0s autopkgtest [05:22:23]: starting date and time: 2026-02-10 05:22:23+0000
  0s autopkgtest [05:22:23]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [05:22:23]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ibqtev3b/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-cran-heatmaply --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-10.secgroup --name adt-resolute-amd64-r-cran-heatmaply-20260210-052223-juju-7f2275-prod-proposed-migration-environment-2-26878bf8-74ac-498a-8526-d91a8ffcd5fc --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  4s Creating nova instance adt-resolute-amd64-r-cran-heatmaply-20260210-052223-juju-7f2275-prod-proposed-migration-environment-2-26878bf8-74ac-498a-8526-d91a8ffcd5fc from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 72s autopkgtest [05:23:35]: testbed dpkg architecture: amd64
 73s autopkgtest [05:23:36]: testbed apt version: 3.1.14
 73s autopkgtest [05:23:36]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 73s autopkgtest [05:23:36]: testbed release detected to be: None
 74s autopkgtest [05:23:37]: updating testbed package index (apt update)
 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 74s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 74s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 74s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB]
 74s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [178 kB]
 74s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1727 kB]
 74s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [266 kB]
 74s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [219 kB]
 74s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [6184 B]
 74s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B]
 74s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [792 kB]
 74s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1787 kB]
 75s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.5 kB]
 75s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB]
 75s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B]
 75s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 75s Fetched 5197 kB in 1s (5830 kB/s)
 76s Reading package lists...
 76s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 76s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 76s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 76s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 77s Reading package lists...
 77s Reading package lists...
 77s Building dependency tree...
 77s Reading state information...
 77s Calculating upgrade...
 77s The following package was automatically installed and is no longer required:
 77s   libpython3.13
 77s Use 'sudo apt autoremove' to remove it.
 77s The following NEW packages will be installed:
 77s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 77s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 77s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 77s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 77s The following packages will be upgraded:
 77s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 77s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 77s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 77s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 77s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbrotli1 libbsd0
 77s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 77s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 78s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 78s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 78s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 78s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 78s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 78s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 78s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 78s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 78s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 78s 91 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 78s Need to get 237 MB of archives.
 78s After this operation, 339 MB of additional disk space will be used.
 78s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 78s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 78s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 78s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 78s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 78s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 78s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 78s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 78s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 78s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 78s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 78s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 78s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 78s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 78s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 78s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 78s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 78s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 78s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 78s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 78s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 78s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 78s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 78s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 78s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 78s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 78s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 78s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 78s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 78s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 78s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 78s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 78s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 78s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 78s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 78s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 78s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 78s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 78s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 78s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 78s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 78s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 78s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 78s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 78s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 78s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 78s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 78s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 78s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 78s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 78s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 78s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 78s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 78s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 78s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 78s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 78s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 78s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 78s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 78s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 78s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 78s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 78s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 79s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 79s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 79s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 79s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 79s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 79s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 79s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 79s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 79s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli1 amd64 1.2.0-3 [343 kB]
 79s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 79s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 79s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 79s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 79s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 79s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 79s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 79s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 79s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 79s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 79s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 81s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 82s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 82s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 82s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 82s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 82s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 82s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 82s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 82s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 82s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 82s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 82s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 82s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 82s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 82s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 82s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 82s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 82s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 82s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 82s Fetched 237 MB in 5s (50.9 MB/s)
 83s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 83s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 83s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 83s Setting up debianutils (5.23.2build1) ...
 83s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 83s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 83s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
 83s Setting up dash (0.5.12-12ubuntu3) ...
 83s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 83s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
 83s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
 83s Setting up findutils (4.10.0-3build2) ...
 83s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 83s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
 83s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
 83s Setting up sed (4.9-2build3) ...
 83s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 83s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
 83s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
 83s Setting up tar (1.35+dfsg-3.1build2) ...
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 91s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ...
 91s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
 91s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
 91s amd64-microcode: microcode will be updated at next boot
 91s Setting up man-db (2.13.1-1build1) ...
 91s Updating database of manual pages ...
 92s man-db.service is a disabled or a static unit not running, not starting it.
 92s Setting up libjansson4:amd64 (2.14-2build4) ...
 92s Setting up libglib2.0-data (2.87.2-2) ...
 92s Setting up pollinate (4.33-4ubuntu5) ...
102s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
102s Setting up libwrap0:amd64 (7.6.q-36build2) ...
102s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
104s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
104s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
104s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
104s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
104s Setting up patch (2.8-2build1) ...
104s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
104s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
104s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
104s Setting up lsof (4.99.4+dfsg-2build2) ...
104s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
104s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
104s Setting up dracut-install (109-11ubuntu1) ...
104s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
104s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
104s Setting up pnp.ids (0.394-1build1) ...
104s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
104s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
104s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
104s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
104s Setting up mawk (1.3.4.20260129-1) ...
104s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
104s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
104s Setting up linux-image-virtual (6.19.0-3.3) ...
104s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
104s Setting up libbsd0:amd64 (0.12.2-2build2) ...
104s Setting up libdrm-common (2.4.131-1) ...
104s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
104s Setting up dbus-bin (1.16.2-2ubuntu3) ...
104s Setting up libonig5:amd64 (6.9.10-1build1) ...
104s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
104s Setting up ethtool (1:6.15-3build1) ...
104s Setting up python3-referencing (0.36.2-1ubuntu2) ...
104s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
104s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
104s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
104s Setting up tcpdump (4.99.5-2ubuntu3) ...
104s Setting up linux-image-generic (6.19.0-3.3) ...
104s Setting up wget (1.25.0-2ubuntu4) ...
104s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
104s Setting up iptables (1.8.11-2ubuntu3) ...
104s Setting up iproute2 (6.18.0-1ubuntu1) ...
104s Setting up linux-headers-generic (6.19.0-3.3) ...
104s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
104s Setting up hwdata (0.394-1build1) ...
104s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
104s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
104s No schema files found: doing nothing.
104s Setting up dbus (1.16.2-2ubuntu3) ...
104s A reboot is required to replace the running dbus-daemon.
104s Please reboot the system when convenient.
104s Setting up shared-mime-info (2.4-5build3) ...
105s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
105s Setting up pciutils (1:3.14.0-1build2) ...
105s Setting up python3-markdown-it (3.0.0-3build1) ...
105s Setting up libdrm2:amd64 (2.4.131-1) ...
105s Setting up libpython3.14:amd64 (3.14.2-1) ...
105s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
105s Setting up linux-tools-common (6.19.0-3.3) ...
105s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
105s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
105s Setting up apt (3.1.15) ...
106s Setting up linux-headers-virtual (6.19.0-3.3) ...
106s Setting up linux-generic (6.19.0-3.3) ...
106s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
106s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
106s Setting up ubuntu-standard (1.564) ...
106s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
106s Setting up linux-virtual (6.19.0-3.3) ...
106s Setting up linux-perf (6.19.0-3.3) ...
106s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
106s Processing triggers for debianutils (5.23.2build1) ...
106s Processing triggers for install-info (7.2-5) ...
106s Processing triggers for initramfs-tools (0.150ubuntu7) ...
106s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
110s Processing triggers for libc-bin (2.42-2ubuntu4) ...
110s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
110s /etc/kernel/postinst.d/initramfs-tools:
110s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
114s /etc/kernel/postinst.d/zz-update-grub:
114s Sourcing file `/etc/default/grub'
114s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
114s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
114s Generating grub configuration file ...
114s Found linux image: /boot/vmlinuz-6.19.0-3-generic
114s Found initrd image: /boot/initrd.img-6.19.0-3-generic
114s Found linux image: /boot/vmlinuz-6.18.0-9-generic
114s Found initrd image: /boot/initrd.img-6.18.0-9-generic
114s Warning: os-prober will not be executed to detect other bootable partitions.
114s Systems on them will not be added to the GRUB boot configuration.
114s Check GRUB_DISABLE_OS_PROBER documentation entry.
114s Adding boot menu entry for UEFI Firmware Settings ...
114s done
114s autopkgtest [05:24:17]: upgrading testbed (apt dist-upgrade and autopurge)
115s Reading package lists...
115s Building dependency tree...
115s Reading state information...
115s Calculating upgrade...
115s The following package was automatically installed and is no longer required:
115s   libpython3.13
115s Use 'sudo apt autoremove' to remove it.
115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
115s Reading package lists...
116s Building dependency tree...
116s Reading state information...
116s Solving dependencies...
116s The following packages will be REMOVED:
116s   libpython3.13*
116s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
116s After this operation, 7599 kB disk space will be freed.
116s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
116s Removing libpython3.13:amd64 (3.13.11-1) ...
116s Processing triggers for libc-bin (2.42-2ubuntu4) ...
116s autopkgtest [05:24:19]: rebooting testbed after setup commands that affected boot
144s autopkgtest [05:24:47]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
146s autopkgtest [05:24:49]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-heatmaply
147s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-heatmaply 1.6.0+dfsg-1 (dsc) [2532 B]
147s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-heatmaply 1.6.0+dfsg-1 (tar) [76.5 kB]
147s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-heatmaply 1.6.0+dfsg-1 (diff) [3416 B]
147s gpgv: Signature made Thu Dec 25 05:25:21 2025 UTC
147s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
147s gpgv:                issuer "plessy@debian.org"
147s gpgv: Can't check signature: No public key
147s dpkg-source: warning: cannot verify inline signature for ./r-cran-heatmaply_1.6.0+dfsg-1.dsc: no acceptable signature found
147s autopkgtest [05:24:50]: testing package r-cran-heatmaply version 1.6.0+dfsg-1
148s autopkgtest [05:24:51]: build not needed
150s autopkgtest [05:24:53]: test run-unit-test: preparing testbed
150s Reading package lists...
150s Building dependency tree...
150s Reading state information...
150s Solving dependencies...
151s The following NEW packages will be installed:
151s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
151s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax
151s   javascript-common libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1
151s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0
151s   libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3
151s   libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables
151s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax
151s   libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify
151s   libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 liblerc4
151s   liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
151s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
151s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
151s   libxft2 libxrender1 libxss1 libxt6t64 node-bootstrap-sass node-html5shiv
151s   node-normalize.css pandoc pandoc-data r-base-core r-cran-askpass
151s   r-cran-assertthat r-cran-base64enc r-cran-bitops r-cran-brio r-cran-bslib
151s   r-cran-ca r-cran-cachem r-cran-callr r-cran-catools r-cran-cli
151s   r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-colourpicker
151s   r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon r-cran-crosstalk
151s   r-cran-curl r-cran-data.table r-cran-dendextend r-cran-desc r-cran-diffobj
151s   r-cran-digest r-cran-dplyr r-cran-egg r-cran-evaluate r-cran-fansi
151s   r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-foreach r-cran-fs
151s   r-cran-gclus r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-glue
151s   r-cran-gplots r-cran-gridextra r-cran-gtable r-cran-gtools r-cran-heatmaply
151s   r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr
151s   r-cran-isoband r-cran-iterators r-cran-jquerylib r-cran-jsonlite
151s   r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice
151s   r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass
151s   r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mime r-cran-miniui
151s   r-cran-nlme r-cran-openssl r-cran-permute r-cran-pillar r-cran-pkgbuild
151s   r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plotly r-cran-plyr
151s   r-cran-praise r-cran-processx r-cran-promises r-cran-ps r-cran-purrr
151s   r-cran-qap r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp
151s   r-cran-registry r-cran-reshape2 r-cran-rex r-cran-rlang r-cran-rmarkdown
151s   r-cran-rprojroot r-cran-s7 r-cran-sass r-cran-scales r-cran-seriation
151s   r-cran-shiny r-cran-shinyjs r-cran-sourcetools r-cran-stringi r-cran-stringr
151s   r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect
151s   r-cran-tinytex r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan
151s   r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-webshot r-cran-withr
151s   r-cran-xfun r-cran-xtable r-cran-yaml unzip x11-common xdg-utils zip
151s 0 upgraded, 193 newly installed, 0 to remove and 0 not upgraded.
151s Need to get 169 MB of archives.
151s After this operation, 526 MB of additional disk space will be used.
151s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
151s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
151s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
151s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
151s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
151s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
152s Get:7 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
152s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
152s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
152s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
152s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
152s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
152s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
152s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
152s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
152s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
152s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
152s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
152s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
152s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
152s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
152s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
152s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
152s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
152s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
152s Get:26 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
152s Get:27 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
152s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
152s Get:29 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
152s Get:30 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
152s Get:31 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
152s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
152s Get:33 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
152s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
152s Get:35 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
152s Get:36 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
152s Get:37 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
152s Get:38 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
152s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
152s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
153s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
153s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
153s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
153s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
153s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
153s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
153s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
153s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
153s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
153s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
153s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
153s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
153s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
153s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
153s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
153s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
153s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
153s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
153s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
153s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
153s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
153s Get:62 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
153s Get:63 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
153s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
154s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
154s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
154s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
154s Get:68 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
154s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB]
154s Get:70 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB]
154s Get:71 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-assertthat all 0.2.1-3 [57.6 kB]
154s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
154s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
154s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB]
154s Get:75 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
154s Get:76 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
154s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
154s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
154s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
154s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
154s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
154s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
155s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
155s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
155s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
155s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
155s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
155s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
155s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
155s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
155s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ca all 0.71.1-2build2 [242 kB]
155s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
155s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
155s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
155s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-catools amd64 1.18.3-1 [209 kB]
155s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cluster amd64 2.1.8.2-1 [570 kB]
155s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
155s Get:98 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB]
155s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
155s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
155s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
155s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB]
155s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
155s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
155s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
155s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
155s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
155s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
155s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
155s Get:110 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB]
155s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
155s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
155s Get:113 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
155s Get:114 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
155s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
155s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
156s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
156s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
156s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
156s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
156s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
156s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
156s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
156s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
156s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
156s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
156s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
156s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
156s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
156s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
156s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
156s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
156s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
156s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
156s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-miniui all 0.1.2-1 [37.3 kB]
156s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shinyjs all 2.1.0-1build1 [967 kB]
156s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB]
156s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
156s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rex all 1.2.1-1build1 [126 kB]
156s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
156s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB]
156s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
156s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-covr amd64 3.6.4+dfsg-1 [303 kB]
156s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
156s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crosstalk all 1.2.2+dfsg-1 [181 kB]
156s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
156s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB]
156s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB]
156s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dendextend all 1.19.1+dfsg-1 [1003 kB]
156s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB]
156s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB]
157s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
157s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
157s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
157s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
157s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
157s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
157s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
157s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
157s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-egg all 0.4.5-3build2 [836 kB]
157s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
157s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
157s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gclus all 1.3.3-1 [411 kB]
157s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtools amd64 3.9.5-1build1 [345 kB]
157s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gdata all 3.0.1-1build1 [491 kB]
157s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
157s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB]
157s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gplots all 3.3.0-1 [3825 kB]
157s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
157s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
157s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
157s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
157s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plotly all 4.10.4+dfsg-4 [3635 kB]
157s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
157s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB]
157s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-qap amd64 0.1-2-1 [365 kB]
157s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-registry all 0.5-1-2build2 [202 kB]
157s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tsp amd64 1.2-4-1 [627 kB]
157s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-permute all 0.9-8-1 [237 kB]
157s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB]
157s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
157s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
158s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB]
158s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vegan amd64 2.6-10+dfsg-3 [3137 kB]
158s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-seriation amd64 1.5.7-1 [1343 kB]
158s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-webshot all 0.5.5-1 [185 kB]
158s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-heatmaply all 1.6.0+dfsg-1 [283 kB]
158s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB]
158s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB]
158s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB]
158s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB]
158s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB]
158s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB]
158s Preconfiguring packages ...
158s Fetched 169 MB in 7s (23.5 MB/s)
158s Selecting previously unselected package fonts-dejavu-mono.
158s (Reading database ... 
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(Reading database ... 125269 files and directories currently installed.)
158s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ...
158s Unpacking fonts-dejavu-mono (2.37-8build1) ...
158s Selecting previously unselected package fonts-dejavu-core.
158s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ...
158s Unpacking fonts-dejavu-core (2.37-8build1) ...
158s Selecting previously unselected package fontconfig-config.
158s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
158s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
158s Selecting previously unselected package libfontconfig1:amd64.
158s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
158s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
159s Selecting previously unselected package fontconfig.
159s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
159s Unpacking fontconfig (2.17.1-3ubuntu1) ...
159s Selecting previously unselected package fonts-font-awesome.
159s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ...
159s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
159s Selecting previously unselected package fonts-glyphicons-halflings.
159s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
159s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
159s Selecting previously unselected package fonts-mathjax.
159s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
159s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
159s Selecting previously unselected package javascript-common.
159s Preparing to unpack .../008-javascript-common_12+nmu1build1_all.deb ...
159s Unpacking javascript-common (12+nmu1build1) ...
159s Selecting previously unselected package libblas3:amd64.
159s Preparing to unpack .../009-libblas3_3.12.1-7ubuntu1_amd64.deb ...
159s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ...
159s Selecting previously unselected package libpixman-1-0:amd64.
159s Preparing to unpack .../010-libpixman-1-0_0.46.4-1_amd64.deb ...
159s Unpacking libpixman-1-0:amd64 (0.46.4-1) ...
159s Selecting previously unselected package libxcb-render0:amd64.
159s Preparing to unpack .../011-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
159s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
159s Selecting previously unselected package libxcb-shm0:amd64.
159s Preparing to unpack .../012-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
159s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
159s Selecting previously unselected package libxrender1:amd64.
159s Preparing to unpack .../013-libxrender1_1%3a0.9.12-1_amd64.deb ...
159s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
159s Selecting previously unselected package libcairo2:amd64.
159s Preparing to unpack .../014-libcairo2_1.18.4-3_amd64.deb ...
159s Unpacking libcairo2:amd64 (1.18.4-3) ...
159s Selecting previously unselected package libdatrie1:amd64.
159s Preparing to unpack .../015-libdatrie1_0.2.14-1_amd64.deb ...
159s Unpacking libdatrie1:amd64 (0.2.14-1) ...
159s Selecting previously unselected package libdeflate0:amd64.
159s Preparing to unpack .../016-libdeflate0_1.23-2build1_amd64.deb ...
159s Unpacking libdeflate0:amd64 (1.23-2build1) ...
159s Selecting previously unselected package libgfortran5:amd64.
159s Preparing to unpack .../017-libgfortran5_16-20260208-1ubuntu1_amd64.deb ...
159s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ...
159s Selecting previously unselected package libgomp1:amd64.
159s Preparing to unpack .../018-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
159s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
159s Selecting previously unselected package libgraphite2-3:amd64.
159s Preparing to unpack .../019-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ...
159s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
159s Selecting previously unselected package libharfbuzz0b:amd64.
159s Preparing to unpack .../020-libharfbuzz0b_12.3.2-1_amd64.deb ...
159s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ...
159s Selecting previously unselected package x11-common.
159s Preparing to unpack .../021-x11-common_1%3a7.7+24ubuntu1_all.deb ...
159s Unpacking x11-common (1:7.7+24ubuntu1) ...
159s Selecting previously unselected package libice6:amd64.
159s Preparing to unpack .../022-libice6_2%3a1.1.1-1build1_amd64.deb ...
159s Unpacking libice6:amd64 (2:1.1.1-1build1) ...
159s Selecting previously unselected package libjpeg-turbo8:amd64.
159s Preparing to unpack .../023-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ...
159s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
159s Selecting previously unselected package libjpeg8:amd64.
159s Preparing to unpack .../024-libjpeg8_8c-2ubuntu12_amd64.deb ...
159s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ...
159s Selecting previously unselected package libjs-bootstrap.
159s Preparing to unpack .../025-libjs-bootstrap_3.4.1+dfsg-6_all.deb ...
159s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ...
159s Selecting previously unselected package libjs-popper.js.
159s Preparing to unpack .../026-libjs-popper.js_1.16.1+ds-6build1_all.deb ...
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161s Selecting previously unselected package r-cran-shiny.
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161s Selecting previously unselected package r-cran-rmarkdown.
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161s Selecting previously unselected package r-cran-htmlwidgets.
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161s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ...
161s Selecting previously unselected package r-cran-miniui.
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161s Selecting previously unselected package r-cran-shinyjs.
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161s Selecting previously unselected package r-cran-colourpicker.
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161s Selecting previously unselected package r-cran-lazyeval.
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161s Selecting previously unselected package r-cran-rex.
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162s Selecting previously unselected package r-cran-curl.
162s Preparing to unpack .../139-r-cran-curl_7.0.0+dfsg-1_amd64.deb ...
162s Unpacking r-cran-curl (7.0.0+dfsg-1) ...
162s Selecting previously unselected package r-cran-openssl.
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162s Unpacking r-cran-openssl (2.3.2+dfsg-1) ...
162s Selecting previously unselected package r-cran-httr.
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162s Selecting previously unselected package r-cran-covr.
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162s Selecting previously unselected package r-cran-cpp11.
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162s Selecting previously unselected package r-cran-crosstalk.
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162s Selecting previously unselected package r-cran-data.table.
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162s Selecting previously unselected package r-cran-gridextra.
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162s Selecting previously unselected package r-cran-viridis.
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162s Selecting previously unselected package r-cran-dendextend.
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162s Selecting previously unselected package r-cran-desc.
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162s Selecting previously unselected package r-cran-diffobj.
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162s Selecting previously unselected package r-cran-generics.
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162s Selecting previously unselected package r-cran-utf8.
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162s Selecting previously unselected package r-cran-pillar.
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162s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
162s Selecting previously unselected package r-cran-fansi.
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162s Selecting previously unselected package r-cran-pkgconfig.
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162s Selecting previously unselected package r-cran-tibble.
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162s Selecting previously unselected package r-cran-tidyselect.
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162s Selecting previously unselected package r-cran-dplyr.
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162s Selecting previously unselected package r-cran-egg.
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162s Selecting previously unselected package r-cran-iterators.
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162s Selecting previously unselected package r-cran-foreach.
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162s Selecting previously unselected package r-cran-gclus.
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162s Selecting previously unselected package r-cran-gtools.
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162s Unpacking r-cran-gtools (3.9.5-1build1) ...
162s Selecting previously unselected package r-cran-gdata.
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162s Unpacking r-cran-gdata (3.0.1-1build1) ...
162s Selecting previously unselected package r-cran-mass.
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162s Selecting previously unselected package r-cran-kernsmooth.
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162s Selecting previously unselected package r-cran-gplots.
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162s Selecting previously unselected package r-cran-purrr.
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162s Selecting previously unselected package r-cran-stringi.
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162s Selecting previously unselected package r-cran-stringr.
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162s Selecting previously unselected package r-cran-tidyr.
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162s Selecting previously unselected package r-cran-plotly.
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162s Selecting previously unselected package r-cran-plyr.
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162s Selecting previously unselected package r-cran-reshape2.
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162s Selecting previously unselected package r-cran-qap.
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162s Selecting previously unselected package r-cran-registry.
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162s Selecting previously unselected package r-cran-tsp.
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162s Selecting previously unselected package r-cran-permute.
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162s Selecting previously unselected package r-cran-lattice.
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162s Selecting previously unselected package r-cran-nlme.
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163s Setting up libjs-json (0~20221030+~1.0.8-1build1) ...
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165s Setting up r-base-core (4.5.2-1ubuntu2) ...
165s Creating config file /etc/R/Renviron with new version
165s Setting up r-cran-crayon (1.5.3-1) ...
165s Setting up r-cran-labeling (0.4.3-1) ...
165s Setting up r-cran-sourcetools (0.1.7-1-1) ...
165s Setting up r-cran-lattice (0.22-7-1) ...
165s Setting up r-cran-ps (1.9.0-1) ...
165s Setting up r-cran-nlme (3.1.168-1) ...
165s Setting up r-cran-farver (2.1.2-1) ...
165s Setting up r-cran-viridislite (0.4.3-1) ...
165s Setting up r-cran-cluster (2.1.8.2-1) ...
165s Setting up r-cran-lazyeval (0.2.2-1build2) ...
165s Setting up r-cran-commonmark (1.9.5-1) ...
165s Setting up r-cran-r6 (2.6.1-1) ...
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165s Setting up r-cran-ca (0.71.1-2build2) ...
165s Setting up r-cran-magrittr (2.0.3-1) ...
165s Setting up r-cran-rappdirs (0.3.3-1build1) ...
165s Setting up r-cran-registry (0.5-1-2build2) ...
165s Setting up r-cran-littler (0.3.22-1) ...
165s Setting up r-cran-permute (0.9-8-1) ...
165s Setting up r-cran-fs (1.6.5+dfsg-1) ...
165s Setting up r-cran-rcpp (1.1.0-1) ...
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165s Setting up r-cran-codetools (0.2-20-1build1) ...
165s Setting up r-cran-brio (1.1.5-1) ...
165s Setting up r-cran-diffobj (0.3.5-1build1) ...
165s Setting up r-cran-rlang (1.1.5-3) ...
165s Setting up r-cran-assertthat (0.2.1-3) ...
165s Setting up r-cran-xfun (0.55+dfsg-1) ...
165s Setting up r-cran-sys (3.4.3-1) ...
165s Setting up r-cran-gclus (1.3.3-1) ...
165s Setting up r-cran-withr (3.0.2+dfsg-1) ...
165s Setting up r-cran-processx (3.8.6-1) ...
165s Setting up r-cran-mime (0.12-2) ...
165s Setting up r-cran-qap (0.1-2-1) ...
165s Setting up r-cran-praise (1.0.0-4build2) ...
165s Setting up r-cran-generics (0.1.4-1) ...
165s Setting up r-cran-base64enc (0.1-3-3build1) ...
165s Setting up r-cran-iterators (1.0.14-1build1) ...
165s Setting up r-cran-digest (0.6.39-1) ...
165s Setting up r-cran-yaml (2.3.10-1) ...
165s Setting up r-cran-evaluate (1.0.5-1) ...
165s Setting up r-cran-highr (0.11+dfsg-1) ...
165s Setting up r-cran-foreach (1.5.2-1build1) ...
165s Setting up r-cran-fansi (1.0.6-2) ...
165s Setting up r-cran-mass (7.3-65-1) ...
165s Setting up r-cran-gtools (3.9.5-1build1) ...
165s Setting up r-cran-data.table (1.17.0+dfsg-1) ...
165s Setting up r-cran-glue (1.8.0-1) ...
165s Setting up r-cran-xtable (1:1.8-4-2build1) ...
165s Setting up r-cran-cli (3.6.4-1) ...
165s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ...
165s Setting up r-cran-bitops (1.0-9-1) ...
165s Setting up r-cran-rprojroot (2.1.1-1) ...
165s Setting up r-cran-askpass (1.2.1-1) ...
165s Setting up r-cran-fastmap (1.2.0-1) ...
165s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
165s Setting up r-cran-pkgconfig (2.0.3-2build2) ...
165s Setting up r-cran-utf8 (1.2.4-1) ...
165s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
165s Setting up r-cran-stringi (1.8.4-1build2) ...
165s Setting up r-cran-rex (1.2.1-1build1) ...
165s Setting up r-cran-s7 (0.2.0-1) ...
165s Setting up r-cran-cpp11 (0.5.3-1) ...
165s Setting up r-cran-plyr (1.8.9-1) ...
165s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ...
165s Setting up r-cran-isoband (0.2.7-1) ...
165s Setting up r-cran-waldo (0.6.2-1) ...
165s Setting up r-cran-scales (1.4.0-1) ...
165s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
165s Setting up r-cran-later (1.4.1+dfsg-1) ...
165s Setting up r-cran-matrix (1.7-4-1) ...
165s Setting up r-cran-htmltools (0.5.8.1-1) ...
165s Setting up r-cran-tinytex (0.58-1) ...
165s Setting up r-cran-kernsmooth (2.23-26-1build1) ...
165s Setting up r-cran-knitr (1.51+dfsg-1) ...
165s Setting up r-cran-mgcv (1.9-4-1) ...
165s Setting up r-cran-cachem (1.1.0-1) ...
165s Setting up r-cran-sass (0.4.9+dfsg-1) ...
165s Setting up r-cran-catools (1.18.3-1) ...
165s Setting up r-cran-tsp (1.2-4-1) ...
165s Setting up r-cran-gdata (3.0.1-1build1) ...
165s Setting up r-cran-vctrs (0.6.5-1) ...
165s Setting up r-cran-pillar (1.11.1+dfsg-1) ...
165s Setting up r-cran-openssl (2.3.2+dfsg-1) ...
165s Setting up r-cran-stringr (1.5.1-1) ...
165s Setting up r-cran-callr (3.7.6-1) ...
165s Setting up r-cran-ggplot2 (4.0.2+dfsg-1) ...
165s Setting up r-cran-desc (1.4.3-1) ...
165s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
165s Setting up r-cran-fontawesome (0.5.3-1) ...
165s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ...
165s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
165s Setting up r-cran-reshape2 (1.4.4-2build2) ...
165s Setting up r-cran-httr (1.4.7+dfsg-1) ...
165s Setting up r-cran-gridextra (2.3-3build2) ...
165s Setting up r-cran-memoise (2.0.1-1build1) ...
165s Setting up r-cran-covr (3.6.4+dfsg-1) ...
165s Setting up r-cran-promises (1.3.2+dfsg-1) ...
165s Setting up r-cran-purrr (1.0.4-1) ...
165s Setting up r-cran-vegan (2.6-10+dfsg-3) ...
165s Setting up r-cran-pkgbuild (1.4.8-1) ...
165s Setting up r-cran-seriation (1.5.7-1) ...
165s Setting up r-cran-dplyr (1.1.4-4) ...
165s Setting up r-cran-gplots (3.3.0-1) ...
165s Setting up r-cran-pkgload (1.4.1-1) ...
165s Setting up r-cran-webshot (0.5.5-1) ...
165s Setting up r-cran-egg (0.4.5-3build2) ...
165s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
165s Setting up r-cran-viridis (0.6.5-1) ...
165s Setting up r-cran-testthat (3.2.3-1) ...
165s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
165s Setting up r-cran-tidyr (1.3.1-1) ...
165s Setting up r-cran-dendextend (1.19.1+dfsg-1) ...
165s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
165s Setting up r-cran-shinyjs (2.1.0-1build1) ...
165s Setting up r-cran-miniui (0.1.2-1) ...
165s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
165s Setting up r-cran-crosstalk (1.2.2+dfsg-1) ...
165s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
165s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ...
165s Setting up r-cran-plotly (4.10.4+dfsg-4) ...
165s Setting up r-cran-heatmaply (1.6.0+dfsg-1) ...
165s Processing triggers for libc-bin (2.42-2ubuntu4) ...
165s Processing triggers for man-db (2.13.1-1build1) ...
166s Processing triggers for install-info (7.2-5) ...
167s autopkgtest [05:25:10]: test run-unit-test: [-----------------------
167s BEGIN TEST testthat.R
167s 
167s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
167s Copyright (C) 2025 The R Foundation for Statistical Computing
167s Platform: x86_64-pc-linux-gnu
167s 
167s R is free software and comes with ABSOLUTELY NO WARRANTY.
167s You are welcome to redistribute it under certain conditions.
167s Type 'license()' or 'licence()' for distribution details.
167s 
167s R is a collaborative project with many contributors.
167s Type 'contributors()' for more information and
167s 'citation()' on how to cite R or R packages in publications.
167s 
167s Type 'demo()' for some demos, 'help()' for on-line help, or
167s 'help.start()' for an HTML browser interface to help.
167s Type 'q()' to quit R.
167s 
167s > library(testthat)
167s > library(heatmaply)
167s Loading required package: plotly
167s Loading required package: ggplot2
168s 
168s Attaching package: 'plotly'
168s 
168s The following object is masked from 'package:ggplot2':
168s 
168s     last_plot
168s 
168s The following object is masked from 'package:stats':
168s 
168s     filter
168s 
168s The following object is masked from 'package:graphics':
168s 
168s     layout
168s 
168s Loading required package: viridis
168s Loading required package: viridisLite
168s 
168s ======================
168s Welcome to heatmaply version 1.6.0
168s 
168s Type citation('heatmaply') for how to cite the package.
168s Type ?heatmaply for the main documentation.
168s 
168s The github page is: https://github.com/talgalili/heatmaply/
168s Please submit your suggestions and bug-reports at: https://github.com/talgalili/heatmaply/issues
168s You may ask questions at stackoverflow, use the r and heatmaply tags: 
168s 	 https://stackoverflow.com/questions/tagged/heatmaply
168s ======================
168s 
168s > 
168s > test_check("heatmaply")
211s [ FAIL 58 | WARN 0 | SKIP 0 | PASS 193 ]
211s 
211s == Failed tests ================================================================
212s -- Error ('test_heatmaply.R:6:7'): heatmaply mtcars (both dend) ----------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, row_dend_left = bool, plot_method = plot_method) at test_heatmaply.R:6:7
212s  2. +-heatmaply:::heatmaply.default(mtcars, row_dend_left = bool, plot_method = plot_method)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:15:7'): heatmaply mtcars (no dend) -----------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:15:7
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:24:7'): heatmaply mtcars (coldend only) ------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:24:7
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:33:7'): heatmaply mtcars (rowdend only) ------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:33:7
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:43:7'): heatmaply mtcars (rscols, both dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:43:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:53:7'): heatmaply mtcars (rscols, row dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:53:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:64:7'): heatmaply mtcars (rscols, row dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:64:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:75:7'): heatmaply mtcars (rscols, no dends) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:75:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:85:7'): heatmaply mtcars (cscols, both dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:85:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:95:7'): heatmaply mtcars (cscols, col dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:95:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:106:7'): heatmaply mtcars (cscols, row dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:106:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:117:7'): heatmaply mtcars (cscols, no dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:117:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:128:7'): heatmaply mtcars (rcscols, both dend) -----
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:128:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:139:7'): heatmaply mtcars (rcscols, col dend) ------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:139:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:151:7'): heatmaply mtcars (rcscols, row dend) ------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:151:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:163:7'): heatmaply mtcars (rcscols, no dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:163:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:6:7'): heatmaply mtcars (both dend) ----------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, row_dend_left = bool, plot_method = plot_method) at test_heatmaply.R:6:7
212s  2. +-heatmaply:::heatmaply.default(mtcars, row_dend_left = bool, plot_method = plot_method)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:15:7'): heatmaply mtcars (no dend) -----------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:15:7
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:24:7'): heatmaply mtcars (coldend only) ------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:24:7
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:33:7'): heatmaply mtcars (rowdend only) ------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:33:7
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply.R:43:7'): heatmaply mtcars (rscols, both dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:43:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:53:7'): heatmaply mtcars (rscols, row dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:53:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:64:7'): heatmaply mtcars (rscols, row dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:64:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:75:7'): heatmaply mtcars (rscols, no dends) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:75:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:85:7'): heatmaply mtcars (cscols, both dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:85:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:95:7'): heatmaply mtcars (cscols, col dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:95:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:106:7'): heatmaply mtcars (cscols, row dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:106:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:117:7'): heatmaply mtcars (cscols, no dend) --------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:117:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:128:7'): heatmaply mtcars (rcscols, both dend) -----
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:128:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:139:7'): heatmaply mtcars (rcscols, col dend) ------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:139:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:151:7'): heatmaply mtcars (rcscols, row dend) ------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:151:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply.R:163:7'): heatmaply mtcars (rcscols, no dend) -------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply.R:163:7
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pc, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pc, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply_misc.R:15:3'): node argument works -------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply_misc.R:15:3
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:26:3'): non-numerics moved to row_side_colors --
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, row_side_colors = mtcars[, 1:2]) at test_heatmaply_misc.R:26:3
212s  2. \-heatmaply:::heatmaply.default(...)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply_misc.R:33:3'): colors as fun -------------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, colors = RdBu) at test_heatmaply_misc.R:33:3
212s  2. +-heatmaply:::heatmaply.default(mtcars, colors = RdBu)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:39:5'): label format fun ----------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply_misc.R:39:5
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:56:3'): heatmaply on matrix, and cexRow/Col ---
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, cexRow = 5, cexCol = 5) at test_heatmaply_misc.R:56:3
212s  2. +-heatmaply:::heatmaply.default(mtcars, cexRow = 5, cexCol = 5)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:63:3'): grid_color and hide_colorbar ----------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(...) at test_heatmaply_misc.R:63:3
212s  2. +-heatmaply:::heatmaply.default(...)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:76:3'): SideColors ----------------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, RowSideColors = rs) at test_heatmaply_misc.R:76:3
212s  2. \-heatmaply:::heatmaply.default(mtcars, RowSideColors = rs)
212s  3.   +-heatmaply::heatmaply(...)
212s  4.   \-heatmaply:::heatmaply.heatmapr(...)
212s  5.     +-plotly::ggplotly(pr, source = plotly_source)
212s  6.     \-plotly:::ggplotly.ggplot(pr, source = plotly_source)
212s  7.       \-plotly::gg2list(...)
212s -- Error ('test_heatmaply_misc.R:83:3'): limits --------------------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(t(mtcars), limits = range(as.matrix(mtcars))) at test_heatmaply_misc.R:83:3
212s  2. +-heatmaply:::heatmaply.default(t(mtcars), limits = range(as.matrix(mtcars)))
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:92:3'): cellnote ------------------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, draw_cellnote = TRUE) at test_heatmaply_misc.R:92:3
212s  2. +-heatmaply:::heatmaply.default(mtcars, draw_cellnote = TRUE)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:97:3'): showticklabels ------------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s     x
212s  1. +-heatmaply::heatmaply(mtcars, showticklabels = TRUE) at test_heatmaply_misc.R:97:3
212s  2. +-heatmaply:::heatmaply.default(mtcars, showticklabels = TRUE)
212s  3. | +-heatmaply::heatmaply(...)
212s  4. | \-heatmaply:::heatmaply.heatmapr(...)
212s  5. |   +-... %>% layout(showlegend = FALSE)
212s  6. |   +-plotly::ggplotly(...)
212s  7. |   \-plotly:::ggplotly.ggplot(...)
212s  8. |     \-plotly::gg2list(...)
212s  9. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:122:5'): correlation arguments work -----------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s      x
212s   1. +-base::lapply(...) at test_heatmaply_misc.R:121:3
212s   2. | \-heatmaply (local) FUN(X[[i]], ...)
212s   3. |   +-testthat::expect_is(heatmaply(mtcars, distfun = method), "plotly") at test_heatmaply_misc.R:122:5
212s   4. |   | \-testthat::quasi_label(enquo(object), label, arg = "object")
212s   5. |   |   \-rlang::eval_bare(expr, quo_get_env(quo))
212s   6. |   +-heatmaply::heatmaply(mtcars, distfun = method)
212s   7. |   \-heatmaply:::heatmaply.default(mtcars, distfun = method)
212s   8. |     +-heatmaply::heatmaply(...)
212s   9. |     \-heatmaply:::heatmaply.heatmapr(...)
212s  10. |       +-... %>% layout(showlegend = FALSE)
212s  11. |       +-plotly::ggplotly(...)
212s  12. |       \-plotly:::ggplotly.ggplot(...)
212s  13. |         \-plotly::gg2list(...)
212s  14. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:129:3'): long_data works ----------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s      x
212s   1. +-testthat::expect_is(heatmaply(long_data = mdf), "plotly") at test_heatmaply_misc.R:129:3
212s   2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
212s   3. |   \-rlang::eval_bare(expr, quo_get_env(quo))
212s   4. +-heatmaply::heatmaply(long_data = mdf)
212s   5. +-heatmaply:::heatmaply.default(long_data = mdf)
212s   6. | +-heatmaply::heatmaply(...)
212s   7. | \-heatmaply:::heatmaply.heatmapr(...)
212s   8. |   +-... %>% layout(showlegend = FALSE)
212s   9. |   +-plotly::ggplotly(...)
212s  10. |   \-plotly:::ggplotly.ggplot(...)
212s  11. |     \-plotly::gg2list(...)
212s  12. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:139:3'): heatmaply_na works -------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s      x
212s   1. +-testthat::expect_is(heatmaply_na(m), "plotly") at test_heatmaply_misc.R:139:3
212s   2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
212s   3. |   \-rlang::eval_bare(expr, quo_get_env(quo))
212s   4. +-heatmaply::heatmaply_na(m)
212s   5. | +-heatmaply::heatmaply(...)
212s   6. | \-heatmaply:::heatmaply.default(...)
212s   7. |   +-heatmaply::heatmaply(...)
212s   8. |   \-heatmaply:::heatmaply.heatmapr(...)
212s   9. |     +-... %>% layout(showlegend = FALSE)
212s  10. |     +-plotly::ggplotly(...)
212s  11. |     \-plotly:::ggplotly.ggplot(...)
212s  12. |       \-plotly::gg2list(...)
212s  13. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:144:3'): heatmaply_cor works ------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s      x
212s   1. +-testthat::expect_is(heatmaply_cor(m), "plotly") at test_heatmaply_misc.R:144:3
212s   2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
212s   3. |   \-rlang::eval_bare(expr, quo_get_env(quo))
212s   4. +-heatmaply::heatmaply_cor(m)
212s   5. | +-heatmaply::heatmaply(x, limits = limits, colors = colors, ...)
212s   6. | \-heatmaply:::heatmaply.default(...)
212s   7. |   +-heatmaply::heatmaply(...)
212s   8. |   \-heatmaply:::heatmaply.heatmapr(...)
212s   9. |     +-... %>% layout(showlegend = FALSE)
212s  10. |     +-plotly::ggplotly(...)
212s  11. |     \-plotly:::ggplotly.ggplot(...)
212s  12. |       \-plotly::gg2list(...)
212s  13. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:149:3'): dengrogram=TRUE works ----------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s      x
212s   1. +-testthat::expect_is(heatmaply(mtcars, dendrogram = TRUE), "plotly") at test_heatmaply_misc.R:149:3
212s   2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
212s   3. |   \-rlang::eval_bare(expr, quo_get_env(quo))
212s   4. +-heatmaply::heatmaply(mtcars, dendrogram = TRUE)
212s   5. +-heatmaply:::heatmaply.default(mtcars, dendrogram = TRUE)
212s   6. | +-heatmaply::heatmaply(...)
212s   7. | \-heatmaply:::heatmaply.heatmapr(...)
212s   8. |   +-... %>% layout(showlegend = FALSE)
212s   9. |   +-plotly::ggplotly(...)
212s  10. |   \-plotly:::ggplotly.ggplot(...)
212s  11. |     \-plotly::gg2list(...)
212s  12. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:153:3'): limits warning -----------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s      x
212s   1. +-testthat::expect_warning(...) at test_heatmaply_misc.R:153:3
212s   2. | \-testthat:::quasi_capture(...)
212s   3. |   +-testthat (local) .capture(...)
212s   4. |   | \-base::withCallingHandlers(...)
212s   5. |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s   6. +-heatmaply::heatmaply(mtcars, limits = c(4, 5))
212s   7. +-heatmaply:::heatmaply.default(mtcars, limits = c(4, 5))
212s   8. | +-heatmaply::heatmaply(...)
212s   9. | \-heatmaply:::heatmaply.heatmapr(...)
212s  10. |   +-... %>% layout(showlegend = FALSE)
212s  11. |   +-plotly::ggplotly(...)
212s  12. |   \-plotly:::ggplotly.ggplot(...)
212s  13. |     \-plotly::gg2list(...)
212s  14. \-plotly::layout(., showlegend = FALSE)
212s -- Error ('test_heatmaply_misc.R:160:3'): grid_gap works -----------------------
212s <subscriptOutOfBoundsError/error/condition>
212s Error in `pm[[2]]`: subscript out of bounds
212s Backtrace:
212s      x
212s   1. +-testthat::expect_is(heatmaply(mtcars, grid_gap = 1), "plotly") at test_heatmaply_misc.R:160:3
212s   2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
212s   3. |   \-rlang::eval_bare(expr, quo_get_env(quo))
212s   4. +-heatmaply::heatmaply(mtcars, grid_gap = 1)
212s   5. +-heatmaply:::heatmaply.default(mtcars, grid_gap = 1)
212s   6. | +-heatmaply::heatmaply(...)
212s   7. | \-heatmaply:::heatmaply.heatmapr(...)
212s   8. |   +-... %>% layout(showlegend = FALSE)
212s   9. |   +-plotly::ggplotly(...)
212s  10. |   \-plotly:::ggplotly.ggplot(...)
212s  11. |     \-plotly::gg2list(...)
212s  12. \-plotly::layout(., showlegend = FALSE)
212s -- Failure ('test_heatmaply_misc.R:173:5'): custom_hovertext works -------------
212s `heatmaply(mtcars, plot_method = plot_method, custom_hovertext = mat)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s      x
212s   1. +-testthat::expect_error(...) at test_heatmaply_misc.R:173:5
212s   2. | \-testthat:::quasi_capture(...)
212s   3. |   +-testthat (local) .capture(...)
212s   4. |   | \-base::withCallingHandlers(...)
212s   5. |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s   6. +-heatmaply::heatmaply(mtcars, plot_method = plot_method, custom_hovertext = mat)
212s   7. +-heatmaply:::heatmaply.default(...)
212s   8. | +-heatmaply::heatmaply(...)
212s   9. | \-heatmaply:::heatmaply.heatmapr(...)
212s  10. |   +-... %>% layout(showlegend = FALSE)
212s  11. |   +-plotly::ggplotly(...)
212s  12. |   \-plotly:::ggplotly.ggplot(...)
212s  13. |     \-plotly::gg2list(...)
212s  14. \-plotly::layout(., showlegend = FALSE)
212s -- Failure ('test_heatmaply_misc.R:178:3'): hclust_method=NA works -------------
212s `heatmaply(mtcars, hclust_method = NA)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s      x
212s   1. +-testthat::expect_error(...) at test_heatmaply_misc.R:178:3
212s   2. | \-testthat:::quasi_capture(...)
212s   3. |   +-testthat (local) .capture(...)
212s   4. |   | \-base::withCallingHandlers(...)
212s   5. |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s   6. +-heatmaply::heatmaply(mtcars, hclust_method = NA)
212s   7. +-heatmaply:::heatmaply.default(mtcars, hclust_method = NA)
212s   8. | +-heatmaply::heatmaply(...)
212s   9. | \-heatmaply:::heatmaply.heatmapr(...)
212s  10. |   +-... %>% layout(showlegend = FALSE)
212s  11. |   +-plotly::ggplotly(...)
212s  12. |   \-plotly:::ggplotly.ggplot(...)
212s  13. |     \-plotly::gg2list(...)
212s  14. \-plotly::layout(., showlegend = FALSE)
212s -- Failure ('test_plots.R:14:3'): ggplot_heatmap works -------------------------
212s `ggplotly(g)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s     x
212s  1. \-heatmaply (local) expect_ggplotly(g) at test_plots.R:14:3
212s  2.   +-testthat::expect_error(ggplotly(g), NA) at test_plots.R:6:3
212s  3.   | \-testthat:::quasi_capture(...)
212s  4.   |   +-testthat (local) .capture(...)
212s  5.   |   | \-base::withCallingHandlers(...)
212s  6.   |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s  7.   +-plotly::ggplotly(g)
212s  8.   \-plotly:::ggplotly.ggplot(g)
212s  9.     \-plotly::gg2list(...)
212s -- Failure ('test_plots.R:17:3'): ggplot_heatmap works -------------------------
212s `ggplotly(g)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s     x
212s  1. \-heatmaply (local) expect_ggplotly(g) at test_plots.R:17:3
212s  2.   +-testthat::expect_error(ggplotly(g), NA) at test_plots.R:6:3
212s  3.   | \-testthat:::quasi_capture(...)
212s  4.   |   +-testthat (local) .capture(...)
212s  5.   |   | \-base::withCallingHandlers(...)
212s  6.   |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s  7.   +-plotly::ggplotly(g)
212s  8.   \-plotly:::ggplotly.ggplot(g)
212s  9.     \-plotly::gg2list(...)
212s -- Failure ('test_plots.R:23:3'): ggplot_heatmap works -------------------------
212s `ggplotly(g)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s     x
212s  1. \-heatmaply (local) expect_ggplotly(g) at test_plots.R:23:3
212s  2.   +-testthat::expect_error(ggplotly(g), NA) at test_plots.R:6:3
212s  3.   | \-testthat:::quasi_capture(...)
212s  4.   |   +-testthat (local) .capture(...)
212s  5.   |   | \-base::withCallingHandlers(...)
212s  6.   |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s  7.   +-plotly::ggplotly(g)
212s  8.   \-plotly:::ggplotly.ggplot(g)
212s  9.     \-plotly::gg2list(...)
212s -- Failure ('test_plots.R:46:3'): ggplot_side_color_plot works -----------------
212s `ggplotly(g)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s     x
212s  1. \-heatmaply (local) expect_ggplotly(g) at test_plots.R:46:3
212s  2.   +-testthat::expect_error(ggplotly(g), NA) at test_plots.R:6:3
212s  3.   | \-testthat:::quasi_capture(...)
212s  4.   |   +-testthat (local) .capture(...)
212s  5.   |   | \-base::withCallingHandlers(...)
212s  6.   |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s  7.   +-plotly::ggplotly(g)
212s  8.   \-plotly:::ggplotly.ggplot(g)
212s  9.     \-plotly::gg2list(...)
212s -- Failure ('test_plots.R:51:3'): ggplot_side_color_plot works -----------------
212s `ggplotly(g)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s     x
212s  1. \-heatmaply (local) expect_ggplotly(g) at test_plots.R:51:3
212s  2.   +-testthat::expect_error(ggplotly(g), NA) at test_plots.R:6:3
212s  3.   | \-testthat:::quasi_capture(...)
212s  4.   |   +-testthat (local) .capture(...)
212s  5.   |   | \-base::withCallingHandlers(...)
212s  6.   |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s  7.   +-plotly::ggplotly(g)
212s  8.   \-plotly:::ggplotly.ggplot(g)
212s  9.     \-plotly::gg2list(...)
212s -- Failure ('test_plots.R:73:3'): predict_colors works -------------------------
212s `ggplotly(g)` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s     x
212s  1. \-heatmaply (local) expect_ggplotly(g) at test_plots.R:73:3
212s  2.   +-testthat::expect_error(ggplotly(g), NA) at test_plots.R:6:3
212s  3.   | \-testthat:::quasi_capture(...)
212s  4.   |   +-testthat (local) .capture(...)
212s  5.   |   | \-base::withCallingHandlers(...)
212s  6.   |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s  7.   +-plotly::ggplotly(g)
212s  8.   \-plotly:::ggplotly.ggplot(g)
212s  9.     \-plotly::gg2list(...)
212s -- Failure ('test_plots.R:79:3'): predict_colors works -------------------------
212s `heatmaply:::predict_colors(ggplotly(g), plot_method = "ggplot")` threw an error.
212s Message: subscript out of bounds
212s Class:   subscriptOutOfBoundsError/error/condition
212s Backtrace:
212s     x
212s  1. +-testthat::expect_error(...) at test_plots.R:79:3
212s  2. | \-testthat:::quasi_capture(...)
212s  3. |   +-testthat (local) .capture(...)
212s  4. |   | \-base::withCallingHandlers(...)
212s  5. |   \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
212s  6. +-heatmaply:::predict_colors(ggplotly(g), plot_method = "ggplot")
212s  7. +-plotly::ggplotly(g)
212s  8. \-plotly:::ggplotly.ggplot(g)
212s  9.   \-plotly::gg2list(...)
212s 
212s [ FAIL 58 | WARN 0 | SKIP 0 | PASS 193 ]
213s Error: Test failures
213s Execution halted
213s autopkgtest [05:25:56]: test run-unit-test: -----------------------]
213s autopkgtest [05:25:56]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
213s run-unit-test        FAIL non-zero exit status 1
214s autopkgtest [05:25:57]: test pkg-r-autopkgtest: preparing testbed
214s Reading package lists...
214s Building dependency tree...
214s Reading state information...
214s Solving dependencies...
214s The following NEW packages will be installed:
214s   build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu
214s   dctrl-tools g++ g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc
214s   gcc-15 gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15
214s   gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libasan8
214s   libblas-dev libbz2-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev
214s   libdeflate-dev libgcc-15-dev libgfortran-15-dev libhwasan0 libicu-dev
214s   libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev
214s   liblsan0 liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0
214s   libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libquadmath0
214s   libreadline-dev libstdc++-15-dev libtirpc-dev libtsan2 libubsan1 libzstd-dev
214s   linux-libc-dev pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto
214s   zlib1g-dev
214s 0 upgraded, 61 newly installed, 0 to remove and 0 not upgraded.
214s Need to get 112 MB of archives.
214s After this operation, 402 MB of additional disk space will be used.
214s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
214s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
215s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
215s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
215s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
215s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
215s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
215s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
216s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
216s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
216s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
216s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
216s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
216s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
217s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
217s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
217s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
217s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
217s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
217s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
217s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
218s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
218s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
218s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
218s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
218s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
218s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
218s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
218s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
218s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
218s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
218s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
218s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
218s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
218s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
218s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
219s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
219s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
219s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
219s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
219s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
219s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
219s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
219s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
219s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
219s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
219s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
219s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
219s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
219s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
219s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
219s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
219s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
219s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
219s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
219s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
219s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
219s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
219s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
219s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
219s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
219s Fetched 112 MB in 5s (22.8 MB/s)
219s Selecting previously unselected package libc-dev-bin.
219s (Reading database ... 
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(Reading database ... 147026 files and directories currently installed.)
219s Preparing to unpack .../00-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
219s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
219s Selecting previously unselected package linux-libc-dev:amd64.
219s Preparing to unpack .../01-linux-libc-dev_6.19.0-3.3_amd64.deb ...
219s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
219s Selecting previously unselected package libcrypt-dev:amd64.
219s Preparing to unpack .../02-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
219s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
219s Selecting previously unselected package rpcsvc-proto.
219s Preparing to unpack .../03-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
219s Unpacking rpcsvc-proto (1.4.3-1build1) ...
219s Selecting previously unselected package libc6-dev:amd64.
219s Preparing to unpack .../04-libc6-dev_2.42-2ubuntu4_amd64.deb ...
219s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
219s Selecting previously unselected package libisl23:amd64.
219s Preparing to unpack .../05-libisl23_0.27-1build1_amd64.deb ...
219s Unpacking libisl23:amd64 (0.27-1build1) ...
219s Selecting previously unselected package libmpc3:amd64.
219s Preparing to unpack .../06-libmpc3_1.3.1-2_amd64.deb ...
219s Unpacking libmpc3:amd64 (1.3.1-2) ...
219s Selecting previously unselected package cpp-15-x86-64-linux-gnu.
219s Preparing to unpack .../07-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
219s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
220s Selecting previously unselected package cpp-15.
220s Preparing to unpack .../08-cpp-15_15.2.0-12ubuntu1_amd64.deb ...
220s Unpacking cpp-15 (15.2.0-12ubuntu1) ...
220s Selecting previously unselected package cpp-x86-64-linux-gnu.
220s Preparing to unpack .../09-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
220s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
220s Selecting previously unselected package cpp.
220s Preparing to unpack .../10-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ...
220s Unpacking cpp (4:15.2.0-4ubuntu1) ...
220s Selecting previously unselected package libcc1-0:amd64.
220s Preparing to unpack .../11-libcc1-0_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package libitm1:amd64.
220s Preparing to unpack .../12-libitm1_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package libasan8:amd64.
220s Preparing to unpack .../13-libasan8_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package liblsan0:amd64.
220s Preparing to unpack .../14-liblsan0_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package libtsan2:amd64.
220s Preparing to unpack .../15-libtsan2_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package libubsan1:amd64.
220s Preparing to unpack .../16-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package libhwasan0:amd64.
220s Preparing to unpack .../17-libhwasan0_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package libquadmath0:amd64.
220s Preparing to unpack .../18-libquadmath0_16-20260208-1ubuntu1_amd64.deb ...
220s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ...
220s Selecting previously unselected package libgcc-15-dev:amd64.
220s Preparing to unpack .../19-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ...
220s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
220s Selecting previously unselected package gcc-15-x86-64-linux-gnu.
220s Preparing to unpack .../20-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
220s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
220s Selecting previously unselected package gcc-15.
220s Preparing to unpack .../21-gcc-15_15.2.0-12ubuntu1_amd64.deb ...
220s Unpacking gcc-15 (15.2.0-12ubuntu1) ...
220s Selecting previously unselected package gcc-x86-64-linux-gnu.
220s Preparing to unpack .../22-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
220s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
220s Selecting previously unselected package gcc.
220s Preparing to unpack .../23-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ...
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223s autopkgtest [05:26:06]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
223s autopkgtest [05:26:06]: test pkg-r-autopkgtest: [-----------------------
223s Test: Try to load the R library heatmaply
223s 
223s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
223s Copyright (C) 2025 The R Foundation for Statistical Computing
223s Platform: x86_64-pc-linux-gnu
223s 
223s R is free software and comes with ABSOLUTELY NO WARRANTY.
223s You are welcome to redistribute it under certain conditions.
223s Type 'license()' or 'licence()' for distribution details.
223s 
223s R is a collaborative project with many contributors.
223s Type 'contributors()' for more information and
223s 'citation()' on how to cite R or R packages in publications.
223s 
223s Type 'demo()' for some demos, 'help()' for on-line help, or
223s 'help.start()' for an HTML browser interface to help.
223s Type 'q()' to quit R.
223s 
223s Loading required package: plotly
223s Loading required package: ggplot2
223s > library('heatmaply')
224s 
224s Attaching package: ‘plotly’
224s 
224s The following object is masked from ‘package:ggplot2’:
224s 
224s     last_plot
224s 
224s The following object is masked from ‘package:stats’:
224s 
224s     filter
224s 
224s The following object is masked from ‘package:graphics’:
224s 
224s     layout
224s 
224s Loading required package: viridis
224s Loading required package: viridisLite
224s 
224s ======================
224s Welcome to heatmaply version 1.6.0
224s 
224s Type citation('heatmaply') for how to cite the package.
224s Type ?heatmaply for the main documentation.
224s 
224s The github page is: https://github.com/talgalili/heatmaply/
224s Please submit your suggestions and bug-reports at: https://github.com/talgalili/heatmaply/issues
224s You may ask questions at stackoverflow, use the r and heatmaply tags: 
224s 	 https://stackoverflow.com/questions/tagged/heatmaply
224s ======================
224s 
224s > 
224s autopkgtest [05:26:07]: test pkg-r-autopkgtest: -----------------------]
225s pkg-r-autopkgtest    PASS
225s autopkgtest [05:26:08]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
225s autopkgtest [05:26:08]: @@@@@@@@@@@@@@@@@@@@ summary
225s run-unit-test        FAIL non-zero exit status 1
225s pkg-r-autopkgtest    PASS