev libssl-dev libstdc++-15-dev libsuitesparseconfig7 libsuperlu7
157s   libsz2 libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6
157s   libtsan2 libubsan1 libudunits2-0 libudunits2-data libunbound8 liburiparser1
157s   libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1
157s   libxss1 libxt6t64 libyuv0 libzstd-dev linux-libc-dev mysql-common nettle-dev
157s   node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data
157s   pkgconf pkgconf-bin proj-data r-base-core r-bioc-assorthead r-bioc-beachmat
157s   r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel
157s   r-bioc-biocviews r-bioc-biostrings r-bioc-delayedarray
157s   r-bioc-delayedmatrixstats r-bioc-deseq2 r-bioc-genomeinfodb
157s   r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges
157s   r-bioc-glmgampoi r-bioc-graph r-bioc-hdf5array r-bioc-hsmmsinglecell
157s   r-bioc-iranges r-bioc-limma r-bioc-matrixgenerics r-bioc-monocle
157s   r-bioc-multtest r-bioc-rbgl r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib
157s   r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays
157s   r-bioc-s4vectors r-bioc-singlecellexperiment r-bioc-sparsearray
157s   r-bioc-sparsematrixstats r-bioc-summarizedexperiment r-bioc-ucsc.utils
157s   r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-ape r-cran-askpass
157s   r-cran-base64enc r-cran-beeswarm r-cran-bh r-cran-biocmanager r-cran-bit
157s   r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem
157s   r-cran-cairo r-cran-callr r-cran-caret r-cran-catools r-cran-class
157s   r-cran-classint r-cran-cli r-cran-clock r-cran-cluster r-cran-codetools
157s   r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conquer
157s   r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl
157s   r-cran-data.table r-cran-dbi r-cran-ddrtree r-cran-deldir r-cran-deoptimr
157s   r-cran-desc r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dotcall64
157s   r-cran-dplyr r-cran-dqrng r-cran-e1071 r-cran-evaluate r-cran-fansi
157s   r-cran-farver r-cran-fastdummies r-cran-fastica r-cran-fastmap
157s   r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome r-cran-foreach
157s   r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options
157s   r-cran-future r-cran-future.apply r-cran-gdata r-cran-generics
157s   r-cran-ggbeeswarm r-cran-ggplot2 r-cran-ggrastr r-cran-ggrepel
157s   r-cran-ggridges r-cran-globals r-cran-glue r-cran-goftest r-cran-gower
157s   r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools r-cran-hardhat
157s   r-cran-hdf5r r-cran-here r-cran-highr r-cran-htmltools r-cran-htmlwidgets
157s   r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph r-cran-ipred r-cran-irlba
157s   r-cran-isoband r-cran-iterators r-cran-jquerylib r-cran-jsonlite
157s   r-cran-kernlab r-cran-kernsmooth r-cran-knitr r-cran-labeling
157s   r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava r-cran-lazyeval
157s   r-cran-leidenbase r-cran-lifecycle r-cran-listenv r-cran-littler
157s   r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr r-cran-mass
157s   r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels r-cran-matrixstats
157s   r-cran-memoise r-cran-metap r-cran-mime r-cran-miniui r-cran-mixtools
157s   r-cran-mnormt r-cran-modelmetrics r-cran-multcomp r-cran-mutoss
157s   r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv r-cran-openssl
157s   r-cran-parallelly r-cran-patchwork r-cran-pbapply r-cran-pheatmap
157s   r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten
157s   r-cran-pkgload r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png
157s   r-cran-polyclip r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim
157s   r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr
157s   r-cran-qqconf r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils
157s   r-cran-r6 r-cran-ragg r-cran-rann r-cran-rappdirs r-cran-rbibutils
157s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo
157s   r-cran-rcppeigen r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml
157s   r-cran-rcurl r-cran-rdpack r-cran-recipes r-cran-reshape2 r-cran-restfulr
157s   r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown
157s   r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra
157s   r-cran-rsvd r-cran-rtsne r-cran-runit r-cran-s2 r-cran-s7 r-cran-sandwich
157s   r-cran-sass r-cran-scales r-cran-scattermore r-cran-sctransform
157s   r-cran-segmented r-cran-seurat r-cran-seuratobject r-cran-sf r-cran-shape
157s   r-cran-shiny r-cran-shinyjs r-cran-sitmo r-cran-slam r-cran-sn r-cran-snow
157s   r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-sparsevctrs
157s   r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom
157s   r-cran-spatstat.random r-cran-spatstat.sparse r-cran-spatstat.univar
157s   r-cran-spatstat.utils r-cran-squarem r-cran-statmod r-cran-stringi
157s   r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor
157s   r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-th.data
157s   r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange
157s   r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-units r-cran-utf8
157s   r-cran-uwot r-cran-vctrs r-cran-vgam r-cran-vipor r-cran-viridis
157s   r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk r-cran-xfun
157s   r-cran-xml r-cran-xtable r-cran-yaml r-cran-zoo rpcsvc-proto unixodbc-common
157s   unzip x11-common xdg-utils zip zlib1g-dev
157s 0 upgraded, 483 newly installed, 0 to remove and 0 not upgraded.
157s Need to get 496 MB of archives.
157s After this operation, 1365 MB of additional disk space will be used.
157s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
157s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
157s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
157s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
157s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
157s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
157s Get:7 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
157s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
157s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-data all 3.12.1+dfsg-1 [278 kB]
157s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-plugins amd64 3.12.1+dfsg-1 [26.8 kB]
157s Get:11 http://ftpmaster.internal/ubuntu resolute/universe amd64 hdf5-helpers amd64 1.14.6+repack-2 [17.3 kB]
157s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
157s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
157s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
157s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
157s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
158s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
158s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 comerr-dev amd64 2.1-1.47.2-3ubuntu2 [45.0 kB]
158s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libgssrpc4t64 amd64 1.22.1-2 [57.9 kB]
158s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5clnt-mit12 amd64 1.22.1-2 [40.2 kB]
158s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libkdb5-10t64 amd64 1.22.1-2 [41.6 kB]
158s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5srv-mit12 amd64 1.22.1-2 [55.0 kB]
158s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 krb5-multidev amd64 1.22.1-2 [126 kB]
158s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libabsl20260107 amd64 20260107.0-1 [587 kB]
158s Get:25 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB]
158s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
158s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 libsuitesparseconfig7 amd64 1:7.12.1+dfsg-1 [22.0 kB]
158s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd3 amd64 1:7.12.1+dfsg-1 [35.8 kB]
158s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libaom3 amd64 3.13.1-2 [1970 kB]
158s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
158s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
159s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
159s Get:33 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2t64 amd64 3.9.1-6 [108 kB]
159s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu7 amd64 7.0.1+dfsg1-2 [186 kB]
159s Get:35 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarmadillo15 amd64 1:15.2.1+dfsg-2 [109 kB]
159s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
159s Get:37 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdav1d7 amd64 1.5.3-1 [626 kB]
159s Get:38 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgav1-2 amd64 0.20.0-2build1 [402 kB]
159s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
159s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
159s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libyuv0 amd64 0.0.1922.20260106-1 [184 kB]
159s Get:42 http://ftpmaster.internal/ubuntu resolute/universe amd64 libavif16 amd64 1.3.0-1ubuntu3 [117 kB]
159s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.8 kB]
159s Get:44 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc1 amd64 1.21.5+ds-2 [35.8 kB]
159s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
159s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
159s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
160s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
160s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
160s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
160s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
160s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
160s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB]
161s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B]
161s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli-dev amd64 1.2.0-3 [364 kB]
161s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
161s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
161s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
161s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
161s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
161s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcfitsio10t64 amd64 4.6.3-1 [549 kB]
161s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libcolamd3 amd64 1:7.12.1+dfsg-1 [27.4 kB]
161s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-dev amd64 2.3.8-4build1 [121 kB]
161s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libkrb5-dev amd64 1.22.1-2 [11.9 kB]
161s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libldap-dev amd64 2.6.10+dfsg-1ubuntu5 [315 kB]
161s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
161s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
161s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
161s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libnghttp2-dev amd64 1.64.0-1.1ubuntu1 [120 kB]
161s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libpsl-dev amd64 0.21.2-1.1build2 [78.7 kB]
161s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5ubuntu1 [9956 B]
161s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5ubuntu1 [342 kB]
161s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10build2 [145 kB]
161s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libunbound8 amd64 1.24.2-1ubuntu1 [462 kB]
161s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-dane0t64 amd64 3.8.10-3ubuntu1 [24.5 kB]
161s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-openssl27t64 amd64 3.8.10-3ubuntu1 [24.8 kB]
161s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libp11-kit-dev amd64 0.25.10-1 [29.3 kB]
161s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6-dev amd64 4.21.0-2 [92.4 kB]
161s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 nettle-dev amd64 3.10.2-1 [1176 kB]
161s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls28-dev amd64 3.8.10-3ubuntu1 [1096 kB]
161s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
161s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-3 [69.2 kB]
161s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libssl-dev amd64 3.5.3-1ubuntu2 [2936 kB]
161s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libssh2-1-dev amd64 1.11.1-1build1 [288 kB]
161s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
161s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 libcurl4-openssl-dev amd64 8.18.0-1ubuntu1 [543 kB]
161s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
161s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 libde265-0 amd64 1.0.16-1build1 [172 kB]
161s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
161s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build2 [860 kB]
161s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfyba0t64 amd64 4.1.1-11build2 [120 kB]
161s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [23.5 kB]
161s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfreexl1 amd64 2.0.0-1build3 [42.9 kB]
161s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos3.14.1 amd64 3.14.1-2 [976 kB]
161s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos-c1t64 amd64 3.14.1-2 [116 kB]
161s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 proj-data all 9.7.1-1 [7950 kB]
162s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
162s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
162s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
162s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
162s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
162s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 libproj25 amd64 9.7.1-1 [1499 kB]
162s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeotiff5 amd64 1.7.4-1build1 [61.5 kB]
162s Get:104 http://ftpmaster.internal/ubuntu resolute/main amd64 libgif7 amd64 5.2.2-1ubuntu3 [36.0 kB]
162s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB]
162s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf4-0 amd64 4.3.1-2 [318 kB]
162s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB]
162s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-aomdec amd64 1.21.2-1 [14.2 kB]
162s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-libde265 amd64 1.21.2-1 [9978 B]
162s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif1 amd64 1.21.2-1 [544 kB]
162s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwy1t64 amd64 1.3.0-2 [768 kB]
162s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 liblcms2-2 amd64 2.17-1 [170 kB]
162s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libjxl0.11 amd64 0.11.1-6ubuntu1 [1122 kB]
162s Get:114 http://ftpmaster.internal/ubuntu resolute/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB]
162s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlbase1t64 amd64 1.3.0-13 [51.7 kB]
162s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmldom1t64 amd64 1.3.0-13 [156 kB]
162s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlengine1t64 amd64 1.3.0-13 [74.1 kB]
162s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmuparser2v5 amd64 2.3.4-2 [143 kB]
162s Get:119 http://ftpmaster.internal/ubuntu resolute/main amd64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B]
162s Get:120 http://ftpmaster.internal/ubuntu resolute/main amd64 libmysqlclient24 amd64 8.4.8-0ubuntu1 [1258 kB]
162s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB]
162s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnetcdf22 amd64 1:4.9.3-1build1 [561 kB]
162s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl7 amd64 2.5.4-9 [43.7 kB]
162s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbc2 amd64 2.3.14-1 [160 kB]
162s Get:125 http://ftpmaster.internal/ubuntu resolute/main amd64 unixodbc-common all 2.3.14-1 [8792 B]
162s Get:126 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbcinst2 amd64 2.3.14-1 [32.0 kB]
162s Get:127 http://ftpmaster.internal/ubuntu resolute/main amd64 libopenjp2-7 amd64 2.5.4-1 [188 kB]
162s Get:128 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpgmepp6t64 amd64 1.24.2-3ubuntu2 [124 kB]
162s Get:129 http://ftpmaster.internal/ubuntu resolute/main amd64 libpoppler147 amd64 25.03.0-11.1 [1224 kB]
162s Get:130 http://ftpmaster.internal/ubuntu resolute/main amd64 libpq5 amd64 18.1-2 [155 kB]
162s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqhull-r8.0 amd64 2020.2-8 [197 kB]
162s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 librttopo1 amd64 1.1.0-4build1 [189 kB]
162s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspatialite8t64 amd64 5.1.0-3ubuntu1 [1927 kB]
162s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3build2 [991 kB]
162s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgdal38 amd64 3.12.1+dfsg-1 [11.4 MB]
162s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 libglpk40 amd64 5.0-2 [380 kB]
162s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
162s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
162s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-cpp-310 amd64 1.14.6+repack-2 [125 kB]
162s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-fortran-310 amd64 1.14.6+repack-2 [106 kB]
162s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-fortran-310 amd64 1.14.6+repack-2 [32.1 kB]
162s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-cpp-310 amd64 1.14.6+repack-2 [11.9 kB]
162s Get:143 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
162s Get:144 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
162s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
162s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec-dev amd64 1.1.5-1 [23.5 kB]
163s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-dev amd64 1.14.6+repack-2 [3386 kB]
163s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhnswlib-dev all 0.8.0-1build4 [24.4 kB]
163s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
163s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
163s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
163s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
163s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
163s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
163s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
163s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
163s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
163s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
163s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
163s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
163s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
163s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
163s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
163s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
163s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
163s Get:166 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
163s Get:167 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
163s Get:168 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
163s Get:169 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
163s Get:170 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
163s Get:171 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
163s Get:172 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
163s Get:173 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
163s Get:174 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
163s Get:175 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
163s Get:176 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
163s Get:177 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
163s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-data all 2.2.28-8 [19.3 kB]
163s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-0 amd64 2.2.28-8 [54.6 kB]
163s Get:180 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
163s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
163s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
163s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
163s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
163s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
163s Get:186 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
163s Get:187 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
163s Get:188 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
163s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
164s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB]
164s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB]
164s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB]
164s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
164s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
164s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB]
164s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB]
164s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB]
164s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
164s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
164s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB]
164s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
164s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB]
164s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB]
164s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB]
164s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
164s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
164s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
165s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-beachmat amd64 2.22.0+ds-3 [958 kB]
165s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB]
165s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB]
165s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB]
165s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB]
165s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB]
165s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB]
165s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB]
165s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
165s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B]
165s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
165s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB]
165s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-graph amd64 1.84.1-2 [1298 kB]
165s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rbgl amd64 1.82.0+dfsg-2 [588 kB]
165s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml amd64 3.99-0.20-1 [1751 kB]
165s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
165s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB]
165s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-runit all 0.4.33.1-1 [250 kB]
165s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
165s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocviews all 1.74.0-2 [670 kB]
165s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
165s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
165s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
165s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB]
165s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB]
165s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB]
165s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
165s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
165s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
165s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
166s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
166s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB]
166s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsematrixstats amd64 1.18.0+dfsg-2 [877 kB]
166s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB]
166s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB]
166s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB]
166s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-locfit amd64 1.5-9.12-1 [552 kB]
167s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
167s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
167s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
167s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
167s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
167s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
167s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB]
167s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
167s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
167s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
167s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
167s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
167s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
167s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
167s Get:259 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB]
167s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB]
167s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB]
167s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB]
168s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB]
168s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB]
168s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5lib amd64 1.28.0+dfsg-3 [97.2 kB]
168s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5filters amd64 1.18.1+dfsg-1 [137 kB]
168s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5 amd64 2.50.2+dfsg-1build1 [822 kB]
168s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-hdf5array amd64 1.34.0-2build1 [8792 kB]
168s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB]
168s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-glmgampoi amd64 1.18.0+dfsg-2 [1240 kB]
169s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.7 MB]
169s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB]
169s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB]
169s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vgam amd64 1.1-13-1 [7789 kB]
169s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB]
169s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
170s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ddrtree amd64 0.1.5-2build1 [185 kB]
170s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
170s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
170s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-igraph amd64 2.1.4-1build1 [5218 kB]
170s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
170s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cluster amd64 2.1.8.2-1 [570 kB]
170s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-combinat all 0.0-8-7build2 [42.5 kB]
170s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB]
170s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB]
170s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
170s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
170s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
170s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB]
170s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-leidenbase amd64 0.1.32-1 [2512 kB]
170s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
170s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
170s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
170s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
170s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
170s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
170s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
170s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pheatmap all 1.0.13-1 [79.6 kB]
170s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
170s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-slam amd64 0.1-55-1 [188 kB]
170s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB]
170s Get:302 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB]
170s Get:303 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB]
170s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-monocle amd64 2.34.0-2 [1522 kB]
171s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB]
171s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB]
171s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB]
171s Get:308 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
171s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB]
171s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rtracklayer amd64 1.66.0-3 [5225 kB]
171s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
171s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
171s Get:313 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB]
171s Get:314 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
171s Get:315 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-beeswarm amd64 0.4.0-1build1 [82.8 kB]
171s Get:316 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB]
171s Get:317 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit64 amd64 4.6.0-1-4 [491 kB]
171s Get:318 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB]
171s Get:319 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
171s Get:320 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
171s Get:321 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
171s Get:322 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
171s Get:323 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
171s Get:324 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
171s Get:325 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
171s Get:326 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
172s Get:327 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
172s Get:328 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB]
172s Get:329 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
172s Get:330 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
172s Get:331 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
172s Get:332 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB]
172s Get:333 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-e1071 amd64 1.7-17-1 [579 kB]
172s Get:334 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
172s Get:335 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
172s Get:336 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
172s Get:337 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build2 [155 kB]
172s Get:338 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB]
172s Get:339 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tzdb amd64 0.5.0-1 [538 kB]
172s Get:340 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clock amd64 0.7.2-1 [1903 kB]
172s Get:341 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB]
172s Get:342 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsevctrs amd64 0.2.0-2 [170 kB]
172s Get:343 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hardhat all 1.4.2+dfsg-1 [596 kB]
172s Get:344 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB]
172s Get:345 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB]
172s Get:346 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB]
172s Get:347 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB]
172s Get:348 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB]
172s Get:349 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-globals all 0.19.0-1 [160 kB]
172s Get:350 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB]
172s Get:351 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB]
172s Get:352 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB]
172s Get:353 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
172s Get:354 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-numderiv all 2016.8-1.1-3build1 [116 kB]
172s Get:355 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB]
172s Get:356 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-squarem all 2021.1-1build1 [180 kB]
173s Get:357 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lava all 1.8.2+dfsg-1 [2210 kB]
173s Get:358 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB]
173s Get:359 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB]
173s Get:360 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timechange amd64 0.3.0-2 [201 kB]
173s Get:361 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB]
173s Get:362 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
173s Get:363 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
173s Get:364 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timedate amd64 4052.112-1 [1298 kB]
173s Get:365 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
173s Get:366 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB]
173s Get:367 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-catools amd64 1.18.3-1 [209 kB]
173s Get:368 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-classint amd64 0.4-11+dfsg-1 [108 kB]
173s Get:369 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
173s Get:370 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
173s Get:371 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
173s Get:372 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
173s Get:373 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
173s Get:374 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
173s Get:375 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
173s Get:376 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
173s Get:377 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
173s Get:378 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
173s Get:379 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
173s Get:380 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
173s Get:381 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
173s Get:382 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
173s Get:383 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
173s Get:384 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
173s Get:385 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
173s Get:386 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
173s Get:387 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-miniui all 0.1.2-1 [37.3 kB]
173s Get:388 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shinyjs all 2.1.0-1build1 [967 kB]
174s Get:389 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB]
174s Get:390 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB]
174s Get:391 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
174s Get:392 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
174s Get:393 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crosstalk all 1.2.2+dfsg-1 [181 kB]
174s Get:394 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB]
174s Get:395 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB]
174s Get:396 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deoptimr all 1.1-4-1 [76.7 kB]
174s Get:397 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB]
174s Get:398 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB]
174s Get:399 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dotcall64 amd64 1.2-1 [36.8 kB]
174s Get:400 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sitmo amd64 2.0.2-1build1 [133 kB]
174s Get:401 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB]
174s Get:402 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastdummies all 1.7.5-1 [51.1 kB]
174s Get:403 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fitdistrplus all 1.2-6-1 [2764 kB]
174s Get:404 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB]
174s Get:405 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtools amd64 3.9.5-1build1 [345 kB]
174s Get:406 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gdata all 3.0.1-1build1 [491 kB]
174s Get:407 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB]
174s Get:408 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggbeeswarm all 0.7.3-1 [1743 kB]
174s Get:409 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB]
174s Get:410 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB]
174s Get:411 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB]
174s Get:412 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB]
174s Get:413 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB]
174s Get:414 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB]
174s Get:415 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggridges all 0.5.7-1 [2214 kB]
175s Get:416 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-goftest amd64 1.2-3-1build1 [60.5 kB]
175s Get:417 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gplots all 3.3.0-1 [3825 kB]
175s Get:418 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hdf5r amd64 1.3.12+dfsg-2 [1987 kB]
175s Get:419 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB]
175s Get:420 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-here all 1.0.2-1 [51.5 kB]
175s Get:421 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB]
175s Get:422 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB]
175s Get:423 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-zoo amd64 1.8-15-1 [1025 kB]
175s Get:424 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lmtest amd64 0.9.40-1build1 [400 kB]
175s Get:425 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mathjaxr all 2.0-0-1 [2396 kB]
175s Get:426 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixmodels all 0.5-4-1 [351 kB]
175s Get:427 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
175s Get:428 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB]
175s Get:429 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mnormt amd64 2.1.2-1 [176 kB]
175s Get:430 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB]
175s Get:431 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quantreg amd64 6.1-1 [1455 kB]
175s Get:432 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sn all 2.1.2-1 [1823 kB]
175s Get:433 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mvtnorm amd64 1.3-3-1build1 [921 kB]
175s Get:434 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tfisher all 0.2.0-3build1 [80.8 kB]
175s Get:435 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plotrix all 3.8-13-1 [1137 kB]
175s Get:436 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-th.data all 1.1-5-1 [8740 kB]
176s Get:437 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sandwich all 3.1-1-1build1 [1483 kB]
176s Get:438 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-multcomp all 1.4-29-1 [617 kB]
176s Get:439 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mutoss all 0.1-14-1 [1262 kB]
176s Get:440 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-robustbase amd64 0.99-7-1 [3074 kB]
176s Get:441 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB]
176s Get:442 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-metap all 1.13-1 [600 kB]
176s Get:443 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plotly all 4.10.4+dfsg-4 [3635 kB]
176s Get:444 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-segmented all 2.1-4-1 [1376 kB]
176s Get:445 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mixtools amd64 2.0.0.1-1 [1414 kB]
176s Get:446 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB]
176s Get:447 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB]
176s Get:448 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB]
176s Get:449 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB]
176s Get:450 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB]
176s Get:451 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB]
176s Get:452 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
177s Get:453 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.oo all 1.27.1-1 [978 kB]
177s Get:454 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.utils all 2.13.0-1 [1423 kB]
177s Get:455 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB]
177s Get:456 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpphnsw amd64 0.6.0+ds-1 [185 kB]
177s Get:457 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppprogress all 0.4.2-2build2 [23.0 kB]
177s Get:458 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpptoml amd64 0.2.3+dfsg-1 [118 kB]
177s Get:459 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reticulate amd64 1.41.0.1+dfsg-1 [1306 kB]
177s Get:460 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rocr all 1.0-12-1 [465 kB]
177s Get:461 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB]
177s Get:462 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rsvd all 1.0.5-1build1 [3595 kB]
177s Get:463 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB]
177s Get:464 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s2 amd64 1.1.9-1build1 [1815 kB]
177s Get:465 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB]
177s Get:466 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB]
177s Get:467 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB]
177s Get:468 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spam amd64 2.11-1-1 [2756 kB]
177s Get:469 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB]
177s Get:470 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.utils amd64 3.1-3-1 [387 kB]
177s Get:471 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.data all 3.1-6-1 [4153 kB]
177s Get:472 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.univar amd64 3.1-2-1 [315 kB]
177s Get:473 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.geom amd64 3.3-6-1 [3968 kB]
178s Get:474 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.random amd64 3.3-3-1 [1177 kB]
178s Get:475 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tensor all 1.5-4build1 [16.3 kB]
178s Get:476 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB]
178s Get:477 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.explore amd64 3.3-4-1 [3347 kB]
178s Get:478 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-uwot amd64 0.2.3-1 [1080 kB]
178s Get:479 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-seurat amd64 5.2.1-5 [3293 kB]
178s Get:480 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-units amd64 0.8-7+dfsg-2 [300 kB]
178s Get:481 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sf amd64 1.0-19+dfsg-2build2 [3298 kB]
178s Get:482 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB]
178s Get:483 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB]
179s Preconfiguring packages ...
179s Fetched 496 MB in 21s (23.1 MB/s)
179s Selecting previously unselected package fonts-dejavu-mono.
179s (Reading database ... 
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179s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ...
179s Unpacking fonts-dejavu-mono (2.37-8build1) ...
179s Selecting previously unselected package fonts-dejavu-core.
179s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ...
179s Unpacking fonts-dejavu-core (2.37-8build1) ...
179s Selecting previously unselected package fontconfig-config.
179s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
179s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
179s Selecting previously unselected package libfontconfig1:amd64.
179s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
179s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
179s Selecting previously unselected package fontconfig.
179s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
179s Unpacking fontconfig (2.17.1-3ubuntu1) ...
179s Selecting previously unselected package fonts-font-awesome.
179s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ...
179s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
179s Selecting previously unselected package fonts-glyphicons-halflings.
179s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
179s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
179s Selecting previously unselected package fonts-mathjax.
179s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
179s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
179s Selecting previously unselected package gdal-data.
179s Preparing to unpack .../008-gdal-data_3.12.1+dfsg-1_all.deb ...
179s Unpacking gdal-data (3.12.1+dfsg-1) ...
179s Selecting previously unselected package gdal-plugins:amd64.
179s Preparing to unpack .../009-gdal-plugins_3.12.1+dfsg-1_amd64.deb ...
179s Unpacking gdal-plugins:amd64 (3.12.1+dfsg-1) ...
179s Selecting previously unselected package hdf5-helpers.
179s Preparing to unpack .../010-hdf5-helpers_1.14.6+repack-2_amd64.deb ...
179s Unpacking hdf5-helpers (1.14.6+repack-2) ...
179s Selecting previously unselected package javascript-common.
179s Preparing to unpack .../011-javascript-common_12+nmu1build1_all.deb ...
179s Unpacking javascript-common (12+nmu1build1) ...
179s Selecting previously unselected package libc-dev-bin.
179s Preparing to unpack .../012-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
179s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
179s Selecting previously unselected package linux-libc-dev:amd64.
179s Preparing to unpack .../013-linux-libc-dev_6.19.0-3.3_amd64.deb ...
179s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
179s Selecting previously unselected package libcrypt-dev:amd64.
179s Preparing to unpack .../014-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
179s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
179s Selecting previously unselected package rpcsvc-proto.
179s Preparing to unpack .../015-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
179s Unpacking rpcsvc-proto (1.4.3-1build1) ...
179s Selecting previously unselected package libc6-dev:amd64.
179s Preparing to unpack .../016-libc6-dev_2.42-2ubuntu4_amd64.deb ...
179s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
180s Selecting previously unselected package comerr-dev:amd64.
180s Preparing to unpack .../017-comerr-dev_2.1-1.47.2-3ubuntu2_amd64.deb ...
180s Unpacking comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ...
180s Selecting previously unselected package libgssrpc4t64:amd64.
180s Preparing to unpack .../018-libgssrpc4t64_1.22.1-2_amd64.deb ...
180s Unpacking libgssrpc4t64:amd64 (1.22.1-2) ...
180s Selecting previously unselected package libkadm5clnt-mit12:amd64.
180s Preparing to unpack .../019-libkadm5clnt-mit12_1.22.1-2_amd64.deb ...
180s Unpacking libkadm5clnt-mit12:amd64 (1.22.1-2) ...
180s Selecting previously unselected package libkdb5-10t64:amd64.
180s Preparing to unpack .../020-libkdb5-10t64_1.22.1-2_amd64.deb ...
180s Unpacking libkdb5-10t64:amd64 (1.22.1-2) ...
180s Selecting previously unselected package libkadm5srv-mit12:amd64.
180s Preparing to unpack .../021-libkadm5srv-mit12_1.22.1-2_amd64.deb ...
180s Unpacking libkadm5srv-mit12:amd64 (1.22.1-2) ...
180s Selecting previously unselected package krb5-multidev:amd64.
180s Preparing to unpack .../022-krb5-multidev_1.22.1-2_amd64.deb ...
180s Unpacking krb5-multidev:amd64 (1.22.1-2) ...
180s Selecting previously unselected package libabsl20260107:amd64.
180s Preparing to unpack .../023-libabsl20260107_20260107.0-1_amd64.deb ...
180s Unpacking libabsl20260107:amd64 (20260107.0-1) ...
180s Selecting previously unselected package libaec0:amd64.
180s Preparing to unpack .../024-libaec0_1.1.5-1_amd64.deb ...
180s Unpacking libaec0:amd64 (1.1.5-1) ...
180s Selecting previously unselected package libgomp1:amd64.
180s Preparing to unpack .../025-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
180s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
180s Selecting previously unselected package libsuitesparseconfig7:amd64.
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180s Unpacking libamd3:amd64 (1:7.12.1+dfsg-1) ...
180s Selecting previously unselected package libaom3:amd64.
180s Preparing to unpack .../028-libaom3_3.13.1-2_amd64.deb ...
180s Unpacking libaom3:amd64 (3.13.1-2) ...
180s Selecting previously unselected package libblas3:amd64.
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180s Selecting previously unselected package libgfortran5:amd64.
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180s Selecting previously unselected package liblapack3:amd64.
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180s Selecting previously unselected package libarpack2t64:amd64.
180s Preparing to unpack .../032-libarpack2t64_3.9.1-6_amd64.deb ...
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180s Selecting previously unselected package libsuperlu7:amd64.
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180s Selecting previously unselected package libarmadillo15.
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180s Selecting previously unselected package libasan8:amd64.
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180s Selecting previously unselected package libdav1d7:amd64.
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180s Selecting previously unselected package libgav1-2:amd64.
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180s Selecting previously unselected package libjpeg-turbo8:amd64.
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180s Preparing to unpack .../039-libjpeg8_8c-2ubuntu12_amd64.deb ...
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180s Selecting previously unselected package libyuv0:amd64.
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180s Selecting previously unselected package libavif16:amd64.
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180s Selecting previously unselected package libsnappy1v5:amd64.
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180s Selecting previously unselected package libblosc1:amd64.
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180s Selecting previously unselected package libitm1:amd64.
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180s Selecting previously unselected package liblsan0:amd64.
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180s Preparing to unpack .../047-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
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180s Selecting previously unselected package libquadmath0:amd64.
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180s Selecting previously unselected package libgcc-15-dev:amd64.
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180s Selecting previously unselected package libstdc++-15-dev:amd64.
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180s Selecting previously unselected package libboost1.90-dev:amd64.
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181s Selecting previously unselected package libboost-dev:amd64.
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181s Unpacking libboost-dev:amd64 (1.90.0.0ubuntu3) ...
181s Selecting previously unselected package libbrotli-dev:amd64.
181s Preparing to unpack .../054-libbrotli-dev_1.2.0-3_amd64.deb ...
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181s Selecting previously unselected package libpixman-1-0:amd64.
181s Preparing to unpack .../055-libpixman-1-0_0.46.4-1_amd64.deb ...
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181s Selecting previously unselected package libxcb-render0:amd64.
181s Preparing to unpack .../056-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
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181s Selecting previously unselected package libxcb-shm0:amd64.
181s Preparing to unpack .../057-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
181s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
181s Selecting previously unselected package libxrender1:amd64.
181s Preparing to unpack .../058-libxrender1_1%3a0.9.12-1_amd64.deb ...
181s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
181s Selecting previously unselected package libcairo2:amd64.
181s Preparing to unpack .../059-libcairo2_1.18.4-3_amd64.deb ...
181s Unpacking libcairo2:amd64 (1.18.4-3) ...
181s Selecting previously unselected package libcfitsio10t64:amd64.
181s Preparing to unpack .../060-libcfitsio10t64_4.6.3-1_amd64.deb ...
181s Unpacking libcfitsio10t64:amd64 (4.6.3-1) ...
181s Selecting previously unselected package libcolamd3:amd64.
181s Preparing to unpack .../061-libcolamd3_1%3a7.12.1+dfsg-1_amd64.deb ...
181s Unpacking libcolamd3:amd64 (1:7.12.1+dfsg-1) ...
181s Selecting previously unselected package libidn2-dev:amd64.
181s Preparing to unpack .../062-libidn2-dev_2.3.8-4build1_amd64.deb ...
181s Unpacking libidn2-dev:amd64 (2.3.8-4build1) ...
181s Selecting previously unselected package libkrb5-dev:amd64.
181s Preparing to unpack .../063-libkrb5-dev_1.22.1-2_amd64.deb ...
181s Unpacking libkrb5-dev:amd64 (1.22.1-2) ...
181s Selecting previously unselected package libldap-dev:amd64.
181s Preparing to unpack .../064-libldap-dev_2.6.10+dfsg-1ubuntu5_amd64.deb ...
181s Unpacking libldap-dev:amd64 (2.6.10+dfsg-1ubuntu5) ...
181s Selecting previously unselected package libpkgconf3:amd64.
181s Preparing to unpack .../065-libpkgconf3_1.8.1-4build1_amd64.deb ...
181s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ...
181s Selecting previously unselected package pkgconf-bin.
181s Preparing to unpack .../066-pkgconf-bin_1.8.1-4build1_amd64.deb ...
181s Unpacking pkgconf-bin (1.8.1-4build1) ...
181s Selecting previously unselected package pkgconf:amd64.
181s Preparing to unpack .../067-pkgconf_1.8.1-4build1_amd64.deb ...
181s Unpacking pkgconf:amd64 (1.8.1-4build1) ...
181s Selecting previously unselected package libnghttp2-dev:amd64.
181s Preparing to unpack .../068-libnghttp2-dev_1.64.0-1.1ubuntu1_amd64.deb ...
181s Unpacking libnghttp2-dev:amd64 (1.64.0-1.1ubuntu1) ...
181s Selecting previously unselected package libpsl-dev:amd64.
181s Preparing to unpack .../069-libpsl-dev_0.21.2-1.1build2_amd64.deb ...
181s Unpacking libpsl-dev:amd64 (0.21.2-1.1build2) ...
181s Selecting previously unselected package libgmpxx4ldbl:amd64.
181s Preparing to unpack .../070-libgmpxx4ldbl_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ...
181s Unpacking libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5ubuntu1) ...
181s Selecting previously unselected package libgmp-dev:amd64.
181s Preparing to unpack .../071-libgmp-dev_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ...
181s Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-5ubuntu1) ...
181s Selecting previously unselected package libevent-2.1-7t64:amd64.
181s Preparing to unpack .../072-libevent-2.1-7t64_2.1.12-stable-10build2_amd64.deb ...
181s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
181s Selecting previously unselected package libunbound8:amd64.
181s Preparing to unpack .../073-libunbound8_1.24.2-1ubuntu1_amd64.deb ...
181s Unpacking libunbound8:amd64 (1.24.2-1ubuntu1) ...
181s Selecting previously unselected package libgnutls-dane0t64:amd64.
181s Preparing to unpack .../074-libgnutls-dane0t64_3.8.10-3ubuntu1_amd64.deb ...
181s Unpacking libgnutls-dane0t64:amd64 (3.8.10-3ubuntu1) ...
181s Selecting previously unselected package libgnutls-openssl27t64:amd64.
181s Preparing to unpack .../075-libgnutls-openssl27t64_3.8.10-3ubuntu1_amd64.deb ...
181s Unpacking libgnutls-openssl27t64:amd64 (3.8.10-3ubuntu1) ...
181s Selecting previously unselected package libp11-kit-dev:amd64.
181s Preparing to unpack .../076-libp11-kit-dev_0.25.10-1_amd64.deb ...
181s Unpacking libp11-kit-dev:amd64 (0.25.10-1) ...
181s Selecting previously unselected package libtasn1-6-dev:amd64.
181s Preparing to unpack .../077-libtasn1-6-dev_4.21.0-2_amd64.deb ...
181s Unpacking libtasn1-6-dev:amd64 (4.21.0-2) ...
181s Selecting previously unselected package nettle-dev:amd64.
181s Preparing to unpack .../078-nettle-dev_3.10.2-1_amd64.deb ...
181s Unpacking nettle-dev:amd64 (3.10.2-1) ...
181s Selecting previously unselected package libgnutls28-dev:amd64.
181s Preparing to unpack .../079-libgnutls28-dev_3.8.10-3ubuntu1_amd64.deb ...
181s Unpacking libgnutls28-dev:amd64 (3.8.10-3ubuntu1) ...
181s Selecting previously unselected package zlib1g-dev:amd64.
181s Preparing to unpack .../080-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ...
181s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
181s Selecting previously unselected package librtmp-dev:amd64.
181s Preparing to unpack .../081-librtmp-dev_2.4+20151223.gitfa8646d.1-3_amd64.deb ...
181s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-3) ...
181s Selecting previously unselected package libssl-dev:amd64.
181s Preparing to unpack .../082-libssl-dev_3.5.3-1ubuntu2_amd64.deb ...
181s Unpacking libssl-dev:amd64 (3.5.3-1ubuntu2) ...
182s Selecting previously unselected package libssh2-1-dev:amd64.
182s Preparing to unpack .../083-libssh2-1-dev_1.11.1-1build1_amd64.deb ...
182s Unpacking libssh2-1-dev:amd64 (1.11.1-1build1) ...
182s Selecting previously unselected package libzstd-dev:amd64.
182s Preparing to unpack .../084-libzstd-dev_1.5.7+dfsg-3_amd64.deb ...
182s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-3) ...
182s Selecting previously unselected package libcurl4-openssl-dev:amd64.
182s Preparing to unpack .../085-libcurl4-openssl-dev_8.18.0-1ubuntu1_amd64.deb ...
182s Unpacking libcurl4-openssl-dev:amd64 (8.18.0-1ubuntu1) ...
182s Selecting previously unselected package libdatrie1:amd64.
182s Preparing to unpack .../086-libdatrie1_0.2.14-1_amd64.deb ...
182s Unpacking libdatrie1:amd64 (0.2.14-1) ...
182s Selecting previously unselected package libde265-0:amd64.
182s Preparing to unpack .../087-libde265-0_1.0.16-1build1_amd64.deb ...
182s Unpacking libde265-0:amd64 (1.0.16-1build1) ...
182s Selecting previously unselected package libdeflate0:amd64.
182s Preparing to unpack .../088-libdeflate0_1.23-2build1_amd64.deb ...
182s Unpacking libdeflate0:amd64 (1.23-2build1) ...
182s Selecting previously unselected package libfftw3-double3:amd64.
182s Preparing to unpack .../089-libfftw3-double3_3.3.10-2fakesync1build2_amd64.deb ...
182s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build2) ...
182s Selecting previously unselected package libfyba0t64:amd64.
182s Preparing to unpack .../090-libfyba0t64_4.1.1-11build2_amd64.deb ...
182s Unpacking libfyba0t64:amd64 (4.1.1-11build2) ...
182s Selecting previously unselected package libminizip1t64:amd64.
182s Preparing to unpack .../091-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ...
182s Unpacking libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
182s Selecting previously unselected package libfreexl1:amd64.
182s Preparing to unpack .../092-libfreexl1_2.0.0-1build3_amd64.deb ...
182s Unpacking libfreexl1:amd64 (2.0.0-1build3) ...
182s Selecting previously unselected package libgeos3.14.1:amd64.
182s Preparing to unpack .../093-libgeos3.14.1_3.14.1-2_amd64.deb ...
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182s Selecting previously unselected package libgeos-c1t64:amd64.
182s Preparing to unpack .../094-libgeos-c1t64_3.14.1-2_amd64.deb ...
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182s Selecting previously unselected package proj-data.
182s Preparing to unpack .../095-proj-data_9.7.1-1_all.deb ...
182s Unpacking proj-data (9.7.1-1) ...
182s Selecting previously unselected package libjbig0:amd64.
182s Preparing to unpack .../096-libjbig0_2.1-6.1ubuntu3_amd64.deb ...
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182s Selecting previously unselected package liblerc4:amd64.
182s Preparing to unpack .../097-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ...
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182s Selecting previously unselected package libsharpyuv0:amd64.
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182s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ...
182s Selecting previously unselected package libwebp7:amd64.
182s Preparing to unpack .../099-libwebp7_1.5.0-0.1build1_amd64.deb ...
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182s Selecting previously unselected package libtiff6:amd64.
182s Preparing to unpack .../100-libtiff6_4.7.0-3ubuntu3_amd64.deb ...
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182s Selecting previously unselected package libproj25:amd64.
182s Preparing to unpack .../101-libproj25_9.7.1-1_amd64.deb ...
182s Unpacking libproj25:amd64 (9.7.1-1) ...
182s Selecting previously unselected package libgeotiff5:amd64.
182s Preparing to unpack .../102-libgeotiff5_1.7.4-1build1_amd64.deb ...
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182s Selecting previously unselected package libgif7:amd64.
182s Preparing to unpack .../103-libgif7_5.2.2-1ubuntu3_amd64.deb ...
182s Unpacking libgif7:amd64 (5.2.2-1ubuntu3) ...
182s Selecting previously unselected package libsz2:amd64.
182s Preparing to unpack .../104-libsz2_1.1.5-1_amd64.deb ...
182s Unpacking libsz2:amd64 (1.1.5-1) ...
182s Selecting previously unselected package libhdf4-0:amd64.
182s Preparing to unpack .../105-libhdf4-0_4.3.1-2_amd64.deb ...
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182s Selecting previously unselected package libhdf5-310:amd64.
182s Preparing to unpack .../106-libhdf5-310_1.14.6+repack-2_amd64.deb ...
182s Unpacking libhdf5-310:amd64 (1.14.6+repack-2) ...
182s Selecting previously unselected package libheif-plugin-aomdec:amd64.
182s Preparing to unpack .../107-libheif-plugin-aomdec_1.21.2-1_amd64.deb ...
182s Unpacking libheif-plugin-aomdec:amd64 (1.21.2-1) ...
182s Selecting previously unselected package libheif-plugin-libde265:amd64.
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182s Unpacking libheif-plugin-libde265:amd64 (1.21.2-1) ...
182s Selecting previously unselected package libheif1:amd64.
182s Preparing to unpack .../109-libheif1_1.21.2-1_amd64.deb ...
182s Unpacking libheif1:amd64 (1.21.2-1) ...
182s Selecting previously unselected package libhwy1t64:amd64.
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182s Unpacking libhwy1t64:amd64 (1.3.0-2) ...
182s Selecting previously unselected package liblcms2-2:amd64.
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182s Unpacking liblcms2-2:amd64 (2.17-1) ...
182s Selecting previously unselected package libjxl0.11:amd64.
182s Preparing to unpack .../112-libjxl0.11_0.11.1-6ubuntu1_amd64.deb ...
182s Unpacking libjxl0.11:amd64 (0.11.1-6ubuntu1) ...
182s Selecting previously unselected package liburiparser1:amd64.
182s Preparing to unpack .../113-liburiparser1_0.9.8+dfsg-2_amd64.deb ...
182s Unpacking liburiparser1:amd64 (0.9.8+dfsg-2) ...
182s Selecting previously unselected package libkmlbase1t64:amd64.
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182s Selecting previously unselected package libkmldom1t64:amd64.
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182s Selecting previously unselected package libkmlengine1t64:amd64.
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182s Unpacking libkmlengine1t64:amd64 (1.3.0-13) ...
182s Selecting previously unselected package libmuparser2v5:amd64.
182s Preparing to unpack .../117-libmuparser2v5_2.3.4-2_amd64.deb ...
182s Unpacking libmuparser2v5:amd64 (2.3.4-2) ...
182s Selecting previously unselected package mysql-common.
182s Preparing to unpack .../118-mysql-common_5.8+1.1.1ubuntu2_all.deb ...
182s Unpacking mysql-common (5.8+1.1.1ubuntu2) ...
182s Selecting previously unselected package libmysqlclient24:amd64.
182s Preparing to unpack .../119-libmysqlclient24_8.4.8-0ubuntu1_amd64.deb ...
182s Unpacking libmysqlclient24:amd64 (8.4.8-0ubuntu1) ...
182s Selecting previously unselected package libhdf5-hl-310:amd64.
182s Preparing to unpack .../120-libhdf5-hl-310_1.14.6+repack-2_amd64.deb ...
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182s Selecting previously unselected package libnetcdf22:amd64.
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182s Unpacking libnetcdf22:amd64 (1:4.9.3-1build1) ...
182s Selecting previously unselected package libltdl7:amd64.
182s Preparing to unpack .../122-libltdl7_2.5.4-9_amd64.deb ...
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182s Selecting previously unselected package libodbc2:amd64.
182s Preparing to unpack .../123-libodbc2_2.3.14-1_amd64.deb ...
182s Unpacking libodbc2:amd64 (2.3.14-1) ...
182s Selecting previously unselected package unixodbc-common.
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182s Selecting previously unselected package libodbcinst2:amd64.
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182s Unpacking libodbcinst2:amd64 (2.3.14-1) ...
182s Selecting previously unselected package libopenjp2-7:amd64.
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185s Selecting previously unselected package r-bioc-biocparallel.
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185s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
185s Selecting previously unselected package r-cran-mime.
185s Preparing to unpack .../229-r-cran-mime_0.12-2_amd64.deb ...
185s Unpacking r-cran-mime (0.12-2) ...
185s Selecting previously unselected package r-cran-sys.
185s Preparing to unpack .../230-r-cran-sys_3.4.3-1_amd64.deb ...
185s Unpacking r-cran-sys (3.4.3-1) ...
185s Selecting previously unselected package r-cran-askpass.
185s Preparing to unpack .../231-r-cran-askpass_1.2.1-1_amd64.deb ...
185s Unpacking r-cran-askpass (1.2.1-1) ...
185s Selecting previously unselected package r-cran-openssl.
185s Preparing to unpack .../232-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ...
185s Unpacking r-cran-openssl (2.3.2+dfsg-1) ...
185s Selecting previously unselected package r-cran-r6.
185s Preparing to unpack .../233-r-cran-r6_2.6.1-1_all.deb ...
185s Unpacking r-cran-r6 (2.6.1-1) ...
185s Selecting previously unselected package r-cran-httr.
185s Preparing to unpack .../234-r-cran-httr_1.4.7+dfsg-1_all.deb ...
185s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
185s Selecting previously unselected package r-bioc-ucsc.utils.
185s Preparing to unpack .../235-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ...
185s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ...
185s Selecting previously unselected package r-bioc-genomeinfodbdata.
185s Preparing to unpack .../236-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ...
185s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ...
186s Selecting previously unselected package r-bioc-genomeinfodb.
186s Preparing to unpack .../237-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ...
186s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
186s Selecting previously unselected package r-bioc-biostrings.
186s Preparing to unpack .../238-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ...
186s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ...
186s Selecting previously unselected package r-bioc-sparsematrixstats.
186s Preparing to unpack .../239-r-bioc-sparsematrixstats_1.18.0+dfsg-2_amd64.deb ...
186s Unpacking r-bioc-sparsematrixstats (1.18.0+dfsg-2) ...
186s Selecting previously unselected package r-bioc-delayedmatrixstats.
186s Preparing to unpack .../240-r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb ...
186s Unpacking r-bioc-delayedmatrixstats (1.28.1+ds-1) ...
186s Selecting previously unselected package r-bioc-genomicranges.
186s Preparing to unpack .../241-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ...
186s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ...
186s Selecting previously unselected package r-bioc-summarizedexperiment.
186s Preparing to unpack .../242-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ...
186s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
186s Selecting previously unselected package r-cran-locfit.
186s Preparing to unpack .../243-r-cran-locfit_1.5-9.12-1_amd64.deb ...
186s Unpacking r-cran-locfit (1.5-9.12-1) ...
186s Selecting previously unselected package r-cran-cli.
186s Preparing to unpack .../244-r-cran-cli_3.6.4-1_amd64.deb ...
186s Unpacking r-cran-cli (3.6.4-1) ...
186s Selecting previously unselected package r-cran-glue.
186s Preparing to unpack .../245-r-cran-glue_1.8.0-1_amd64.deb ...
186s Unpacking r-cran-glue (1.8.0-1) ...
186s Selecting previously unselected package r-cran-rlang.
186s Preparing to unpack .../246-r-cran-rlang_1.1.5-3_amd64.deb ...
186s Unpacking r-cran-rlang (1.1.5-3) ...
186s Selecting previously unselected package r-cran-lifecycle.
186s Preparing to unpack .../247-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
186s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
186s Selecting previously unselected package r-cran-gtable.
186s Preparing to unpack .../248-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
186s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
186s Selecting previously unselected package r-cran-isoband.
186s Preparing to unpack .../249-r-cran-isoband_0.2.7-1_amd64.deb ...
186s Unpacking r-cran-isoband (0.2.7-1) ...
186s Selecting previously unselected package r-cran-s7.
186s Preparing to unpack .../250-r-cran-s7_0.2.0-1_amd64.deb ...
186s Unpacking r-cran-s7 (0.2.0-1) ...
186s Selecting previously unselected package r-cran-farver.
186s Preparing to unpack .../251-r-cran-farver_2.1.2-1_amd64.deb ...
186s Unpacking r-cran-farver (2.1.2-1) ...
186s Selecting previously unselected package r-cran-labeling.
186s Preparing to unpack .../252-r-cran-labeling_0.4.3-1_all.deb ...
186s Unpacking r-cran-labeling (0.4.3-1) ...
186s Selecting previously unselected package r-cran-rcolorbrewer.
186s Preparing to unpack .../253-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ...
186s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ...
186s Selecting previously unselected package r-cran-viridislite.
186s Preparing to unpack .../254-r-cran-viridislite_0.4.3-1_all.deb ...
186s Unpacking r-cran-viridislite (0.4.3-1) ...
186s Selecting previously unselected package r-cran-scales.
186s Preparing to unpack .../255-r-cran-scales_1.4.0-1_all.deb ...
186s Unpacking r-cran-scales (1.4.0-1) ...
186s Selecting previously unselected package r-cran-vctrs.
186s Preparing to unpack .../256-r-cran-vctrs_0.6.5-1_amd64.deb ...
186s Unpacking r-cran-vctrs (0.6.5-1) ...
186s Selecting previously unselected package r-cran-withr.
186s Preparing to unpack .../257-r-cran-withr_3.0.2+dfsg-1_all.deb ...
186s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
186s Selecting previously unselected package r-cran-ggplot2.
186s Preparing to unpack .../258-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ...
186s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ...
186s Selecting previously unselected package r-cran-rcpparmadillo.
186s Preparing to unpack .../259-r-cran-rcpparmadillo_15.2.3-1-1_amd64.deb ...
186s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ...
186s Selecting previously unselected package r-bioc-deseq2.
186s Preparing to unpack .../260-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ...
186s Unpacking r-bioc-deseq2 (1.46.0+dfsg-2) ...
186s Selecting previously unselected package r-bioc-rhtslib.
186s Preparing to unpack .../261-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ...
186s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ...
186s Selecting previously unselected package r-bioc-rsamtools.
186s Preparing to unpack .../262-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ...
186s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ...
186s Selecting previously unselected package r-bioc-genomicalignments.
186s Preparing to unpack .../263-r-bioc-genomicalignments_1.42.0-2_amd64.deb ...
186s Unpacking r-bioc-genomicalignments (1.42.0-2) ...
186s Selecting previously unselected package r-bioc-rhdf5lib.
186s Preparing to unpack .../264-r-bioc-rhdf5lib_1.28.0+dfsg-3_amd64.deb ...
186s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-3) ...
186s Selecting previously unselected package r-bioc-rhdf5filters.
186s Preparing to unpack .../265-r-bioc-rhdf5filters_1.18.1+dfsg-1_amd64.deb ...
186s Unpacking r-bioc-rhdf5filters (1.18.1+dfsg-1) ...
186s Selecting previously unselected package r-bioc-rhdf5.
186s Preparing to unpack .../266-r-bioc-rhdf5_2.50.2+dfsg-1build1_amd64.deb ...
186s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ...
186s Selecting previously unselected package r-bioc-hdf5array.
186s Preparing to unpack .../267-r-bioc-hdf5array_1.34.0-2build1_amd64.deb ...
186s Unpacking r-bioc-hdf5array (1.34.0-2build1) ...
186s Selecting previously unselected package r-bioc-singlecellexperiment.
186s Preparing to unpack .../268-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ...
186s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ...
186s Selecting previously unselected package r-bioc-glmgampoi.
187s Preparing to unpack .../269-r-bioc-glmgampoi_1.18.0+dfsg-2_amd64.deb ...
187s Unpacking r-bioc-glmgampoi (1.18.0+dfsg-2) ...
187s Selecting previously unselected package r-bioc-hsmmsinglecell.
187s Preparing to unpack .../270-r-bioc-hsmmsinglecell_1.26.0-2_all.deb ...
187s Unpacking r-bioc-hsmmsinglecell (1.26.0-2) ...
187s Selecting previously unselected package r-cran-statmod.
187s Preparing to unpack .../271-r-cran-statmod_1.5.0-1_amd64.deb ...
187s Unpacking r-cran-statmod (1.5.0-1) ...
187s Selecting previously unselected package r-bioc-limma.
187s Preparing to unpack .../272-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ...
187s Unpacking r-bioc-limma (3.62.2+dfsg-1) ...
187s Selecting previously unselected package r-cran-vgam.
187s Preparing to unpack .../273-r-cran-vgam_1.1-13-1_amd64.deb ...
187s Unpacking r-cran-vgam (1.1-13-1) ...
187s Selecting previously unselected package r-cran-irlba.
187s Preparing to unpack .../274-r-cran-irlba_2.3.5.1-4_amd64.deb ...
187s Unpacking r-cran-irlba (2.3.5.1-4) ...
187s Selecting previously unselected package r-cran-rcppeigen.
187s Preparing to unpack .../275-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ...
187s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ...
187s Selecting previously unselected package r-cran-ddrtree.
187s Preparing to unpack .../276-r-cran-ddrtree_0.1.5-2build1_amd64.deb ...
187s Unpacking r-cran-ddrtree (0.1.5-2build1) ...
187s Selecting previously unselected package r-cran-magrittr.
187s Preparing to unpack .../277-r-cran-magrittr_2.0.3-1_amd64.deb ...
187s Unpacking r-cran-magrittr (2.0.3-1) ...
187s Selecting previously unselected package r-cran-pkgconfig.
187s Preparing to unpack .../278-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
187s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
187s Selecting previously unselected package r-cran-igraph.
187s Preparing to unpack .../279-r-cran-igraph_2.1.4-1build1_amd64.deb ...
187s Unpacking r-cran-igraph (2.1.4-1build1) ...
187s Selecting previously unselected package r-cran-plyr.
187s Preparing to unpack .../280-r-cran-plyr_1.8.9-1_amd64.deb ...
187s Unpacking r-cran-plyr (1.8.9-1) ...
187s Selecting previously unselected package r-cran-cluster.
187s Preparing to unpack .../281-r-cran-cluster_2.1.8.2-1_amd64.deb ...
187s Unpacking r-cran-cluster (2.1.8.2-1) ...
187s Selecting previously unselected package r-cran-combinat.
187s Preparing to unpack .../282-r-cran-combinat_0.0-8-7build2_all.deb ...
187s Unpacking r-cran-combinat (0.0-8-7build2) ...
187s Selecting previously unselected package r-cran-fastica.
187s Preparing to unpack .../283-r-cran-fastica_1.2-7-1_amd64.deb ...
187s Unpacking r-cran-fastica (1.2-7-1) ...
187s Selecting previously unselected package r-cran-rtsne.
187s Preparing to unpack .../284-r-cran-rtsne_0.17-1_amd64.deb ...
187s Unpacking r-cran-rtsne (0.17-1) ...
187s Selecting previously unselected package r-cran-mass.
187s Preparing to unpack .../285-r-cran-mass_7.3-65-1_amd64.deb ...
187s Unpacking r-cran-mass (7.3-65-1) ...
187s Selecting previously unselected package r-cran-stringi.
187s Preparing to unpack .../286-r-cran-stringi_1.8.4-1build2_amd64.deb ...
187s Unpacking r-cran-stringi (1.8.4-1build2) ...
187s Selecting previously unselected package r-cran-stringr.
187s Preparing to unpack .../287-r-cran-stringr_1.5.1-1_all.deb ...
187s Unpacking r-cran-stringr (1.5.1-1) ...
187s Selecting previously unselected package r-cran-reshape2.
187s Preparing to unpack .../288-r-cran-reshape2_1.4.4-2build2_amd64.deb ...
187s Unpacking r-cran-reshape2 (1.4.4-2build2) ...
187s Selecting previously unselected package r-cran-leidenbase.
187s Preparing to unpack .../289-r-cran-leidenbase_0.1.32-1_amd64.deb ...
187s Unpacking r-cran-leidenbase (0.1.32-1) ...
187s Selecting previously unselected package r-cran-fansi.
187s Preparing to unpack .../290-r-cran-fansi_1.0.6-2_amd64.deb ...
187s Unpacking r-cran-fansi (1.0.6-2) ...
187s Selecting previously unselected package r-cran-utf8.
187s Preparing to unpack .../291-r-cran-utf8_1.2.4-1_amd64.deb ...
187s Unpacking r-cran-utf8 (1.2.4-1) ...
187s Selecting previously unselected package r-cran-pillar.
187s Preparing to unpack .../292-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
187s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
187s Selecting previously unselected package r-cran-tibble.
187s Preparing to unpack .../293-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
187s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
187s Selecting previously unselected package r-cran-generics.
187s Preparing to unpack .../294-r-cran-generics_0.1.4-1_all.deb ...
187s Unpacking r-cran-generics (0.1.4-1) ...
187s Selecting previously unselected package r-cran-tidyselect.
187s Preparing to unpack .../295-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
187s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
187s Selecting previously unselected package r-cran-dplyr.
187s Preparing to unpack .../296-r-cran-dplyr_1.1.4-4_amd64.deb ...
187s Unpacking r-cran-dplyr (1.1.4-4) ...
187s Selecting previously unselected package r-cran-pheatmap.
187s Preparing to unpack .../297-r-cran-pheatmap_1.0.13-1_all.deb ...
187s Unpacking r-cran-pheatmap (1.0.13-1) ...
187s Selecting previously unselected package r-cran-proxy.
187s Preparing to unpack .../298-r-cran-proxy_0.4-27-1_amd64.deb ...
187s Unpacking r-cran-proxy (0.4-27-1) ...
187s Selecting previously unselected package r-cran-slam.
187s Preparing to unpack .../299-r-cran-slam_0.1-55-1_amd64.deb ...
187s Unpacking r-cran-slam (0.1-55-1) ...
187s Selecting previously unselected package r-cran-gridextra.
187s Preparing to unpack .../300-r-cran-gridextra_2.3-3build2_all.deb ...
187s Unpacking r-cran-gridextra (2.3-3build2) ...
187s Selecting previously unselected package r-cran-viridis.
187s Preparing to unpack .../301-r-cran-viridis_0.6.5-1_all.deb ...
187s Unpacking r-cran-viridis (0.6.5-1) ...
187s Selecting previously unselected package r-cran-rann.
187s Preparing to unpack .../302-r-cran-rann_2.6.2-1_amd64.deb ...
187s Unpacking r-cran-rann (2.6.2-1) ...
187s Selecting previously unselected package r-bioc-monocle.
187s Preparing to unpack .../303-r-bioc-monocle_2.34.0-2_amd64.deb ...
187s Unpacking r-bioc-monocle (2.34.0-2) ...
187s Selecting previously unselected package r-cran-survival.
187s Preparing to unpack .../304-r-cran-survival_3.8-6-1_amd64.deb ...
187s Unpacking r-cran-survival (3.8-6-1) ...
187s Selecting previously unselected package r-bioc-multtest.
187s Preparing to unpack .../305-r-bioc-multtest_2.62.0-2_amd64.deb ...
187s Unpacking r-bioc-multtest (2.62.0-2) ...
187s Selecting previously unselected package r-cran-rjson.
187s Preparing to unpack .../306-r-cran-rjson_0.2.23-1_amd64.deb ...
187s Unpacking r-cran-rjson (0.2.23-1) ...
188s Selecting previously unselected package r-cran-yaml.
188s Preparing to unpack .../307-r-cran-yaml_2.3.10-1_amd64.deb ...
188s Unpacking r-cran-yaml (2.3.10-1) ...
188s Selecting previously unselected package r-cran-restfulr.
188s Preparing to unpack .../308-r-cran-restfulr_0.0.15-1_amd64.deb ...
188s Unpacking r-cran-restfulr (0.0.15-1) ...
188s Selecting previously unselected package r-bioc-rtracklayer.
188s Preparing to unpack .../309-r-bioc-rtracklayer_1.66.0-3_amd64.deb ...
188s Unpacking r-bioc-rtracklayer (1.66.0-3) ...
188s Selecting previously unselected package r-cran-nlme.
188s Preparing to unpack .../310-r-cran-nlme_3.1.168-1_amd64.deb ...
188s Unpacking r-cran-nlme (3.1.168-1) ...
188s Selecting previously unselected package r-cran-digest.
188s Preparing to unpack .../311-r-cran-digest_0.6.39-1_amd64.deb ...
188s Unpacking r-cran-digest (0.6.39-1) ...
188s Selecting previously unselected package r-cran-ape.
188s Preparing to unpack .../312-r-cran-ape_5.8-1-1_amd64.deb ...
188s Unpacking r-cran-ape (5.8-1-1) ...
188s Selecting previously unselected package r-cran-base64enc.
188s Preparing to unpack .../313-r-cran-base64enc_0.1-3-3build1_amd64.deb ...
188s Unpacking r-cran-base64enc (0.1-3-3build1) ...
188s Selecting previously unselected package r-cran-beeswarm.
188s Preparing to unpack .../314-r-cran-beeswarm_0.4.0-1build1_amd64.deb ...
188s Unpacking r-cran-beeswarm (0.4.0-1build1) ...
188s Selecting previously unselected package r-cran-bit.
188s Preparing to unpack .../315-r-cran-bit_4.6.0+dfsg-1_amd64.deb ...
188s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
188s Selecting previously unselected package r-cran-bit64.
188s Preparing to unpack .../316-r-cran-bit64_4.6.0-1-4_amd64.deb ...
188s Unpacking r-cran-bit64 (4.6.0-1-4) ...
188s Selecting previously unselected package r-cran-brio.
188s Preparing to unpack .../317-r-cran-brio_1.1.5-1_amd64.deb ...
188s Unpacking r-cran-brio (1.1.5-1) ...
188s Selecting previously unselected package r-cran-fastmap.
188s Preparing to unpack .../318-r-cran-fastmap_1.2.0-1_amd64.deb ...
188s Unpacking r-cran-fastmap (1.2.0-1) ...
188s Selecting previously unselected package r-cran-cachem.
188s Preparing to unpack .../319-r-cran-cachem_1.1.0-1_amd64.deb ...
188s Unpacking r-cran-cachem (1.1.0-1) ...
188s Selecting previously unselected package r-cran-htmltools.
188s Preparing to unpack .../320-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
188s Unpacking r-cran-htmltools (0.5.8.1-1) ...
188s Selecting previously unselected package r-cran-jquerylib.
188s Preparing to unpack .../321-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ...
188s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ...
188s Selecting previously unselected package r-cran-memoise.
188s Preparing to unpack .../322-r-cran-memoise_2.0.1-1build1_all.deb ...
188s Unpacking r-cran-memoise (2.0.1-1build1) ...
188s Selecting previously unselected package r-cran-fs.
188s Preparing to unpack .../323-r-cran-fs_1.6.5+dfsg-1_amd64.deb ...
188s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
188s Selecting previously unselected package r-cran-rappdirs.
188s Preparing to unpack .../324-r-cran-rappdirs_0.3.3-1build1_amd64.deb ...
188s Unpacking r-cran-rappdirs (0.3.3-1build1) ...
188s Selecting previously unselected package r-cran-sass.
188s Preparing to unpack .../325-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
188s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
188s Selecting previously unselected package r-cran-bslib.
188s Preparing to unpack .../326-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
188s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
188s Selecting previously unselected package r-cran-cairo.
188s Preparing to unpack .../327-r-cran-cairo_1.6-2-1_amd64.deb ...
188s Unpacking r-cran-cairo (1.6-2-1) ...
188s Selecting previously unselected package r-cran-ps.
188s Preparing to unpack .../328-r-cran-ps_1.9.0-1_amd64.deb ...
188s Unpacking r-cran-ps (1.9.0-1) ...
188s Selecting previously unselected package r-cran-processx.
188s Preparing to unpack .../329-r-cran-processx_3.8.6-1_amd64.deb ...
188s Unpacking r-cran-processx (3.8.6-1) ...
188s Selecting previously unselected package r-cran-callr.
188s Preparing to unpack .../330-r-cran-callr_3.7.6-1_all.deb ...
188s Unpacking r-cran-callr (3.7.6-1) ...
188s Selecting previously unselected package r-cran-class.
188s Preparing to unpack .../331-r-cran-class_7.3-23-1_amd64.deb ...
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188s Selecting previously unselected package r-cran-e1071.
188s Preparing to unpack .../332-r-cran-e1071_1.7-17-1_amd64.deb ...
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188s Selecting previously unselected package r-cran-iterators.
188s Preparing to unpack .../333-r-cran-iterators_1.0.14-1build1_all.deb ...
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188s Selecting previously unselected package r-cran-foreach.
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188s Selecting previously unselected package r-cran-data.table.
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188s Selecting previously unselected package r-cran-modelmetrics.
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188s Selecting previously unselected package r-cran-proc.
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188s Selecting previously unselected package r-cran-tzdb.
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188s Selecting previously unselected package r-cran-hardhat.
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188s Selecting previously unselected package r-cran-rpart.
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188s Selecting previously unselected package r-cran-shape.
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188s Selecting previously unselected package r-cran-diagram.
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188s Selecting previously unselected package r-cran-kernsmooth.
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189s Selecting previously unselected package r-cran-classint.
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189s Selecting previously unselected package r-cran-evaluate.
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189s Selecting previously unselected package r-cran-xfun.
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189s Selecting previously unselected package r-cran-highr.
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189s Selecting previously unselected package libjs-mathjax.
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189s Selecting previously unselected package r-cran-knitr.
189s Preparing to unpack .../372-r-cran-knitr_1.51+dfsg-1_all.deb ...
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189s Selecting previously unselected package r-cran-fontawesome.
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189s Selecting previously unselected package r-cran-tinytex.
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189s Selecting previously unselected package libjs-modernizr.
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189s Selecting previously unselected package r-cran-later.
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189s Selecting previously unselected package r-cran-promises.
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189s Selecting previously unselected package r-cran-httpuv.
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189s Selecting previously unselected package r-cran-shiny.
189s Preparing to unpack .../383-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
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189s Selecting previously unselected package r-cran-rmarkdown.
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190s Selecting previously unselected package r-cran-htmlwidgets.
190s Preparing to unpack .../385-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ...
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190s Preparing to unpack .../387-r-cran-shinyjs_2.1.0-1build1_all.deb ...
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190s Selecting previously unselected package r-cran-colourpicker.
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190s Selecting previously unselected package r-cran-conquer.
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190s Selecting previously unselected package r-cran-lazyeval.
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190s Selecting previously unselected package r-cran-crosstalk.
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190s Selecting previously unselected package r-cran-rdpack.
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195s Setting up r-cran-seurat (5.2.1-5) ...
195s Setting up libheif1:amd64 (1.21.2-1) ...
195s Setting up libheif-plugin-aomdec:amd64 (1.21.2-1) ...
195s Setting up libheif-plugin-libde265:amd64 (1.21.2-1) ...
195s Setting up libgdal38:amd64 (3.12.1+dfsg-1) ...
195s Setting up r-cran-sf (1.0-19+dfsg-2build2) ...
195s Processing triggers for install-info (7.2-5) ...
195s Processing triggers for libc-bin (2.42-2ubuntu4) ...
195s Processing triggers for man-db (2.13.1-1build1) ...
196s autopkgtest [05:54:08]: test run-unit-test: [-----------------------
196s BEGIN TEST testthat.R
196s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
197s 
197s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
197s Copyright (C) 2025 The R Foundation for Statistical Computing
197s Platform: x86_64-pc-linux-gnu
197s 
197s R is free software and comes with ABSOLUTELY NO WARRANTY.
197s You are welcome to redistribute it under certain conditions.
197s Type 'license()' or 'licence()' for distribution details.
197s 
197s R is a collaborative project with many contributors.
197s Type 'contributors()' for more information and
197s 'citation()' on how to cite R or R packages in publications.
197s 
197s Type 'demo()' for some demos, 'help()' for on-line help, or
197s 'help.start()' for an HTML browser interface to help.
197s Type 'q()' to quit R.
197s 
197s > library(testthat)
197s > library(Seurat)
197s Loading required package: SeuratObject
197s Loading required package: sp
198s ‘SeuratObject’ was built under R 4.4.1 but the current version is
198s 4.5.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI
198s for R may have changed
198s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current
198s version is 1.7.4; it is recomended that you reinstall ‘SeuratObject’ as
198s the ABI for ‘Matrix’ may have changed
198s 
198s Attaching package: ‘SeuratObject’
198s 
198s The following objects are masked from ‘package:base’:
198s 
198s     intersect, t
198s 
199s > #
199s > # # Run tests for 'v3'
199s > # message('Run tests for v3 assay')
199s > # options(Seurat.object.assay.version = 'v3')
199s > # test_check("Seurat")
199s > 
199s > # Run tests for 'v5'
199s > message('Run tests for v5 assay')
199s > options(Seurat.object.assay.version = 'v5')
199s > test_check("Seurat")
199s Run tests for v5 assay
200s 
  |                                                                            
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  |======================================================================| 100%
212s Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
212s 
212s Number of nodes: 80
212s Number of edges: 525
212s 
212s Running Louvain algorithm...
212s 0%   10   20   30   40   50   60   70   80   90   100%
212s [----|----|----|----|----|----|----|----|----|----|
212s ***********************************Maximum modularity in 10 random starts: 0.8255
212s Number of communities: 6
212s Elapsed time: 0 seconds
212s Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
212s 
212s Number of nodes: 80
212s Number of edges: 525
212s 
212s Running Louvain algorithm...
212s Maximum modularity in 10 random starts: 0.8255
212s Number of communities: 6
212s Elapsed time: 0 seconds
212s ***************|
212s 0%   10   20   30   40   50   60   70   80   90   100%
212s [----|----|----|----|----|----|----|----|----|----|
212s **************************************************|
212s Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
212s 
212s Number of nodes: 80
212s Number of edges: 525
212s 
212s Running Louvain algorithm with multilevel refinement...
212s 0%   10   20   30   40   50   60   70   80   90   100%
212s [----|----|----|----|----|----|----|----|----|----|
212s ******************************Maximum modularity in 10 random starts: 0.8255
212s Number of communities: 6
212s Elapsed time: 0 seconds
212s ********************|
212s 0%   10   20   30   40   50   60   70   80   90   100%
212s [----|----|----|----|----|----|----|----|----|----|
212s Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
212s 
212s Number of nodes: 80
212s Number of edges: 525
212s 
212s Running smart local moving algorithm...
212s ***********************************Maximum modularity in 10 random starts: 0.8255
212s Number of communities: 6
212s Elapsed time: 0 seconds
212s ***************|
249s Performing log-normalization
249s 0%   10   20   30   40   50   60   70   80   90   100%
249s [----|----|----|----|----|----|----|----|----|----|
249s **************************************************|
249s Performing log-normalization
249s 0%   10   20   30   40   50   60   70   80   90   100%
249s [----|----|----|----|----|----|----|----|----|----|
249s **************************************************|
249s Performing log-normalization
249s 0%   10   20   30   40   50   60   70   80   90   100%
249s [----|----|----|----|----|----|----|----|----|----|
249s **************************************************|
257s 
  |                                                                            
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  |======================================================================| 100%
259s 
  |                                                                            
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  |                                                                            
  |======================================================================| 100%
259s 
  |                                                                            
  |                                                                      |   0%
  |                                                                            
  |======================================================================| 100%
288s Performing log-normalization
288s 0%   10   20   30   40   50   60   70   80   90   100%
288s [----|----|----|----|----|----|----|----|----|----|
288s **************************************************|
289s Calculating gene variances
289s 0%   10   20   30   40   50   60   70   80   90   100%
289s [----|----|----|----|----|----|----|----|----|----|
289s **************************************************|
289s Calculating feature variances of standardized and clipped values
289s 0%   10   20   30   40   50   60   70   80   90   100%
289s [----|----|----|----|----|----|----|----|----|----|
289s **************************************************|
289s 
  |                                                                            
  |                                                                      |   0%
  |                                                                            
  |======================================================================| 100%
289s Modularity Optimizer version 1.3.0 by Ludo Waltman and Nees Jan van Eck
289s 
289s Number of nodes: 80
289s Number of edges: 2045
289s 
289s Running Louvain algorithm...
289s 0%   10   20   30   40   50   60   70   80   90   100%
289s [----|----|----|----|----|----|----|----|----|----|
289s *************************************Maximum modularity in 10 random starts: -0.0613
289s Number of communities: 64
289s Elapsed time: 0 seconds
289s *************|
289s Performing log-normalization
289s 0%   10   20   30   40   50   60   70   80   90   100%
289s [----|----|----|----|----|----|----|----|----|----|
289s **************************************************|
290s 
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  |======================================================================| 100%
290s 
  |                                                                            
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291s 
  |                                                                            
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292s 
  |                                                                            
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  |======================================================================| 100%
293s 
  |                                                                            
  |                                                                      |   0%
  |                                                                            
  |======================================================================| 100%
293s [ FAIL 0 | WARN 1 | SKIP 30 | PASS 720 ]
293s 
293s ══ Skipped tests (30) ══════════════════════════════════════════════════════════
293s • {arrow} is not installed (1): 'test_load_10X.R:204:3'
293s • On CRAN (29): 'test_differential_expression.R:307:3',
293s   'test_differential_expression.R:349:3',
293s   'test_differential_expression.R:455:3', 'test_dimensional_reduction.R:55:3',
293s   'test_integratedata.R:111:3', 'test_integration.R:74:3',
293s   'test_integration.R:105:3', 'test_integration.R:136:3',
293s   'test_integration.R:170:3', 'test_integration.R:202:3',
293s   'test_integration.R:234:3', 'test_integration.R:264:3',
293s   'test_integration.R:306:3', 'test_integration.R:335:3',
293s   'test_integration.R:365:3', 'test_integration5.R:38:3',
293s   'test_integration5.R:331:3', 'test_objects.R:6:3',
293s   'test_preprocessing.R:140:3', 'test_preprocessing.R:158:3',
293s   'test_preprocessing.R:433:3', 'test_preprocessing.R:554:3',
293s   'test_read_mtx.R:4:3', 'test_read_mtx.R:18:3', 'test_transferdata.R:65:3',
293s   'test_transferdata.R:88:3', 'test_transferdata.R:100:3',
293s   'test_transferdata.R:112:3', 'test_transferdata.R:128:3'
293s 
293s [ FAIL 0 | WARN 1 | SKIP 30 | PASS 720 ]
294s > 
294s > 
294s > 
294s autopkgtest [05:55:46]: test run-unit-test: -----------------------]
294s run-unit-test        PASS
294s autopkgtest [05:55:46]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
295s autopkgtest [05:55:47]: test pkg-r-autopkgtest: preparing testbed
313s Creating nova instance adt-resolute-amd64-r-cran-seurat-20260210-055052-juju-7f2275-prod-proposed-migration-environment-20-a0885efb-d52e-4c04-a675-9d21a2ef4f4d from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
384s autopkgtest [05:57:16]: testbed dpkg architecture: amd64
384s autopkgtest [05:57:16]: testbed apt version: 3.1.14
385s autopkgtest [05:57:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup
385s autopkgtest [05:57:17]: testbed release detected to be: resolute
385s autopkgtest [05:57:17]: updating testbed package index (apt update)
385s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
385s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
385s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
385s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
386s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [178 kB]
386s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1727 kB]
386s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB]
386s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [266 kB]
386s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [219 kB]
386s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [6184 B]
386s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B]
386s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [792 kB]
386s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1787 kB]
386s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.5 kB]
386s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB]
386s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B]
386s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
387s Fetched 5197 kB in 1s (5111 kB/s)
388s Reading package lists...
388s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
388s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
388s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
388s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
389s Reading package lists...
389s Reading package lists...
389s Building dependency tree...
389s Reading state information...
389s Calculating upgrade...
389s The following package was automatically installed and is no longer required:
389s   libpython3.13
389s Use 'sudo apt autoremove' to remove it.
389s The following NEW packages will be installed:
389s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
389s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
389s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
389s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
389s The following packages will be upgraded:
389s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
389s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
389s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
389s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
389s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbrotli1 libbsd0
389s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
389s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
389s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
389s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
389s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
389s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
389s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
389s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
389s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
389s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
389s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
389s 91 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
389s Need to get 237 MB of archives.
389s After this operation, 339 MB of additional disk space will be used.
389s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
389s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
389s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
389s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
389s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
389s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
389s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
389s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
389s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
389s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
389s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
389s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
389s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
390s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
390s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
390s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
390s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
390s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
390s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
390s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
390s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
390s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
390s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
390s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
390s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
390s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
390s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
390s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
390s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
390s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
390s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
390s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
390s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
390s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
390s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
390s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
390s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
390s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
390s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
390s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
390s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
390s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
390s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
390s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
390s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
390s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
390s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
390s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
390s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
390s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
390s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
390s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
390s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
390s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
390s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
390s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
390s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
390s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
390s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
390s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
390s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
390s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
390s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
390s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
390s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
390s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
390s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
390s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
390s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
390s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
390s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
390s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli1 amd64 1.2.0-3 [343 kB]
390s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
390s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
390s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
390s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
390s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
390s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
390s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
390s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
390s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
390s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
390s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
394s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
394s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
394s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
394s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
394s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
394s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
394s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
394s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
394s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
394s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
394s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
394s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
394s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
394s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
394s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
394s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
394s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
394s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
395s dpkg-preconfigure: unable to re-open stdin: No such file or directory
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395s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
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395s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ...
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395s Setting up libattr1:amd64 (1:2.5.2-3build2) ...
395s Selecting previously unselected package gcc-16-base:amd64.
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396s Preparing to unpack .../00-libbsd0_0.12.2-2build2_amd64.deb ...
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397s Unpacking libglib2.0-data (2.87.2-2) over (2.86.3-4) ...
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397s Unpacking libidn2-0:amd64 (2.3.8-4build1) over (2.3.8-4) ...
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397s Unpacking libkeyutils1:amd64 (1.6.3-6ubuntu3) over (1.6.3-6ubuntu2) ...
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397s Unpacking python3-markdown-it (3.0.0-3build1) over (3.0.0-3) ...
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397s Unpacking busybox-static (1:1.37.0-7ubuntu1) over (1:1.37.0-4ubuntu1) ...
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397s Unpacking libdrm2:amd64 (2.4.131-1) over (2.4.129-1) ...
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397s Unpacking libgdbm6t64:amd64 (1.26-1build1) over (1.26-1) ...
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397s Unpacking pciutils (1:3.14.0-1build2) over (1:3.14.0-1build1) ...
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398s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ...
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398s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ...
398s Preparing to unpack .../61-hwdata_0.394-1build1_all.deb ...
398s Unpacking hwdata (0.394-1build1) over (0.394-1) ...
398s Preparing to unpack .../62-pnp.ids_0.394-1build1_all.deb ...
398s Unpacking pnp.ids (0.394-1build1) over (0.394-1) ...
398s Preparing to unpack .../63-libbrotli1_1.2.0-3_amd64.deb ...
398s Unpacking libbrotli1:amd64 (1.2.0-3) over (1.1.0-2build6) ...
398s Preparing to unpack .../64-libdrm-amdgpu1_2.4.131-1_amd64.deb ...
398s Unpacking libdrm-amdgpu1:amd64 (2.4.131-1) over (2.4.129-1) ...
398s Preparing to unpack .../65-libevent-core-2.1-7t64_2.1.12-stable-10build2_amd64.deb ...
398s Unpacking libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) over (2.1.12-stable-10build1) ...
398s Preparing to unpack .../66-libgdbm-compat4t64_1.26-1build1_amd64.deb ...
398s Unpacking libgdbm-compat4t64:amd64 (1.26-1build1) over (1.26-1) ...
398s Preparing to unpack .../67-libgudev-1.0-0_1%3a238-7build1_amd64.deb ...
398s Unpacking libgudev-1.0-0:amd64 (1:238-7build1) over (1:238-7) ...
398s Preparing to unpack .../68-libnpth0t64_1.8-3build1_amd64.deb ...
398s Unpacking libnpth0t64:amd64 (1.8-3build1) over (1.8-3) ...
398s Preparing to unpack .../69-libonig5_6.9.10-1build1_amd64.deb ...
398s Unpacking libonig5:amd64 (6.9.10-1build1) over (6.9.10-1) ...
398s Selecting previously unselected package libpython3.14-minimal:amd64.
398s Preparing to unpack .../70-libpython3.14-minimal_3.14.2-1_amd64.deb ...
398s Unpacking libpython3.14-minimal:amd64 (3.14.2-1) ...
398s Selecting previously unselected package libpython3.14-stdlib:amd64.
398s Preparing to unpack .../71-libpython3.14-stdlib_3.14.2-1_amd64.deb ...
398s Unpacking libpython3.14-stdlib:amd64 (3.14.2-1) ...
398s Selecting previously unselected package libpython3.14:amd64.
398s Preparing to unpack .../72-libpython3.14_3.14.2-1_amd64.deb ...
398s Unpacking libpython3.14:amd64 (3.14.2-1) ...
398s Preparing to unpack .../73-libwrap0_7.6.q-36build2_amd64.deb ...
398s Unpacking libwrap0:amd64 (7.6.q-36build2) over (7.6.q-36build1) ...
398s Selecting previously unselected package linux-modules-6.19.0-3-generic.
398s Preparing to unpack .../74-linux-modules-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
398s Unpacking linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
399s Selecting previously unselected package linux-image-6.19.0-3-generic.
399s Preparing to unpack .../75-linux-image-6.19.0-3-generic_6.19.0-3.3+1_amd64.deb ...
399s Unpacking linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
399s Preparing to unpack .../76-amd64-microcode_3.20251202.1ubuntu1_amd64.deb ...
399s Unpacking amd64-microcode (3.20251202.1ubuntu1) over (3.20250708.1ubuntu1) ...
399s Preparing to unpack .../77-linux-generic_6.19.0-3.3_amd64.deb ...
399s Unpacking linux-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
399s Preparing to unpack .../78-linux-image-generic_6.19.0-3.3_amd64.deb ...
399s Unpacking linux-image-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
399s Preparing to unpack .../79-linux-virtual_6.19.0-3.3_amd64.deb ...
399s Unpacking linux-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
399s Preparing to unpack .../80-linux-image-virtual_6.19.0-3.3_amd64.deb ...
399s Unpacking linux-image-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
399s Preparing to unpack .../81-linux-headers-virtual_6.19.0-3.3_amd64.deb ...
399s Unpacking linux-headers-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
399s Selecting previously unselected package linux-headers-6.19.0-3.
399s Preparing to unpack .../82-linux-headers-6.19.0-3_6.19.0-3.3_all.deb ...
399s Unpacking linux-headers-6.19.0-3 (6.19.0-3.3) ...
401s Selecting previously unselected package linux-headers-6.19.0-3-generic.
401s Preparing to unpack .../83-linux-headers-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
401s Unpacking linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
401s Preparing to unpack .../84-linux-headers-generic_6.19.0-3.3_amd64.deb ...
401s Unpacking linux-headers-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
401s Preparing to unpack .../85-linux-perf_6.19.0-3.3_amd64.deb ...
401s Unpacking linux-perf (6.19.0-3.3) over (6.18.0-9.9) ...
401s Preparing to unpack .../86-linux-tools-common_6.19.0-3.3_all.deb ...
401s Unpacking linux-tools-common (6.19.0-3.3) over (6.18.0-9.9) ...
401s Selecting previously unselected package linux-tools-6.19.0-3.
401s Preparing to unpack .../87-linux-tools-6.19.0-3_6.19.0-3.3_amd64.deb ...
401s Unpacking linux-tools-6.19.0-3 (6.19.0-3.3) ...
401s Selecting previously unselected package linux-tools-6.19.0-3-generic.
401s Preparing to unpack .../88-linux-tools-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
401s Unpacking linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
401s Preparing to unpack .../89-patch_2.8-2build1_amd64.deb ...
401s Unpacking patch (2.8-2build1) over (2.8-2) ...
401s Preparing to unpack .../90-pollinate_4.33-4ubuntu5_all.deb ...
401s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ...
401s Preparing to unpack .../91-python3-referencing_0.36.2-1ubuntu2_all.deb ...
401s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ...
401s Preparing to unpack .../92-ubuntu-kernel-accessories_1.564_amd64.deb ...
401s Unpacking ubuntu-kernel-accessories (1.564) over (1.563) ...
401s Setting up libip4tc2:amd64 (1.8.11-2ubuntu3) ...
401s Setting up 3cpio (0.14.0-1ubuntu1) ...
401s Setting up libxau6:amd64 (1:1.0.11-1build2) ...
401s Setting up libnpth0t64:amd64 (1.8-3build1) ...
401s Setting up libkeyutils1:amd64 (1.6.3-6ubuntu3) ...
401s Setting up ubuntu-kernel-accessories (1.564) ...
401s Setting up libgpm2:amd64 (1.20.7-12build1) ...
401s Setting up libgdbm6t64:amd64 (1.26-1build1) ...
401s Setting up linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
403s Setting up libgdbm-compat4t64:amd64 (1.26-1build1) ...
403s Setting up bpftool (7.7.0+6.19.0-3.3) ...
403s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ...
403s Setting up liblsof0 (4.99.4+dfsg-2build2) ...
403s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ...
403s Setting up libbrotli1:amd64 (1.2.0-3) ...
403s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ...
403s Setting up libsensors-config (1:3.6.2-2build1) ...
403s Setting up less (668-1build1) ...
403s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ...
403s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
403s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
403s amd64-microcode: microcode will be updated at next boot
403s Setting up man-db (2.13.1-1build1) ...
403s Updating database of manual pages ...
404s man-db.service is a disabled or a static unit not running, not starting it.
404s Setting up libjansson4:amd64 (2.14-2build4) ...
404s Setting up libglib2.0-data (2.87.2-2) ...
404s Setting up pollinate (4.33-4ubuntu5) ...
415s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
415s Setting up libwrap0:amd64 (7.6.q-36build2) ...
415s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
416s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
416s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
416s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
416s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
416s Setting up patch (2.8-2build1) ...
416s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
416s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
416s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
416s Setting up lsof (4.99.4+dfsg-2build2) ...
416s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
416s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
416s Setting up dracut-install (109-11ubuntu1) ...
416s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
416s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
416s Setting up pnp.ids (0.394-1build1) ...
416s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
416s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
416s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
416s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
416s Setting up mawk (1.3.4.20260129-1) ...
416s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
416s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
416s Setting up linux-image-virtual (6.19.0-3.3) ...
416s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
416s Setting up libbsd0:amd64 (0.12.2-2build2) ...
416s Setting up libdrm-common (2.4.131-1) ...
416s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
416s Setting up dbus-bin (1.16.2-2ubuntu3) ...
416s Setting up libonig5:amd64 (6.9.10-1build1) ...
416s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
416s Setting up ethtool (1:6.15-3build1) ...
416s Setting up python3-referencing (0.36.2-1ubuntu2) ...
416s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
416s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
416s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
416s Setting up tcpdump (4.99.5-2ubuntu3) ...
416s Setting up linux-image-generic (6.19.0-3.3) ...
416s Setting up wget (1.25.0-2ubuntu4) ...
416s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
416s Setting up iptables (1.8.11-2ubuntu3) ...
416s Setting up iproute2 (6.18.0-1ubuntu1) ...
416s Setting up linux-headers-generic (6.19.0-3.3) ...
416s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
416s Setting up hwdata (0.394-1build1) ...
416s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
416s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
416s No schema files found: doing nothing.
416s Setting up dbus (1.16.2-2ubuntu3) ...
416s A reboot is required to replace the running dbus-daemon.
416s Please reboot the system when convenient.
417s Setting up shared-mime-info (2.4-5build3) ...
417s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
417s Setting up pciutils (1:3.14.0-1build2) ...
417s Setting up python3-markdown-it (3.0.0-3build1) ...
417s Setting up libdrm2:amd64 (2.4.131-1) ...
417s Setting up libpython3.14:amd64 (3.14.2-1) ...
417s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
417s Setting up linux-tools-common (6.19.0-3.3) ...
417s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
417s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
417s Setting up apt (3.1.15) ...
418s Setting up linux-headers-virtual (6.19.0-3.3) ...
418s Setting up linux-generic (6.19.0-3.3) ...
418s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
418s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
418s Setting up ubuntu-standard (1.564) ...
418s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
418s Setting up linux-virtual (6.19.0-3.3) ...
418s Setting up linux-perf (6.19.0-3.3) ...
418s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
418s Processing triggers for debianutils (5.23.2build1) ...
418s Processing triggers for install-info (7.2-5) ...
418s Processing triggers for initramfs-tools (0.150ubuntu7) ...
418s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
422s Processing triggers for libc-bin (2.42-2ubuntu4) ...
422s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
422s /etc/kernel/postinst.d/initramfs-tools:
422s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
427s /etc/kernel/postinst.d/zz-update-grub:
427s Sourcing file `/etc/default/grub'
427s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
427s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
427s Generating grub configuration file ...
427s Found linux image: /boot/vmlinuz-6.19.0-3-generic
427s Found initrd image: /boot/initrd.img-6.19.0-3-generic
427s Found linux image: /boot/vmlinuz-6.18.0-9-generic
427s Found initrd image: /boot/initrd.img-6.18.0-9-generic
427s Warning: os-prober will not be executed to detect other bootable partitions.
427s Systems on them will not be added to the GRUB boot configuration.
427s Check GRUB_DISABLE_OS_PROBER documentation entry.
427s Adding boot menu entry for UEFI Firmware Settings ...
427s done
427s autopkgtest [05:57:59]: upgrading testbed (apt dist-upgrade and autopurge)
428s Reading package lists...
428s Building dependency tree...
428s Reading state information...
428s Calculating upgrade...
428s The following package was automatically installed and is no longer required:
428s   libpython3.13
428s Use 'sudo apt autoremove' to remove it.
428s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
428s Reading package lists...
428s Building dependency tree...
428s Reading state information...
428s Solving dependencies...
429s The following packages will be REMOVED:
429s   libpython3.13*
429s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
429s After this operation, 7599 kB disk space will be freed.
429s (Reading database ... 
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(Reading database ... 125273 files and directories currently installed.)
429s Removing libpython3.13:amd64 (3.13.11-1) ...
429s Processing triggers for libc-bin (2.42-2ubuntu4) ...
429s autopkgtest [05:58:01]: rebooting testbed after setup commands that affected boot
461s Reading package lists...
461s Building dependency tree...
461s Reading state information...
462s Solving dependencies...
462s The following NEW packages will be installed:
462s   build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu
462s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
462s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15
462s   g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15
462s   gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gfortran
462s   gfortran-15 gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu
462s   icu-devtools javascript-common libabsl20260107 libaec0 libamd3 libaom3
462s   libarmadillo15 libarpack2t64 libasan8 libavif16 libblas-dev libblas3
462s   libblosc1 libboost-dev libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev
462s   libcairo2 libcc1-0 libcfitsio10t64 libcolamd3 libcrypt-dev libdatrie1
462s   libdav1d7 libde265-0 libdeflate-dev libdeflate0 libfftw3-double3
462s   libfontconfig1 libfreexl1 libfyba0t64 libgav1-2 libgcc-15-dev libgdal38
462s   libgeos-c1t64 libgeos3.14.1 libgeotiff5 libgfortran-15-dev libgfortran5
462s   libgif7 libglpk40 libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b
462s   libhdf4-0 libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec
462s   libheif-plugin-libde265 libheif1 libhwasan0 libhwy1t64 libice6 libicu-dev
462s   libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev
462s   libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3
462s   libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables
462s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax
462s   libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify
462s   libjs-sifter.js libjs-twitter-bootstrap-datepicker libjxl0.11 libkmlbase1t64
462s   libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3 liblcms2-2 liblerc4
462s   liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64 libmpc3
462s   libmuparser2v5 libmysqlclient24 libncurses-dev libnetcdf22 libodbc2
462s   libodbcinst2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0
462s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0
462s   libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev
462s   libpoppler147 libpq5 libproj25 libqhull-r8.0 libquadmath0 libreadline-dev
462s   librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64
462s   libstdc++-15-dev libsuitesparseconfig7 libsuperlu7 libsz2 libtcl8.6
462s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1
462s   libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0
462s   libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 libyuv0
462s   libzstd-dev linux-libc-dev mysql-common node-bootstrap-sass node-html5shiv
462s   node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin
462s   proj-data r-base-core r-base-dev r-bioc-biobase r-bioc-biocgenerics
462s   r-bioc-biocio r-bioc-biocparallel r-bioc-biostrings r-bioc-delayedarray
462s   r-bioc-deseq2 r-bioc-genomeinfodb r-bioc-genomeinfodbdata
462s   r-bioc-genomicalignments r-bioc-genomicranges r-bioc-iranges r-bioc-limma
462s   r-bioc-matrixgenerics r-bioc-multtest r-bioc-rhtslib r-bioc-rsamtools
462s   r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray
462s   r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc
462s   r-cran-abind r-cran-ape r-cran-askpass r-cran-base64enc r-cran-bh
462s   r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr
462s   r-cran-caret r-cran-catools r-cran-class r-cran-classint r-cran-cli
462s   r-cran-clock r-cran-cluster r-cran-codetools r-cran-colourpicker
462s   r-cran-commonmark r-cran-conquer r-cran-cowplot r-cran-cpp11 r-cran-crayon
462s   r-cran-crosstalk r-cran-curl r-cran-data.table r-cran-dbi r-cran-deldir
462s   r-cran-deoptimr r-cran-desc r-cran-diagram r-cran-diffobj r-cran-digest
462s   r-cran-dotcall64 r-cran-dplyr r-cran-dqrng r-cran-e1071 r-cran-evaluate
462s   r-cran-fansi r-cran-farver r-cran-fastdummies r-cran-fastmap
462s   r-cran-fitdistrplus r-cran-fnn r-cran-fontawesome r-cran-foreach
462s   r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options
462s   r-cran-future r-cran-future.apply r-cran-gdata r-cran-generics
462s   r-cran-ggplot2 r-cran-ggrepel r-cran-ggridges r-cran-globals r-cran-glue
462s   r-cran-goftest r-cran-gower r-cran-gplots r-cran-gridextra r-cran-gtable
462s   r-cran-gtools r-cran-hardhat r-cran-here r-cran-highr r-cran-htmltools
462s   r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-ica r-cran-igraph
462s   r-cran-ipred r-cran-irlba r-cran-isoband r-cran-iterators r-cran-jquerylib
462s   r-cran-jsonlite r-cran-kernlab r-cran-kernsmooth r-cran-knitr
462s   r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lava
462s   r-cran-lazyeval r-cran-leidenbase r-cran-lifecycle r-cran-listenv
462s   r-cran-littler r-cran-lmtest r-cran-locfit r-cran-lubridate r-cran-magrittr
462s   r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels
462s   r-cran-matrixstats r-cran-memoise r-cran-metap r-cran-mime r-cran-miniui
462s   r-cran-mixtools r-cran-mnormt r-cran-modelmetrics r-cran-multcomp
462s   r-cran-mutoss r-cran-mvtnorm r-cran-nlme r-cran-nnet r-cran-numderiv
462s   r-cran-openssl r-cran-parallelly r-cran-patchwork r-cran-pbapply
462s   r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten
462s   r-cran-pkgload r-cran-plotly r-cran-plotrix r-cran-plyr r-cran-png
462s   r-cran-polyclip r-cran-praise r-cran-proc r-cran-processx r-cran-prodlim
462s   r-cran-progressr r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr
462s   r-cran-qqconf r-cran-quantreg r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils
462s   r-cran-r6 r-cran-rann r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer
462s   r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppeigen
462s   r-cran-rcpphnsw r-cran-rcppprogress r-cran-rcpptoml r-cran-rcurl
462s   r-cran-rdpack r-cran-recipes r-cran-reshape2 r-cran-restfulr
462s   r-cran-reticulate r-cran-rjson r-cran-rlang r-cran-rmarkdown
462s   r-cran-robustbase r-cran-rocr r-cran-rpart r-cran-rprojroot r-cran-rspectra
462s   r-cran-rsvd r-cran-rtsne r-cran-s2 r-cran-s7 r-cran-sandwich r-cran-sass
462s   r-cran-scales r-cran-scattermore r-cran-sctransform r-cran-segmented
462s   r-cran-seurat r-cran-seuratobject r-cran-sf r-cran-shape r-cran-shiny
462s   r-cran-shinyjs r-cran-sitmo r-cran-sn r-cran-snow r-cran-sourcetools
462s   r-cran-sp r-cran-spam r-cran-sparsem r-cran-sparsevctrs r-cran-spatstat.data
462s   r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random
462s   r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils
462s   r-cran-squarem r-cran-statmod r-cran-stringi r-cran-stringr r-cran-survival
462s   r-cran-sys r-cran-tensor r-cran-testthat r-cran-tfisher r-cran-th.data
462s   r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange
462s   r-cran-timedate r-cran-tinytex r-cran-tzdb r-cran-units r-cran-utf8
462s   r-cran-uwot r-cran-vctrs r-cran-vgam r-cran-viridislite r-cran-waldo
462s   r-cran-withr r-cran-wk r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml
462s   r-cran-zoo rpcsvc-proto unixodbc-common unzip x11-common xdg-utils zip
462s   zlib1g-dev
462s 0 upgraded, 454 newly installed, 0 to remove and 0 not upgraded.
462s Need to get 521 MB of archives.
462s After this operation, 1530 MB of additional disk space will be used.
462s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
462s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
462s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
462s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
462s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
462s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
462s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
462s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
462s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
462s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
462s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
462s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
462s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
462s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
462s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
462s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
463s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
463s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
463s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
463s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
463s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
463s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
464s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
464s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
464s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
464s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
464s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
464s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
464s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
464s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
464s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
464s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
464s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
464s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
464s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
464s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
464s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
464s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
464s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
464s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
464s Get:41 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-data all 3.12.1+dfsg-1 [278 kB]
464s Get:42 http://ftpmaster.internal/ubuntu resolute/universe amd64 gdal-plugins amd64 3.12.1+dfsg-1 [26.8 kB]
464s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
464s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
464s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
465s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
465s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
465s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
465s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
465s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
465s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libabsl20260107 amd64 20260107.0-1 [587 kB]
465s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB]
465s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libsuitesparseconfig7 amd64 1:7.12.1+dfsg-1 [22.0 kB]
465s Get:54 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd3 amd64 1:7.12.1+dfsg-1 [35.8 kB]
465s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libaom3 amd64 3.13.1-2 [1970 kB]
465s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
465s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
465s Get:58 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2t64 amd64 3.9.1-6 [108 kB]
465s Get:59 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu7 amd64 7.0.1+dfsg1-2 [186 kB]
465s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarmadillo15 amd64 1:15.2.1+dfsg-2 [109 kB]
465s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdav1d7 amd64 1.5.3-1 [626 kB]
465s Get:62 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgav1-2 amd64 0.20.0-2build1 [402 kB]
465s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
465s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
465s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libyuv0 amd64 0.0.1922.20260106-1 [184 kB]
465s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 libavif16 amd64 1.3.0-1ubuntu3 [117 kB]
465s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
465s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.8 kB]
465s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc1 amd64 1.21.5+ds-2 [35.8 kB]
465s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB]
466s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B]
466s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
466s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
466s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
466s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
466s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
466s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
466s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcfitsio10t64 amd64 4.6.3-1 [549 kB]
466s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libcolamd3 amd64 1:7.12.1+dfsg-1 [27.4 kB]
466s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
466s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libde265-0 amd64 1.0.16-1build1 [172 kB]
466s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
466s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
466s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build2 [860 kB]
466s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfyba0t64 amd64 4.1.1-11build2 [120 kB]
466s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [23.5 kB]
466s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfreexl1 amd64 2.0.0-1build3 [42.9 kB]
466s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos3.14.1 amd64 3.14.1-2 [976 kB]
466s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeos-c1t64 amd64 3.14.1-2 [116 kB]
466s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 proj-data all 9.7.1-1 [7950 kB]
466s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
466s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
466s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
466s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
466s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
466s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 libproj25 amd64 9.7.1-1 [1499 kB]
466s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgeotiff5 amd64 1.7.4-1build1 [61.5 kB]
466s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libgif7 amd64 5.2.2-1ubuntu3 [36.0 kB]
466s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB]
466s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf4-0 amd64 4.3.1-2 [318 kB]
466s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB]
466s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-aomdec amd64 1.21.2-1 [14.2 kB]
466s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif-plugin-libde265 amd64 1.21.2-1 [9978 B]
466s Get:104 http://ftpmaster.internal/ubuntu resolute/main amd64 libheif1 amd64 1.21.2-1 [544 kB]
466s Get:105 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwy1t64 amd64 1.3.0-2 [768 kB]
466s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 liblcms2-2 amd64 2.17-1 [170 kB]
466s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libjxl0.11 amd64 0.11.1-6ubuntu1 [1122 kB]
467s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 liburiparser1 amd64 0.9.8+dfsg-2 [46.8 kB]
467s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlbase1t64 amd64 1.3.0-13 [51.7 kB]
467s Get:110 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmldom1t64 amd64 1.3.0-13 [156 kB]
467s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkmlengine1t64 amd64 1.3.0-13 [74.1 kB]
467s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmuparser2v5 amd64 2.3.4-2 [143 kB]
467s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 mysql-common all 5.8+1.1.1ubuntu2 [7002 B]
467s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libmysqlclient24 amd64 8.4.8-0ubuntu1 [1258 kB]
467s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB]
467s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnetcdf22 amd64 1:4.9.3-1build1 [561 kB]
467s Get:117 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl7 amd64 2.5.4-9 [43.7 kB]
467s Get:118 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbc2 amd64 2.3.14-1 [160 kB]
467s Get:119 http://ftpmaster.internal/ubuntu resolute/main amd64 unixodbc-common all 2.3.14-1 [8792 B]
467s Get:120 http://ftpmaster.internal/ubuntu resolute/main amd64 libodbcinst2 amd64 2.3.14-1 [32.0 kB]
467s Get:121 http://ftpmaster.internal/ubuntu resolute/main amd64 libopenjp2-7 amd64 2.5.4-1 [188 kB]
467s Get:122 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpgmepp6t64 amd64 1.24.2-3ubuntu2 [124 kB]
467s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 libpoppler147 amd64 25.03.0-11.1 [1224 kB]
467s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 libpq5 amd64 18.1-2 [155 kB]
467s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqhull-r8.0 amd64 2020.2-8 [197 kB]
467s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 librttopo1 amd64 1.1.0-4build1 [189 kB]
467s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspatialite8t64 amd64 5.1.0-3ubuntu1 [1927 kB]
467s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3build2 [991 kB]
467s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgdal38 amd64 3.12.1+dfsg-1 [11.4 MB]
467s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 libglpk40 amd64 5.0-2 [380 kB]
467s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
467s Get:132 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
467s Get:133 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
467s Get:134 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
467s Get:135 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
468s Get:136 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
468s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
468s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
468s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
468s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
468s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
468s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
468s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
468s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
468s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
468s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
468s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
468s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
468s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
468s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
468s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
468s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
468s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
468s Get:154 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
468s Get:155 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
468s Get:156 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
468s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
468s Get:158 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
468s Get:159 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
468s Get:160 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
468s Get:161 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
468s Get:162 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
468s Get:163 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
468s Get:164 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
468s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
468s Get:166 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
468s Get:167 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
468s Get:168 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
468s Get:169 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
468s Get:170 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
468s Get:171 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
468s Get:172 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
468s Get:173 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
468s Get:174 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
468s Get:175 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
468s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-data all 2.2.28-8 [19.3 kB]
468s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 libudunits2-0 amd64 2.2.28-8 [54.6 kB]
468s Get:178 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
468s Get:179 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
468s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
468s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
468s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
468s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
468s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
469s Get:185 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
469s Get:186 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
469s Get:187 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
469s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
470s Get:189 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
470s Get:190 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
470s Get:191 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
470s Get:192 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
470s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
470s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
470s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB]
470s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB]
471s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB]
471s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB]
471s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB]
471s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB]
471s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB]
471s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB]
471s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB]
471s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
471s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B]
471s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
471s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB]
471s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB]
471s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
471s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB]
471s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
471s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
471s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
471s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB]
471s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB]
471s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB]
471s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
471s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
471s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
471s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
472s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
472s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
472s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB]
472s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB]
472s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
472s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
472s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB]
472s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
472s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB]
472s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB]
472s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB]
472s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB]
472s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB]
472s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-locfit amd64 1.5-9.12-1 [552 kB]
472s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
472s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
472s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
473s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
473s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
473s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
473s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB]
473s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
473s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
473s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
473s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
473s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
473s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
473s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
473s Get:249 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB]
473s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
473s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
473s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
473s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB]
473s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1250 kB]
473s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
474s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB]
474s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB]
474s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB]
474s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB]
474s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB]
474s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB]
474s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
474s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-multtest amd64 2.62.0-2 [844 kB]
474s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml amd64 3.99-0.20-1 [1751 kB]
474s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB]
474s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB]
474s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
474s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB]
474s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rtracklayer amd64 1.66.0-3 [5225 kB]
475s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
475s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
475s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ape amd64 5.8-1-1 [2918 kB]
475s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
475s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB]
475s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
475s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
475s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
475s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
475s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
475s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
475s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
475s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
475s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
475s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
475s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
475s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
475s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB]
475s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
475s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-e1071 amd64 1.7-17-1 [579 kB]
475s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
475s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
475s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
475s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build2 [155 kB]
475s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
475s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB]
475s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
475s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
475s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
475s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
475s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
475s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
475s Get:302 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
475s Get:303 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
475s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
475s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tzdb amd64 0.5.0-1 [538 kB]
475s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clock amd64 0.7.2-1 [1903 kB]
475s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB]
475s Get:308 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsevctrs amd64 0.2.0-2 [170 kB]
476s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hardhat all 1.4.2+dfsg-1 [596 kB]
476s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB]
476s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB]
476s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB]
476s Get:313 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB]
476s Get:314 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB]
476s Get:315 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-globals all 0.19.0-1 [160 kB]
476s Get:316 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB]
476s Get:317 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB]
476s Get:318 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB]
476s Get:319 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
476s Get:320 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-numderiv all 2016.8-1.1-3build1 [116 kB]
476s Get:321 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB]
476s Get:322 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-squarem all 2021.1-1build1 [180 kB]
476s Get:323 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lava all 1.8.2+dfsg-1 [2210 kB]
476s Get:324 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB]
476s Get:325 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB]
476s Get:326 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timechange amd64 0.3.0-2 [201 kB]
476s Get:327 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB]
476s Get:328 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
476s Get:329 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
476s Get:330 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
476s Get:331 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
476s Get:332 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timedate amd64 4052.112-1 [1298 kB]
476s Get:333 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
476s Get:334 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB]
476s Get:335 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB]
477s Get:336 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-catools amd64 1.18.3-1 [209 kB]
477s Get:337 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-classint amd64 0.4-11+dfsg-1 [108 kB]
477s Get:338 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cluster amd64 2.1.8.2-1 [570 kB]
477s Get:339 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
477s Get:340 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
477s Get:341 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
477s Get:342 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
477s Get:343 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
477s Get:344 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
477s Get:345 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
477s Get:346 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
477s Get:347 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
477s Get:348 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
477s Get:349 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
477s Get:350 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
477s Get:351 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
477s Get:352 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
477s Get:353 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
477s Get:354 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
477s Get:355 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
477s Get:356 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
477s Get:357 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-miniui all 0.1.2-1 [37.3 kB]
477s Get:358 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shinyjs all 2.1.0-1build1 [967 kB]
477s Get:359 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB]
477s Get:360 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB]
477s Get:361 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
477s Get:362 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
477s Get:363 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crosstalk all 1.2.2+dfsg-1 [181 kB]
477s Get:364 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB]
477s Get:365 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB]
477s Get:366 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deoptimr all 1.1-4-1 [76.7 kB]
477s Get:367 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB]
477s Get:368 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB]
477s Get:369 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dotcall64 amd64 1.2-1 [36.8 kB]
477s Get:370 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sitmo amd64 2.0.2-1build1 [133 kB]
477s Get:371 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB]
477s Get:372 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastdummies all 1.7.5-1 [51.1 kB]
477s Get:373 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fitdistrplus all 1.2-6-1 [2764 kB]
478s Get:374 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB]
478s Get:375 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtools amd64 3.9.5-1build1 [345 kB]
478s Get:376 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gdata all 3.0.1-1build1 [491 kB]
478s Get:377 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB]
478s Get:378 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggridges all 0.5.7-1 [2214 kB]
478s Get:379 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-goftest amd64 1.2-3-1build1 [60.5 kB]
478s Get:380 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gplots all 3.3.0-1 [3825 kB]
478s Get:381 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB]
478s Get:382 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB]
478s Get:383 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-here all 1.0.2-1 [51.5 kB]
478s Get:384 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ica all 1.0-3-1 [85.4 kB]
478s Get:385 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-igraph amd64 2.1.4-1build1 [5218 kB]
478s Get:386 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB]
478s Get:387 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernlab amd64 0.9-33-1 [1947 kB]
478s Get:388 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-leidenbase amd64 0.1.32-1 [2512 kB]
478s Get:389 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-zoo amd64 1.8-15-1 [1025 kB]
478s Get:390 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lmtest amd64 0.9.40-1build1 [400 kB]
478s Get:391 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mathjaxr all 2.0-0-1 [2396 kB]
478s Get:392 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixmodels all 0.5-4-1 [351 kB]
478s Get:393 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
478s Get:394 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB]
478s Get:395 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mnormt amd64 2.1.2-1 [176 kB]
478s Get:396 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB]
478s Get:397 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quantreg amd64 6.1-1 [1455 kB]
478s Get:398 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sn all 2.1.2-1 [1823 kB]
478s Get:399 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mvtnorm amd64 1.3-3-1build1 [921 kB]
478s Get:400 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tfisher all 0.2.0-3build1 [80.8 kB]
479s Get:401 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plotrix all 3.8-13-1 [1137 kB]
479s Get:402 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-th.data all 1.1-5-1 [8740 kB]
479s Get:403 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sandwich all 3.1-1-1build1 [1483 kB]
479s Get:404 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-multcomp all 1.4-29-1 [617 kB]
479s Get:405 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mutoss all 0.1-14-1 [1262 kB]
479s Get:406 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-robustbase amd64 0.99-7-1 [3074 kB]
479s Get:407 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [157 kB]
479s Get:408 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-metap all 1.13-1 [600 kB]
479s Get:409 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plotly all 4.10.4+dfsg-4 [3635 kB]
479s Get:410 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-segmented all 2.1-4-1 [1376 kB]
479s Get:411 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mixtools amd64 2.0.0.1-1 [1414 kB]
479s Get:412 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-patchwork all 1.3.0-1 [3220 kB]
479s Get:413 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pbapply all 1.7-2-1 [102 kB]
479s Get:414 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB]
479s Get:415 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB]
479s Get:416 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB]
479s Get:417 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-polyclip amd64 1.10-7-1 [116 kB]
479s Get:418 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB]
479s Get:419 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
479s Get:420 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.oo all 1.27.1-1 [978 kB]
480s Get:421 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.utils all 2.13.0-1 [1423 kB]
480s Get:422 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rann amd64 2.6.2-1 [46.3 kB]
480s Get:423 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB]
480s Get:424 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
480s Get:425 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpphnsw amd64 0.6.0+ds-1 [185 kB]
480s Get:426 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppprogress all 0.4.2-2build2 [23.0 kB]
480s Get:427 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpptoml amd64 0.2.3+dfsg-1 [118 kB]
480s Get:428 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reticulate amd64 1.41.0.1+dfsg-1 [1306 kB]
480s Get:429 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rocr all 1.0-12-1 [465 kB]
480s Get:430 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB]
480s Get:431 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rsvd all 1.0.5-1build1 [3595 kB]
480s Get:432 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB]
480s Get:433 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-wk amd64 0.9.4-1 [1791 kB]
480s Get:434 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s2 amd64 1.1.9-1build1 [1815 kB]
480s Get:435 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB]
480s Get:436 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sctransform amd64 0.4.1-1 [504 kB]
480s Get:437 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1444 kB]
480s Get:438 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spam amd64 2.11-1-1 [2756 kB]
480s Get:439 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-seuratobject amd64 5.0.2-1 [1744 kB]
480s Get:440 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.utils amd64 3.1-3-1 [387 kB]
480s Get:441 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.data all 3.1-6-1 [4153 kB]
480s Get:442 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.univar amd64 3.1-2-1 [315 kB]
480s Get:443 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.geom amd64 3.3-6-1 [3968 kB]
481s Get:444 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.random amd64 3.3-3-1 [1177 kB]
481s Get:445 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tensor all 1.5-4build1 [16.3 kB]
481s Get:446 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [221 kB]
481s Get:447 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatstat.explore amd64 3.3-4-1 [3347 kB]
481s Get:448 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-uwot amd64 0.2.3-1 [1080 kB]
481s Get:449 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-seurat amd64 5.2.1-5 [3293 kB]
481s Get:450 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-units amd64 0.8-7+dfsg-2 [300 kB]
481s Get:451 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sf amd64 1.0-19+dfsg-2build2 [3298 kB]
481s Get:452 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB]
481s Get:453 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB]
481s Get:454 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vgam amd64 1.1-13-1 [7789 kB]
482s Preconfiguring packages ...
482s Fetched 521 MB in 19s (26.8 MB/s)
482s Selecting previously unselected package libc-dev-bin.
482s (Reading database ... 
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(Reading database ... 125269 files and directories currently installed.)
482s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
482s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
482s Selecting previously unselected package linux-libc-dev:amd64.
482s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ...
482s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
483s Selecting previously unselected package libcrypt-dev:amd64.
483s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
483s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
483s Selecting previously unselected package rpcsvc-proto.
483s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
483s Unpacking rpcsvc-proto (1.4.3-1build1) ...
483s Selecting previously unselected package libc6-dev:amd64.
483s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ...
483s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
483s Selecting previously unselected package libisl23:amd64.
483s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ...
483s Unpacking libisl23:amd64 (0.27-1build1) ...
483s Selecting previously unselected package libmpc3:amd64.
483s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ...
483s Unpacking libmpc3:amd64 (1.3.1-2) ...
483s Selecting previously unselected package cpp-15-x86-64-linux-gnu.
483s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
483s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
483s Selecting previously unselected package cpp-15.
483s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ...
483s Unpacking cpp-15 (15.2.0-12ubuntu1) ...
483s Selecting previously unselected package cpp-x86-64-linux-gnu.
483s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
483s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
483s Selecting previously unselected package cpp.
483s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ...
483s Unpacking cpp (4:15.2.0-4ubuntu1) ...
483s Selecting previously unselected package libcc1-0:amd64.
483s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package libgomp1:amd64.
483s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package libitm1:amd64.
483s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package libasan8:amd64.
483s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package liblsan0:amd64.
483s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package libtsan2:amd64.
483s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package libubsan1:amd64.
483s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package libhwasan0:amd64.
483s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ...
483s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ...
483s Selecting previously unselected package libquadmath0:amd64.
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485s Selecting previously unselected package libjpeg-turbo8:amd64.
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485s Selecting previously unselected package libsnappy1v5:amd64.
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486s Selecting previously unselected package libpixman-1-0:amd64.
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486s Selecting previously unselected package libxrender1:amd64.
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486s Selecting previously unselected package libfreexl1:amd64.
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486s Selecting previously unselected package libgeos3.14.1:amd64.
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487s Selecting previously unselected package libtiff6:amd64.
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487s Selecting previously unselected package libgeotiff5:amd64.
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487s Selecting previously unselected package libgif7:amd64.
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487s Selecting previously unselected package libhdf4-0:amd64.
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487s Selecting previously unselected package libheif-plugin-aomdec:amd64.
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487s Selecting previously unselected package libhwy1t64:amd64.
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487s Selecting previously unselected package liburiparser1:amd64.
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487s Selecting previously unselected package libkmlbase1t64:amd64.
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487s Selecting previously unselected package libmuparser2v5:amd64.
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487s Selecting previously unselected package mysql-common.
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487s Selecting previously unselected package libmysqlclient24:amd64.
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487s Selecting previously unselected package libhdf5-hl-310:amd64.
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487s Selecting previously unselected package libnetcdf22:amd64.
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487s Selecting previously unselected package libodbc2:amd64.
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487s Selecting previously unselected package unixodbc-common.
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487s Selecting previously unselected package libodbcinst2:amd64.
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487s Selecting previously unselected package libopenjp2-7:amd64.
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488s Selecting previously unselected package libpcre2-16-0:amd64.
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490s Selecting previously unselected package r-bioc-biocparallel.
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490s Preparing to unpack .../224-r-cran-matrix_1.7-4-1_amd64.deb ...
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491s Selecting previously unselected package r-cran-matrixstats.
491s Preparing to unpack .../225-r-cran-matrixstats_1.5.0-1_amd64.deb ...
491s Unpacking r-cran-matrixstats (1.5.0-1) ...
491s Selecting previously unselected package r-bioc-matrixgenerics.
491s Preparing to unpack .../226-r-bioc-matrixgenerics_1.18.1-1_all.deb ...
491s Unpacking r-bioc-matrixgenerics (1.18.1-1) ...
491s Selecting previously unselected package r-cran-abind.
491s Preparing to unpack .../227-r-cran-abind_1.4-8-1build1_all.deb ...
491s Unpacking r-cran-abind (1.4-8-1build1) ...
491s Selecting previously unselected package r-bioc-s4arrays.
491s Preparing to unpack .../228-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ...
491s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ...
491s Selecting previously unselected package r-bioc-sparsearray.
491s Preparing to unpack .../229-r-bioc-sparsearray_1.6.2+dfsg-2_amd64.deb ...
491s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ...
491s Selecting previously unselected package r-bioc-delayedarray.
491s Preparing to unpack .../230-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ...
491s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ...
491s Selecting previously unselected package r-bioc-genomicranges.
491s Preparing to unpack .../231-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ...
491s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ...
491s Selecting previously unselected package r-bioc-summarizedexperiment.
491s Preparing to unpack .../232-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ...
491s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
491s Selecting previously unselected package r-cran-locfit.
491s Preparing to unpack .../233-r-cran-locfit_1.5-9.12-1_amd64.deb ...
491s Unpacking r-cran-locfit (1.5-9.12-1) ...
491s Selecting previously unselected package r-cran-cli.
491s Preparing to unpack .../234-r-cran-cli_3.6.4-1_amd64.deb ...
491s Unpacking r-cran-cli (3.6.4-1) ...
491s Selecting previously unselected package r-cran-glue.
491s Preparing to unpack .../235-r-cran-glue_1.8.0-1_amd64.deb ...
491s Unpacking r-cran-glue (1.8.0-1) ...
491s Selecting previously unselected package r-cran-rlang.
491s Preparing to unpack .../236-r-cran-rlang_1.1.5-3_amd64.deb ...
491s Unpacking r-cran-rlang (1.1.5-3) ...
491s Selecting previously unselected package r-cran-lifecycle.
491s Preparing to unpack .../237-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
491s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
491s Selecting previously unselected package r-cran-gtable.
491s Preparing to unpack .../238-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
491s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
491s Selecting previously unselected package r-cran-isoband.
491s Preparing to unpack .../239-r-cran-isoband_0.2.7-1_amd64.deb ...
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491s Selecting previously unselected package r-cran-s7.
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491s Selecting previously unselected package r-cran-farver.
491s Preparing to unpack .../241-r-cran-farver_2.1.2-1_amd64.deb ...
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491s Selecting previously unselected package r-cran-labeling.
491s Preparing to unpack .../242-r-cran-labeling_0.4.3-1_all.deb ...
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491s Selecting previously unselected package r-cran-rcolorbrewer.
491s Preparing to unpack .../243-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ...
491s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ...
491s Selecting previously unselected package r-cran-viridislite.
491s Preparing to unpack .../244-r-cran-viridislite_0.4.3-1_all.deb ...
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491s Selecting previously unselected package r-cran-scales.
491s Preparing to unpack .../245-r-cran-scales_1.4.0-1_all.deb ...
491s Unpacking r-cran-scales (1.4.0-1) ...
491s Selecting previously unselected package r-cran-vctrs.
491s Preparing to unpack .../246-r-cran-vctrs_0.6.5-1_amd64.deb ...
491s Unpacking r-cran-vctrs (0.6.5-1) ...
491s Selecting previously unselected package r-cran-withr.
491s Preparing to unpack .../247-r-cran-withr_3.0.2+dfsg-1_all.deb ...
491s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
491s Selecting previously unselected package r-cran-ggplot2.
491s Preparing to unpack .../248-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ...
491s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ...
491s Selecting previously unselected package r-cran-littler.
491s Preparing to unpack .../249-r-cran-littler_0.3.22-1_amd64.deb ...
491s Unpacking r-cran-littler (0.3.22-1) ...
491s Selecting previously unselected package r-cran-pkgkitten.
491s Preparing to unpack .../250-r-cran-pkgkitten_0.2.4-1_all.deb ...
491s Unpacking r-cran-pkgkitten (0.2.4-1) ...
491s Selecting previously unselected package r-cran-rcpp.
491s Preparing to unpack .../251-r-cran-rcpp_1.1.0-1_amd64.deb ...
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491s Selecting previously unselected package r-cran-rcpparmadillo.
491s Preparing to unpack .../252-r-cran-rcpparmadillo_15.2.3-1-1_amd64.deb ...
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491s Selecting previously unselected package r-bioc-deseq2.
491s Preparing to unpack .../253-r-bioc-deseq2_1.46.0+dfsg-2_amd64.deb ...
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491s Selecting previously unselected package r-cran-bitops.
491s Preparing to unpack .../254-r-cran-bitops_1.0-9-1_amd64.deb ...
491s Unpacking r-cran-bitops (1.0-9-1) ...
491s Selecting previously unselected package r-bioc-rhtslib.
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491s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ...
491s Selecting previously unselected package r-bioc-rsamtools.
491s Preparing to unpack .../256-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ...
491s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ...
491s Selecting previously unselected package r-bioc-genomicalignments.
491s Preparing to unpack .../257-r-bioc-genomicalignments_1.42.0-2_amd64.deb ...
491s Unpacking r-bioc-genomicalignments (1.42.0-2) ...
491s Selecting previously unselected package r-cran-statmod.
491s Preparing to unpack .../258-r-cran-statmod_1.5.0-1_amd64.deb ...
491s Unpacking r-cran-statmod (1.5.0-1) ...
491s Selecting previously unselected package r-bioc-limma.
491s Preparing to unpack .../259-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ...
491s Unpacking r-bioc-limma (3.62.2+dfsg-1) ...
492s Selecting previously unselected package r-cran-survival.
492s Preparing to unpack .../260-r-cran-survival_3.8-6-1_amd64.deb ...
492s Unpacking r-cran-survival (3.8-6-1) ...
492s Selecting previously unselected package r-cran-mass.
492s Preparing to unpack .../261-r-cran-mass_7.3-65-1_amd64.deb ...
492s Unpacking r-cran-mass (7.3-65-1) ...
492s Selecting previously unselected package r-bioc-multtest.
492s Preparing to unpack .../262-r-bioc-multtest_2.62.0-2_amd64.deb ...
492s Unpacking r-bioc-multtest (2.62.0-2) ...
492s Selecting previously unselected package r-cran-xml.
492s Preparing to unpack .../263-r-cran-xml_3.99-0.20-1_amd64.deb ...
492s Unpacking r-cran-xml (3.99-0.20-1) ...
492s Selecting previously unselected package r-cran-rcurl.
492s Preparing to unpack .../264-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ...
492s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ...
492s Selecting previously unselected package r-cran-rjson.
492s Preparing to unpack .../265-r-cran-rjson_0.2.23-1_amd64.deb ...
492s Unpacking r-cran-rjson (0.2.23-1) ...
492s Selecting previously unselected package r-cran-yaml.
492s Preparing to unpack .../266-r-cran-yaml_2.3.10-1_amd64.deb ...
492s Unpacking r-cran-yaml (2.3.10-1) ...
492s Selecting previously unselected package r-cran-restfulr.
492s Preparing to unpack .../267-r-cran-restfulr_0.0.15-1_amd64.deb ...
492s Unpacking r-cran-restfulr (0.0.15-1) ...
492s Selecting previously unselected package r-bioc-rtracklayer.
492s Preparing to unpack .../268-r-bioc-rtracklayer_1.66.0-3_amd64.deb ...
492s Unpacking r-bioc-rtracklayer (1.66.0-3) ...
492s Selecting previously unselected package r-cran-nlme.
492s Preparing to unpack .../269-r-cran-nlme_3.1.168-1_amd64.deb ...
492s Unpacking r-cran-nlme (3.1.168-1) ...
492s Selecting previously unselected package r-cran-digest.
492s Preparing to unpack .../270-r-cran-digest_0.6.39-1_amd64.deb ...
492s Unpacking r-cran-digest (0.6.39-1) ...
492s Selecting previously unselected package r-cran-ape.
492s Preparing to unpack .../271-r-cran-ape_5.8-1-1_amd64.deb ...
492s Unpacking r-cran-ape (5.8-1-1) ...
492s Selecting previously unselected package r-cran-base64enc.
492s Preparing to unpack .../272-r-cran-base64enc_0.1-3-3build1_amd64.deb ...
492s Unpacking r-cran-base64enc (0.1-3-3build1) ...
492s Selecting previously unselected package r-cran-brio.
492s Preparing to unpack .../273-r-cran-brio_1.1.5-1_amd64.deb ...
492s Unpacking r-cran-brio (1.1.5-1) ...
492s Selecting previously unselected package r-cran-fastmap.
492s Preparing to unpack .../274-r-cran-fastmap_1.2.0-1_amd64.deb ...
492s Unpacking r-cran-fastmap (1.2.0-1) ...
492s Selecting previously unselected package r-cran-cachem.
492s Preparing to unpack .../275-r-cran-cachem_1.1.0-1_amd64.deb ...
492s Unpacking r-cran-cachem (1.1.0-1) ...
492s Selecting previously unselected package r-cran-htmltools.
492s Preparing to unpack .../276-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
492s Unpacking r-cran-htmltools (0.5.8.1-1) ...
492s Selecting previously unselected package r-cran-jquerylib.
492s Preparing to unpack .../277-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ...
492s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ...
492s Selecting previously unselected package r-cran-memoise.
492s Preparing to unpack .../278-r-cran-memoise_2.0.1-1build1_all.deb ...
492s Unpacking r-cran-memoise (2.0.1-1build1) ...
492s Selecting previously unselected package r-cran-fs.
492s Preparing to unpack .../279-r-cran-fs_1.6.5+dfsg-1_amd64.deb ...
492s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
492s Selecting previously unselected package r-cran-rappdirs.
492s Preparing to unpack .../280-r-cran-rappdirs_0.3.3-1build1_amd64.deb ...
492s Unpacking r-cran-rappdirs (0.3.3-1build1) ...
492s Selecting previously unselected package r-cran-sass.
492s Preparing to unpack .../281-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
492s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
492s Selecting previously unselected package r-cran-bslib.
492s Preparing to unpack .../282-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
492s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
492s Selecting previously unselected package r-cran-ps.
492s Preparing to unpack .../283-r-cran-ps_1.9.0-1_amd64.deb ...
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492s Selecting previously unselected package r-cran-processx.
492s Preparing to unpack .../284-r-cran-processx_3.8.6-1_amd64.deb ...
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492s Selecting previously unselected package r-cran-callr.
492s Preparing to unpack .../285-r-cran-callr_3.7.6-1_all.deb ...
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492s Selecting previously unselected package r-cran-class.
492s Preparing to unpack .../286-r-cran-class_7.3-23-1_amd64.deb ...
492s Unpacking r-cran-class (7.3-23-1) ...
492s Selecting previously unselected package r-cran-proxy.
492s Preparing to unpack .../287-r-cran-proxy_0.4-27-1_amd64.deb ...
492s Unpacking r-cran-proxy (0.4-27-1) ...
492s Selecting previously unselected package r-cran-e1071.
492s Preparing to unpack .../288-r-cran-e1071_1.7-17-1_amd64.deb ...
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492s Selecting previously unselected package r-cran-iterators.
492s Preparing to unpack .../289-r-cran-iterators_1.0.14-1build1_all.deb ...
492s Unpacking r-cran-iterators (1.0.14-1build1) ...
492s Selecting previously unselected package r-cran-foreach.
492s Preparing to unpack .../290-r-cran-foreach_1.5.2-1build1_all.deb ...
492s Unpacking r-cran-foreach (1.5.2-1build1) ...
492s Selecting previously unselected package r-cran-data.table.
492s Preparing to unpack .../291-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ...
492s Unpacking r-cran-data.table (1.17.0+dfsg-1) ...
492s Selecting previously unselected package r-cran-modelmetrics.
492s Preparing to unpack .../292-r-cran-modelmetrics_1.2.2.2-1build2_amd64.deb ...
492s Unpacking r-cran-modelmetrics (1.2.2.2-1build2) ...
492s Selecting previously unselected package r-cran-plyr.
492s Preparing to unpack .../293-r-cran-plyr_1.8.9-1_amd64.deb ...
492s Unpacking r-cran-plyr (1.8.9-1) ...
492s Selecting previously unselected package r-cran-proc.
492s Preparing to unpack .../294-r-cran-proc_1.18.5-1_amd64.deb ...
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492s Selecting previously unselected package r-cran-generics.
492s Preparing to unpack .../295-r-cran-generics_0.1.4-1_all.deb ...
492s Unpacking r-cran-generics (0.1.4-1) ...
492s Selecting previously unselected package r-cran-magrittr.
492s Preparing to unpack .../296-r-cran-magrittr_2.0.3-1_amd64.deb ...
492s Unpacking r-cran-magrittr (2.0.3-1) ...
492s Selecting previously unselected package r-cran-utf8.
492s Preparing to unpack .../297-r-cran-utf8_1.2.4-1_amd64.deb ...
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492s Selecting previously unselected package r-cran-pillar.
492s Preparing to unpack .../298-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
492s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
492s Selecting previously unselected package r-cran-fansi.
492s Preparing to unpack .../299-r-cran-fansi_1.0.6-2_amd64.deb ...
492s Unpacking r-cran-fansi (1.0.6-2) ...
492s Selecting previously unselected package r-cran-pkgconfig.
492s Preparing to unpack .../300-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
492s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
492s Selecting previously unselected package r-cran-tibble.
492s Preparing to unpack .../301-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
492s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
492s Selecting previously unselected package r-cran-tidyselect.
492s Preparing to unpack .../302-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
492s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
492s Selecting previously unselected package r-cran-dplyr.
492s Preparing to unpack .../303-r-cran-dplyr_1.1.4-4_amd64.deb ...
492s Unpacking r-cran-dplyr (1.1.4-4) ...
492s Selecting previously unselected package r-cran-tzdb.
492s Preparing to unpack .../304-r-cran-tzdb_0.5.0-1_amd64.deb ...
492s Unpacking r-cran-tzdb (0.5.0-1) ...
493s Selecting previously unselected package r-cran-clock.
493s Preparing to unpack .../305-r-cran-clock_0.7.2-1_amd64.deb ...
493s Unpacking r-cran-clock (0.7.2-1) ...
493s Selecting previously unselected package r-cran-gower.
493s Preparing to unpack .../306-r-cran-gower_1.0.2-1_amd64.deb ...
493s Unpacking r-cran-gower (1.0.2-1) ...
493s Selecting previously unselected package r-cran-sparsevctrs.
493s Preparing to unpack .../307-r-cran-sparsevctrs_0.2.0-2_amd64.deb ...
493s Unpacking r-cran-sparsevctrs (0.2.0-2) ...
493s Selecting previously unselected package r-cran-hardhat.
493s Preparing to unpack .../308-r-cran-hardhat_1.4.2+dfsg-1_all.deb ...
493s Unpacking r-cran-hardhat (1.4.2+dfsg-1) ...
493s Selecting previously unselected package r-cran-rpart.
493s Preparing to unpack .../309-r-cran-rpart_4.1.24-1build1_amd64.deb ...
493s Unpacking r-cran-rpart (4.1.24-1build1) ...
493s Selecting previously unselected package r-cran-nnet.
493s Preparing to unpack .../310-r-cran-nnet_7.3-20-1_amd64.deb ...
493s Unpacking r-cran-nnet (7.3-20-1) ...
493s Selecting previously unselected package r-cran-shape.
493s Preparing to unpack .../311-r-cran-shape_1.4.6.1-1_all.deb ...
493s Unpacking r-cran-shape (1.4.6.1-1) ...
493s Selecting previously unselected package r-cran-diagram.
493s Preparing to unpack .../312-r-cran-diagram_1.6.5-2_all.deb ...
493s Unpacking r-cran-diagram (1.6.5-2) ...
493s Selecting previously unselected package r-cran-kernsmooth.
493s Preparing to unpack .../313-r-cran-kernsmooth_2.23-26-1build1_amd64.deb ...
493s Unpacking r-cran-kernsmooth (2.23-26-1build1) ...
493s Selecting previously unselected package r-cran-globals.
493s Preparing to unpack .../314-r-cran-globals_0.19.0-1_all.deb ...
493s Unpacking r-cran-globals (0.19.0-1) ...
493s Selecting previously unselected package r-cran-listenv.
493s Preparing to unpack .../315-r-cran-listenv_0.10.0+dfsg-1_all.deb ...
493s Unpacking r-cran-listenv (0.10.0+dfsg-1) ...
493s Selecting previously unselected package r-cran-parallelly.
493s Preparing to unpack .../316-r-cran-parallelly_1.42.0-1_amd64.deb ...
493s Unpacking r-cran-parallelly (1.42.0-1) ...
493s Selecting previously unselected package r-cran-future.
493s Preparing to unpack .../317-r-cran-future_1.34.0+dfsg-1_all.deb ...
493s Unpacking r-cran-future (1.34.0+dfsg-1) ...
493s Selecting previously unselected package r-cran-future.apply.
493s Preparing to unpack .../318-r-cran-future.apply_1.11.3+dfsg-1_all.deb ...
493s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ...
493s Selecting previously unselected package r-cran-numderiv.
493s Preparing to unpack .../319-r-cran-numderiv_2016.8-1.1-3build1_all.deb ...
493s Unpacking r-cran-numderiv (2016.8-1.1-3build1) ...
493s Selecting previously unselected package r-cran-progressr.
493s Preparing to unpack .../320-r-cran-progressr_0.15.1-1_all.deb ...
493s Unpacking r-cran-progressr (0.15.1-1) ...
493s Selecting previously unselected package r-cran-squarem.
493s Preparing to unpack .../321-r-cran-squarem_2021.1-1build1_all.deb ...
493s Unpacking r-cran-squarem (2021.1-1build1) ...
493s Selecting previously unselected package r-cran-lava.
493s Preparing to unpack .../322-r-cran-lava_1.8.2+dfsg-1_all.deb ...
493s Unpacking r-cran-lava (1.8.2+dfsg-1) ...
493s Selecting previously unselected package r-cran-prodlim.
493s Preparing to unpack .../323-r-cran-prodlim_2024.06.25-1_amd64.deb ...
493s Unpacking r-cran-prodlim (2024.06.25-1) ...
493s Selecting previously unselected package r-cran-ipred.
493s Preparing to unpack .../324-r-cran-ipred_0.9-15-1_amd64.deb ...
493s Unpacking r-cran-ipred (0.9-15-1) ...
493s Selecting previously unselected package r-cran-timechange.
493s Preparing to unpack .../325-r-cran-timechange_0.3.0-2_amd64.deb ...
493s Unpacking r-cran-timechange (0.3.0-2) ...
493s Selecting previously unselected package r-cran-lubridate.
493s Preparing to unpack .../326-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ...
493s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ...
493s Selecting previously unselected package r-cran-purrr.
493s Preparing to unpack .../327-r-cran-purrr_1.0.4-1_amd64.deb ...
493s Unpacking r-cran-purrr (1.0.4-1) ...
493s Selecting previously unselected package r-cran-stringi.
493s Preparing to unpack .../328-r-cran-stringi_1.8.4-1build2_amd64.deb ...
493s Unpacking r-cran-stringi (1.8.4-1build2) ...
493s Selecting previously unselected package r-cran-stringr.
493s Preparing to unpack .../329-r-cran-stringr_1.5.1-1_all.deb ...
493s Unpacking r-cran-stringr (1.5.1-1) ...
493s Selecting previously unselected package r-cran-tidyr.
493s Preparing to unpack .../330-r-cran-tidyr_1.3.1-1_amd64.deb ...
493s Unpacking r-cran-tidyr (1.3.1-1) ...
493s Selecting previously unselected package r-cran-timedate.
493s Preparing to unpack .../331-r-cran-timedate_4052.112-1_amd64.deb ...
493s Unpacking r-cran-timedate (4052.112-1) ...
493s Selecting previously unselected package r-cran-recipes.
493s Preparing to unpack .../332-r-cran-recipes_1.1.0+dfsg-1_all.deb ...
493s Unpacking r-cran-recipes (1.1.0+dfsg-1) ...
493s Selecting previously unselected package r-cran-reshape2.
493s Preparing to unpack .../333-r-cran-reshape2_1.4.4-2build2_amd64.deb ...
493s Unpacking r-cran-reshape2 (1.4.4-2build2) ...
493s Selecting previously unselected package r-cran-caret.
493s Preparing to unpack .../334-r-cran-caret_7.0-1+dfsg-1_amd64.deb ...
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493s Selecting previously unselected package r-cran-catools.
493s Preparing to unpack .../335-r-cran-catools_1.18.3-1_amd64.deb ...
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493s Selecting previously unselected package r-cran-classint.
493s Preparing to unpack .../336-r-cran-classint_0.4-11+dfsg-1_amd64.deb ...
493s Unpacking r-cran-classint (0.4-11+dfsg-1) ...
493s Selecting previously unselected package r-cran-cluster.
493s Preparing to unpack .../337-r-cran-cluster_2.1.8.2-1_amd64.deb ...
493s Unpacking r-cran-cluster (2.1.8.2-1) ...
493s Selecting previously unselected package r-cran-evaluate.
493s Preparing to unpack .../338-r-cran-evaluate_1.0.5-1_all.deb ...
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493s Selecting previously unselected package r-cran-xfun.
493s Preparing to unpack .../339-r-cran-xfun_0.55+dfsg-1_amd64.deb ...
493s Unpacking r-cran-xfun (0.55+dfsg-1) ...
493s Selecting previously unselected package r-cran-highr.
493s Preparing to unpack .../340-r-cran-highr_0.11+dfsg-1_all.deb ...
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493s Selecting previously unselected package libjs-mathjax.
493s Preparing to unpack .../341-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ...
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493s Selecting previously unselected package r-cran-knitr.
493s Preparing to unpack .../342-r-cran-knitr_1.51+dfsg-1_all.deb ...
493s Unpacking r-cran-knitr (1.51+dfsg-1) ...
493s Selecting previously unselected package r-cran-fontawesome.
493s Preparing to unpack .../343-r-cran-fontawesome_0.5.3-1_all.deb ...
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494s Selecting previously unselected package r-cran-tinytex.
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494s Selecting previously unselected package libjs-modernizr.
494s Preparing to unpack .../345-libjs-modernizr_3.13.0-0.1build1_all.deb ...
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494s Selecting previously unselected package r-cran-later.
494s Preparing to unpack .../346-r-cran-later_1.4.1+dfsg-1_amd64.deb ...
494s Unpacking r-cran-later (1.4.1+dfsg-1) ...
494s Selecting previously unselected package r-cran-promises.
494s Preparing to unpack .../347-r-cran-promises_1.3.2+dfsg-1_amd64.deb ...
494s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
494s Selecting previously unselected package r-cran-httpuv.
494s Preparing to unpack .../348-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ...
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494s Selecting previously unselected package r-cran-xtable.
494s Preparing to unpack .../349-r-cran-xtable_1%3a1.8-4-2build1_all.deb ...
494s Unpacking r-cran-xtable (1:1.8-4-2build1) ...
494s Selecting previously unselected package r-cran-sourcetools.
494s Preparing to unpack .../350-r-cran-sourcetools_0.1.7-1-1_amd64.deb ...
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494s Selecting previously unselected package r-cran-commonmark.
494s Preparing to unpack .../351-r-cran-commonmark_1.9.5-1_amd64.deb ...
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494s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
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494s Selecting previously unselected package r-cran-shiny.
494s Preparing to unpack .../353-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
494s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
494s Selecting previously unselected package r-cran-rmarkdown.
494s Preparing to unpack .../354-r-cran-rmarkdown_2.30+dfsg-1_all.deb ...
494s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ...
494s Selecting previously unselected package r-cran-htmlwidgets.
494s Preparing to unpack .../355-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ...
494s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ...
494s Selecting previously unselected package r-cran-miniui.
494s Preparing to unpack .../356-r-cran-miniui_0.1.2-1_all.deb ...
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494s Selecting previously unselected package r-cran-shinyjs.
494s Preparing to unpack .../357-r-cran-shinyjs_2.1.0-1build1_all.deb ...
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494s Selecting previously unselected package r-cran-colourpicker.
494s Preparing to unpack .../358-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ...
494s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ...
494s Selecting previously unselected package r-cran-conquer.
494s Preparing to unpack .../359-r-cran-conquer_1.3.3-1_amd64.deb ...
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494s Selecting previously unselected package r-cran-cowplot.
494s Preparing to unpack .../360-r-cran-cowplot_1.1.3+dfsg-1_all.deb ...
494s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ...
494s Selecting previously unselected package r-cran-lazyeval.
494s Preparing to unpack .../361-r-cran-lazyeval_0.2.2-1build2_amd64.deb ...
494s Unpacking r-cran-lazyeval (0.2.2-1build2) ...
494s Selecting previously unselected package r-cran-crosstalk.
494s Preparing to unpack .../362-r-cran-crosstalk_1.2.2+dfsg-1_all.deb ...
494s Unpacking r-cran-crosstalk (1.2.2+dfsg-1) ...
494s Selecting previously unselected package r-cran-dbi.
494s Preparing to unpack .../363-r-cran-dbi_1.2.3-1build1_all.deb ...
494s Unpacking r-cran-dbi (1.2.3-1build1) ...
494s Selecting previously unselected package r-cran-deldir.
494s Preparing to unpack .../364-r-cran-deldir_2.0-4-1build1_amd64.deb ...
494s Unpacking r-cran-deldir (2.0-4-1build1) ...
494s Selecting previously unselected package r-cran-deoptimr.
494s Preparing to unpack .../365-r-cran-deoptimr_1.1-4-1_all.deb ...
494s Unpacking r-cran-deoptimr (1.1-4-1) ...
494s Selecting previously unselected package r-cran-desc.
494s Preparing to unpack .../366-r-cran-desc_1.4.3-1_all.deb ...
494s Unpacking r-cran-desc (1.4.3-1) ...
494s Selecting previously unselected package r-cran-diffobj.
494s Preparing to unpack .../367-r-cran-diffobj_0.3.5-1build1_amd64.deb ...
494s Unpacking r-cran-diffobj (0.3.5-1build1) ...
494s Selecting previously unselected package r-cran-dotcall64.
494s Preparing to unpack .../368-r-cran-dotcall64_1.2-1_amd64.deb ...
494s Unpacking r-cran-dotcall64 (1.2-1) ...
494s Selecting previously unselected package r-cran-sitmo.
494s Preparing to unpack .../369-r-cran-sitmo_2.0.2-1build1_amd64.deb ...
494s Unpacking r-cran-sitmo (2.0.2-1build1) ...
494s Selecting previously unselected package r-cran-dqrng.
494s Preparing to unpack .../370-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ...
494s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ...
494s Selecting previously unselected package r-cran-fastdummies.
494s Preparing to unpack .../371-r-cran-fastdummies_1.7.5-1_all.deb ...
494s Unpacking r-cran-fastdummies (1.7.5-1) ...
494s Selecting previously unselected package r-cran-fitdistrplus.
494s Preparing to unpack .../372-r-cran-fitdistrplus_1.2-6-1_all.deb ...
494s Unpacking r-cran-fitdistrplus (1.2-6-1) ...
494s Selecting previously unselected package r-cran-fnn.
494s Preparing to unpack .../373-r-cran-fnn_1.1.4.1-1_amd64.deb ...
494s Unpacking r-cran-fnn (1.1.4.1-1) ...
494s Selecting previously unselected package r-cran-gtools.
494s Preparing to unpack .../374-r-cran-gtools_3.9.5-1build1_amd64.deb ...
494s Unpacking r-cran-gtools (3.9.5-1build1) ...
494s Selecting previously unselected package r-cran-gdata.
494s Preparing to unpack .../375-r-cran-gdata_3.0.1-1build1_all.deb ...
494s Unpacking r-cran-gdata (3.0.1-1build1) ...
494s Selecting previously unselected package r-cran-ggrepel.
494s Preparing to unpack .../376-r-cran-ggrepel_0.9.6-1_amd64.deb ...
494s Unpacking r-cran-ggrepel (0.9.6-1) ...
494s Selecting previously unselected package r-cran-ggridges.
494s Preparing to unpack .../377-r-cran-ggridges_0.5.7-1_all.deb ...
494s Unpacking r-cran-ggridges (0.5.7-1) ...
494s Selecting previously unselected package r-cran-goftest.
494s Preparing to unpack .../378-r-cran-goftest_1.2-3-1build1_amd64.deb ...
494s Unpacking r-cran-goftest (1.2-3-1build1) ...
494s Selecting previously unselected package r-cran-gplots.
494s Preparing to unpack .../379-r-cran-gplots_3.3.0-1_all.deb ...
494s Unpacking r-cran-gplots (3.3.0-1) ...
494s Selecting previously unselected package r-cran-gridextra.
494s Preparing to unpack .../380-r-cran-gridextra_2.3-3build2_all.deb ...
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495s Selecting previously unselected package r-cran-rprojroot.
495s Preparing to unpack .../381-r-cran-rprojroot_2.1.1-1_all.deb ...
495s Unpacking r-cran-rprojroot (2.1.1-1) ...
495s Selecting previously unselected package r-cran-here.
495s Preparing to unpack .../382-r-cran-here_1.0.2-1_all.deb ...
495s Unpacking r-cran-here (1.0.2-1) ...
495s Selecting previously unselected package r-cran-ica.
495s Preparing to unpack .../383-r-cran-ica_1.0-3-1_all.deb ...
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495s Selecting previously unselected package r-cran-igraph.
495s Preparing to unpack .../384-r-cran-igraph_2.1.4-1build1_amd64.deb ...
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495s Selecting previously unselected package r-cran-irlba.
495s Preparing to unpack .../385-r-cran-irlba_2.3.5.1-4_amd64.deb ...
495s Unpacking r-cran-irlba (2.3.5.1-4) ...
495s Selecting previously unselected package r-cran-kernlab.
495s Preparing to unpack .../386-r-cran-kernlab_0.9-33-1_amd64.deb ...
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495s Selecting previously unselected package r-cran-leidenbase.
495s Preparing to unpack .../387-r-cran-leidenbase_0.1.32-1_amd64.deb ...
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495s Selecting previously unselected package r-cran-zoo.
495s Preparing to unpack .../388-r-cran-zoo_1.8-15-1_amd64.deb ...
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495s Selecting previously unselected package r-cran-lmtest.
495s Preparing to unpack .../389-r-cran-lmtest_0.9.40-1build1_amd64.deb ...
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495s Selecting previously unselected package r-cran-mathjaxr.
495s Preparing to unpack .../390-r-cran-mathjaxr_2.0-0-1_all.deb ...
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495s Selecting previously unselected package r-cran-matrixmodels.
495s Preparing to unpack .../391-r-cran-matrixmodels_0.5-4-1_all.deb ...
495s Unpacking r-cran-matrixmodels (0.5-4-1) ...
495s Selecting previously unselected package r-cran-rbibutils.
495s Preparing to unpack .../392-r-cran-rbibutils_2.3-1_amd64.deb ...
495s Unpacking r-cran-rbibutils (2.3-1) ...
495s Selecting previously unselected package r-cran-rdpack.
495s Preparing to unpack .../393-r-cran-rdpack_2.6.3-1_all.deb ...
495s Unpacking r-cran-rdpack (2.6.3-1) ...
495s Selecting previously unselected package r-cran-mnormt.
495s Preparing to unpack .../394-r-cran-mnormt_2.1.2-1_amd64.deb ...
495s Unpacking r-cran-mnormt (2.1.2-1) ...
495s Selecting previously unselected package r-cran-sparsem.
495s Preparing to unpack .../395-r-cran-sparsem_1.84-2-1_amd64.deb ...
495s Unpacking r-cran-sparsem (1.84-2-1) ...
495s Selecting previously unselected package r-cran-quantreg.
495s Preparing to unpack .../396-r-cran-quantreg_6.1-1_amd64.deb ...
495s Unpacking r-cran-quantreg (6.1-1) ...
495s Selecting previously unselected package r-cran-sn.
495s Preparing to unpack .../397-r-cran-sn_2.1.2-1_all.deb ...
495s Unpacking r-cran-sn (2.1.2-1) ...
495s Selecting previously unselected package r-cran-mvtnorm.
495s Preparing to unpack .../398-r-cran-mvtnorm_1.3-3-1build1_amd64.deb ...
495s Unpacking r-cran-mvtnorm (1.3-3-1build1) ...
495s Selecting previously unselected package r-cran-tfisher.
495s Preparing to unpack .../399-r-cran-tfisher_0.2.0-3build1_all.deb ...
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495s Selecting previously unselected package r-cran-plotrix.
495s Preparing to unpack .../400-r-cran-plotrix_3.8-13-1_all.deb ...
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495s Selecting previously unselected package r-cran-th.data.
495s Preparing to unpack .../401-r-cran-th.data_1.1-5-1_all.deb ...
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495s Selecting previously unselected package r-cran-sandwich.
495s Preparing to unpack .../402-r-cran-sandwich_3.1-1-1build1_all.deb ...
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495s Selecting previously unselected package r-cran-multcomp.
495s Preparing to unpack .../403-r-cran-multcomp_1.4-29-1_all.deb ...
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495s Selecting previously unselected package r-cran-mutoss.
495s Preparing to unpack .../404-r-cran-mutoss_0.1-14-1_all.deb ...
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495s Selecting previously unselected package r-cran-robustbase.
495s Preparing to unpack .../405-r-cran-robustbase_0.99-7-1_amd64.deb ...
495s Unpacking r-cran-robustbase (0.99-7-1) ...
495s Selecting previously unselected package r-cran-qqconf.
495s Preparing to unpack .../406-r-cran-qqconf_1.3.2+dfsg-1_amd64.deb ...
495s Unpacking r-cran-qqconf (1.3.2+dfsg-1) ...
495s Selecting previously unselected package r-cran-metap.
495s Preparing to unpack .../407-r-cran-metap_1.13-1_all.deb ...
495s Unpacking r-cran-metap (1.13-1) ...
495s Selecting previously unselected package r-cran-plotly.
495s Preparing to unpack .../408-r-cran-plotly_4.10.4+dfsg-4_all.deb ...
495s Unpacking r-cran-plotly (4.10.4+dfsg-4) ...
495s Selecting previously unselected package r-cran-segmented.
495s Preparing to unpack .../409-r-cran-segmented_2.1-4-1_all.deb ...
495s Unpacking r-cran-segmented (2.1-4-1) ...
495s Selecting previously unselected package r-cran-mixtools.
495s Preparing to unpack .../410-r-cran-mixtools_2.0.0.1-1_amd64.deb ...
495s Unpacking r-cran-mixtools (2.0.0.1-1) ...
495s Selecting previously unselected package r-cran-patchwork.
495s Preparing to unpack .../411-r-cran-patchwork_1.3.0-1_all.deb ...
495s Unpacking r-cran-patchwork (1.3.0-1) ...
495s Selecting previously unselected package r-cran-pbapply.
495s Preparing to unpack .../412-r-cran-pbapply_1.7-2-1_all.deb ...
495s Unpacking r-cran-pbapply (1.7-2-1) ...
495s Selecting previously unselected package r-cran-pkgbuild.
496s Preparing to unpack .../413-r-cran-pkgbuild_1.4.8-1_all.deb ...
496s Unpacking r-cran-pkgbuild (1.4.8-1) ...
496s Selecting previously unselected package r-cran-pkgload.
496s Preparing to unpack .../414-r-cran-pkgload_1.4.1-1_all.deb ...
496s Unpacking r-cran-pkgload (1.4.1-1) ...
496s Selecting previously unselected package r-cran-png.
496s Preparing to unpack .../415-r-cran-png_0.1-8-1build2_amd64.deb ...
496s Unpacking r-cran-png (0.1-8-1build2) ...
496s Selecting previously unselected package r-cran-polyclip.
496s Preparing to unpack .../416-r-cran-polyclip_1.10-7-1_amd64.deb ...
496s Unpacking r-cran-polyclip (1.10-7-1) ...
496s Selecting previously unselected package r-cran-praise.
496s Preparing to unpack .../417-r-cran-praise_1.0.0-4build2_all.deb ...
496s Unpacking r-cran-praise (1.0.0-4build2) ...
496s Selecting previously unselected package r-cran-r.methodss3.
496s Preparing to unpack .../418-r-cran-r.methodss3_1.8.2-1_all.deb ...
496s Unpacking r-cran-r.methodss3 (1.8.2-1) ...
496s Selecting previously unselected package r-cran-r.oo.
496s Preparing to unpack .../419-r-cran-r.oo_1.27.1-1_all.deb ...
496s Unpacking r-cran-r.oo (1.27.1-1) ...
496s Selecting previously unselected package r-cran-r.utils.
496s Preparing to unpack .../420-r-cran-r.utils_2.13.0-1_all.deb ...
496s Unpacking r-cran-r.utils (2.13.0-1) ...
496s Selecting previously unselected package r-cran-rann.
496s Preparing to unpack .../421-r-cran-rann_2.6.2-1_amd64.deb ...
496s Unpacking r-cran-rann (2.6.2-1) ...
496s Selecting previously unselected package r-cran-rcppannoy.
496s Preparing to unpack .../422-r-cran-rcppannoy_0.0.22-1_amd64.deb ...
496s Unpacking r-cran-rcppannoy (0.0.22-1) ...
496s Selecting previously unselected package r-cran-rcppeigen.
496s Preparing to unpack .../423-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ...
496s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ...
496s Selecting previously unselected package r-cran-rcpphnsw.
496s Preparing to unpack .../424-r-cran-rcpphnsw_0.6.0+ds-1_amd64.deb ...
496s Unpacking r-cran-rcpphnsw (0.6.0+ds-1) ...
496s Selecting previously unselected package r-cran-rcppprogress.
496s Preparing to unpack .../425-r-cran-rcppprogress_0.4.2-2build2_all.deb ...
496s Unpacking r-cran-rcppprogress (0.4.2-2build2) ...
496s Selecting previously unselected package r-cran-rcpptoml.
496s Preparing to unpack .../426-r-cran-rcpptoml_0.2.3+dfsg-1_amd64.deb ...
496s Unpacking r-cran-rcpptoml (0.2.3+dfsg-1) ...
496s Selecting previously unselected package r-cran-reticulate.
496s Preparing to unpack .../427-r-cran-reticulate_1.41.0.1+dfsg-1_amd64.deb ...
496s Unpacking r-cran-reticulate (1.41.0.1+dfsg-1) ...
496s Selecting previously unselected package r-cran-rocr.
496s Preparing to unpack .../428-r-cran-rocr_1.0-12-1_all.deb ...
496s Unpacking r-cran-rocr (1.0-12-1) ...
496s Selecting previously unselected package r-cran-rspectra.
496s Preparing to unpack .../429-r-cran-rspectra_0.16-2-1_amd64.deb ...
496s Unpacking r-cran-rspectra (0.16-2-1) ...
496s Selecting previously unselected package r-cran-rsvd.
496s Preparing to unpack .../430-r-cran-rsvd_1.0.5-1build1_all.deb ...
496s Unpacking r-cran-rsvd (1.0.5-1build1) ...
496s Selecting previously unselected package r-cran-rtsne.
496s Preparing to unpack .../431-r-cran-rtsne_0.17-1_amd64.deb ...
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500s Setting up r-cran-xfun (0.55+dfsg-1) ...
500s Setting up r-cran-vgam (1.1-13-1) ...
500s Setting up r-cran-rcpphnsw (0.6.0+ds-1) ...
500s Setting up r-cran-sys (3.4.3-1) ...
500s Setting up r-cran-deoptimr (1.1-4-1) ...
500s Setting up r-cran-withr (3.0.2+dfsg-1) ...
500s Setting up r-cran-mathjaxr (2.0-0-1) ...
500s Setting up r-cran-processx (3.8.6-1) ...
500s Setting up r-cran-mime (0.12-2) ...
500s Setting up r-cran-praise (1.0.0-4build2) ...
500s Setting up r-cran-generics (0.1.4-1) ...
500s Setting up r-cran-base64enc (0.1-3-3build1) ...
500s Setting up r-cran-iterators (1.0.14-1build1) ...
500s Setting up r-cran-abind (1.4-8-1build1) ...
500s Setting up r-cran-s2 (1.1.9-1build1) ...
500s Setting up r-cran-digest (0.6.39-1) ...
500s Setting up r-cran-ape (5.8-1-1) ...
500s Setting up r-cran-yaml (2.3.10-1) ...
500s Setting up r-cran-ica (1.0-3-1) ...
500s Setting up r-cran-lambda.r (1.2.4-2build2) ...
500s Setting up r-cran-rann (2.6.2-1) ...
500s Setting up r-cran-gower (1.0.2-1) ...
500s Setting up r-cran-evaluate (1.0.5-1) ...
500s Setting up r-cran-dbi (1.2.3-1build1) ...
500s Setting up r-cran-timedate (4052.112-1) ...
500s Setting up r-cran-highr (0.11+dfsg-1) ...
500s Setting up r-cran-foreach (1.5.2-1build1) ...
500s Setting up r-cran-fansi (1.0.6-2) ...
500s Setting up r-cran-mass (7.3-65-1) ...
500s Setting up r-cran-snow (1:0.4.4-2build1) ...
500s Setting up r-cran-gtools (3.9.5-1build1) ...
500s Setting up r-cran-kernlab (0.9-33-1) ...
500s Setting up r-cran-data.table (1.17.0+dfsg-1) ...
500s Setting up r-cran-glue (1.8.0-1) ...
500s Setting up r-cran-xtable (1:1.8-4-2build1) ...
500s Setting up r-cran-polyclip (1.10-7-1) ...
500s Setting up r-cran-cli (3.6.4-1) ...
500s Setting up gfortran (4:15.2.0-4ubuntu1) ...
500s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
500s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
500s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
500s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
500s Setting up r-cran-rbibutils (2.3-1) ...
500s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ...
500s Setting up r-cran-dotcall64 (1.2-1) ...
500s Setting up r-cran-bitops (1.0-9-1) ...
500s Setting up r-cran-rprojroot (2.1.1-1) ...
500s Setting up r-cran-fnn (1.1.4.1-1) ...
500s Setting up r-cran-progressr (0.15.1-1) ...
500s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ...
500s Setting up r-cran-deldir (2.0-4-1build1) ...
500s Setting up r-cran-goftest (1.2-3-1build1) ...
500s Setting up r-cran-shape (1.4.6.1-1) ...
500s Setting up r-cran-askpass (1.2.1-1) ...
500s Setting up r-cran-fastmap (1.2.0-1) ...
500s Setting up r-cran-png (0.1-8-1build2) ...
500s Setting up r-cran-r.methodss3 (1.8.2-1) ...
500s Setting up r-bioc-biobase (2.66.0-2) ...
500s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
500s Setting up r-cran-mnormt (2.1.2-1) ...
500s Setting up r-cran-pkgconfig (2.0.3-2build2) ...
500s Setting up r-cran-sp (1:2.2-0+dfsg-1) ...
500s Setting up r-cran-utf8 (1.2.4-1) ...
500s Setting up r-cran-parallelly (1.42.0-1) ...
500s Setting up r-cran-stringi (1.8.4-1build2) ...
500s Setting up r-cran-s7 (0.2.0-1) ...
500s Setting up r-cran-plotrix (3.8-13-1) ...
500s Setting up r-cran-cpp11 (0.5.3-1) ...
500s Setting up r-cran-mvtnorm (1.3-3-1build1) ...
500s Setting up r-cran-sitmo (2.0.2-1build1) ...
500s Setting up r-cran-segmented (2.1-4-1) ...
500s Setting up r-cran-plyr (1.8.9-1) ...
500s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ...
500s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ...
500s Setting up r-cran-isoband (0.2.7-1) ...
500s Setting up r-cran-futile.logger (1.4.3-4build2) ...
500s Setting up r-cran-diagram (1.6.5-2) ...
500s Setting up r-cran-waldo (0.6.2-1) ...
500s Setting up r-cran-scales (1.4.0-1) ...
500s Setting up r-bioc-limma (3.62.2+dfsg-1) ...
500s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
500s Setting up r-cran-zoo (1.8-15-1) ...
500s Setting up r-cran-units (0.8-7+dfsg-2) ...
500s Setting up r-cran-later (1.4.1+dfsg-1) ...
500s Setting up r-cran-matrix (1.7-4-1) ...
500s Setting up r-cran-spatstat.sparse (3.1-0-1) ...
500s Setting up r-cran-here (1.0.2-1) ...
500s Setting up r-cran-htmltools (0.5.8.1-1) ...
500s Setting up r-cran-tinytex (0.58-1) ...
500s Setting up r-cran-irlba (2.3.5.1-4) ...
500s Setting up r-cran-kernsmooth (2.23-26-1build1) ...
500s Setting up r-cran-knitr (1.51+dfsg-1) ...
500s Setting up r-cran-rcpptoml (0.2.3+dfsg-1) ...
500s Setting up g++ (4:15.2.0-4ubuntu1) ...
500s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
500s Setting up r-cran-robustbase (0.99-7-1) ...
500s Setting up r-cran-cachem (1.1.0-1) ...
500s Setting up r-cran-lmtest (0.9.40-1build1) ...
500s Setting up r-cran-sass (0.4.9+dfsg-1) ...
500s Setting up build-essential (12.12ubuntu2) ...
500s Setting up r-cran-catools (1.18.3-1) ...
500s Setting up r-cran-rtsne (0.17-1) ...
500s Setting up r-cran-rcpparmadillo (15.2.3-1-1) ...
500s Setting up r-bioc-iranges (2.40.1-3) ...
500s Setting up r-cran-dqrng (0.3.2+dfsg-1) ...
500s Setting up r-cran-tzdb (0.5.0-1) ...
500s Setting up r-cran-reticulate (1.41.0.1+dfsg-1) ...
500s Setting up r-cran-globals (0.19.0-1) ...
500s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ...
500s Setting up r-cran-spam (2.11-1-1) ...
500s Setting up r-cran-restfulr (0.0.15-1) ...
500s Setting up r-cran-gdata (3.0.1-1build1) ...
500s Setting up r-cran-vctrs (0.6.5-1) ...
500s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
500s Setting up r-cran-pillar (1.11.1+dfsg-1) ...
500s Setting up r-cran-rcppannoy (0.0.22-1) ...
500s Setting up r-cran-openssl (2.3.2+dfsg-1) ...
500s Setting up r-base-dev (4.5.2-1ubuntu2) ...
500s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ...
500s Setting up r-cran-stringr (1.5.1-1) ...
500s Setting up r-cran-class (7.3-23-1) ...
500s Setting up r-bioc-biocparallel (1.40.0-2) ...
500s Setting up r-cran-modelmetrics (1.2.2.2-1build2) ...
500s Setting up r-cran-callr (3.7.6-1) ...
500s Setting up r-cran-matrixmodels (0.5-4-1) ...
500s Setting up r-cran-ggplot2 (4.0.2+dfsg-1) ...
500s Setting up r-cran-scattermore (1.2-1) ...
500s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ...
500s Setting up r-cran-desc (1.4.3-1) ...
500s Setting up r-cran-sparsevctrs (0.2.0-2) ...
500s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
500s Setting up r-cran-clock (0.7.2-1) ...
500s Setting up r-cran-sandwich (3.1-1-1build1) ...
500s Setting up r-cran-proc (1.18.5-1) ...
500s Setting up r-cran-fontawesome (0.5.3-1) ...
500s Setting up r-cran-survival (3.8-6-1) ...
500s Setting up r-cran-igraph (2.1.4-1build1) ...
500s Setting up r-bioc-biocio (1.16.0+dfsg-2) ...
500s Setting up r-cran-r.oo (1.27.1-1) ...
500s Setting up r-cran-rdpack (2.6.3-1) ...
500s Setting up r-cran-future (1.34.0+dfsg-1) ...
500s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ...
500s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
500s Setting up r-cran-leidenbase (0.1.32-1) ...
500s Setting up r-cran-reshape2 (1.4.4-2build2) ...
500s Setting up r-cran-rsvd (1.0.5-1build1) ...
500s Setting up r-cran-future.apply (1.11.3+dfsg-1) ...
500s Setting up r-cran-timechange (0.3.0-2) ...
500s Setting up r-cran-th.data (1.1-5-1) ...
500s Setting up r-cran-httr (1.4.7+dfsg-1) ...
500s Setting up r-cran-gridextra (2.3-3build2) ...
500s Setting up r-cran-memoise (2.0.1-1build1) ...
500s Setting up r-cran-lava (1.8.2+dfsg-1) ...
500s Setting up r-cran-promises (1.3.2+dfsg-1) ...
500s Setting up r-cran-purrr (1.0.4-1) ...
500s Setting up r-cran-e1071 (1.7-17-1) ...
500s Setting up r-cran-ggrepel (0.9.6-1) ...
500s Setting up r-cran-spatstat.data (3.1-6-1) ...
500s Setting up r-cran-fastdummies (1.7.5-1) ...
500s Setting up r-cran-multcomp (1.4-29-1) ...
500s Setting up r-cran-qqconf (1.3.2+dfsg-1) ...
500s Setting up pkg-r-autopkgtest (20250812) ...
500s Setting up r-cran-seuratobject (5.0.2-1) ...
500s Setting up r-cran-spatstat.geom (3.3-6-1) ...
500s Setting up r-bioc-xvector (0.46.0-2) ...
500s Setting up r-cran-pkgbuild (1.4.8-1) ...
500s Setting up r-cran-hardhat (1.4.2+dfsg-1) ...
500s Setting up r-cran-dplyr (1.1.4-4) ...
500s Setting up r-cran-rspectra (0.16-2-1) ...
500s Setting up r-cran-gplots (3.3.0-1) ...
500s Setting up r-cran-ggridges (0.5.7-1) ...
500s Setting up r-cran-uwot (0.2.3-1) ...
500s Setting up r-bioc-multtest (2.62.0-2) ...
500s Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
500s Setting up r-cran-sctransform (0.4.1-1) ...
500s Setting up r-cran-lubridate (1.9.4+dfsg-1) ...
500s Setting up r-cran-pkgload (1.4.1-1) ...
500s Setting up r-cran-r.utils (2.13.0-1) ...
500s Setting up r-cran-patchwork (1.3.0-1) ...
500s Setting up r-cran-rocr (1.0-12-1) ...
500s Setting up r-cran-prodlim (2024.06.25-1) ...
500s Setting up r-cran-fitdistrplus (1.2-6-1) ...
500s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ...
500s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ...
500s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
500s Setting up r-cran-rpart (4.1.24-1build1) ...
500s Setting up r-cran-spatstat.random (3.3-3-1) ...
500s Setting up r-cran-ipred (0.9-15-1) ...
500s Setting up r-cran-testthat (3.2.3-1) ...
500s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
500s Setting up r-cran-classint (0.4-11+dfsg-1) ...
500s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
500s Setting up r-cran-spatstat.explore (3.3-4-1) ...
500s Setting up r-cran-tidyr (1.3.1-1) ...
500s Setting up r-cran-recipes (1.1.0+dfsg-1) ...
500s Setting up r-cran-mutoss (0.1-14-1) ...
500s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ...
500s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ...
500s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ...
500s Setting up r-cran-caret (7.0-1+dfsg-1) ...
500s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
500s Setting up r-cran-shinyjs (2.1.0-1build1) ...
500s Setting up r-cran-miniui (0.1.2-1) ...
500s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
500s Setting up r-cran-conquer (1.3.3-1) ...
500s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ...
500s Setting up r-cran-crosstalk (1.2.2+dfsg-1) ...
500s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
500s Setting up r-cran-quantreg (6.1-1) ...
500s Setting up r-cran-sn (2.1.2-1) ...
500s Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ...
500s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
500s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ...
500s Setting up r-cran-tfisher (0.2.0-3build1) ...
500s Setting up r-bioc-genomicalignments (1.42.0-2) ...
500s Setting up r-cran-metap (1.13-1) ...
500s Setting up r-bioc-rtracklayer (1.66.0-3) ...
500s Setting up r-cran-plotly (4.10.4+dfsg-4) ...
500s Setting up r-cran-mixtools (2.0.0.1-1) ...
500s Setting up r-cran-seurat (5.2.1-5) ...
500s Setting up libheif1:amd64 (1.21.2-1) ...
500s Setting up libheif-plugin-aomdec:amd64 (1.21.2-1) ...
500s Setting up libheif-plugin-libde265:amd64 (1.21.2-1) ...
500s Setting up libgdal38:amd64 (3.12.1+dfsg-1) ...
500s Setting up r-cran-sf (1.0-19+dfsg-2build2) ...
500s Processing triggers for install-info (7.2-5) ...
500s Processing triggers for libc-bin (2.42-2ubuntu4) ...
500s Processing triggers for man-db (2.13.1-1build1) ...
503s autopkgtest [05:59:15]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
503s autopkgtest [05:59:15]: test pkg-r-autopkgtest: [-----------------------
503s Test: Try to load the R library Seurat
503s 
503s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
503s Copyright (C) 2025 The R Foundation for Statistical Computing
503s Platform: x86_64-pc-linux-gnu
503s 
503s R is free software and comes with ABSOLUTELY NO WARRANTY.
503s You are welcome to redistribute it under certain conditions.
503s Type 'license()' or 'licence()' for distribution details.
503s 
503s R is a collaborative project with many contributors.
503s Type 'contributors()' for more information and
503s 'citation()' on how to cite R or R packages in publications.
503s 
503s Type 'demo()' for some demos, 'help()' for on-line help, or
503s 'help.start()' for an HTML browser interface to help.
503s Type 'q()' to quit R.
503s 
503s > library('Seurat')
503s Loading required package: SeuratObject
503s Loading required package: sp
505s ‘SeuratObject’ was built under R 4.4.1 but the current version is
505s 4.5.2; it is recomended that you reinstall ‘SeuratObject’ as the ABI
505s for R may have changed
505s ‘SeuratObject’ was built with package ‘Matrix’ 1.7.0 but the current
505s version is 1.7.4; it is recomended that you reinstall ‘SeuratObject’ as
505s the ABI for ‘Matrix’ may have changed
505s 
505s Attaching package: ‘SeuratObject’
505s 
505s The following objects are masked from ‘package:base’:
505s 
505s     intersect, t
505s 
506s > 
507s autopkgtest [05:59:19]: test pkg-r-autopkgtest: -----------------------]
507s pkg-r-autopkgtest    PASS
507s autopkgtest [05:59:19]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
507s autopkgtest [05:59:19]: @@@@@@@@@@@@@@@@@@@@ summary
507s run-unit-test        PASS
507s pkg-r-autopkgtest    PASS