0s autopkgtest [03:18:08]: starting date and time: 2026-02-10 03:18:08+0000
  0s autopkgtest [03:18:08]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [03:18:08]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.01a52hdt/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lattice --apt-upgrade r-cran-mi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lattice/0.22-9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-17.secgroup --name adt-resolute-amd64-r-cran-mi-20260210-031808-juju-7f2275-prod-proposed-migration-environment-15-931be70d-9ae9-4c01-b9a9-45ecf6763a53 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  4s Creating nova instance adt-resolute-amd64-r-cran-mi-20260210-031808-juju-7f2275-prod-proposed-migration-environment-15-931be70d-9ae9-4c01-b9a9-45ecf6763a53 from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 73s autopkgtest [03:19:21]: testbed dpkg architecture: amd64
 73s autopkgtest [03:19:21]: testbed apt version: 3.1.14
 73s autopkgtest [03:19:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 73s autopkgtest [03:19:21]: testbed release detected to be: None
 74s autopkgtest [03:19:22]: updating testbed package index (apt update)
 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 74s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 74s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 74s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB]
 74s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [181 kB]
 74s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1735 kB]
 75s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [220 kB]
 75s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [268 kB]
 75s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5980 B]
 75s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B]
 75s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1791 kB]
 75s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [768 kB]
 75s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.6 kB]
 75s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB]
 75s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B]
 75s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 76s Fetched 5189 kB in 1s (5452 kB/s)
 77s Reading package lists...
 77s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 77s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 77s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 77s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 77s Reading package lists...
 77s Reading package lists...
 78s Building dependency tree...
 78s Reading state information...
 78s Calculating upgrade...
 78s The following package was automatically installed and is no longer required:
 78s   libpython3.13
 78s Use 'sudo apt autoremove' to remove it.
 78s The following NEW packages will be installed:
 78s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 78s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 78s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 78s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 78s The following packages will be upgraded:
 78s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 78s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 78s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 78s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 78s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0
 78s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 78s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 78s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 78s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 78s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 78s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 78s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 78s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 78s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 78s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 78s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 78s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 78s Need to get 237 MB of archives.
 78s After this operation, 339 MB of additional disk space will be used.
 78s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 78s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 78s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 78s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 78s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 78s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 78s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 78s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 78s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 78s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 78s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 78s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 78s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 78s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 78s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 78s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 78s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 78s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 78s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 78s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 78s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 78s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 78s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 78s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 78s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 78s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 78s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 78s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 78s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 78s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 78s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 78s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 78s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 78s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 78s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 79s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 79s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 79s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 79s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 79s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 79s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 79s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 79s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 79s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 79s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 79s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 79s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 79s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 79s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 79s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 79s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 79s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 79s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 79s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 79s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 79s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 79s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 79s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 79s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 79s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 79s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 79s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 79s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 79s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 79s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 79s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 79s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 79s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 79s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 79s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 79s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 79s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 79s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 79s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 79s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 79s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 79s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 79s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 79s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 79s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 79s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 79s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 85s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 86s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 86s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 86s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 86s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 86s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 86s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 86s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 86s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 86s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 86s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 86s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 86s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 86s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 86s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 86s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 86s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 86s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 87s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 87s Fetched 237 MB in 9s (27.8 MB/s)
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 87s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 87s Setting up debianutils (5.23.2build1) ...
 87s (Reading database ... 
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 87s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 87s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
 87s Setting up dash (0.5.12-12ubuntu3) ...
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
 87s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
 87s Setting up findutils (4.10.0-3build2) ...
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
 87s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
 87s Setting up sed (4.9-2build3) ...
 87s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 87s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
 87s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
 87s Setting up tar (1.35+dfsg-3.1build2) ...
 87s (Reading database ... 
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 96s Setting up libglib2.0-data (2.87.2-2) ...
 96s Setting up pollinate (4.33-4ubuntu5) ...
106s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
107s Setting up libwrap0:amd64 (7.6.q-36build2) ...
107s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
108s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
108s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
108s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
108s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
108s Setting up patch (2.8-2build1) ...
108s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
108s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
108s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
108s Setting up lsof (4.99.4+dfsg-2build2) ...
108s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
108s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
108s Setting up dracut-install (109-11ubuntu1) ...
108s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
108s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
108s Setting up pnp.ids (0.394-1build1) ...
108s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
108s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
108s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
108s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
108s Setting up mawk (1.3.4.20260129-1) ...
108s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
108s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
108s Setting up linux-image-virtual (6.19.0-3.3) ...
108s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
108s Setting up libbsd0:amd64 (0.12.2-2build2) ...
108s Setting up libdrm-common (2.4.131-1) ...
108s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
108s Setting up dbus-bin (1.16.2-2ubuntu3) ...
108s Setting up libonig5:amd64 (6.9.10-1build1) ...
108s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
108s Setting up ethtool (1:6.15-3build1) ...
108s Setting up python3-referencing (0.36.2-1ubuntu2) ...
108s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
108s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
108s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
108s Setting up tcpdump (4.99.5-2ubuntu3) ...
108s Setting up linux-image-generic (6.19.0-3.3) ...
108s Setting up wget (1.25.0-2ubuntu4) ...
108s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
108s Setting up iptables (1.8.11-2ubuntu3) ...
108s Setting up iproute2 (6.18.0-1ubuntu1) ...
108s Setting up linux-headers-generic (6.19.0-3.3) ...
108s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
108s Setting up hwdata (0.394-1build1) ...
108s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
108s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
108s No schema files found: doing nothing.
108s Setting up dbus (1.16.2-2ubuntu3) ...
108s A reboot is required to replace the running dbus-daemon.
108s Please reboot the system when convenient.
108s Setting up shared-mime-info (2.4-5build3) ...
109s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
109s Setting up pciutils (1:3.14.0-1build2) ...
109s Setting up python3-markdown-it (3.0.0-3build1) ...
109s Setting up libdrm2:amd64 (2.4.131-1) ...
109s Setting up libpython3.14:amd64 (3.14.2-1) ...
109s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
109s Setting up linux-tools-common (6.19.0-3.3) ...
109s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
109s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
109s Setting up apt (3.1.15) ...
110s Setting up linux-headers-virtual (6.19.0-3.3) ...
110s Setting up linux-generic (6.19.0-3.3) ...
110s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
110s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
110s Setting up ubuntu-standard (1.564) ...
110s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
110s Setting up linux-virtual (6.19.0-3.3) ...
110s Setting up linux-perf (6.19.0-3.3) ...
110s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
110s Processing triggers for debianutils (5.23.2build1) ...
110s Processing triggers for install-info (7.2-5) ...
110s Processing triggers for initramfs-tools (0.150ubuntu7) ...
110s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
114s Processing triggers for libc-bin (2.42-2ubuntu4) ...
114s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
114s /etc/kernel/postinst.d/initramfs-tools:
114s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
118s /etc/kernel/postinst.d/zz-update-grub:
118s Sourcing file `/etc/default/grub'
118s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
118s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
118s Generating grub configuration file ...
118s Found linux image: /boot/vmlinuz-6.19.0-3-generic
118s Found initrd image: /boot/initrd.img-6.19.0-3-generic
118s Found linux image: /boot/vmlinuz-6.18.0-9-generic
118s Found initrd image: /boot/initrd.img-6.18.0-9-generic
118s Warning: os-prober will not be executed to detect other bootable partitions.
118s Systems on them will not be added to the GRUB boot configuration.
118s Check GRUB_DISABLE_OS_PROBER documentation entry.
118s Adding boot menu entry for UEFI Firmware Settings ...
118s done
119s autopkgtest [03:20:07]: upgrading testbed (apt dist-upgrade and autopurge)
119s Reading package lists...
119s Building dependency tree...
119s Reading state information...
120s Calculating upgrade...
120s The following package was automatically installed and is no longer required:
120s   libpython3.13
120s Use 'sudo apt autoremove' to remove it.
120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
120s Reading package lists...
120s Building dependency tree...
120s Reading state information...
120s Solving dependencies...
120s The following packages will be REMOVED:
120s   libpython3.13*
120s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
120s After this operation, 7599 kB disk space will be freed.
120s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
120s Removing libpython3.13:amd64 (3.13.11-1) ...
120s Processing triggers for libc-bin (2.42-2ubuntu4) ...
121s autopkgtest [03:20:09]: rebooting testbed after setup commands that affected boot
148s autopkgtest [03:20:36]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
150s autopkgtest [03:20:38]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-mi
151s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-mi 1.2-1 (dsc) [2167 B]
151s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-mi 1.2-1 (tar) [806 kB]
151s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-mi 1.2-1 (diff) [3836 B]
151s gpgv: Signature made Mon Jan 19 01:29:38 2026 UTC
151s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
151s gpgv:                issuer "plessy@debian.org"
151s gpgv: Can't check signature: No public key
151s dpkg-source: warning: cannot verify inline signature for ./r-cran-mi_1.2-1.dsc: no acceptable signature found
151s autopkgtest [03:20:39]: testing package r-cran-mi version 1.2-1
152s autopkgtest [03:20:40]: build not needed
153s autopkgtest [03:20:41]: test run-unit-test: preparing testbed
153s Reading package lists...
153s Building dependency tree...
153s Reading state information...
153s Solving dependencies...
153s The following NEW packages will be installed:
153s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
153s   fonts-glyphicons-halflings fonts-mathjax libblas3 libcairo2 libdatrie1
153s   libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3
153s   libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap
153s   libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-mathjax
153s   liblapack3 liblerc4 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0
153s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6
153s   libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0
153s   libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 node-normalize.css
153s   r-base-core r-cran-abind r-cran-arm r-cran-boot r-cran-caret r-cran-class
153s   r-cran-cli r-cran-clock r-cran-coda r-cran-codetools r-cran-conquer
153s   r-cran-cpp11 r-cran-data.table r-cran-diagram r-cran-digest r-cran-dplyr
153s   r-cran-e1071 r-cran-evaluate r-cran-fansi r-cran-farver r-cran-foreach
153s   r-cran-foreign r-cran-future r-cran-future.apply r-cran-generics
153s   r-cran-ggplot2 r-cran-globals r-cran-glue r-cran-gower r-cran-gtable
153s   r-cran-hardhat r-cran-highr r-cran-ipred r-cran-isoband r-cran-iterators
153s   r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lattice r-cran-lava
153s   r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lme4 r-cran-lubridate
153s   r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixmodels
153s   r-cran-matrixstats r-cran-mgcv r-cran-mi r-cran-minqa r-cran-mnormt
153s   r-cran-modelmetrics r-cran-nlme r-cran-nloptr r-cran-nnet r-cran-numderiv
153s   r-cran-parallelly r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten
153s   r-cran-plyr r-cran-proc r-cran-prodlim r-cran-progressr r-cran-proxy
153s   r-cran-purrr r-cran-quantreg r-cran-r6 r-cran-rbibutils r-cran-rcolorbrewer
153s   r-cran-rcpp r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rdpack
153s   r-cran-recipes r-cran-reformulas r-cran-reshape2 r-cran-rlang r-cran-rpart
153s   r-cran-scales r-cran-shape r-cran-sn r-cran-sparsem r-cran-sparsevctrs
153s   r-cran-squarem r-cran-statmod r-cran-stringi r-cran-stringr r-cran-survival
153s   r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange
153s   r-cran-timedate r-cran-truncnorm r-cran-tzdb r-cran-utf8 r-cran-vctrs
153s   r-cran-viridislite r-cran-withr r-cran-xfun r-cran-yaml unzip x11-common
153s   xdg-utils zip
153s 0 upgraded, 157 newly installed, 0 to remove and 0 not upgraded.
153s Need to get 138 MB of archives.
153s After this operation, 296 MB of additional disk space will be used.
153s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
153s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
154s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
154s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
154s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
154s Get:6 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
154s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
154s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
154s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
154s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
154s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
154s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
154s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
154s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
154s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
154s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
154s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
154s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
154s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
154s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
154s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
154s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
154s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
154s Get:24 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
154s Get:25 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
154s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
154s Get:27 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
154s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
154s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
154s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
154s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
154s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
154s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
154s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
154s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
154s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
154s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
154s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
154s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
154s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
154s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
154s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
154s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
154s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
154s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
154s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
154s Get:47 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
154s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
154s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
154s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
154s Get:51 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
155s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
155s Get:53 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
155s Get:54 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-lattice amd64 0.22-9-1 [1399 kB]
155s Get:55 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
155s Get:56 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-boot all 1.3-32-1 [636 kB]
155s Get:57 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
155s Get:58 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
155s Get:59 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
155s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
155s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-minqa amd64 1.2.8-1 [119 kB]
155s Get:62 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnlopt0 amd64 2.7.1-7ubuntu1 [189 kB]
155s Get:63 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nloptr amd64 2.2.1-2 [251 kB]
155s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
155s Get:65 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB]
155s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reformulas all 0.4.4-1 [151 kB]
156s Get:67 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
156s Get:68 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
156s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB]
156s Get:70 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lme4 amd64 1.1-38-1 [4197 kB]
156s Get:71 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-coda all 0.19-4.1-1 [321 kB]
156s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-arm all 1.14-4-1 [421 kB]
156s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
156s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
156s Get:75 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
156s Get:76 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
156s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
156s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB]
156s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
156s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
156s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
156s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
156s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
156s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
156s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
156s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
156s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
156s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
156s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
156s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
156s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
156s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
156s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
157s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB]
157s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
157s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-e1071 amd64 1.7-17-1 [579 kB]
157s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
157s Get:98 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
157s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
157s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
157s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build2 [155 kB]
157s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
157s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB]
157s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
157s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
157s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
157s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
157s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tzdb amd64 0.5.0-1 [538 kB]
157s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clock amd64 0.7.2-1 [1903 kB]
157s Get:110 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB]
157s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsevctrs amd64 0.2.0-2 [170 kB]
157s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hardhat all 1.4.2+dfsg-1 [596 kB]
157s Get:113 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB]
157s Get:114 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB]
157s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB]
157s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB]
157s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB]
157s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB]
157s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
157s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-globals all 0.19.0-1 [160 kB]
157s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB]
158s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB]
158s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB]
158s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
158s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-numderiv all 2016.8-1.1-3build1 [116 kB]
158s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB]
158s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-squarem all 2021.1-1build1 [180 kB]
158s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lava all 1.8.2+dfsg-1 [2210 kB]
158s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB]
158s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB]
158s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timechange amd64 0.3.0-2 [201 kB]
158s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB]
158s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
158s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
158s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
158s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
158s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timedate amd64 4052.112-1 [1298 kB]
158s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
158s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB]
158s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB]
158s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
158s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB]
158s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB]
158s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
158s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreign amd64 0.8.91-1 [245 kB]
158s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
158s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
158s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
158s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
158s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
158s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixmodels all 0.5-4-1 [351 kB]
159s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mi all 1.2-1 [1859 kB]
159s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mnormt amd64 2.1.2-1 [176 kB]
159s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB]
159s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quantreg amd64 6.1-1 [1455 kB]
159s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sn all 2.1.2-1 [1823 kB]
159s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-truncnorm amd64 1.0-9-2 [25.3 kB]
159s Preconfiguring packages ...
159s Fetched 138 MB in 5s (25.4 MB/s)
159s Selecting previously unselected package fonts-dejavu-mono.
159s (Reading database ... 
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159s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ...
159s Unpacking fonts-dejavu-mono (2.37-8build1) ...
159s Selecting previously unselected package fonts-dejavu-core.
159s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ...
159s Unpacking fonts-dejavu-core (2.37-8build1) ...
159s Selecting previously unselected package fontconfig-config.
159s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
159s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
159s Selecting previously unselected package libfontconfig1:amd64.
159s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
159s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
159s Selecting previously unselected package fontconfig.
159s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
159s Unpacking fontconfig (2.17.1-3ubuntu1) ...
159s Selecting previously unselected package fonts-glyphicons-halflings.
159s Preparing to unpack .../005-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
159s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
159s Selecting previously unselected package fonts-mathjax.
159s Preparing to unpack .../006-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
159s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
159s Selecting previously unselected package libblas3:amd64.
159s Preparing to unpack .../007-libblas3_3.12.1-7ubuntu1_amd64.deb ...
159s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ...
159s Selecting previously unselected package libpixman-1-0:amd64.
159s Preparing to unpack .../008-libpixman-1-0_0.46.4-1_amd64.deb ...
159s Unpacking libpixman-1-0:amd64 (0.46.4-1) ...
159s Selecting previously unselected package libxcb-render0:amd64.
159s Preparing to unpack .../009-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
159s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
160s Selecting previously unselected package libxcb-shm0:amd64.
160s Preparing to unpack .../010-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
160s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
160s Selecting previously unselected package libxrender1:amd64.
160s Preparing to unpack .../011-libxrender1_1%3a0.9.12-1_amd64.deb ...
160s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
160s Selecting previously unselected package libcairo2:amd64.
160s Preparing to unpack .../012-libcairo2_1.18.4-3_amd64.deb ...
160s Unpacking libcairo2:amd64 (1.18.4-3) ...
160s Selecting previously unselected package libdatrie1:amd64.
160s Preparing to unpack .../013-libdatrie1_0.2.14-1_amd64.deb ...
160s Unpacking libdatrie1:amd64 (0.2.14-1) ...
160s Selecting previously unselected package libdeflate0:amd64.
160s Preparing to unpack .../014-libdeflate0_1.23-2build1_amd64.deb ...
160s Unpacking libdeflate0:amd64 (1.23-2build1) ...
160s Selecting previously unselected package libgfortran5:amd64.
160s Preparing to unpack .../015-libgfortran5_16-20260208-1ubuntu1_amd64.deb ...
160s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ...
160s Selecting previously unselected package libgomp1:amd64.
160s Preparing to unpack .../016-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
160s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
160s Selecting previously unselected package libgraphite2-3:amd64.
160s Preparing to unpack .../017-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ...
160s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
160s Selecting previously unselected package libharfbuzz0b:amd64.
160s Preparing to unpack .../018-libharfbuzz0b_12.3.2-1_amd64.deb ...
160s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ...
160s Selecting previously unselected package x11-common.
160s Preparing to unpack .../019-x11-common_1%3a7.7+24ubuntu1_all.deb ...
160s Unpacking x11-common (1:7.7+24ubuntu1) ...
160s Selecting previously unselected package libice6:amd64.
160s Preparing to unpack .../020-libice6_2%3a1.1.1-1build1_amd64.deb ...
160s Unpacking libice6:amd64 (2:1.1.1-1build1) ...
160s Selecting previously unselected package libjpeg-turbo8:amd64.
160s Preparing to unpack .../021-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ...
160s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
160s Selecting previously unselected package libjpeg8:amd64.
160s Preparing to unpack .../022-libjpeg8_8c-2ubuntu12_amd64.deb ...
160s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ...
160s Selecting previously unselected package libjs-bootstrap.
160s Preparing to unpack .../023-libjs-bootstrap_3.4.1+dfsg-6_all.deb ...
160s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ...
160s Selecting previously unselected package libjs-highlight.js.
160s Preparing to unpack .../024-libjs-highlight.js_10.7.3+dfsg-2_all.deb ...
160s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ...
160s Selecting previously unselected package libjs-jquery.
160s Preparing to unpack .../025-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ...
160s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
160s Selecting previously unselected package libjs-jquery-datatables.
160s Preparing to unpack .../026-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ...
160s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
160s Selecting previously unselected package liblapack3:amd64.
160s Preparing to unpack .../027-liblapack3_3.12.1-7ubuntu1_amd64.deb ...
160s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ...
160s Selecting previously unselected package liblerc4:amd64.
160s Preparing to unpack .../028-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ...
160s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
160s Selecting previously unselected package libthai-data.
160s Preparing to unpack .../029-libthai-data_0.1.30-1_all.deb ...
160s Unpacking libthai-data (0.1.30-1) ...
160s Selecting previously unselected package libthai0:amd64.
160s Preparing to unpack .../030-libthai0_0.1.30-1_amd64.deb ...
160s Unpacking libthai0:amd64 (0.1.30-1) ...
160s Selecting previously unselected package libpango-1.0-0:amd64.
160s Preparing to unpack .../031-libpango-1.0-0_1.57.0-1_amd64.deb ...
160s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ...
160s Selecting previously unselected package libpangoft2-1.0-0:amd64.
160s Preparing to unpack .../032-libpangoft2-1.0-0_1.57.0-1_amd64.deb ...
160s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ...
160s Selecting previously unselected package libpangocairo-1.0-0:amd64.
160s Preparing to unpack .../033-libpangocairo-1.0-0_1.57.0-1_amd64.deb ...
160s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ...
160s Selecting previously unselected package libpaper2:amd64.
160s Preparing to unpack .../034-libpaper2_2.2.5-0.3build1_amd64.deb ...
160s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ...
160s Selecting previously unselected package libpaper-utils.
160s Preparing to unpack .../035-libpaper-utils_2.2.5-0.3build1_amd64.deb ...
160s Unpacking libpaper-utils (2.2.5-0.3build1) ...
160s Selecting previously unselected package libsharpyuv0:amd64.
160s Preparing to unpack .../036-libsharpyuv0_1.5.0-0.1build1_amd64.deb ...
160s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ...
160s Selecting previously unselected package libsm6:amd64.
160s Preparing to unpack .../037-libsm6_2%3a1.2.6-1build1_amd64.deb ...
160s Unpacking libsm6:amd64 (2:1.2.6-1build1) ...
160s Selecting previously unselected package libtcl8.6:amd64.
160s Preparing to unpack .../038-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ...
160s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
160s Selecting previously unselected package libjbig0:amd64.
160s Preparing to unpack .../039-libjbig0_2.1-6.1ubuntu3_amd64.deb ...
160s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ...
160s Selecting previously unselected package libwebp7:amd64.
160s Preparing to unpack .../040-libwebp7_1.5.0-0.1build1_amd64.deb ...
160s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ...
160s Selecting previously unselected package libtiff6:amd64.
160s Preparing to unpack .../041-libtiff6_4.7.0-3ubuntu3_amd64.deb ...
160s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ...
160s Selecting previously unselected package libxft2:amd64.
160s Preparing to unpack .../042-libxft2_2.3.6-1build2_amd64.deb ...
160s Unpacking libxft2:amd64 (2.3.6-1build2) ...
160s Selecting previously unselected package libxss1:amd64.
160s Preparing to unpack .../043-libxss1_1%3a1.2.3-1build4_amd64.deb ...
160s Unpacking libxss1:amd64 (1:1.2.3-1build4) ...
160s Selecting previously unselected package libtk8.6:amd64.
160s Preparing to unpack .../044-libtk8.6_8.6.17-1_amd64.deb ...
160s Unpacking libtk8.6:amd64 (8.6.17-1) ...
160s Selecting previously unselected package libxt6t64:amd64.
160s Preparing to unpack .../045-libxt6t64_1%3a1.2.1-1.3_amd64.deb ...
160s Unpacking libxt6t64:amd64 (1:1.2.1-1.3) ...
160s Selecting previously unselected package node-normalize.css.
160s Preparing to unpack .../046-node-normalize.css_8.0.1-5.1_all.deb ...
160s Unpacking node-normalize.css (8.0.1-5.1) ...
160s Selecting previously unselected package zip.
160s Preparing to unpack .../047-zip_3.0-15ubuntu3_amd64.deb ...
160s Unpacking zip (3.0-15ubuntu3) ...
160s Selecting previously unselected package unzip.
160s Preparing to unpack .../048-unzip_6.0-29ubuntu1_amd64.deb ...
160s Unpacking unzip (6.0-29ubuntu1) ...
160s Selecting previously unselected package xdg-utils.
160s Preparing to unpack .../049-xdg-utils_1.2.1-2ubuntu2_all.deb ...
160s Unpacking xdg-utils (1.2.1-2ubuntu2) ...
160s Selecting previously unselected package r-base-core.
160s Preparing to unpack .../050-r-base-core_4.5.2-1ubuntu2_amd64.deb ...
160s Unpacking r-base-core (4.5.2-1ubuntu2) ...
160s Selecting previously unselected package r-cran-abind.
160s Preparing to unpack .../051-r-cran-abind_1.4-8-1build1_all.deb ...
160s Unpacking r-cran-abind (1.4-8-1build1) ...
160s Selecting previously unselected package r-cran-mass.
160s Preparing to unpack .../052-r-cran-mass_7.3-65-1_amd64.deb ...
160s Unpacking r-cran-mass (7.3-65-1) ...
160s Selecting previously unselected package r-cran-lattice.
160s Preparing to unpack .../053-r-cran-lattice_0.22-9-1_amd64.deb ...
160s Unpacking r-cran-lattice (0.22-9-1) ...
160s Selecting previously unselected package r-cran-matrix.
160s Preparing to unpack .../054-r-cran-matrix_1.7-4-1_amd64.deb ...
160s Unpacking r-cran-matrix (1.7-4-1) ...
160s Selecting previously unselected package r-cran-boot.
160s Preparing to unpack .../055-r-cran-boot_1.3-32-1_all.deb ...
160s Unpacking r-cran-boot (1.3-32-1) ...
160s Selecting previously unselected package r-cran-nlme.
160s Preparing to unpack .../056-r-cran-nlme_3.1.168-1_amd64.deb ...
160s Unpacking r-cran-nlme (3.1.168-1) ...
160s Selecting previously unselected package r-cran-littler.
160s Preparing to unpack .../057-r-cran-littler_0.3.22-1_amd64.deb ...
160s Unpacking r-cran-littler (0.3.22-1) ...
160s Selecting previously unselected package r-cran-pkgkitten.
160s Preparing to unpack .../058-r-cran-pkgkitten_0.2.4-1_all.deb ...
160s Unpacking r-cran-pkgkitten (0.2.4-1) ...
160s Selecting previously unselected package r-cran-rcpp.
160s Preparing to unpack .../059-r-cran-rcpp_1.1.0-1_amd64.deb ...
160s Unpacking r-cran-rcpp (1.1.0-1) ...
161s Selecting previously unselected package r-cran-minqa.
161s Preparing to unpack .../060-r-cran-minqa_1.2.8-1_amd64.deb ...
161s Unpacking r-cran-minqa (1.2.8-1) ...
161s Selecting previously unselected package libnlopt0:amd64.
161s Preparing to unpack .../061-libnlopt0_2.7.1-7ubuntu1_amd64.deb ...
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161s Selecting previously unselected package r-cran-nloptr.
161s Preparing to unpack .../062-r-cran-nloptr_2.2.1-2_amd64.deb ...
161s Unpacking r-cran-nloptr (2.2.1-2) ...
161s Selecting previously unselected package r-cran-rbibutils.
161s Preparing to unpack .../063-r-cran-rbibutils_2.3-1_amd64.deb ...
161s Unpacking r-cran-rbibutils (2.3-1) ...
161s Selecting previously unselected package r-cran-rdpack.
161s Preparing to unpack .../064-r-cran-rdpack_2.6.3-1_all.deb ...
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161s Selecting previously unselected package r-cran-reformulas.
161s Preparing to unpack .../065-r-cran-reformulas_0.4.4-1_all.deb ...
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161s Selecting previously unselected package r-cran-rlang.
161s Preparing to unpack .../066-r-cran-rlang_1.1.5-3_amd64.deb ...
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161s Selecting previously unselected package r-cran-rcppeigen.
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161s Selecting previously unselected package r-cran-statmod.
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161s Selecting previously unselected package r-cran-lme4.
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161s Selecting previously unselected package r-cran-coda.
161s Preparing to unpack .../070-r-cran-coda_0.19-4.1-1_all.deb ...
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161s Selecting previously unselected package r-cran-arm.
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161s Selecting previously unselected package r-cran-cli.
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161s Selecting previously unselected package r-cran-glue.
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161s Selecting previously unselected package r-cran-lifecycle.
161s Preparing to unpack .../074-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
161s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
161s Selecting previously unselected package r-cran-gtable.
161s Preparing to unpack .../075-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
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161s Selecting previously unselected package r-cran-isoband.
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161s Selecting previously unselected package r-cran-mgcv.
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161s Selecting previously unselected package r-cran-farver.
161s Preparing to unpack .../078-r-cran-farver_2.1.2-1_amd64.deb ...
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161s Selecting previously unselected package r-cran-labeling.
161s Preparing to unpack .../079-r-cran-labeling_0.4.3-1_all.deb ...
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161s Selecting previously unselected package r-cran-r6.
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161s Selecting previously unselected package r-cran-rcolorbrewer.
161s Preparing to unpack .../081-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ...
161s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ...
161s Selecting previously unselected package r-cran-viridislite.
161s Preparing to unpack .../082-r-cran-viridislite_0.4.3-1_all.deb ...
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161s Selecting previously unselected package r-cran-scales.
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161s Selecting previously unselected package r-cran-fansi.
161s Preparing to unpack .../084-r-cran-fansi_1.0.6-2_amd64.deb ...
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161s Selecting previously unselected package r-cran-magrittr.
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161s Selecting previously unselected package r-cran-utf8.
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161s Unpacking r-cran-utf8 (1.2.4-1) ...
161s Selecting previously unselected package r-cran-vctrs.
161s Preparing to unpack .../087-r-cran-vctrs_0.6.5-1_amd64.deb ...
161s Unpacking r-cran-vctrs (0.6.5-1) ...
161s Selecting previously unselected package r-cran-pillar.
161s Preparing to unpack .../088-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
161s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
161s Selecting previously unselected package r-cran-pkgconfig.
161s Preparing to unpack .../089-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
161s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
161s Selecting previously unselected package r-cran-tibble.
161s Preparing to unpack .../090-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
161s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
161s Selecting previously unselected package r-cran-withr.
161s Preparing to unpack .../091-r-cran-withr_3.0.2+dfsg-1_all.deb ...
161s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
161s Selecting previously unselected package r-cran-ggplot2.
161s Preparing to unpack .../092-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
161s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
161s Selecting previously unselected package r-cran-class.
161s Preparing to unpack .../093-r-cran-class_7.3-23-1_amd64.deb ...
161s Unpacking r-cran-class (7.3-23-1) ...
161s Selecting previously unselected package r-cran-proxy.
161s Preparing to unpack .../094-r-cran-proxy_0.4-27-1_amd64.deb ...
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161s Selecting previously unselected package r-cran-e1071.
161s Preparing to unpack .../095-r-cran-e1071_1.7-17-1_amd64.deb ...
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161s Selecting previously unselected package r-cran-codetools.
161s Preparing to unpack .../096-r-cran-codetools_0.2-20-1build1_all.deb ...
161s Unpacking r-cran-codetools (0.2-20-1build1) ...
161s Selecting previously unselected package r-cran-iterators.
161s Preparing to unpack .../097-r-cran-iterators_1.0.14-1build1_all.deb ...
161s Unpacking r-cran-iterators (1.0.14-1build1) ...
161s Selecting previously unselected package r-cran-foreach.
161s Preparing to unpack .../098-r-cran-foreach_1.5.2-1build1_all.deb ...
161s Unpacking r-cran-foreach (1.5.2-1build1) ...
161s Selecting previously unselected package r-cran-data.table.
161s Preparing to unpack .../099-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ...
161s Unpacking r-cran-data.table (1.17.0+dfsg-1) ...
161s Selecting previously unselected package r-cran-modelmetrics.
161s Preparing to unpack .../100-r-cran-modelmetrics_1.2.2.2-1build2_amd64.deb ...
161s Unpacking r-cran-modelmetrics (1.2.2.2-1build2) ...
161s Selecting previously unselected package r-cran-plyr.
161s Preparing to unpack .../101-r-cran-plyr_1.8.9-1_amd64.deb ...
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161s Selecting previously unselected package r-cran-proc.
161s Preparing to unpack .../102-r-cran-proc_1.18.5-1_amd64.deb ...
161s Unpacking r-cran-proc (1.18.5-1) ...
161s Selecting previously unselected package r-cran-generics.
161s Preparing to unpack .../103-r-cran-generics_0.1.4-1_all.deb ...
161s Unpacking r-cran-generics (0.1.4-1) ...
161s Selecting previously unselected package r-cran-tidyselect.
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161s Selecting previously unselected package r-cran-dplyr.
161s Preparing to unpack .../105-r-cran-dplyr_1.1.4-4_amd64.deb ...
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161s Selecting previously unselected package r-cran-cpp11.
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161s Selecting previously unselected package r-cran-tzdb.
161s Preparing to unpack .../107-r-cran-tzdb_0.5.0-1_amd64.deb ...
161s Unpacking r-cran-tzdb (0.5.0-1) ...
161s Selecting previously unselected package r-cran-clock.
161s Preparing to unpack .../108-r-cran-clock_0.7.2-1_amd64.deb ...
161s Unpacking r-cran-clock (0.7.2-1) ...
161s Selecting previously unselected package r-cran-gower.
161s Preparing to unpack .../109-r-cran-gower_1.0.2-1_amd64.deb ...
161s Unpacking r-cran-gower (1.0.2-1) ...
161s Selecting previously unselected package r-cran-sparsevctrs.
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161s Unpacking r-cran-sparsevctrs (0.2.0-2) ...
161s Selecting previously unselected package r-cran-hardhat.
161s Preparing to unpack .../111-r-cran-hardhat_1.4.2+dfsg-1_all.deb ...
161s Unpacking r-cran-hardhat (1.4.2+dfsg-1) ...
162s Selecting previously unselected package r-cran-survival.
162s Preparing to unpack .../112-r-cran-survival_3.8-6-1_amd64.deb ...
162s Unpacking r-cran-survival (3.8-6-1) ...
162s Selecting previously unselected package r-cran-rpart.
162s Preparing to unpack .../113-r-cran-rpart_4.1.24-1build1_amd64.deb ...
162s Unpacking r-cran-rpart (4.1.24-1build1) ...
162s Selecting previously unselected package r-cran-nnet.
162s Preparing to unpack .../114-r-cran-nnet_7.3-20-1_amd64.deb ...
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162s Selecting previously unselected package r-cran-shape.
162s Preparing to unpack .../115-r-cran-shape_1.4.6.1-1_all.deb ...
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162s Selecting previously unselected package r-cran-diagram.
162s Preparing to unpack .../116-r-cran-diagram_1.6.5-2_all.deb ...
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162s Selecting previously unselected package r-cran-kernsmooth.
162s Preparing to unpack .../117-r-cran-kernsmooth_2.23-26-1build1_amd64.deb ...
162s Unpacking r-cran-kernsmooth (2.23-26-1build1) ...
162s Selecting previously unselected package r-cran-digest.
162s Preparing to unpack .../118-r-cran-digest_0.6.39-1_amd64.deb ...
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162s Selecting previously unselected package r-cran-globals.
162s Preparing to unpack .../119-r-cran-globals_0.19.0-1_all.deb ...
162s Unpacking r-cran-globals (0.19.0-1) ...
162s Selecting previously unselected package r-cran-listenv.
162s Preparing to unpack .../120-r-cran-listenv_0.10.0+dfsg-1_all.deb ...
162s Unpacking r-cran-listenv (0.10.0+dfsg-1) ...
162s Selecting previously unselected package r-cran-parallelly.
162s Preparing to unpack .../121-r-cran-parallelly_1.42.0-1_amd64.deb ...
162s Unpacking r-cran-parallelly (1.42.0-1) ...
162s Selecting previously unselected package r-cran-future.
162s Preparing to unpack .../122-r-cran-future_1.34.0+dfsg-1_all.deb ...
162s Unpacking r-cran-future (1.34.0+dfsg-1) ...
162s Selecting previously unselected package r-cran-future.apply.
162s Preparing to unpack .../123-r-cran-future.apply_1.11.3+dfsg-1_all.deb ...
162s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ...
162s Selecting previously unselected package r-cran-numderiv.
162s Preparing to unpack .../124-r-cran-numderiv_2016.8-1.1-3build1_all.deb ...
162s Unpacking r-cran-numderiv (2016.8-1.1-3build1) ...
162s Selecting previously unselected package r-cran-progressr.
162s Preparing to unpack .../125-r-cran-progressr_0.15.1-1_all.deb ...
162s Unpacking r-cran-progressr (0.15.1-1) ...
162s Selecting previously unselected package r-cran-squarem.
162s Preparing to unpack .../126-r-cran-squarem_2021.1-1build1_all.deb ...
162s Unpacking r-cran-squarem (2021.1-1build1) ...
162s Selecting previously unselected package r-cran-lava.
162s Preparing to unpack .../127-r-cran-lava_1.8.2+dfsg-1_all.deb ...
162s Unpacking r-cran-lava (1.8.2+dfsg-1) ...
162s Selecting previously unselected package r-cran-prodlim.
162s Preparing to unpack .../128-r-cran-prodlim_2024.06.25-1_amd64.deb ...
162s Unpacking r-cran-prodlim (2024.06.25-1) ...
162s Selecting previously unselected package r-cran-ipred.
162s Preparing to unpack .../129-r-cran-ipred_0.9-15-1_amd64.deb ...
162s Unpacking r-cran-ipred (0.9-15-1) ...
162s Selecting previously unselected package r-cran-timechange.
162s Preparing to unpack .../130-r-cran-timechange_0.3.0-2_amd64.deb ...
162s Unpacking r-cran-timechange (0.3.0-2) ...
162s Selecting previously unselected package r-cran-lubridate.
162s Preparing to unpack .../131-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ...
162s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ...
162s Selecting previously unselected package r-cran-purrr.
162s Preparing to unpack .../132-r-cran-purrr_1.0.4-1_amd64.deb ...
162s Unpacking r-cran-purrr (1.0.4-1) ...
162s Selecting previously unselected package r-cran-stringi.
162s Preparing to unpack .../133-r-cran-stringi_1.8.4-1build2_amd64.deb ...
162s Unpacking r-cran-stringi (1.8.4-1build2) ...
162s Selecting previously unselected package r-cran-stringr.
162s Preparing to unpack .../134-r-cran-stringr_1.5.1-1_all.deb ...
162s Unpacking r-cran-stringr (1.5.1-1) ...
162s Selecting previously unselected package r-cran-tidyr.
162s Preparing to unpack .../135-r-cran-tidyr_1.3.1-1_amd64.deb ...
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162s Selecting previously unselected package r-cran-timedate.
162s Preparing to unpack .../136-r-cran-timedate_4052.112-1_amd64.deb ...
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162s Selecting previously unselected package r-cran-recipes.
162s Preparing to unpack .../137-r-cran-recipes_1.1.0+dfsg-1_all.deb ...
162s Unpacking r-cran-recipes (1.1.0+dfsg-1) ...
162s Selecting previously unselected package r-cran-reshape2.
162s Preparing to unpack .../138-r-cran-reshape2_1.4.4-2build2_amd64.deb ...
162s Unpacking r-cran-reshape2 (1.4.4-2build2) ...
162s Selecting previously unselected package r-cran-caret.
162s Preparing to unpack .../139-r-cran-caret_7.0-1+dfsg-1_amd64.deb ...
162s Unpacking r-cran-caret (7.0-1+dfsg-1) ...
162s Selecting previously unselected package r-cran-matrixstats.
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162s Unpacking r-cran-matrixstats (1.5.0-1) ...
162s Selecting previously unselected package r-cran-rcpparmadillo.
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162s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ...
162s Selecting previously unselected package r-cran-conquer.
162s Preparing to unpack .../142-r-cran-conquer_1.3.3-1_amd64.deb ...
162s Unpacking r-cran-conquer (1.3.3-1) ...
162s Selecting previously unselected package r-cran-evaluate.
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162s Selecting previously unselected package r-cran-foreign.
162s Preparing to unpack .../144-r-cran-foreign_0.8.91-1_amd64.deb ...
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162s Selecting previously unselected package r-cran-xfun.
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162s Selecting previously unselected package r-cran-highr.
162s Preparing to unpack .../146-r-cran-highr_0.11+dfsg-1_all.deb ...
162s Unpacking r-cran-highr (0.11+dfsg-1) ...
162s Selecting previously unselected package r-cran-yaml.
162s Preparing to unpack .../147-r-cran-yaml_2.3.10-1_amd64.deb ...
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162s Selecting previously unselected package libjs-mathjax.
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162s Selecting previously unselected package r-cran-knitr.
162s Preparing to unpack .../149-r-cran-knitr_1.51+dfsg-1_all.deb ...
162s Unpacking r-cran-knitr (1.51+dfsg-1) ...
162s Selecting previously unselected package r-cran-matrixmodels.
162s Preparing to unpack .../150-r-cran-matrixmodels_0.5-4-1_all.deb ...
162s Unpacking r-cran-matrixmodels (0.5-4-1) ...
162s Selecting previously unselected package r-cran-mi.
162s Preparing to unpack .../151-r-cran-mi_1.2-1_all.deb ...
162s Unpacking r-cran-mi (1.2-1) ...
162s Selecting previously unselected package r-cran-mnormt.
162s Preparing to unpack .../152-r-cran-mnormt_2.1.2-1_amd64.deb ...
162s Unpacking r-cran-mnormt (2.1.2-1) ...
162s Selecting previously unselected package r-cran-sparsem.
162s Preparing to unpack .../153-r-cran-sparsem_1.84-2-1_amd64.deb ...
162s Unpacking r-cran-sparsem (1.84-2-1) ...
162s Selecting previously unselected package r-cran-quantreg.
162s Preparing to unpack .../154-r-cran-quantreg_6.1-1_amd64.deb ...
162s Unpacking r-cran-quantreg (6.1-1) ...
162s Selecting previously unselected package r-cran-sn.
163s Preparing to unpack .../155-r-cran-sn_2.1.2-1_all.deb ...
163s Unpacking r-cran-sn (2.1.2-1) ...
163s Selecting previously unselected package r-cran-truncnorm.
163s Preparing to unpack .../156-r-cran-truncnorm_1.0-9-2_amd64.deb ...
163s Unpacking r-cran-truncnorm (1.0-9-2) ...
163s Setting up libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
163s Setting up libpixman-1-0:amd64 (0.46.4-1) ...
163s Setting up libsharpyuv0:amd64 (1.5.0-0.1build1) ...
163s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ...
163s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
163s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ...
163s Setting up libxrender1:amd64 (1:0.9.12-1) ...
163s Setting up libdatrie1:amd64 (0.2.14-1) ...
163s Setting up libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
163s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
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165s Processing triggers for man-db (2.13.1-1build1) ...
166s Processing triggers for install-info (7.2-5) ...
166s Processing triggers for libc-bin (2.42-2ubuntu4) ...
167s autopkgtest [03:20:55]: test run-unit-test: [-----------------------
167s BEGIN TEST missing_data.frame.R
167s 
167s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
167s Copyright (C) 2025 The R Foundation for Statistical Computing
167s Platform: x86_64-pc-linux-gnu
167s 
167s R is free software and comes with ABSOLUTELY NO WARRANTY.
167s You are welcome to redistribute it under certain conditions.
167s Type 'license()' or 'licence()' for distribution details.
167s 
167s R is a collaborative project with many contributors.
167s Type 'contributors()' for more information and
167s 'citation()' on how to cite R or R packages in publications.
167s 
167s Type 'demo()' for some demos, 'help()' for on-line help, or
167s 'help.start()' for an HTML browser interface to help.
167s Type 'q()' to quit R.
167s 
167s Loading required package: mi
167s > stopifnot(require(mi))
167s Loading required package: Matrix
168s Loading required package: stats4
168s mi (Version 1.2, packaged: 2025-09-01 20:01:42 UTC; ben)
168s mi  Copyright (C) 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015 Trustees of Columbia University
168s This program comes with ABSOLUTELY NO WARRANTY.
168s This is free software, and you are welcome to redistribute it
168s under the General Public License version 2 or later.
168s Execute RShowDoc('COPYING') for details.
168s > 
168s > rdf <- rdata.frame(N = 100, n_partial = 2, n_full = 2)
168s > mdf <- missing_data.frame(rdf$obs)
168s > 
168s > rdf <- rdata.frame(N = 100, n_partial = 5, n_full = 1, 
168s +                    types = c("ordinal", "cont", "count", "binary",
168s +                              "positive", "nominal"))
168s > mdf <- missing_data.frame(rdf$obs)
168s > mdf <- missing_data.frame(rdf$obs, favor_positive = TRUE)
168s > 
168s > rdf <- rdata.frame(N = 100, n_partial = 4, n_full = 1, experiment = TRUE,
168s +                    types = c("treatment", "cont", "count", "binary",
168s +                              "positive"))
168s > mdf <- missing_data.frame(rdf$obs, subclass = "experiment", concept = 
168s +                           as.factor(c("treatment", rep("covariate", 3), "outcome")))
168s > 
168s > rdf <- rdata.frame(N = 100, n_partial = 5, n_full = 0, types = "ordinal")
168s > mdf <- missing_data.frame(rdf$obs, subclass = "allcategorical")
168s > 
168s BEGIN TEST missing_variable.R
168s 
168s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
168s Copyright (C) 2025 The R Foundation for Statistical Computing
168s Platform: x86_64-pc-linux-gnu
168s 
168s R is free software and comes with ABSOLUTELY NO WARRANTY.
168s You are welcome to redistribute it under certain conditions.
168s Type 'license()' or 'licence()' for distribution details.
168s 
168s R is a collaborative project with many contributors.
168s Type 'contributors()' for more information and
168s 'citation()' on how to cite R or R packages in publications.
168s 
168s Type 'demo()' for some demos, 'help()' for on-line help, or
168s 'help.start()' for an HTML browser interface to help.
168s Type 'q()' to quit R.
168s 
168s > stopifnot(require(mi))
168s Loading required package: mi
168s Loading required package: Matrix
169s Loading required package: stats4
169s mi (Version 1.2, packaged: 2025-09-01 20:01:42 UTC; ben)
169s mi  Copyright (C) 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015 Trustees of Columbia University
169s This program comes with ABSOLUTELY NO WARRANTY.
169s This is free software, and you are welcome to redistribute it
169s under the General Public License version 2 or later.
169s Execute RShowDoc('COPYING') for details.
169s > 
169s > x <- rnorm(10)
169s > x[1] <- NA
169s > y <- missing_variable(x, type = "continuous")
169s > 
169s > y <- missing_variable(x, type = "irrelevant")
169s > x <- rep(1, 10)
169s > y <- missing_variable(x, type = "fixed")
169s > x <- rep(1:5, each = 2)
169s > y <- missing_variable(x, type = "group")
169s > 
169s > x[1] <- NA
169s > y <- missing_variable(x, type = "unordered-categorical")
169s > y <- missing_variable(x, type = "ordered-categorical")
169s > y <- missing_variable(x, type = "interval")
169s > 
169s > x <- rbinom(10, size = 1, prob = 0.5)
169s > x[1] <- NA
169s > y <- missing_variable(x, type = "binary")
169s > y <- missing_variable(x, type = "grouped-binary", strata = rep(c("A", "B"), each = 5))
169s Loading required namespace: survival
169s > 
169s > x <- runif(10)
169s > x[1] <- NA
169s > y <- missing_variable(x, type = "bounded-continuous", lower = 0, upper = 1)
169s Loading required namespace: truncnorm
169s > y <- missing_variable(x, type = "positive-continuous")
169s > x[which.min(x)] <- 0
169s > y <- missing_variable(x, type = "nonnegative-continuous")
169s > 
169s > x <- rpois(10, lambda = 5)
169s > x[1] <- NA
169s > y <- missing_variable(x, type = "count")
169s > 
169s > 
170s autopkgtest [03:20:58]: test run-unit-test: -----------------------]
170s autopkgtest [03:20:58]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
170s run-unit-test        PASS
170s autopkgtest [03:20:58]: test pkg-r-autopkgtest: preparing testbed
170s Reading package lists...
171s Building dependency tree...
171s Reading state information...
171s Solving dependencies...
171s The following NEW packages will be installed:
171s   build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu
171s   dctrl-tools g++ g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc
171s   gcc-15 gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15
171s   gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8
171s   libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev
171s   libdeflate-dev libgcc-15-dev libgfortran-15-dev libhwasan0 libicu-dev
171s   libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev
171s   liblsan0 liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0
171s   libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libquadmath0
171s   libreadline-dev libstdc++-15-dev libtirpc-dev libtsan2 libubsan1 libzstd-dev
171s   linux-libc-dev pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto
171s   zlib1g-dev
171s 0 upgraded, 61 newly installed, 0 to remove and 0 not upgraded.
171s Need to get 112 MB of archives.
171s After this operation, 402 MB of additional disk space will be used.
171s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
171s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
171s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
171s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
171s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
171s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
171s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
171s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
172s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
172s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
172s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
172s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
172s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
172s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
172s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
172s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
172s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
172s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
172s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
172s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
172s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
173s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
173s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
173s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
173s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
173s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
173s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
173s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
173s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
173s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
173s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
173s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
173s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
174s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
174s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
174s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
174s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
174s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
174s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
174s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
174s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
174s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
174s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
174s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
174s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
174s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
174s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
174s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
174s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
174s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
174s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
174s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
174s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
174s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
174s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
174s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
174s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
174s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
174s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
174s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
174s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
175s Fetched 112 MB in 3s (32.7 MB/s)
175s Selecting previously unselected package libc-dev-bin.
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175s Preparing to unpack .../00-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
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175s Selecting previously unselected package linux-libc-dev:amd64.
175s Preparing to unpack .../01-linux-libc-dev_6.19.0-3.3_amd64.deb ...
175s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
175s Selecting previously unselected package libcrypt-dev:amd64.
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175s Selecting previously unselected package libc6-dev:amd64.
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175s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
175s Selecting previously unselected package libisl23:amd64.
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175s Selecting previously unselected package libmpc3:amd64.
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176s Selecting previously unselected package build-essential.
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176s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
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176s Selecting previously unselected package liblapack-dev:amd64.
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176s Selecting previously unselected package libpcre2-dev:amd64.
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177s Selecting previously unselected package libpkgconf3:amd64.
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177s Selecting previously unselected package zlib1g-dev:amd64.
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177s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
177s Selecting previously unselected package libpng-dev:amd64.
177s Preparing to unpack .../52-libpng-dev_1.6.54-1_amd64.deb ...
177s Unpacking libpng-dev:amd64 (1.6.54-1) ...
177s Selecting previously unselected package libreadline-dev:amd64.
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177s Unpacking libreadline-dev:amd64 (8.3-3) ...
177s Selecting previously unselected package libzstd-dev:amd64.
177s Preparing to unpack .../54-libzstd-dev_1.5.7+dfsg-3_amd64.deb ...
177s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-3) ...
177s Selecting previously unselected package liblzma-dev:amd64.
177s Preparing to unpack .../55-liblzma-dev_5.8.2-2_amd64.deb ...
177s Unpacking liblzma-dev:amd64 (5.8.2-2) ...
177s Selecting previously unselected package pkgconf-bin.
177s Preparing to unpack .../56-pkgconf-bin_1.8.1-4build1_amd64.deb ...
177s Unpacking pkgconf-bin (1.8.1-4build1) ...
177s Selecting previously unselected package pkgconf:amd64.
177s Preparing to unpack .../57-pkgconf_1.8.1-4build1_amd64.deb ...
177s Unpacking pkgconf:amd64 (1.8.1-4build1) ...
177s Selecting previously unselected package libtirpc-dev:amd64.
177s Preparing to unpack .../58-libtirpc-dev_1.3.6+ds-1_amd64.deb ...
177s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ...
177s Selecting previously unselected package r-base-dev.
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177s Unpacking pkg-r-autopkgtest (20250812) ...
177s Setting up libzstd-dev:amd64 (1.5.7+dfsg-3) ...
177s Setting up linux-libc-dev:amd64 (6.19.0-3.3) ...
177s Setting up libpcre2-16-0:amd64 (10.46-1) ...
177s Setting up libpcre2-32-0:amd64 (10.46-1) ...
177s Setting up libtirpc-dev:amd64 (1.3.6+ds-1) ...
177s Setting up libpkgconf3:amd64 (1.8.1-4build1) ...
177s Setting up rpcsvc-proto (1.4.3-1build1) ...
177s Setting up libquadmath0:amd64 (16-20260208-1ubuntu1) ...
177s Setting up libmpc3:amd64 (1.3.1-2) ...
177s Setting up icu-devtools (78.2-1ubuntu1) ...
177s Setting up pkgconf-bin (1.8.1-4build1) ...
177s Setting up liblzma-dev:amd64 (5.8.2-2) ...
177s Setting up libubsan1:amd64 (16-20260208-1ubuntu1) ...
177s Setting up libpcre2-posix3:amd64 (10.46-1) ...
177s Setting up libhwasan0:amd64 (16-20260208-1ubuntu1) ...
177s Setting up libcrypt-dev:amd64 (1:4.5.1-1) ...
177s Setting up libasan8:amd64 (16-20260208-1ubuntu1) ...
177s Setting up libtsan2:amd64 (16-20260208-1ubuntu1) ...
177s Setting up libisl23:amd64 (0.27-1build1) ...
177s Setting up libc-dev-bin (2.42-2ubuntu4) ...
177s Setting up libdeflate-dev:amd64 (1.23-2build1) ...
177s Setting up libcc1-0:amd64 (16-20260208-1ubuntu1) ...
177s Setting up liblsan0:amd64 (16-20260208-1ubuntu1) ...
177s Setting up libblas-dev:amd64 (3.12.1-7ubuntu1) ...
177s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
177s Setting up dctrl-tools (2.24-3build4) ...
177s Setting up libitm1:amd64 (16-20260208-1ubuntu1) ...
177s Setting up libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
177s Setting up cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
177s Setting up libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
177s Setting up pkgconf:amd64 (1.8.1-4build1) ...
177s Setting up gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
177s Setting up liblapack-dev:amd64 (3.12.1-7ubuntu1) ...
177s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
177s Setting up cpp-15 (15.2.0-12ubuntu1) ...
177s Setting up libc6-dev:amd64 (2.42-2ubuntu4) ...
177s Setting up libicu-dev:amd64 (78.2-1ubuntu1) ...
177s Setting up libbz2-dev:amd64 (1.0.8-6build2) ...
177s Setting up cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
177s Setting up gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
177s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ...
177s Setting up libncurses-dev:amd64 (6.6+20251231-1) ...
177s Setting up libpcre2-dev:amd64 (10.46-1) ...
177s Setting up gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
177s Setting up libreadline-dev:amd64 (8.3-3) ...
177s Setting up gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
177s Setting up gcc-15 (15.2.0-12ubuntu1) ...
177s Setting up libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
177s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
177s Setting up cpp (4:15.2.0-4ubuntu1) ...
177s Setting up libjpeg8-dev:amd64 (8c-2ubuntu12) ...
177s Setting up gfortran-15 (15.2.0-12ubuntu1) ...
177s Setting up g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
177s Setting up libpng-dev:amd64 (1.6.54-1) ...
177s Setting up libjpeg-dev:amd64 (8c-2ubuntu12) ...
177s Setting up gcc (4:15.2.0-4ubuntu1) ...
177s Setting up g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
177s Setting up g++-15 (15.2.0-12ubuntu1) ...
177s Setting up gfortran (4:15.2.0-4ubuntu1) ...
177s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
177s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
177s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
177s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
177s Setting up g++ (4:15.2.0-4ubuntu1) ...
177s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
177s Setting up build-essential (12.12ubuntu2) ...
177s Setting up r-base-dev (4.5.2-1ubuntu2) ...
177s Setting up pkg-r-autopkgtest (20250812) ...
177s Processing triggers for libc-bin (2.42-2ubuntu4) ...
177s Processing triggers for man-db (2.13.1-1build1) ...
177s Processing triggers for install-info (7.2-5) ...
178s autopkgtest [03:21:06]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
178s autopkgtest [03:21:06]: test pkg-r-autopkgtest: [-----------------------
178s Test: Try to load the R library mi
178s 
178s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
178s Copyright (C) 2025 The R Foundation for Statistical Computing
178s Platform: x86_64-pc-linux-gnu
178s 
178s R is free software and comes with ABSOLUTELY NO WARRANTY.
178s You are welcome to redistribute it under certain conditions.
178s Type 'license()' or 'licence()' for distribution details.
178s 
178s R is a collaborative project with many contributors.
178s Type 'contributors()' for more information and
178s 'citation()' on how to cite R or R packages in publications.
178s 
178s Type 'demo()' for some demos, 'help()' for on-line help, or
178s 'help.start()' for an HTML browser interface to help.
178s Type 'q()' to quit R.
178s 
178s > library('mi')
178s Loading required package: Matrix
179s Loading required package: stats4
179s mi (Version 1.2, packaged: 2025-09-01 20:01:42 UTC; ben)
179s mi  Copyright (C) 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015 Trustees of Columbia University
179s This program comes with ABSOLUTELY NO WARRANTY.
179s This is free software, and you are welcome to redistribute it
179s under the General Public License version 2 or later.
179s Execute RShowDoc('COPYING') for details.
179s > 
180s autopkgtest [03:21:08]: test pkg-r-autopkgtest: -----------------------]
180s pkg-r-autopkgtest    PASS
180s autopkgtest [03:21:08]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
180s autopkgtest [03:21:08]: @@@@@@@@@@@@@@@@@@@@ summary
180s run-unit-test        PASS
180s pkg-r-autopkgtest    PASS