0s autopkgtest [01:49:25]: starting date and time: 2026-02-10 01:49:25+0000
  0s autopkgtest [01:49:25]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [01:49:25]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.h8u9vad7/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lattice --apt-upgrade r-cran-aer --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lattice/0.22-9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-9.secgroup --name adt-resolute-amd64-r-cran-aer-20260210-014925-juju-7f2275-prod-proposed-migration-environment-15-135ce5e8-41bd-49af-aff1-9f527370f24a --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  4s Creating nova instance adt-resolute-amd64-r-cran-aer-20260210-014925-juju-7f2275-prod-proposed-migration-environment-15-135ce5e8-41bd-49af-aff1-9f527370f24a from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 72s autopkgtest [01:50:37]: testbed dpkg architecture: amd64
 73s autopkgtest [01:50:38]: testbed apt version: 3.1.14
 73s autopkgtest [01:50:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 73s autopkgtest [01:50:38]: testbed release detected to be: None
 73s autopkgtest [01:50:38]: updating testbed package index (apt update)
 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 74s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 74s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 74s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB]
 74s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1637 kB]
 74s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [173 kB]
 74s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [201 kB]
 74s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [253 kB]
 74s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5996 B]
 74s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [316 B]
 74s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [639 kB]
 74s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1584 kB]
 74s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [33.3 kB]
 74s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [25.2 kB]
 74s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [4320 B]
 74s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 75s Fetched 4710 kB in 1s (5570 kB/s)
 76s Reading package lists...
 77s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 77s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 77s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 77s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 77s Reading package lists...
 77s Reading package lists...
 77s Building dependency tree...
 77s Reading state information...
 78s Calculating upgrade...
 78s The following package was automatically installed and is no longer required:
 78s   libpython3.13
 78s Use 'sudo apt autoremove' to remove it.
 78s The following NEW packages will be installed:
 78s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 78s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 78s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 78s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 78s The following packages will be upgraded:
 78s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 78s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 78s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 78s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 78s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0
 78s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 78s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 78s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 78s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 78s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 78s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 78s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 78s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 78s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 78s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 78s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 78s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 78s Need to get 237 MB of archives.
 78s After this operation, 339 MB of additional disk space will be used.
 78s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 78s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 78s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 78s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 78s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 78s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 78s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 78s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 78s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 78s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 78s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 78s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 78s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 78s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 78s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 78s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 78s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 78s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 78s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 78s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 78s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 78s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 78s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 78s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 78s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 78s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 78s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 78s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 78s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 78s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 78s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 78s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 78s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 78s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 78s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 78s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 78s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 78s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 78s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 78s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 78s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 78s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 78s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 79s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 79s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 79s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 79s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 79s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 79s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 79s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 79s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 79s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 79s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 79s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 79s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 79s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 79s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 79s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 79s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 79s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 79s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 79s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 79s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 79s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 79s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 79s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 79s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 79s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 79s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 79s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 79s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 79s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 79s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 79s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 79s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 79s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 79s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 79s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 79s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 79s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 79s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 79s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 83s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 83s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 83s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 83s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 83s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 83s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 83s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 83s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 83s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 84s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 84s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 84s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 84s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 84s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 84s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 84s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 84s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 84s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 84s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 84s Fetched 237 MB in 6s (41.8 MB/s)
 84s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 84s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 84s Setting up debianutils (5.23.2build1) ...
 84s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 84s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
 84s Setting up dash (0.5.12-12ubuntu3) ...
 84s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
 84s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
 84s Setting up findutils (4.10.0-3build2) ...
 84s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
 84s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
 84s Setting up sed (4.9-2build3) ...
 84s (Reading database ... 
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(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
 85s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
 85s Setting up tar (1.35+dfsg-3.1build2) ...
 85s (Reading database ... 
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 95s Setting up libglib2.0-data (2.87.2-2) ...
 95s Setting up pollinate (4.33-4ubuntu5) ...
106s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
106s Setting up libwrap0:amd64 (7.6.q-36build2) ...
106s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
108s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
108s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
108s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
108s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
108s Setting up patch (2.8-2build1) ...
108s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
108s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
108s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
108s Setting up lsof (4.99.4+dfsg-2build2) ...
108s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
108s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
108s Setting up dracut-install (109-11ubuntu1) ...
108s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
108s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
108s Setting up pnp.ids (0.394-1build1) ...
108s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
108s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
108s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
108s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
108s Setting up mawk (1.3.4.20260129-1) ...
108s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
108s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
108s Setting up linux-image-virtual (6.19.0-3.3) ...
108s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
108s Setting up libbsd0:amd64 (0.12.2-2build2) ...
108s Setting up libdrm-common (2.4.131-1) ...
108s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
108s Setting up dbus-bin (1.16.2-2ubuntu3) ...
108s Setting up libonig5:amd64 (6.9.10-1build1) ...
108s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
108s Setting up ethtool (1:6.15-3build1) ...
108s Setting up python3-referencing (0.36.2-1ubuntu2) ...
108s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
108s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
108s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
108s Setting up tcpdump (4.99.5-2ubuntu3) ...
108s Setting up linux-image-generic (6.19.0-3.3) ...
108s Setting up wget (1.25.0-2ubuntu4) ...
108s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
108s Setting up iptables (1.8.11-2ubuntu3) ...
108s Setting up iproute2 (6.18.0-1ubuntu1) ...
108s Setting up linux-headers-generic (6.19.0-3.3) ...
108s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
108s Setting up hwdata (0.394-1build1) ...
108s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
108s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
108s No schema files found: doing nothing.
108s Setting up dbus (1.16.2-2ubuntu3) ...
108s A reboot is required to replace the running dbus-daemon.
108s Please reboot the system when convenient.
108s Setting up shared-mime-info (2.4-5build3) ...
109s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
109s Setting up pciutils (1:3.14.0-1build2) ...
109s Setting up python3-markdown-it (3.0.0-3build1) ...
110s Setting up libdrm2:amd64 (2.4.131-1) ...
110s Setting up libpython3.14:amd64 (3.14.2-1) ...
110s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
110s Setting up linux-tools-common (6.19.0-3.3) ...
110s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
110s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
110s Setting up apt (3.1.15) ...
110s Setting up linux-headers-virtual (6.19.0-3.3) ...
110s Setting up linux-generic (6.19.0-3.3) ...
110s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
110s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
110s Setting up ubuntu-standard (1.564) ...
110s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
110s Setting up linux-virtual (6.19.0-3.3) ...
110s Setting up linux-perf (6.19.0-3.3) ...
110s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
110s Processing triggers for debianutils (5.23.2build1) ...
110s Processing triggers for install-info (7.2-5) ...
110s Processing triggers for initramfs-tools (0.150ubuntu7) ...
110s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
116s Processing triggers for libc-bin (2.42-2ubuntu4) ...
116s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
116s /etc/kernel/postinst.d/initramfs-tools:
116s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
120s /etc/kernel/postinst.d/zz-update-grub:
120s Sourcing file `/etc/default/grub'
120s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
120s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
120s Generating grub configuration file ...
120s Found linux image: /boot/vmlinuz-6.19.0-3-generic
120s Found initrd image: /boot/initrd.img-6.19.0-3-generic
120s Found linux image: /boot/vmlinuz-6.18.0-9-generic
121s Found initrd image: /boot/initrd.img-6.18.0-9-generic
121s Warning: os-prober will not be executed to detect other bootable partitions.
121s Systems on them will not be added to the GRUB boot configuration.
121s Check GRUB_DISABLE_OS_PROBER documentation entry.
121s Adding boot menu entry for UEFI Firmware Settings ...
121s done
121s autopkgtest [01:51:26]: upgrading testbed (apt dist-upgrade and autopurge)
122s Reading package lists...
122s Building dependency tree...
122s Reading state information...
122s Calculating upgrade...
122s The following package was automatically installed and is no longer required:
122s   libpython3.13
122s Use 'sudo apt autoremove' to remove it.
122s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
122s Reading package lists...
122s Building dependency tree...
122s Reading state information...
122s Solving dependencies...
122s The following packages will be REMOVED:
122s   libpython3.13*
123s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
123s After this operation, 7599 kB disk space will be freed.
123s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 25%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
123s Removing libpython3.13:amd64 (3.13.11-1) ...
123s Processing triggers for libc-bin (2.42-2ubuntu4) ...
123s autopkgtest [01:51:28]: rebooting testbed after setup commands that affected boot
153s autopkgtest [01:51:58]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
155s autopkgtest [01:52:00]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-aer
157s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-cran-aer 1.2-15-1 (dsc) [2550 B]
157s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-cran-aer 1.2-15-1 (tar) [2242 kB]
157s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-cran-aer 1.2-15-1 (diff) [7860 B]
157s gpgv: Signature made Thu Dec 11 04:31:15 2025 UTC
157s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
157s gpgv:                issuer "plessy@debian.org"
157s gpgv: Can't check signature: No public key
157s dpkg-source: warning: cannot verify inline signature for ./r-cran-aer_1.2-15-1.dsc: no acceptable signature found
157s autopkgtest [01:52:02]: testing package r-cran-aer version 1.2-15-1
157s autopkgtest [01:52:02]: build not needed
160s autopkgtest [01:52:05]: test run-unit-test: preparing testbed
161s Reading package lists...
161s Building dependency tree...
161s Reading state information...
161s Solving dependencies...
161s The following NEW packages will be installed:
161s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
161s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax
161s   javascript-common libblas3 libcairo2 libdatrie1 libdeflate0 libdrm-intel1
161s   libfontconfig1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglu1-mesa
161s   libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libice6
161s   libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3
161s   libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables
161s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax
161s   libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify
161s   libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 liblerc4
161s   liblua5.4-0 libnlopt0 libopengl0 libpango-1.0-0 libpangocairo-1.0-0
161s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpciaccess0 libpixman-1-0
161s   libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6
161s   libvulkan1 libwebp7 libx11-xcb1 libxcb-dri3-0 libxcb-glx0 libxcb-present0
161s   libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxft2
161s   libxrender1 libxshmfence1 libxss1 libxt6t64 libxxf86vm1 mesa-libgallium
161s   node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data
161s   r-base-core r-cran-abind r-cran-aer r-cran-backports r-cran-base64enc
161s   r-cran-bdsmatrix r-cran-bitops r-cran-boot r-cran-broom r-cran-bslib
161s   r-cran-cachem r-cran-car r-cran-cardata r-cran-caret r-cran-catools
161s   r-cran-class r-cran-cli r-cran-clock r-cran-codetools r-cran-collapse
161s   r-cran-colorspace r-cran-commonmark r-cran-conquer r-cran-cowplot
161s   r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-cvar
161s   r-cran-data.table r-cran-dbi r-cran-deriv r-cran-diagram r-cran-digest
161s   r-cran-doby r-cran-dplyr r-cran-dynlm r-cran-e1071 r-cran-effects
161s   r-cran-estimability r-cran-evaluate r-cran-fansi r-cran-farver
161s   r-cran-fastica r-cran-fastmap r-cran-fbasics r-cran-fgarch
161s   r-cran-fontawesome r-cran-foreach r-cran-forecast r-cran-foreign
161s   r-cran-formula r-cran-fracdiff r-cran-fs r-cran-future r-cran-future.apply
161s   r-cran-gbutils r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-globals
161s   r-cran-glue r-cran-gower r-cran-gplots r-cran-gss r-cran-gtable
161s   r-cran-gtools r-cran-hardhat r-cran-highr r-cran-htmltools
161s   r-cran-htmlwidgets r-cran-httpuv r-cran-insight r-cran-ipred r-cran-isoband
161s   r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth
161s   r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice r-cran-lava
161s   r-cran-lazyeval r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lme4
161s   r-cran-lmtest r-cran-lubridate r-cran-magrittr r-cran-mass r-cran-matrix
161s   r-cran-matrixmodels r-cran-matrixstats r-cran-maxlik r-cran-memoise
161s   r-cran-mgcv r-cran-microbenchmark r-cran-mime r-cran-minqa r-cran-misctools
161s   r-cran-mitools r-cran-modelmetrics r-cran-modelr r-cran-nlme r-cran-nloptr
161s   r-cran-nnet r-cran-numderiv r-cran-parallelly r-cran-pbkrtest r-cran-pillar
161s   r-cran-pkgconfig r-cran-pkgkitten r-cran-plm r-cran-plyr r-cran-proc
161s   r-cran-prodlim r-cran-progressr r-cran-promises r-cran-proxy r-cran-pscl
161s   r-cran-purrr r-cran-quadprog r-cran-quantmod r-cran-quantreg r-cran-r6
161s   r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp
161s   r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rdpack r-cran-recipes
161s   r-cran-reformulas r-cran-reshape2 r-cran-rgl r-cran-rlang r-cran-rmarkdown
161s   r-cran-rocr r-cran-rpart r-cran-sandwich r-cran-sass r-cran-scales
161s   r-cran-scatterplot3d r-cran-shape r-cran-shiny r-cran-sourcetools
161s   r-cran-sparsem r-cran-sparsevctrs r-cran-spatial r-cran-squarem
161s   r-cran-stabledist r-cran-statmod r-cran-stringi r-cran-stringr
161s   r-cran-strucchange r-cran-survey r-cran-survival r-cran-systemfit
161s   r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange
161s   r-cran-timedate r-cran-timeseries r-cran-tinytex r-cran-tseries r-cran-ttr
161s   r-cran-tzdb r-cran-urca r-cran-utf8 r-cran-vctrs r-cran-viridislite
161s   r-cran-withr r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo
161s   unzip x11-common xdg-utils zip
161s 0 upgraded, 274 newly installed, 0 to remove and 0 not upgraded.
161s Need to get 253 MB of archives.
161s After this operation, 680 MB of additional disk space will be used.
161s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
161s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
161s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
161s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
161s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
161s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
161s Get:7 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
161s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
161s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
161s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
161s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
161s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
161s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
161s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
161s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
161s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
161s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
161s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu3 [19.0 kB]
161s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-intel1 amd64 2.4.131-1 [66.7 kB]
161s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libx11-xcb1 amd64 2:1.8.12-1build1 [8044 B]
161s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-dri3-0 amd64 1.17.0-2ubuntu1 [7540 B]
161s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-present0 amd64 1.17.0-2ubuntu1 [6112 B]
161s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-randr0 amd64 1.17.0-2ubuntu1 [17.9 kB]
161s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-sync1 amd64 1.17.0-2ubuntu1 [9348 B]
161s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-xfixes0 amd64 1.17.0-2ubuntu1 [10.2 kB]
161s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libxshmfence1 amd64 1.3.3-1build1 [5284 B]
161s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 mesa-libgallium amd64 25.3.3-1ubuntu1 [11.1 MB]
162s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libgbm1 amd64 25.3.3-1ubuntu1 [34.0 kB]
162s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
162s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libvulkan1 amd64 1.4.335.0-1 [158 kB]
162s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1-mesa-dri amd64 25.3.3-1ubuntu1 [37.5 kB]
162s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-glx0 amd64 1.17.0-2ubuntu1 [24.7 kB]
162s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libxxf86vm1 amd64 1:1.1.4-2 [10.6 kB]
162s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx-mesa0 amd64 25.3.3-1ubuntu1 [110 kB]
162s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
162s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
162s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
162s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
162s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
162s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
162s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
162s Get:42 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
162s Get:43 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
162s Get:44 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
162s Get:45 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
162s Get:46 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
162s Get:47 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
162s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
162s Get:49 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
162s Get:50 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
162s Get:51 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
162s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
162s Get:53 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
162s Get:54 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
162s Get:55 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
162s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
162s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
162s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
162s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
162s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
162s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
162s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
162s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
162s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
162s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
162s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
162s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
162s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
162s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
162s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
162s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
162s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
162s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
162s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
162s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
162s Get:76 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
162s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
162s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
162s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
162s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
162s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
162s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
162s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
162s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
163s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
163s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cardata all 3.0.6-1 [1687 kB]
163s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formula all 1.2-5-1 [158 kB]
163s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
163s Get:89 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-lattice amd64 0.22-9-1 [1399 kB]
163s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
163s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
163s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB]
163s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB]
163s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-boot all 1.3-32-1 [636 kB]
163s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
163s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
163s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
163s Get:98 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-minqa amd64 1.2.8-1 [119 kB]
163s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnlopt0 amd64 2.7.1-7ubuntu1 [189 kB]
163s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nloptr amd64 2.2.1-2 [251 kB]
163s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
163s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB]
163s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reformulas all 0.4.4-1 [151 kB]
163s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
163s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
164s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB]
164s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lme4 amd64 1.1-38-1 [4197 kB]
164s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-backports amd64 1.5.0-2 [121 kB]
164s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
164s Get:110 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
164s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
164s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
164s Get:113 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
164s Get:114 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
164s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
164s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
164s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
164s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
164s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
164s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
164s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
164s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
164s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
164s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
164s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
164s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
164s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
164s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
164s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-broom all 1.0.12+dfsg-1 [1708 kB]
164s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-numderiv all 2016.8-1.1-3build1 [116 kB]
164s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
164s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
165s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
165s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
165s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
165s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
165s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
165s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
165s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
165s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deriv all 4.2.0-1 [154 kB]
165s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB]
165s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fracdiff amd64 1.5-3-1 [108 kB]
165s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-zoo amd64 1.8-15-1 [1025 kB]
165s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lmtest amd64 0.9.40-1build1 [400 kB]
165s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timedate amd64 4052.112-1 [1298 kB]
165s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quadprog amd64 1.5-8-1build2 [32.6 kB]
165s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xts amd64 0.14.1-1 [1198 kB]
165s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
165s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ttr amd64 0.24.4-1 [511 kB]
165s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
165s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quantmod all 0.4.28-1 [1037 kB]
165s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tseries amd64 0.10-59-3 [382 kB]
165s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-urca amd64 1.3-4-1build1 [1052 kB]
165s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB]
165s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-forecast amd64 8.23.0-1 [1569 kB]
165s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-modelr all 0.1.11-1 [195 kB]
165s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-microbenchmark amd64 1.5.0-1 [67.4 kB]
165s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-doby all 4.7.1-3 [4741 kB]
166s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
166s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
166s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
166s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
166s Get:163 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
166s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
166s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pbkrtest all 0.5.5-1 [217 kB]
166s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB]
166s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixmodels all 0.5-4-1 [351 kB]
166s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB]
167s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
167s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB]
167s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
167s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-e1071 amd64 1.7-17-1 [579 kB]
167s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
167s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
167s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
167s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
167s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build2 [155 kB]
167s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
167s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB]
167s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tzdb amd64 0.5.0-1 [538 kB]
167s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clock amd64 0.7.2-1 [1903 kB]
167s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB]
167s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsevctrs amd64 0.2.0-2 [170 kB]
167s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hardhat all 1.4.2+dfsg-1 [596 kB]
167s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB]
167s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB]
167s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB]
167s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB]
167s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
167s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-globals all 0.19.0-1 [160 kB]
167s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB]
167s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB]
167s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB]
167s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
167s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB]
167s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-squarem all 2021.1-1build1 [180 kB]
167s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lava all 1.8.2+dfsg-1 [2210 kB]
167s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB]
167s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB]
167s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timechange amd64 0.3.0-2 [201 kB]
167s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB]
167s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
167s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB]
167s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB]
168s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB]
168s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quantreg amd64 6.1-1 [1455 kB]
168s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-car all 3.1-5-1 [1526 kB]
168s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sandwich all 3.1-1-1build1 [1483 kB]
168s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-aer all 1.2-15-1 [2607 kB]
168s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
168s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB]
168s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
168s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
168s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
168s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
168s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
168s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
168s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
168s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
168s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
168s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
168s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
168s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-catools amd64 1.18.3-1 [209 kB]
168s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-collapse amd64 2.1.0-1 [3485 kB]
169s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
169s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
169s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
169s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
169s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
169s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
169s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
169s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
169s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
169s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
169s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
169s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crosstalk all 1.2.2+dfsg-1 [181 kB]
169s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gbutils all 0.5.1-2 [317 kB]
169s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cvar all 0.6-3 [139 kB]
169s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB]
169s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dynlm all 0.3.6-2build2 [55.2 kB]
169s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mitools all 2.4-2build2 [266 kB]
169s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survey amd64 4.4-2-2 [3453 kB]
169s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-estimability all 1.5.1-1 [50.9 kB]
169s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-insight all 1.4.4+dfsg-1 [2367 kB]
170s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-effects all 4.2.4-1 [2350 kB]
170s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB]
170s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timeseries all 4052.112-1 [1981 kB]
170s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatial amd64 7.3-18-1 [137 kB]
170s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gss amd64 2.2-10-1 [1677 kB]
170s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stabledist all 0.7-2-1 [78.7 kB]
170s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fbasics amd64 4052.98-1 [1507 kB]
170s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fgarch amd64 4052.93-1 [680 kB]
170s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreign amd64 0.8.91-1 [245 kB]
170s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtools amd64 3.9.5-1build1 [345 kB]
170s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gdata all 3.0.1-1build1 [491 kB]
170s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gplots all 3.3.0-1 [3825 kB]
170s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
170s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
170s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
170s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
170s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB]
170s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-maxlik all 1.5-2.2-1 [1115 kB]
171s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plm all 2.6-7-1 [1823 kB]
171s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pscl amd64 1.5.9-1 [3381 kB]
171s Get:265 http://ftpmaster.internal/ubuntu resolute/main amd64 libglvnd0 amd64 1.7.0-3 [64.1 kB]
171s Get:266 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx0 amd64 1.7.0-3 [38.9 kB]
171s Get:267 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1 amd64 1.7.0-3 [98.3 kB]
171s Get:268 http://ftpmaster.internal/ubuntu resolute/main amd64 libopengl0 amd64 1.7.0-3 [32.8 kB]
171s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 libglu1-mesa amd64 9.0.2-1.1build2 [159 kB]
171s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rgl amd64 1.3.34-1 [4182 kB]
171s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rocr all 1.0-12-1 [465 kB]
171s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scatterplot3d all 0.3-44-1 [349 kB]
171s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-strucchange amd64 1.5-4-1build1 [944 kB]
171s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-systemfit all 1.1-30-1 [1174 kB]
172s Preconfiguring packages ...
172s Fetched 253 MB in 10s (25.1 MB/s)
172s Selecting previously unselected package fonts-dejavu-mono.
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172s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8build1_all.deb ...
172s Unpacking fonts-dejavu-mono (2.37-8build1) ...
172s Selecting previously unselected package fonts-dejavu-core.
172s Preparing to unpack .../001-fonts-dejavu-core_2.37-8build1_all.deb ...
172s Unpacking fonts-dejavu-core (2.37-8build1) ...
172s Selecting previously unselected package fontconfig-config.
172s Preparing to unpack .../002-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
172s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
172s Selecting previously unselected package libfontconfig1:amd64.
172s Preparing to unpack .../003-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
172s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
172s Selecting previously unselected package fontconfig.
172s Preparing to unpack .../004-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
172s Unpacking fontconfig (2.17.1-3ubuntu1) ...
172s Selecting previously unselected package fonts-font-awesome.
172s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ...
172s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
172s Selecting previously unselected package fonts-glyphicons-halflings.
172s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
172s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
172s Selecting previously unselected package fonts-mathjax.
172s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
172s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
172s Selecting previously unselected package javascript-common.
172s Preparing to unpack .../008-javascript-common_12+nmu1build1_all.deb ...
172s Unpacking javascript-common (12+nmu1build1) ...
172s Selecting previously unselected package libblas3:amd64.
172s Preparing to unpack .../009-libblas3_3.12.1-7ubuntu1_amd64.deb ...
172s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ...
172s Selecting previously unselected package libpixman-1-0:amd64.
172s Preparing to unpack .../010-libpixman-1-0_0.46.4-1_amd64.deb ...
172s Unpacking libpixman-1-0:amd64 (0.46.4-1) ...
172s Selecting previously unselected package libxcb-render0:amd64.
172s Preparing to unpack .../011-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
172s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
172s Selecting previously unselected package libxcb-shm0:amd64.
172s Preparing to unpack .../012-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
172s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
172s Selecting previously unselected package libxrender1:amd64.
172s Preparing to unpack .../013-libxrender1_1%3a0.9.12-1_amd64.deb ...
172s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
172s Selecting previously unselected package libcairo2:amd64.
172s Preparing to unpack .../014-libcairo2_1.18.4-3_amd64.deb ...
172s Unpacking libcairo2:amd64 (1.18.4-3) ...
172s Selecting previously unselected package libdatrie1:amd64.
172s Preparing to unpack .../015-libdatrie1_0.2.14-1_amd64.deb ...
172s Unpacking libdatrie1:amd64 (0.2.14-1) ...
172s Selecting previously unselected package libdeflate0:amd64.
172s Preparing to unpack .../016-libdeflate0_1.23-2build1_amd64.deb ...
172s Unpacking libdeflate0:amd64 (1.23-2build1) ...
172s Selecting previously unselected package libpciaccess0:amd64.
172s Preparing to unpack .../017-libpciaccess0_0.18.1-1ubuntu3_amd64.deb ...
172s Unpacking libpciaccess0:amd64 (0.18.1-1ubuntu3) ...
172s Selecting previously unselected package libdrm-intel1:amd64.
172s Preparing to unpack .../018-libdrm-intel1_2.4.131-1_amd64.deb ...
172s Unpacking libdrm-intel1:amd64 (2.4.131-1) ...
172s Selecting previously unselected package libx11-xcb1:amd64.
172s Preparing to unpack .../019-libx11-xcb1_2%3a1.8.12-1build1_amd64.deb ...
172s Unpacking libx11-xcb1:amd64 (2:1.8.12-1build1) ...
172s Selecting previously unselected package libxcb-dri3-0:amd64.
172s Preparing to unpack .../020-libxcb-dri3-0_1.17.0-2ubuntu1_amd64.deb ...
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172s Selecting previously unselected package libxcb-present0:amd64.
172s Preparing to unpack .../021-libxcb-present0_1.17.0-2ubuntu1_amd64.deb ...
172s Unpacking libxcb-present0:amd64 (1.17.0-2ubuntu1) ...
172s Selecting previously unselected package libxcb-randr0:amd64.
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172s Unpacking libxcb-randr0:amd64 (1.17.0-2ubuntu1) ...
172s Selecting previously unselected package libxcb-sync1:amd64.
172s Preparing to unpack .../023-libxcb-sync1_1.17.0-2ubuntu1_amd64.deb ...
172s Unpacking libxcb-sync1:amd64 (1.17.0-2ubuntu1) ...
172s Selecting previously unselected package libxcb-xfixes0:amd64.
172s Preparing to unpack .../024-libxcb-xfixes0_1.17.0-2ubuntu1_amd64.deb ...
172s Unpacking libxcb-xfixes0:amd64 (1.17.0-2ubuntu1) ...
172s Selecting previously unselected package libxshmfence1:amd64.
172s Preparing to unpack .../025-libxshmfence1_1.3.3-1build1_amd64.deb ...
172s Unpacking libxshmfence1:amd64 (1.3.3-1build1) ...
172s Selecting previously unselected package mesa-libgallium:amd64.
172s Preparing to unpack .../026-mesa-libgallium_25.3.3-1ubuntu1_amd64.deb ...
172s Unpacking mesa-libgallium:amd64 (25.3.3-1ubuntu1) ...
173s Selecting previously unselected package libgbm1:amd64.
173s Preparing to unpack .../027-libgbm1_25.3.3-1ubuntu1_amd64.deb ...
173s Unpacking libgbm1:amd64 (25.3.3-1ubuntu1) ...
173s Selecting previously unselected package libgfortran5:amd64.
173s Preparing to unpack .../028-libgfortran5_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libvulkan1:amd64.
173s Preparing to unpack .../029-libvulkan1_1.4.335.0-1_amd64.deb ...
173s Unpacking libvulkan1:amd64 (1.4.335.0-1) ...
173s Selecting previously unselected package libgl1-mesa-dri:amd64.
173s Preparing to unpack .../030-libgl1-mesa-dri_25.3.3-1ubuntu1_amd64.deb ...
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173s Selecting previously unselected package libxcb-glx0:amd64.
173s Preparing to unpack .../031-libxcb-glx0_1.17.0-2ubuntu1_amd64.deb ...
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173s Selecting previously unselected package libxxf86vm1:amd64.
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173s Unpacking libxxf86vm1:amd64 (1:1.1.4-2) ...
173s Selecting previously unselected package libglx-mesa0:amd64.
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173s Selecting previously unselected package libgomp1:amd64.
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173s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libgraphite2-3:amd64.
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173s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
173s Selecting previously unselected package libharfbuzz0b:amd64.
173s Preparing to unpack .../036-libharfbuzz0b_12.3.2-1_amd64.deb ...
173s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ...
173s Selecting previously unselected package x11-common.
173s Preparing to unpack .../037-x11-common_1%3a7.7+24ubuntu1_all.deb ...
173s Unpacking x11-common (1:7.7+24ubuntu1) ...
173s Selecting previously unselected package libice6:amd64.
173s Preparing to unpack .../038-libice6_2%3a1.1.1-1build1_amd64.deb ...
173s Unpacking libice6:amd64 (2:1.1.1-1build1) ...
173s Selecting previously unselected package libjpeg-turbo8:amd64.
173s Preparing to unpack .../039-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ...
173s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
173s Selecting previously unselected package libjpeg8:amd64.
173s Preparing to unpack .../040-libjpeg8_8c-2ubuntu12_amd64.deb ...
173s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ...
173s Selecting previously unselected package libjs-bootstrap.
173s Preparing to unpack .../041-libjs-bootstrap_3.4.1+dfsg-6_all.deb ...
173s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ...
173s Selecting previously unselected package libjs-popper.js.
173s Preparing to unpack .../042-libjs-popper.js_1.16.1+ds-6build1_all.deb ...
173s Unpacking libjs-popper.js (1.16.1+ds-6build1) ...
173s Selecting previously unselected package libjs-bootstrap4.
173s Preparing to unpack .../043-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ...
173s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ...
173s Selecting previously unselected package libjs-d3.
173s Preparing to unpack .../044-libjs-d3_3.5.17-4build1_all.deb ...
173s Unpacking libjs-d3 (3.5.17-4build1) ...
173s Selecting previously unselected package libjs-es5-shim.
173s Preparing to unpack .../045-libjs-es5-shim_4.6.7-2_all.deb ...
173s Unpacking libjs-es5-shim (4.6.7-2) ...
173s Selecting previously unselected package libjs-highlight.js.
173s Preparing to unpack .../046-libjs-highlight.js_10.7.3+dfsg-2_all.deb ...
173s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ...
173s Selecting previously unselected package libjs-jquery.
173s Preparing to unpack .../047-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ...
173s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
173s Selecting previously unselected package libjs-jquery-datatables.
173s Preparing to unpack .../048-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ...
173s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
173s Selecting previously unselected package libjs-sifter.js.
173s Preparing to unpack .../049-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
173s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
173s Selecting previously unselected package libjs-microplugin.js.
173s Preparing to unpack .../050-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ...
173s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ...
173s Selecting previously unselected package libjs-jquery-selectize.js.
173s Preparing to unpack .../051-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
173s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
173s Selecting previously unselected package libjs-jquery-ui.
173s Preparing to unpack .../052-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ...
173s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ...
173s Selecting previously unselected package libjs-json.
173s Preparing to unpack .../053-libjs-json_0~20221030+~1.0.8-1build1_all.deb ...
173s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ...
173s Selecting previously unselected package libjs-prettify.
173s Preparing to unpack .../054-libjs-prettify_2015.12.04+dfsg-3_all.deb ...
173s Unpacking libjs-prettify (2015.12.04+dfsg-3) ...
173s Selecting previously unselected package liblapack3:amd64.
173s Preparing to unpack .../055-liblapack3_3.12.1-7ubuntu1_amd64.deb ...
173s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ...
173s Selecting previously unselected package liblerc4:amd64.
173s Preparing to unpack .../056-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ...
173s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
173s Selecting previously unselected package liblua5.4-0:amd64.
173s Preparing to unpack .../057-liblua5.4-0_5.4.8-1_amd64.deb ...
173s Unpacking liblua5.4-0:amd64 (5.4.8-1) ...
173s Selecting previously unselected package libthai-data.
173s Preparing to unpack .../058-libthai-data_0.1.30-1_all.deb ...
173s Unpacking libthai-data (0.1.30-1) ...
173s Selecting previously unselected package libthai0:amd64.
173s Preparing to unpack .../059-libthai0_0.1.30-1_amd64.deb ...
173s Unpacking libthai0:amd64 (0.1.30-1) ...
173s Selecting previously unselected package libpango-1.0-0:amd64.
173s Preparing to unpack .../060-libpango-1.0-0_1.57.0-1_amd64.deb ...
173s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ...
173s Selecting previously unselected package libpangoft2-1.0-0:amd64.
173s Preparing to unpack .../061-libpangoft2-1.0-0_1.57.0-1_amd64.deb ...
173s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ...
173s Selecting previously unselected package libpangocairo-1.0-0:amd64.
173s Preparing to unpack .../062-libpangocairo-1.0-0_1.57.0-1_amd64.deb ...
173s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ...
173s Selecting previously unselected package libpaper2:amd64.
173s Preparing to unpack .../063-libpaper2_2.2.5-0.3build1_amd64.deb ...
173s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ...
173s Selecting previously unselected package libpaper-utils.
173s Preparing to unpack .../064-libpaper-utils_2.2.5-0.3build1_amd64.deb ...
173s Unpacking libpaper-utils (2.2.5-0.3build1) ...
173s Selecting previously unselected package libsharpyuv0:amd64.
173s Preparing to unpack .../065-libsharpyuv0_1.5.0-0.1build1_amd64.deb ...
173s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ...
173s Selecting previously unselected package libsm6:amd64.
173s Preparing to unpack .../066-libsm6_2%3a1.2.6-1build1_amd64.deb ...
173s Unpacking libsm6:amd64 (2:1.2.6-1build1) ...
173s Selecting previously unselected package libtcl8.6:amd64.
173s Preparing to unpack .../067-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ...
173s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
173s Selecting previously unselected package libjbig0:amd64.
173s Preparing to unpack .../068-libjbig0_2.1-6.1ubuntu3_amd64.deb ...
173s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ...
173s Selecting previously unselected package libwebp7:amd64.
173s Preparing to unpack .../069-libwebp7_1.5.0-0.1build1_amd64.deb ...
173s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ...
173s Selecting previously unselected package libtiff6:amd64.
173s Preparing to unpack .../070-libtiff6_4.7.0-3ubuntu3_amd64.deb ...
173s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ...
173s Selecting previously unselected package libxft2:amd64.
173s Preparing to unpack .../071-libxft2_2.3.6-1build2_amd64.deb ...
173s Unpacking libxft2:amd64 (2.3.6-1build2) ...
173s Selecting previously unselected package libxss1:amd64.
173s Preparing to unpack .../072-libxss1_1%3a1.2.3-1build4_amd64.deb ...
173s Unpacking libxss1:amd64 (1:1.2.3-1build4) ...
173s Selecting previously unselected package libtk8.6:amd64.
173s Preparing to unpack .../073-libtk8.6_8.6.17-1_amd64.deb ...
173s Unpacking libtk8.6:amd64 (8.6.17-1) ...
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173s Selecting previously unselected package node-html5shiv.
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174s Selecting previously unselected package r-cran-abind.
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174s Selecting previously unselected package r-cran-cardata.
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174s Selecting previously unselected package r-cran-formula.
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174s Selecting previously unselected package r-cran-mass.
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174s Selecting previously unselected package r-cran-lattice.
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174s Selecting previously unselected package r-cran-nlme.
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174s Selecting previously unselected package r-cran-matrix.
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174s Selecting previously unselected package r-cran-mgcv.
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174s Selecting previously unselected package r-cran-nnet.
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174s Selecting previously unselected package r-cran-boot.
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174s Selecting previously unselected package r-cran-littler.
174s Preparing to unpack .../094-r-cran-littler_0.3.22-1_amd64.deb ...
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174s Selecting previously unselected package r-cran-pkgkitten.
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174s Selecting previously unselected package r-cran-rcpp.
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174s Selecting previously unselected package r-cran-minqa.
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175s Selecting previously unselected package libnlopt0:amd64.
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175s Selecting previously unselected package r-cran-nloptr.
175s Preparing to unpack .../099-r-cran-nloptr_2.2.1-2_amd64.deb ...
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175s Selecting previously unselected package r-cran-rbibutils.
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175s Selecting previously unselected package r-cran-rdpack.
175s Preparing to unpack .../101-r-cran-rdpack_2.6.3-1_all.deb ...
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175s Selecting previously unselected package r-cran-reformulas.
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175s Selecting previously unselected package r-cran-rlang.
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175s Selecting previously unselected package r-cran-rcppeigen.
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175s Selecting previously unselected package r-cran-statmod.
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175s Selecting previously unselected package r-cran-lme4.
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175s Selecting previously unselected package r-cran-backports.
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175s Selecting previously unselected package r-cran-cli.
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175s Selecting previously unselected package r-cran-generics.
175s Preparing to unpack .../109-r-cran-generics_0.1.4-1_all.deb ...
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175s Selecting previously unselected package r-cran-glue.
175s Preparing to unpack .../110-r-cran-glue_1.8.0-1_amd64.deb ...
175s Unpacking r-cran-glue (1.8.0-1) ...
175s Selecting previously unselected package r-cran-lifecycle.
175s Preparing to unpack .../111-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
175s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
175s Selecting previously unselected package r-cran-magrittr.
175s Preparing to unpack .../112-r-cran-magrittr_2.0.3-1_amd64.deb ...
175s Unpacking r-cran-magrittr (2.0.3-1) ...
175s Selecting previously unselected package r-cran-utf8.
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175s Selecting previously unselected package r-cran-vctrs.
175s Preparing to unpack .../114-r-cran-vctrs_0.6.5-1_amd64.deb ...
175s Unpacking r-cran-vctrs (0.6.5-1) ...
175s Selecting previously unselected package r-cran-pillar.
175s Preparing to unpack .../115-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
175s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
175s Selecting previously unselected package r-cran-r6.
175s Preparing to unpack .../116-r-cran-r6_2.6.1-1_all.deb ...
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175s Selecting previously unselected package r-cran-fansi.
175s Preparing to unpack .../117-r-cran-fansi_1.0.6-2_amd64.deb ...
175s Unpacking r-cran-fansi (1.0.6-2) ...
175s Selecting previously unselected package r-cran-pkgconfig.
175s Preparing to unpack .../118-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
175s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
175s Selecting previously unselected package r-cran-tibble.
175s Preparing to unpack .../119-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
175s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
175s Selecting previously unselected package r-cran-withr.
175s Preparing to unpack .../120-r-cran-withr_3.0.2+dfsg-1_all.deb ...
175s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
175s Selecting previously unselected package r-cran-tidyselect.
175s Preparing to unpack .../121-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
175s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
175s Selecting previously unselected package r-cran-dplyr.
175s Preparing to unpack .../122-r-cran-dplyr_1.1.4-4_amd64.deb ...
175s Unpacking r-cran-dplyr (1.1.4-4) ...
175s Selecting previously unselected package r-cran-purrr.
175s Preparing to unpack .../123-r-cran-purrr_1.0.4-1_amd64.deb ...
175s Unpacking r-cran-purrr (1.0.4-1) ...
175s Selecting previously unselected package r-cran-stringi.
175s Preparing to unpack .../124-r-cran-stringi_1.8.4-1build2_amd64.deb ...
175s Unpacking r-cran-stringi (1.8.4-1build2) ...
175s Selecting previously unselected package r-cran-stringr.
175s Preparing to unpack .../125-r-cran-stringr_1.5.1-1_all.deb ...
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175s Selecting previously unselected package r-cran-cpp11.
175s Preparing to unpack .../126-r-cran-cpp11_0.5.3-1_all.deb ...
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175s Selecting previously unselected package r-cran-tidyr.
175s Preparing to unpack .../127-r-cran-tidyr_1.3.1-1_amd64.deb ...
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175s Selecting previously unselected package r-cran-broom.
175s Preparing to unpack .../128-r-cran-broom_1.0.12+dfsg-1_all.deb ...
175s Unpacking r-cran-broom (1.0.12+dfsg-1) ...
175s Selecting previously unselected package r-cran-numderiv.
175s Preparing to unpack .../129-r-cran-numderiv_2016.8-1.1-3build1_all.deb ...
175s Unpacking r-cran-numderiv (2016.8-1.1-3build1) ...
175s Selecting previously unselected package r-cran-gtable.
175s Preparing to unpack .../130-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
175s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
175s Selecting previously unselected package r-cran-isoband.
175s Preparing to unpack .../131-r-cran-isoband_0.2.7-1_amd64.deb ...
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175s Selecting previously unselected package r-cran-farver.
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175s Selecting previously unselected package r-cran-labeling.
175s Preparing to unpack .../133-r-cran-labeling_0.4.3-1_all.deb ...
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175s Selecting previously unselected package r-cran-rcolorbrewer.
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175s Selecting previously unselected package r-cran-viridislite.
175s Preparing to unpack .../135-r-cran-viridislite_0.4.3-1_all.deb ...
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175s Selecting previously unselected package r-cran-scales.
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175s Selecting previously unselected package r-cran-ggplot2.
175s Preparing to unpack .../137-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
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175s Selecting previously unselected package r-cran-cowplot.
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175s Selecting previously unselected package r-cran-deriv.
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176s Selecting previously unselected package r-cran-colorspace.
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176s Selecting previously unselected package r-cran-fracdiff.
176s Preparing to unpack .../141-r-cran-fracdiff_1.5-3-1_amd64.deb ...
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176s Selecting previously unselected package r-cran-zoo.
176s Preparing to unpack .../142-r-cran-zoo_1.8-15-1_amd64.deb ...
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176s Selecting previously unselected package r-cran-lmtest.
176s Preparing to unpack .../143-r-cran-lmtest_0.9.40-1build1_amd64.deb ...
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176s Selecting previously unselected package r-cran-timedate.
176s Preparing to unpack .../144-r-cran-timedate_4052.112-1_amd64.deb ...
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176s Selecting previously unselected package r-cran-quadprog.
176s Preparing to unpack .../145-r-cran-quadprog_1.5-8-1build2_amd64.deb ...
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176s Selecting previously unselected package r-cran-xts.
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176s Selecting previously unselected package r-cran-curl.
176s Preparing to unpack .../147-r-cran-curl_7.0.0+dfsg-1_amd64.deb ...
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176s Selecting previously unselected package r-cran-ttr.
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176s Selecting previously unselected package r-cran-jsonlite.
176s Preparing to unpack .../149-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ...
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176s Selecting previously unselected package r-cran-quantmod.
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176s Selecting previously unselected package r-cran-tseries.
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176s Selecting previously unselected package r-cran-urca.
176s Preparing to unpack .../152-r-cran-urca_1.3-4-1build1_amd64.deb ...
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176s Selecting previously unselected package r-cran-rcpparmadillo.
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176s Selecting previously unselected package r-cran-forecast.
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176s Selecting previously unselected package r-cran-modelr.
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176s Selecting previously unselected package r-cran-microbenchmark.
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176s Selecting previously unselected package r-cran-doby.
176s Preparing to unpack .../157-r-cran-doby_4.7.1-3_all.deb ...
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176s Selecting previously unselected package r-cran-evaluate.
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176s Selecting previously unselected package r-cran-xfun.
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176s Selecting previously unselected package r-cran-highr.
176s Preparing to unpack .../160-r-cran-highr_0.11+dfsg-1_all.deb ...
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176s Selecting previously unselected package r-cran-yaml.
176s Preparing to unpack .../161-r-cran-yaml_2.3.10-1_amd64.deb ...
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176s Selecting previously unselected package libjs-mathjax.
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176s Selecting previously unselected package r-cran-knitr.
176s Preparing to unpack .../163-r-cran-knitr_1.51+dfsg-1_all.deb ...
176s Unpacking r-cran-knitr (1.51+dfsg-1) ...
176s Selecting previously unselected package r-cran-pbkrtest.
176s Preparing to unpack .../164-r-cran-pbkrtest_0.5.5-1_all.deb ...
176s Unpacking r-cran-pbkrtest (0.5.5-1) ...
176s Selecting previously unselected package r-cran-sparsem.
176s Preparing to unpack .../165-r-cran-sparsem_1.84-2-1_amd64.deb ...
176s Unpacking r-cran-sparsem (1.84-2-1) ...
176s Selecting previously unselected package r-cran-matrixmodels.
176s Preparing to unpack .../166-r-cran-matrixmodels_0.5-4-1_all.deb ...
176s Unpacking r-cran-matrixmodels (0.5-4-1) ...
176s Selecting previously unselected package r-cran-survival.
176s Preparing to unpack .../167-r-cran-survival_3.8-6-1_amd64.deb ...
176s Unpacking r-cran-survival (3.8-6-1) ...
176s Selecting previously unselected package r-cran-matrixstats.
176s Preparing to unpack .../168-r-cran-matrixstats_1.5.0-1_amd64.deb ...
176s Unpacking r-cran-matrixstats (1.5.0-1) ...
177s Selecting previously unselected package r-cran-class.
177s Preparing to unpack .../169-r-cran-class_7.3-23-1_amd64.deb ...
177s Unpacking r-cran-class (7.3-23-1) ...
177s Selecting previously unselected package r-cran-proxy.
177s Preparing to unpack .../170-r-cran-proxy_0.4-27-1_amd64.deb ...
177s Unpacking r-cran-proxy (0.4-27-1) ...
177s Selecting previously unselected package r-cran-e1071.
177s Preparing to unpack .../171-r-cran-e1071_1.7-17-1_amd64.deb ...
177s Unpacking r-cran-e1071 (1.7-17-1) ...
177s Selecting previously unselected package r-cran-codetools.
177s Preparing to unpack .../172-r-cran-codetools_0.2-20-1build1_all.deb ...
177s Unpacking r-cran-codetools (0.2-20-1build1) ...
177s Selecting previously unselected package r-cran-iterators.
177s Preparing to unpack .../173-r-cran-iterators_1.0.14-1build1_all.deb ...
177s Unpacking r-cran-iterators (1.0.14-1build1) ...
177s Selecting previously unselected package r-cran-foreach.
177s Preparing to unpack .../174-r-cran-foreach_1.5.2-1build1_all.deb ...
177s Unpacking r-cran-foreach (1.5.2-1build1) ...
177s Selecting previously unselected package r-cran-data.table.
177s Preparing to unpack .../175-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ...
177s Unpacking r-cran-data.table (1.17.0+dfsg-1) ...
177s Selecting previously unselected package r-cran-modelmetrics.
177s Preparing to unpack .../176-r-cran-modelmetrics_1.2.2.2-1build2_amd64.deb ...
177s Unpacking r-cran-modelmetrics (1.2.2.2-1build2) ...
177s Selecting previously unselected package r-cran-plyr.
177s Preparing to unpack .../177-r-cran-plyr_1.8.9-1_amd64.deb ...
177s Unpacking r-cran-plyr (1.8.9-1) ...
177s Selecting previously unselected package r-cran-proc.
177s Preparing to unpack .../178-r-cran-proc_1.18.5-1_amd64.deb ...
177s Unpacking r-cran-proc (1.18.5-1) ...
177s Selecting previously unselected package r-cran-tzdb.
177s Preparing to unpack .../179-r-cran-tzdb_0.5.0-1_amd64.deb ...
177s Unpacking r-cran-tzdb (0.5.0-1) ...
177s Selecting previously unselected package r-cran-clock.
177s Preparing to unpack .../180-r-cran-clock_0.7.2-1_amd64.deb ...
177s Unpacking r-cran-clock (0.7.2-1) ...
177s Selecting previously unselected package r-cran-gower.
177s Preparing to unpack .../181-r-cran-gower_1.0.2-1_amd64.deb ...
177s Unpacking r-cran-gower (1.0.2-1) ...
177s Selecting previously unselected package r-cran-sparsevctrs.
177s Preparing to unpack .../182-r-cran-sparsevctrs_0.2.0-2_amd64.deb ...
177s Unpacking r-cran-sparsevctrs (0.2.0-2) ...
177s Selecting previously unselected package r-cran-hardhat.
177s Preparing to unpack .../183-r-cran-hardhat_1.4.2+dfsg-1_all.deb ...
177s Unpacking r-cran-hardhat (1.4.2+dfsg-1) ...
177s Selecting previously unselected package r-cran-rpart.
177s Preparing to unpack .../184-r-cran-rpart_4.1.24-1build1_amd64.deb ...
177s Unpacking r-cran-rpart (4.1.24-1build1) ...
177s Selecting previously unselected package r-cran-shape.
177s Preparing to unpack .../185-r-cran-shape_1.4.6.1-1_all.deb ...
177s Unpacking r-cran-shape (1.4.6.1-1) ...
177s Selecting previously unselected package r-cran-diagram.
177s Preparing to unpack .../186-r-cran-diagram_1.6.5-2_all.deb ...
177s Unpacking r-cran-diagram (1.6.5-2) ...
177s Selecting previously unselected package r-cran-kernsmooth.
177s Preparing to unpack .../187-r-cran-kernsmooth_2.23-26-1build1_amd64.deb ...
177s Unpacking r-cran-kernsmooth (2.23-26-1build1) ...
177s Selecting previously unselected package r-cran-digest.
177s Preparing to unpack .../188-r-cran-digest_0.6.39-1_amd64.deb ...
177s Unpacking r-cran-digest (0.6.39-1) ...
177s Selecting previously unselected package r-cran-globals.
177s Preparing to unpack .../189-r-cran-globals_0.19.0-1_all.deb ...
177s Unpacking r-cran-globals (0.19.0-1) ...
177s Selecting previously unselected package r-cran-listenv.
177s Preparing to unpack .../190-r-cran-listenv_0.10.0+dfsg-1_all.deb ...
177s Unpacking r-cran-listenv (0.10.0+dfsg-1) ...
177s Selecting previously unselected package r-cran-parallelly.
177s Preparing to unpack .../191-r-cran-parallelly_1.42.0-1_amd64.deb ...
177s Unpacking r-cran-parallelly (1.42.0-1) ...
177s Selecting previously unselected package r-cran-future.
177s Preparing to unpack .../192-r-cran-future_1.34.0+dfsg-1_all.deb ...
177s Unpacking r-cran-future (1.34.0+dfsg-1) ...
177s Selecting previously unselected package r-cran-future.apply.
177s Preparing to unpack .../193-r-cran-future.apply_1.11.3+dfsg-1_all.deb ...
177s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ...
177s Selecting previously unselected package r-cran-progressr.
177s Preparing to unpack .../194-r-cran-progressr_0.15.1-1_all.deb ...
177s Unpacking r-cran-progressr (0.15.1-1) ...
177s Selecting previously unselected package r-cran-squarem.
177s Preparing to unpack .../195-r-cran-squarem_2021.1-1build1_all.deb ...
177s Unpacking r-cran-squarem (2021.1-1build1) ...
177s Selecting previously unselected package r-cran-lava.
177s Preparing to unpack .../196-r-cran-lava_1.8.2+dfsg-1_all.deb ...
177s Unpacking r-cran-lava (1.8.2+dfsg-1) ...
177s Selecting previously unselected package r-cran-prodlim.
177s Preparing to unpack .../197-r-cran-prodlim_2024.06.25-1_amd64.deb ...
177s Unpacking r-cran-prodlim (2024.06.25-1) ...
177s Selecting previously unselected package r-cran-ipred.
177s Preparing to unpack .../198-r-cran-ipred_0.9-15-1_amd64.deb ...
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177s Selecting previously unselected package r-cran-timechange.
177s Preparing to unpack .../199-r-cran-timechange_0.3.0-2_amd64.deb ...
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177s Selecting previously unselected package r-cran-lubridate.
177s Preparing to unpack .../200-r-cran-lubridate_1.9.4+dfsg-1_amd64.deb ...
177s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ...
177s Selecting previously unselected package r-cran-recipes.
177s Preparing to unpack .../201-r-cran-recipes_1.1.0+dfsg-1_all.deb ...
177s Unpacking r-cran-recipes (1.1.0+dfsg-1) ...
177s Selecting previously unselected package r-cran-reshape2.
177s Preparing to unpack .../202-r-cran-reshape2_1.4.4-2build2_amd64.deb ...
177s Unpacking r-cran-reshape2 (1.4.4-2build2) ...
177s Selecting previously unselected package r-cran-caret.
177s Preparing to unpack .../203-r-cran-caret_7.0-1+dfsg-1_amd64.deb ...
177s Unpacking r-cran-caret (7.0-1+dfsg-1) ...
177s Selecting previously unselected package r-cran-conquer.
177s Preparing to unpack .../204-r-cran-conquer_1.3.3-1_amd64.deb ...
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177s Selecting previously unselected package r-cran-quantreg.
177s Preparing to unpack .../205-r-cran-quantreg_6.1-1_amd64.deb ...
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177s Selecting previously unselected package r-cran-car.
177s Preparing to unpack .../206-r-cran-car_3.1-5-1_all.deb ...
177s Unpacking r-cran-car (3.1-5-1) ...
177s Selecting previously unselected package r-cran-sandwich.
177s Preparing to unpack .../207-r-cran-sandwich_3.1-1-1build1_all.deb ...
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177s Selecting previously unselected package r-cran-aer.
177s Preparing to unpack .../208-r-cran-aer_1.2-15-1_all.deb ...
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177s Selecting previously unselected package r-cran-base64enc.
177s Preparing to unpack .../209-r-cran-base64enc_0.1-3-3build1_amd64.deb ...
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177s Selecting previously unselected package r-cran-bdsmatrix.
177s Preparing to unpack .../210-r-cran-bdsmatrix_1.3-7-1_amd64.deb ...
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177s Selecting previously unselected package r-cran-bitops.
177s Preparing to unpack .../211-r-cran-bitops_1.0-9-1_amd64.deb ...
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177s Selecting previously unselected package r-cran-fastmap.
177s Preparing to unpack .../212-r-cran-fastmap_1.2.0-1_amd64.deb ...
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178s Selecting previously unselected package r-cran-cachem.
178s Preparing to unpack .../213-r-cran-cachem_1.1.0-1_amd64.deb ...
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178s Selecting previously unselected package r-cran-htmltools.
178s Preparing to unpack .../214-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
178s Unpacking r-cran-htmltools (0.5.8.1-1) ...
178s Selecting previously unselected package r-cran-jquerylib.
178s Preparing to unpack .../215-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ...
178s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ...
178s Selecting previously unselected package r-cran-memoise.
178s Preparing to unpack .../216-r-cran-memoise_2.0.1-1build1_all.deb ...
178s Unpacking r-cran-memoise (2.0.1-1build1) ...
178s Selecting previously unselected package r-cran-mime.
178s Preparing to unpack .../217-r-cran-mime_0.12-2_amd64.deb ...
178s Unpacking r-cran-mime (0.12-2) ...
178s Selecting previously unselected package r-cran-fs.
178s Preparing to unpack .../218-r-cran-fs_1.6.5+dfsg-1_amd64.deb ...
178s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
178s Selecting previously unselected package r-cran-rappdirs.
178s Preparing to unpack .../219-r-cran-rappdirs_0.3.3-1build1_amd64.deb ...
178s Unpacking r-cran-rappdirs (0.3.3-1build1) ...
178s Selecting previously unselected package r-cran-sass.
178s Preparing to unpack .../220-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
178s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
178s Selecting previously unselected package r-cran-bslib.
178s Preparing to unpack .../221-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
178s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
178s Selecting previously unselected package r-cran-catools.
178s Preparing to unpack .../222-r-cran-catools_1.18.3-1_amd64.deb ...
178s Unpacking r-cran-catools (1.18.3-1) ...
178s Selecting previously unselected package r-cran-collapse.
178s Preparing to unpack .../223-r-cran-collapse_2.1.0-1_amd64.deb ...
178s Unpacking r-cran-collapse (2.1.0-1) ...
178s Selecting previously unselected package r-cran-commonmark.
178s Preparing to unpack .../224-r-cran-commonmark_1.9.5-1_amd64.deb ...
178s Unpacking r-cran-commonmark (1.9.5-1) ...
178s Selecting previously unselected package r-cran-crayon.
178s Preparing to unpack .../225-r-cran-crayon_1.5.3-1_all.deb ...
178s Unpacking r-cran-crayon (1.5.3-1) ...
178s Selecting previously unselected package r-cran-lazyeval.
178s Preparing to unpack .../226-r-cran-lazyeval_0.2.2-1build2_amd64.deb ...
178s Unpacking r-cran-lazyeval (0.2.2-1build2) ...
178s Selecting previously unselected package r-cran-later.
178s Preparing to unpack .../227-r-cran-later_1.4.1+dfsg-1_amd64.deb ...
178s Unpacking r-cran-later (1.4.1+dfsg-1) ...
178s Selecting previously unselected package r-cran-promises.
178s Preparing to unpack .../228-r-cran-promises_1.3.2+dfsg-1_amd64.deb ...
178s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
178s Selecting previously unselected package r-cran-httpuv.
178s Preparing to unpack .../229-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ...
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178s Selecting previously unselected package r-cran-xtable.
178s Preparing to unpack .../230-r-cran-xtable_1%3a1.8-4-2build1_all.deb ...
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178s Selecting previously unselected package r-cran-fontawesome.
178s Preparing to unpack .../231-r-cran-fontawesome_0.5.3-1_all.deb ...
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178s Selecting previously unselected package r-cran-sourcetools.
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178s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
178s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
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178s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
178s Selecting previously unselected package r-cran-shiny.
178s Preparing to unpack .../234-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
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178s Selecting previously unselected package r-cran-crosstalk.
178s Preparing to unpack .../235-r-cran-crosstalk_1.2.2+dfsg-1_all.deb ...
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178s Selecting previously unselected package r-cran-gbutils.
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178s Selecting previously unselected package r-cran-cvar.
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178s Selecting previously unselected package r-cran-dbi.
178s Preparing to unpack .../238-r-cran-dbi_1.2.3-1build1_all.deb ...
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178s Selecting previously unselected package r-cran-dynlm.
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178s Selecting previously unselected package r-cran-mitools.
178s Preparing to unpack .../240-r-cran-mitools_2.4-2build2_all.deb ...
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178s Selecting previously unselected package r-cran-survey.
178s Preparing to unpack .../241-r-cran-survey_4.4-2-2_amd64.deb ...
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178s Selecting previously unselected package r-cran-estimability.
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178s Selecting previously unselected package r-cran-insight.
178s Preparing to unpack .../243-r-cran-insight_1.4.4+dfsg-1_all.deb ...
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178s Selecting previously unselected package r-cran-effects.
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178s Selecting previously unselected package r-cran-fastica.
178s Preparing to unpack .../245-r-cran-fastica_1.2-7-1_amd64.deb ...
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178s Selecting previously unselected package r-cran-timeseries.
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178s Selecting previously unselected package r-cran-spatial.
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178s Selecting previously unselected package r-cran-gss.
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178s Selecting previously unselected package r-cran-stabledist.
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178s Selecting previously unselected package r-cran-fbasics.
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178s Selecting previously unselected package r-cran-fgarch.
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179s Selecting previously unselected package r-cran-foreign.
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179s Selecting previously unselected package r-cran-gtools.
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179s Selecting previously unselected package r-cran-gplots.
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179s Selecting previously unselected package r-cran-tinytex.
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179s Selecting previously unselected package r-cran-rmarkdown.
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179s Selecting previously unselected package r-cran-misctools.
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179s Selecting previously unselected package libglvnd0:amd64.
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179s Setting up libjs-json (0~20221030+~1.0.8-1build1) ...
179s Setting up javascript-common (12+nmu1build1) ...
179s Setting up libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
179s Setting up libxcb-dri3-0:amd64 (1.17.0-2ubuntu1) ...
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179s Setting up libsharpyuv0:amd64 (1.5.0-0.1build1) ...
179s Setting up libx11-xcb1:amd64 (2:1.8.12-1build1) ...
179s Setting up libpciaccess0:amd64 (0.18.1-1ubuntu3) ...
179s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ...
179s Setting up libxcb-xfixes0:amd64 (1.17.0-2ubuntu1) ...
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179s Setting up libglvnd0:amd64 (1.7.0-3) ...
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179s Setting up unzip (6.0-29ubuntu1) ...
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179s Setting up x11-common (1:7.7+24ubuntu1) ...
180s Setting up node-html5shiv (3.7.3+dfsg-5) ...
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180s Setting up zip (3.0-15ubuntu3) ...
180s Setting up libblas3:amd64 (3.12.1-7ubuntu1) ...
180s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
180s Setting up libxcb-sync1:amd64 (1.17.0-2ubuntu1) ...
180s Setting up libjs-d3 (3.5.17-4build1) ...
180s Setting up fonts-dejavu-mono (2.37-8build1) ...
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180s Setting up libthai-data (0.1.30-1) ...
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180s Setting up libxss1:amd64 (1:1.2.3-1build4) ...
180s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ...
180s Setting up libpaper2:amd64 (2.2.5-0.3build1) ...
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180s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
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180s Setting up xdg-utils (1.2.1-2ubuntu2) ...
180s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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180s Setting up fontconfig-config (2.17.1-3ubuntu1) ...
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180s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
180s Setting up libpaper-utils (2.2.5-0.3build1) ...
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180s Setting up libthai0:amd64 (0.1.30-1) ...
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180s Setting up pandoc (3.1.11.1+ds-4) ...
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180s Setting up fontconfig (2.17.1-3ubuntu1) ...
182s Regenerating fonts cache... done.
182s Setting up libxft2:amd64 (2.3.6-1build2) ...
182s Setting up libglx-mesa0:amd64 (25.3.3-1ubuntu1) ...
182s Setting up libglx0:amd64 (1.7.0-3) ...
182s Setting up libtk8.6:amd64 (8.6.17-1) ...
182s Setting up libpango-1.0-0:amd64 (1.57.0-1) ...
182s Setting up libcairo2:amd64 (1.18.4-3) ...
182s Setting up libgl1:amd64 (1.7.0-3) ...
182s Setting up libxt6t64:amd64 (1:1.2.1-1.3) ...
182s Setting up libpangoft2-1.0-0:amd64 (1.57.0-1) ...
182s Setting up libpangocairo-1.0-0:amd64 (1.57.0-1) ...
182s Setting up r-base-core (4.5.2-1ubuntu2) ...
182s Creating config file /etc/R/Renviron with new version
182s Setting up r-cran-crayon (1.5.3-1) ...
182s Setting up r-cran-squarem (2021.1-1build1) ...
182s Setting up r-cran-labeling (0.4.3-1) ...
182s Setting up r-cran-sourcetools (0.1.7-1-1) ...
182s Setting up r-cran-lattice (0.22-9-1) ...
182s Setting up r-cran-nlme (3.1.168-1) ...
182s Setting up r-cran-farver (2.1.2-1) ...
182s Setting up r-cran-formula (1.2-5-1) ...
182s Setting up r-cran-gss (2.2-10-1) ...
182s Setting up r-cran-viridislite (0.4.3-1) ...
182s Setting up r-cran-sparsem (1.84-2-1) ...
182s Setting up r-cran-statmod (1.5.0-1) ...
182s Setting up r-cran-nnet (7.3-20-1) ...
182s Setting up r-cran-lazyeval (0.2.2-1build2) ...
182s Setting up r-cran-insight (1.4.4+dfsg-1) ...
182s Setting up r-cran-commonmark (1.9.5-1) ...
182s Setting up r-cran-proxy (0.4-27-1) ...
182s Setting up r-cran-r6 (2.6.1-1) ...
182s Setting up r-cran-pkgkitten (0.2.4-1) ...
182s Setting up r-cran-numderiv (2016.8-1.1-3build1) ...
182s Setting up r-cran-magrittr (2.0.3-1) ...
182s Setting up r-cran-rappdirs (0.3.3-1build1) ...
182s Setting up r-cran-microbenchmark (1.5.0-1) ...
182s Setting up r-cran-quadprog (1.5-8-1build2) ...
182s Setting up r-cran-littler (0.3.22-1) ...
182s Setting up r-cran-fs (1.6.5+dfsg-1) ...
182s Setting up r-cran-rcpp (1.1.0-1) ...
182s Setting up r-cran-curl (7.0.0+dfsg-1) ...
182s Setting up r-cran-codetools (0.2-20-1build1) ...
182s Setting up r-cran-estimability (1.5.1-1) ...
182s Setting up r-cran-nloptr (2.2.1-2) ...
182s Setting up r-cran-boot (1.3-32-1) ...
182s Setting up r-cran-rlang (1.1.5-3) ...
182s Setting up r-cran-matrixstats (1.5.0-1) ...
182s Setting up r-cran-listenv (0.10.0+dfsg-1) ...
182s Setting up r-cran-xfun (0.55+dfsg-1) ...
182s Setting up r-cran-urca (1.3-4-1build1) ...
182s Setting up r-cran-withr (3.0.2+dfsg-1) ...
182s Setting up r-cran-backports (1.5.0-2) ...
182s Setting up r-cran-deriv (4.2.0-1) ...
182s Setting up r-cran-mime (0.12-2) ...
182s Setting up r-cran-generics (0.1.4-1) ...
182s Setting up r-cran-base64enc (0.1-3-3build1) ...
182s Setting up r-cran-spatial (7.3-18-1) ...
182s Setting up r-cran-iterators (1.0.14-1build1) ...
182s Setting up r-cran-abind (1.4-8-1build1) ...
182s Setting up r-cran-digest (0.6.39-1) ...
182s Setting up r-cran-yaml (2.3.10-1) ...
182s Setting up r-cran-gower (1.0.2-1) ...
182s Setting up r-cran-evaluate (1.0.5-1) ...
182s Setting up r-cran-dbi (1.2.3-1build1) ...
182s Setting up r-cran-timedate (4052.112-1) ...
182s Setting up r-cran-highr (0.11+dfsg-1) ...
182s Setting up r-cran-foreach (1.5.2-1build1) ...
182s Setting up r-cran-fansi (1.0.6-2) ...
182s Setting up r-cran-fastica (1.2-7-1) ...
182s Setting up r-cran-cardata (3.0.6-1) ...
182s Setting up r-cran-mass (7.3-65-1) ...
182s Setting up r-cran-gtools (3.9.5-1build1) ...
182s Setting up r-cran-collapse (2.1.0-1) ...
182s Setting up r-cran-bdsmatrix (1.3-7-1) ...
182s Setting up r-cran-data.table (1.17.0+dfsg-1) ...
182s Setting up r-cran-glue (1.8.0-1) ...
182s Setting up r-cran-foreign (0.8.91-1) ...
182s Setting up r-cran-fracdiff (1.5-3-1) ...
182s Setting up r-cran-xtable (1:1.8-4-2build1) ...
182s Setting up r-cran-cli (3.6.4-1) ...
182s Setting up r-cran-rbibutils (2.3-1) ...
182s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ...
182s Setting up r-cran-bitops (1.0-9-1) ...
182s Setting up r-cran-progressr (0.15.1-1) ...
182s Setting up r-cran-shape (1.4.6.1-1) ...
182s Setting up r-cran-fastmap (1.2.0-1) ...
182s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
182s Setting up r-cran-pkgconfig (2.0.3-2build2) ...
182s Setting up r-cran-utf8 (1.2.4-1) ...
182s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
182s Setting up r-cran-parallelly (1.42.0-1) ...
182s Setting up r-cran-stringi (1.8.4-1build2) ...
182s Setting up r-cran-cpp11 (0.5.3-1) ...
182s Setting up r-cran-plyr (1.8.9-1) ...
182s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ...
182s Setting up r-cran-isoband (0.2.7-1) ...
182s Setting up r-cran-stabledist (0.7-2-1) ...
182s Setting up r-cran-diagram (1.6.5-2) ...
182s Setting up r-cran-scatterplot3d (0.3-44-1) ...
182s Setting up r-cran-scales (1.4.0-1) ...
182s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
182s Setting up r-cran-pscl (1.5.9-1) ...
182s Setting up r-cran-zoo (1.8-15-1) ...
182s Setting up r-cran-later (1.4.1+dfsg-1) ...
182s Setting up r-cran-matrix (1.7-4-1) ...
182s Setting up r-cran-htmltools (0.5.8.1-1) ...
182s Setting up r-cran-tinytex (0.58-1) ...
182s Setting up r-cran-kernsmooth (2.23-26-1build1) ...
182s Setting up r-cran-knitr (1.51+dfsg-1) ...
182s Setting up r-cran-mgcv (1.9-4-1) ...
182s Setting up r-cran-cachem (1.1.0-1) ...
182s Setting up r-cran-lmtest (0.9.40-1build1) ...
182s Setting up r-cran-sass (0.4.9+dfsg-1) ...
182s Setting up r-cran-catools (1.18.3-1) ...
182s Setting up r-cran-rcpparmadillo (15.2.3-1-1) ...
182s Setting up r-cran-tzdb (0.5.0-1) ...
182s Setting up r-cran-globals (0.19.0-1) ...
182s Setting up r-cran-gdata (3.0.1-1build1) ...
182s Setting up r-cran-vctrs (0.6.5-1) ...
182s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
182s Setting up r-cran-mitools (2.4-2build2) ...
182s Setting up r-cran-pillar (1.11.1+dfsg-1) ...
182s Setting up r-cran-minqa (1.2.8-1) ...
182s Setting up r-cran-misctools (0.6-28-1) ...
182s Setting up r-cran-stringr (1.5.1-1) ...
182s Setting up r-cran-class (7.3-23-1) ...
182s Setting up r-cran-modelmetrics (1.2.2.2-1build2) ...
182s Setting up r-cran-matrixmodels (0.5-4-1) ...
182s Setting up r-cran-timeseries (4052.112-1) ...
182s Setting up r-cran-sparsevctrs (0.2.0-2) ...
182s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
182s Setting up r-cran-clock (0.7.2-1) ...
182s Setting up r-cran-sandwich (3.1-1-1build1) ...
182s Setting up r-cran-proc (1.18.5-1) ...
182s Setting up r-cran-fontawesome (0.5.3-1) ...
182s Setting up r-cran-survival (3.8-6-1) ...
182s Setting up r-cran-xts (0.14.1-1) ...
182s Setting up r-cran-survey (4.4-2-2) ...
182s Setting up r-cran-rdpack (2.6.3-1) ...
182s Setting up r-cran-future (1.34.0+dfsg-1) ...
182s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ...
182s Setting up r-cran-strucchange (1.5-4-1build1) ...
182s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
182s Setting up r-cran-reshape2 (1.4.4-2build2) ...
182s Setting up r-cran-future.apply (1.11.3+dfsg-1) ...
182s Setting up r-cran-timechange (0.3.0-2) ...
182s Setting up r-cran-memoise (2.0.1-1build1) ...
182s Setting up r-cran-lava (1.8.2+dfsg-1) ...
182s Setting up r-cran-promises (1.3.2+dfsg-1) ...
182s Setting up r-cran-purrr (1.0.4-1) ...
182s Setting up r-cran-e1071 (1.7-17-1) ...
182s Setting up r-cran-maxlik (1.5-2.2-1) ...
182s Setting up r-cran-hardhat (1.4.2+dfsg-1) ...
182s Setting up r-cran-dplyr (1.1.4-4) ...
182s Setting up r-cran-gbutils (0.5.1-2) ...
182s Setting up r-cran-cvar (0.6-3) ...
182s Setting up r-cran-reformulas (0.4.4-1) ...
182s Setting up r-cran-gplots (3.3.0-1) ...
182s Setting up r-cran-ttr (0.24.4-1) ...
182s Setting up r-cran-lubridate (1.9.4+dfsg-1) ...
182s Setting up r-cran-rocr (1.0-12-1) ...
182s Setting up r-cran-prodlim (2024.06.25-1) ...
182s Setting up r-cran-fbasics (4052.98-1) ...
182s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
182s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
182s Setting up r-cran-rpart (4.1.24-1build1) ...
182s Setting up r-cran-plm (2.6-7-1) ...
182s Setting up r-cran-ipred (0.9-15-1) ...
182s Setting up r-cran-lme4 (1.1-38-1) ...
182s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
182s Setting up r-cran-tidyr (1.3.1-1) ...
182s Setting up r-cran-recipes (1.1.0+dfsg-1) ...
182s Setting up r-cran-fgarch (4052.93-1) ...
182s Setting up r-cran-quantmod (0.4.28-1) ...
182s Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
182s Setting up r-cran-effects (4.2.4-1) ...
182s Setting up r-cran-caret (7.0-1+dfsg-1) ...
182s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
182s Setting up r-cran-tseries (0.10-59-3) ...
182s Setting up r-cran-broom (1.0.12+dfsg-1) ...
182s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
182s Setting up r-cran-conquer (1.3.3-1) ...
182s Setting up r-cran-forecast (8.23.0-1) ...
182s Setting up r-cran-crosstalk (1.2.2+dfsg-1) ...
182s Setting up r-cran-quantreg (6.1-1) ...
182s Setting up r-cran-modelr (0.1.11-1) ...
182s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
182s Setting up r-cran-rgl (1.3.34-1) ...
182s Setting up r-cran-doby (4.7.1-3) ...
182s Setting up r-cran-pbkrtest (0.5.5-1) ...
182s Setting up r-cran-car (3.1-5-1) ...
182s Setting up r-cran-aer (1.2-15-1) ...
182s Setting up r-cran-dynlm (0.3.6-2build2) ...
182s Setting up r-cran-systemfit (1.1-30-1) ...
182s Processing triggers for man-db (2.13.1-1build1) ...
183s Processing triggers for install-info (7.2-5) ...
183s Processing triggers for libc-bin (2.42-2ubuntu4) ...
184s autopkgtest [01:52:29]: test run-unit-test: [-----------------------
184s BEGIN TEST Ch-Basics.R
184s 
184s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
184s Copyright (C) 2025 The R Foundation for Statistical Computing
184s Platform: x86_64-pc-linux-gnu
184s 
184s R is free software and comes with ABSOLUTELY NO WARRANTY.
184s You are welcome to redistribute it under certain conditions.
184s Type 'license()' or 'licence()' for distribution details.
184s 
184s R is a collaborative project with many contributors.
184s Type 'contributors()' for more information and
184s 'citation()' on how to cite R or R packages in publications.
184s 
184s Type 'demo()' for some demos, 'help()' for on-line help, or
184s 'help.start()' for an HTML browser interface to help.
184s Type 'q()' to quit R.
184s 
184s > ###################################################
184s > ### chunk number 1: setup
184s > ###################################################
184s > options(prompt = "R> ", continue = "+  ", width = 64,
184s +   digits = 4, show.signif.stars = FALSE, useFancyQuotes = FALSE)
184s R> 
184s R> options(SweaveHooks = list(onefig =   function() {par(mfrow = c(1,1))},
184s +                             twofig =   function() {par(mfrow = c(1,2))},                           
184s +                             threefig = function() {par(mfrow = c(1,3))},
184s +                             fourfig =  function() {par(mfrow = c(2,2))},
184s +                             sixfig =   function() {par(mfrow = c(3,2))}))
184s R> 
184s R> library("AER")
184s Loading required package: car
184s Loading required package: carData
184s Loading required package: lmtest
184s Loading required package: zoo
184s 
184s Attaching package: 'zoo'
184s 
184s The following objects are masked from 'package:base':
184s 
184s     as.Date, as.Date.numeric
184s 
185s Loading required package: sandwich
185s Loading required package: survival
185s R> 
185s R> suppressWarnings(RNGversion("3.5.0"))
185s R> set.seed(1071)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 2: calc1
185s R> ###################################################
185s R> 1 + 1
185s [1] 2
185s R> 2^3
185s [1] 8
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 3: calc2
185s R> ###################################################
185s R> log(exp(sin(pi/4)^2) * exp(cos(pi/4)^2))
185s [1] 1
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 4: vec1
185s R> ###################################################
185s R> x <- c(1.8, 3.14, 4, 88.169, 13)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 5: length
185s R> ###################################################
185s R> length(x)
185s [1] 5
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 6: vec2
185s R> ###################################################
185s R> 2 * x + 3
185s [1]   6.60   9.28  11.00 179.34  29.00
185s R> 5:1 * x + 1:5
185s [1]  10.00  14.56  15.00 180.34  18.00
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 7: vec3
185s R> ###################################################
185s R> log(x)
185s [1] 0.5878 1.1442 1.3863 4.4793 2.5649
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 8: subset1
185s R> ###################################################
185s R> x[c(1, 4)]
185s [1]  1.80 88.17
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 9: subset2
185s R> ###################################################
185s R> x[-c(2, 3, 5)]
185s [1]  1.80 88.17
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 10: pattern1
185s R> ###################################################
185s R> ones <- rep(1, 10)
185s R> even <- seq(from = 2, to = 20, by = 2)
185s R> trend <- 1981:2005
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 11: pattern2
185s R> ###################################################
185s R> c(ones, even)
185s  [1]  1  1  1  1  1  1  1  1  1  1  2  4  6  8 10 12 14 16 18 20
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 12: matrix1
185s R> ###################################################
185s R> A <- matrix(1:6, nrow = 2)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 13: matrix2
185s R> ###################################################
185s R> t(A)
185s      [,1] [,2]
185s [1,]    1    2
185s [2,]    3    4
185s [3,]    5    6
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 14: matrix3
185s R> ###################################################
185s R> dim(A)
185s [1] 2 3
185s R> nrow(A)
185s [1] 2
185s R> ncol(A)
185s [1] 3
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 15: matrix-subset
185s R> ###################################################
185s R> A1 <- A[1:2, c(1, 3)]
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 16: matrix4
185s R> ###################################################
185s R> solve(A1)
185s      [,1]  [,2]
185s [1,] -1.5  1.25
185s [2,]  0.5 -0.25
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 17: matrix-solve
185s R> ###################################################
185s R> A1 %*% solve(A1)
185s      [,1] [,2]
185s [1,]    1    0
185s [2,]    0    1
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 18: diag
185s R> ###################################################
185s R> diag(4)
185s      [,1] [,2] [,3] [,4]
185s [1,]    1    0    0    0
185s [2,]    0    1    0    0
185s [3,]    0    0    1    0
185s [4,]    0    0    0    1
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 19: matrix-combine1
185s R> ###################################################
185s R> cbind(1, A1)
185s      [,1] [,2] [,3]
185s [1,]    1    1    5
185s [2,]    1    2    6
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 20: matrix-combine2
185s R> ###################################################
185s R> rbind(A1, diag(4, 2))
185s      [,1] [,2]
185s [1,]    1    5
185s [2,]    2    6
185s [3,]    4    0
185s [4,]    0    4
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 21: vector-mode
185s R> ###################################################
185s R> x <- c(1.8, 3.14, 4, 88.169, 13)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 22: logical
185s R> ###################################################
185s R> x > 3.5
185s [1] FALSE FALSE  TRUE  TRUE  TRUE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 23: names
185s R> ###################################################
185s R> names(x) <- c("a", "b", "c", "d", "e")
185s R> x
185s     a     b     c     d     e 
185s  1.80  3.14  4.00 88.17 13.00 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 24: subset-more
185s R> ###################################################
185s R> x[3:5]
185s     c     d     e 
185s  4.00 88.17 13.00 
185s R> x[c("c", "d", "e")]
185s     c     d     e 
185s  4.00 88.17 13.00 
185s R> x[x > 3.5]
185s     c     d     e 
185s  4.00 88.17 13.00 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 25: list1
185s R> ###################################################
185s R> mylist <- list(sample = rnorm(5),
185s +    family = "normal distribution",
185s +    parameters = list(mean = 0, sd = 1))
185s R> mylist
185s $sample
185s [1]  0.3771 -0.9346  2.4302  1.3195  0.4503
185s 
185s $family
185s [1] "normal distribution"
185s 
185s $parameters
185s $parameters$mean
185s [1] 0
185s 
185s $parameters$sd
185s [1] 1
185s 
185s 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 26: list2
185s R> ###################################################
185s R> mylist[[1]]
185s [1]  0.3771 -0.9346  2.4302  1.3195  0.4503
185s R> mylist[["sample"]]
185s [1]  0.3771 -0.9346  2.4302  1.3195  0.4503
185s R> mylist$sample
185s [1]  0.3771 -0.9346  2.4302  1.3195  0.4503
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 27: list3
185s R> ###################################################
185s R> mylist[[3]]$sd
185s [1] 1
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 28: logical2
185s R> ###################################################
185s R> x <- c(1.8, 3.14, 4, 88.169, 13)
185s R> x > 3 & x <= 4
185s [1] FALSE  TRUE  TRUE FALSE FALSE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 29: logical3
185s R> ###################################################
185s R> which(x > 3 & x <= 4)
185s [1] 2 3
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 30: logical4
185s R> ###################################################
185s R> all(x > 3)
185s [1] FALSE
185s R> any(x > 3)
185s [1] TRUE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 31: logical5
185s R> ###################################################
185s R> (1.5 - 0.5) == 1
185s [1] TRUE
185s R> (1.9 - 0.9) == 1
185s [1] FALSE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 32: logical6
185s R> ###################################################
185s R> all.equal(1.9 - 0.9, 1)
185s [1] TRUE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 33: logical7
185s R> ###################################################
185s R> 7 + TRUE
185s [1] 8
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 34: coercion1
185s R> ###################################################
185s R> is.numeric(x)
185s [1] TRUE
185s R> is.character(x)
185s [1] FALSE
185s R> as.character(x)
185s [1] "1.8"    "3.14"   "4"      "88.169" "13"    
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 35: coercion2
185s R> ###################################################
185s R> c(1, "a")
185s [1] "1" "a"
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 36: rng1
185s R> ###################################################
185s R> set.seed(123)
185s R> rnorm(2)
185s [1] -0.5605 -0.2302
185s R> rnorm(2)
185s [1] 1.55871 0.07051
185s R> set.seed(123)
185s R> rnorm(2)
185s [1] -0.5605 -0.2302
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 37: rng2
185s R> ###################################################
185s R> sample(1:5)
185s [1] 5 1 2 3 4
185s R> sample(c("male", "female"), size = 5, replace = TRUE,
185s +    prob = c(0.2, 0.8))
185s [1] "female" "male"   "female" "female" "female"
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 38: flow1
185s R> ###################################################
185s R> x <- c(1.8, 3.14, 4, 88.169, 13)
185s R> if(rnorm(1) > 0) sum(x) else mean(x)
185s [1] 22.02
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 39: flow2
185s R> ###################################################
185s R> ifelse(x > 4, sqrt(x), x^2)
185s [1]  3.240  9.860 16.000  9.390  3.606
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 40: flow3
185s R> ###################################################
185s R> for(i in 2:5) {
185s +    x[i] <- x[i] - x[i-1]
185s +  }
185s R> x[-1]
185s [1]   1.34   2.66  85.51 -72.51
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 41: flow4
185s R> ###################################################
185s R> while(sum(x) < 100) {
185s +    x <- 2 * x
185s +  }
185s R> x
185s [1]   14.40   10.72   21.28  684.07 -580.07
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 42: cmeans
185s R> ###################################################
185s R> cmeans <- function(X) { 
185s +    rval <- rep(0, ncol(X))
185s +    for(j in 1:ncol(X)) {
185s +      mysum <- 0
185s +      for(i in 1:nrow(X)) mysum <- mysum + X[i,j]
185s +      rval[j] <- mysum/nrow(X)
185s +    }
185s +    return(rval)
185s +  }
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 43: colmeans1
185s R> ###################################################
185s R> X <- matrix(1:20, ncol = 2)
185s R> cmeans(X)
185s [1]  5.5 15.5
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 44: colmeans2
185s R> ###################################################
185s R> colMeans(X)
185s [1]  5.5 15.5
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 45: colmeans3 eval=FALSE
185s R> ###################################################
185s R> ## X <- matrix(rnorm(2*10^6), ncol = 2)
185s R> ## system.time(colMeans(X))
185s R> ## system.time(cmeans(X))
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 46: colmeans4
185s R> ###################################################
185s R> cmeans2 <- function(X) {
185s +    rval <- rep(0, ncol(X))
185s +    for(j in 1:ncol(X)) rval[j] <- mean(X[,j])
185s +    return(rval)
185s +  }
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 47: colmeans5 eval=FALSE
185s R> ###################################################
185s R> ## system.time(cmeans2(X))
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 48: colmeans6 eval=FALSE
185s R> ###################################################
185s R> ## apply(X, 2, mean)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 49: colmeans7 eval=FALSE
185s R> ###################################################
185s R> ## system.time(apply(X, 2, mean))
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 50: formula1
185s R> ###################################################
185s R> f <- y ~ x
185s R> class(f)
185s [1] "formula"
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 51: formula2
185s R> ###################################################
185s R> x <- seq(from = 0, to = 10, by = 0.5)
185s R> y <- 2 + 3 * x + rnorm(21)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 52: formula3 eval=FALSE
185s R> ###################################################
185s R> ## plot(y ~ x)
185s R> ## lm(y ~ x)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 53: formula3a
185s R> ###################################################
185s R> print(lm(y ~ x))
185s 
185s Call:
185s lm(formula = y ~ x)
185s 
185s Coefficients:
185s (Intercept)            x  
185s        2.26         2.91  
185s 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 54: formula3b
185s R> ###################################################
185s R> plot(y ~ x)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 55: formula3c
185s R> ###################################################
185s R> fm <- lm(y ~ x)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 56: mydata1
185s R> ###################################################
185s R> mydata <- data.frame(one = 1:10, two = 11:20, three = 21:30)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 57: mydata1a
185s R> ###################################################
185s R> mydata <- as.data.frame(matrix(1:30, ncol = 3))
185s R> names(mydata) <- c("one", "two", "three")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 58: mydata2
185s R> ###################################################
185s R> mydata$two
185s  [1] 11 12 13 14 15 16 17 18 19 20
185s R> mydata[, "two"]
185s  [1] 11 12 13 14 15 16 17 18 19 20
185s R> mydata[, 2]
185s  [1] 11 12 13 14 15 16 17 18 19 20
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 59: attach
185s R> ###################################################
185s R> attach(mydata)
185s R> mean(two)
185s [1] 15.5
185s R> detach(mydata)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 60: with
185s R> ###################################################
185s R> with(mydata, mean(two))
185s [1] 15.5
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 61: mydata-subset
185s R> ###################################################
185s R> mydata.sub <- subset(mydata, two <= 16, select = -two)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 62: write-table
185s R> ###################################################
185s R> write.table(mydata, file = "mydata.txt", col.names = TRUE)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 63: read-table
185s R> ###################################################
185s R> newdata <- read.table("mydata.txt", header = TRUE)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 64: save
185s R> ###################################################
185s R> save(mydata, file = "mydata.rda")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 65: load
185s R> ###################################################
185s R> load("mydata.rda")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 66: file-remove
185s R> ###################################################
185s R> file.remove("mydata.rda")
185s [1] TRUE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 67: data
185s R> ###################################################
185s R> data("Journals", package = "AER")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 68: foreign
185s R> ###################################################
185s R> library("foreign")
185s R> write.dta(mydata, file = "mydata.dta")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 69: read-dta
185s R> ###################################################
185s R> mydata <- read.dta("mydata.dta")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 70: cleanup
185s R> ###################################################
185s R> file.remove("mydata.dta")
185s [1] TRUE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 71: factor
185s R> ###################################################
185s R> g <- rep(0:1, c(2, 4))
185s R> g <- factor(g, levels = 0:1, labels = c("male", "female"))
185s R> g
185s [1] male   male   female female female female
185s Levels: male female
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 72: na1
185s R> ###################################################
185s R> newdata <- read.table("mydata.txt", na.strings = "-999")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 73: na2
185s R> ###################################################
185s R> file.remove("mydata.txt")
185s [1] TRUE
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 74: oop1
185s R> ###################################################
185s R> x <- c(1.8, 3.14, 4, 88.169, 13)
185s R> g <- factor(rep(c(0, 1), c(2, 4)), levels = c(0, 1),
185s +    labels = c("male", "female"))
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 75: oop2
185s R> ###################################################
185s R> summary(x)
185s    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
185s    1.80    3.14    4.00   22.02   13.00   88.17 
185s R> summary(g)
185s   male female 
185s      2      4 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 76: oop3
185s R> ###################################################
185s R> class(x)
185s [1] "numeric"
185s R> class(g)
185s [1] "factor"
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 77: oop4
185s R> ###################################################
185s R> summary
185s function (object, ...) 
185s UseMethod("summary")
185s <bytecode: 0x619e88930450>
185s <environment: namespace:base>
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 78: oop5
185s R> ###################################################
185s R> normsample <- function(n, ...) {
185s +    rval <- rnorm(n, ...)
185s +    class(rval) <- "normsample"
185s +    return(rval)
185s +  }
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 79: oop6
185s R> ###################################################
185s R> set.seed(123)
185s R> x <- normsample(10, mean = 5)
185s R> class(x)
185s [1] "normsample"
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 80: oop7
185s R> ###################################################
185s R> summary.normsample <- function(object, ...) {
185s +    rval <- c(length(object), mean(object), sd(object))
185s +    names(rval) <- c("sample size","mean","standard deviation")
185s +    return(rval)
185s +  }
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 81: oop8
185s R> ###################################################
185s R> summary(x)
185s        sample size               mean standard deviation 
185s            10.0000             5.0746             0.9538 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 82: journals-data eval=FALSE
185s R> ###################################################
185s R> ## data("Journals")
185s R> ## Journals$citeprice <- Journals$price/Journals$citations
185s R> ## attach(Journals)
185s R> ## plot(log(subs), log(citeprice))
185s R> ## rug(log(subs))
185s R> ## rug(log(citeprice), side = 2)
185s R> ## detach(Journals)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 83: journals-data1
185s R> ###################################################
185s R> data("Journals")
185s R> Journals$citeprice <- Journals$price/Journals$citations
185s R> attach(Journals)
185s R> plot(log(subs), log(citeprice))
185s R> rug(log(subs))
185s R> rug(log(citeprice), side = 2)
185s R> detach(Journals)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 84: plot-formula
185s R> ###################################################
185s R> plot(log(subs) ~ log(citeprice), data = Journals)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 85: graphics1
185s R> ###################################################
185s R> plot(log(subs) ~ log(citeprice), data = Journals, pch = 20,
185s +    col = "blue", ylim = c(0, 8), xlim = c(-7, 4),
185s +    main = "Library subscriptions")
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 86: graphics2
185s R> ###################################################
185s R> pdf("myfile.pdf", height = 5, width = 6)
185s R> plot(1:20, pch = 1:20, col = 1:20, cex = 2)
185s R> dev.off()
185s pdf 
185s   2 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 87: dnorm-annotate eval=FALSE
185s R> ###################################################
185s R> ## curve(dnorm, from = -5, to = 5, col = "slategray", lwd = 3,
185s R> ##   main = "Density of the standard normal distribution")
185s R> ## text(-5, 0.3, expression(f(x) == frac(1, sigma ~~
185s R> ##   sqrt(2*pi)) ~~ e^{-frac((x - mu)^2, 2*sigma^2)}), adj = 0)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 88: dnorm-annotate1
185s R> ###################################################
185s R> curve(dnorm, from = -5, to = 5, col = "slategray", lwd = 3,
185s +    main = "Density of the standard normal distribution")
185s R> text(-5, 0.3, expression(f(x) == frac(1, sigma ~~
185s +    sqrt(2*pi)) ~~ e^{-frac((x - mu)^2, 2*sigma^2)}), adj = 0)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 89: eda1
185s R> ###################################################
185s R> data("CPS1985")
185s R> str(CPS1985)
185s 'data.frame':	534 obs. of  11 variables:
185s  $ wage      : num  5.1 4.95 6.67 4 7.5 ...
185s  $ education : num  8 9 12 12 12 13 10 12 16 12 ...
185s  $ experience: num  21 42 1 4 17 9 27 9 11 9 ...
185s  $ age       : num  35 57 19 22 35 28 43 27 33 27 ...
185s  $ ethnicity : Factor w/ 3 levels "cauc","hispanic",..: 2 1 1 1 1 1 1 1 1 1 ...
185s  $ region    : Factor w/ 2 levels "south","other": 2 2 2 2 2 2 1 2 2 2 ...
185s  $ gender    : Factor w/ 2 levels "male","female": 2 2 1 1 1 1 1 1 1 1 ...
185s  $ occupation: Factor w/ 6 levels "worker","technical",..: 1 1 1 1 1 1 1 1 1 1 ...
185s  $ sector    : Factor w/ 3 levels "manufacturing",..: 1 1 1 3 3 3 3 3 1 3 ...
185s  $ union     : Factor w/ 2 levels "no","yes": 1 1 1 1 1 2 1 1 1 1 ...
185s  $ married   : Factor w/ 2 levels "no","yes": 2 2 1 1 2 1 1 1 2 1 ...
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 90: eda2
185s R> ###################################################
185s R> head(CPS1985)
185s       wage education experience age ethnicity region gender
185s 1     5.10         8         21  35  hispanic  other female
185s 1100  4.95         9         42  57      cauc  other female
185s 2     6.67        12          1  19      cauc  other   male
185s 3     4.00        12          4  22      cauc  other   male
185s 4     7.50        12         17  35      cauc  other   male
185s 5    13.07        13          9  28      cauc  other   male
185s      occupation        sector union married
185s 1        worker manufacturing    no     yes
185s 1100     worker manufacturing    no     yes
185s 2        worker manufacturing    no      no
185s 3        worker         other    no      no
185s 4        worker         other    no     yes
185s 5        worker         other   yes      no
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 91: eda3
185s R> ###################################################
185s R> levels(CPS1985$occupation)[c(2, 6)] <- c("techn", "mgmt")
185s R> attach(CPS1985)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 92: eda4
185s R> ###################################################
185s R> summary(wage)
185s    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
185s    1.00    5.25    7.78    9.02   11.25   44.50 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 93: eda5
185s R> ###################################################
185s R> mean(wage)
185s [1] 9.024
185s R> median(wage)
185s [1] 7.78
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 94: eda6
185s R> ###################################################
185s R> var(wage)
185s [1] 26.41
185s R> sd(wage)
185s [1] 5.139
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 95: wage-hist
185s R> ###################################################
185s R> hist(wage, freq = FALSE)
185s R> hist(log(wage), freq = FALSE)
185s R> lines(density(log(wage)), col = 4)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 96: wage-hist1
185s R> ###################################################
185s R> hist(wage, freq = FALSE)
185s R> hist(log(wage), freq = FALSE)
185s R> lines(density(log(wage)), col = 4)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 97: occ-table
185s R> ###################################################
185s R> summary(occupation)
185s   worker    techn services   office    sales     mgmt 
185s      156      105       83       97       38       55 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 98: occ-table
185s R> ###################################################
185s R> tab <- table(occupation)
185s R> prop.table(tab)
185s occupation
185s   worker    techn services   office    sales     mgmt 
185s  0.29213  0.19663  0.15543  0.18165  0.07116  0.10300 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 99: occ-barpie
185s R> ###################################################
185s R> barplot(tab)
185s R> pie(tab)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 100: occ-barpie
185s R> ###################################################
185s R> par(mar = c(4, 3, 1, 1))
185s R> barplot(tab, las = 3)
185s R> par(mar = c(2, 3, 1, 3))
185s R> pie(tab, radius = 1)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 101: xtabs
185s R> ###################################################
185s R> xtabs(~ gender + occupation, data = CPS1985)
185s         occupation
185s gender   worker techn services office sales mgmt
185s   male      126    53       34     21    21   34
185s   female     30    52       49     76    17   21
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 102: spine eval=FALSE
185s R> ###################################################
185s R> ## plot(gender ~ occupation, data = CPS1985)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 103: spine1
185s R> ###################################################
185s R> plot(gender ~ occupation, data = CPS1985)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 104: wageeduc-cor
185s R> ###################################################
185s R> cor(log(wage), education)
185s [1] 0.3804
185s R> cor(log(wage), education, method = "spearman")
185s [1] 0.3813
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 105: wageeduc-scatter eval=FALSE
185s R> ###################################################
185s R> ## plot(log(wage) ~ education)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 106: wageeduc-scatter1
185s R> ###################################################
185s R> plot(log(wage) ~ education)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 107: tapply
185s R> ###################################################
185s R> tapply(log(wage), gender, mean)
185s   male female 
185s  2.165  1.934 
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 108: boxqq1 eval=FALSE
185s R> ###################################################
185s R> ## plot(log(wage) ~ gender)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 109: boxqq2 eval=FALSE
185s R> ###################################################
185s R> ## mwage <- subset(CPS1985, gender == "male")$wage
185s R> ## fwage <- subset(CPS1985, gender == "female")$wage
185s R> ## qqplot(mwage, fwage, xlim = range(wage), ylim = range(wage),
185s R> ##   xaxs = "i", yaxs = "i", xlab = "male", ylab = "female")
185s R> ## abline(0, 1)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 110: qq
185s R> ###################################################
185s R> plot(log(wage) ~ gender)
185s R> mwage <- subset(CPS1985, gender == "male")$wage
185s R> fwage <- subset(CPS1985, gender == "female")$wage
185s R> qqplot(mwage, fwage, xlim = range(wage), ylim = range(wage),
185s +    xaxs = "i", yaxs = "i", xlab = "male", ylab = "female")
185s R> abline(0, 1)
185s R> 
185s R> 
185s R> ###################################################
185s R> ### chunk number 111: detach
185s R> ###################################################
185s R> detach(CPS1985)
185s R> 
185s R> 
185s R> 
185s BEGIN TEST Ch-Intro.R
185s 
185s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
185s Copyright (C) 2025 The R Foundation for Statistical Computing
185s Platform: x86_64-pc-linux-gnu
185s 
185s R is free software and comes with ABSOLUTELY NO WARRANTY.
185s You are welcome to redistribute it under certain conditions.
185s Type 'license()' or 'licence()' for distribution details.
185s 
185s R is a collaborative project with many contributors.
185s Type 'contributors()' for more information and
185s 'citation()' on how to cite R or R packages in publications.
185s 
185s Type 'demo()' for some demos, 'help()' for on-line help, or
185s 'help.start()' for an HTML browser interface to help.
185s Type 'q()' to quit R.
185s 
185s > if(!requireNamespace("quantreg") || !requireNamespace("KernSmooth")) q()
185s Loading required namespace: quantreg
186s Loading required namespace: KernSmooth
186s > 
186s > ###################################################
186s > ### chunk number 1: setup
186s > ###################################################
186s > options(prompt = "R> ", continue = "+  ", width = 64,
186s +   digits = 4, show.signif.stars = FALSE, useFancyQuotes = FALSE)
186s R> 
186s R> options(SweaveHooks = list(onefig =   function() {par(mfrow = c(1,1))},
186s +                             twofig =   function() {par(mfrow = c(1,2))},                           
186s +                             threefig = function() {par(mfrow = c(1,3))},
186s +                             fourfig =  function() {par(mfrow = c(2,2))},
186s +                             sixfig =   function() {par(mfrow = c(3,2))}))
186s R> 
186s R> library("AER")
186s Loading required package: car
186s Loading required package: carData
186s Loading required package: lmtest
186s Loading required package: zoo
186s 
186s Attaching package: 'zoo'
186s 
186s The following objects are masked from 'package:base':
186s 
186s     as.Date, as.Date.numeric
186s 
186s Loading required package: sandwich
186s Loading required package: survival
186s R> 
186s R> suppressWarnings(RNGversion("3.5.0"))
186s R> set.seed(1071)
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 2: journals-data
186s R> ###################################################
186s R> data("Journals", package = "AER")
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 3: journals-dim
186s R> ###################################################
186s R> dim(Journals)
186s [1] 180  10
186s R> names(Journals)
186s  [1] "title"        "publisher"    "society"      "price"       
186s  [5] "pages"        "charpp"       "citations"    "foundingyear"
186s  [9] "subs"         "field"       
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 4: journals-plot eval=FALSE
186s R> ###################################################
186s R> ## plot(log(subs) ~ log(price/citations), data = Journals)
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 5: journals-lm eval=FALSE
186s R> ###################################################
186s R> ## j_lm <- lm(log(subs) ~ log(price/citations), data = Journals)
186s R> ## abline(j_lm)
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 6: journals-lmplot
186s R> ###################################################
186s R> plot(log(subs) ~ log(price/citations), data = Journals)
186s R> j_lm <- lm(log(subs) ~ log(price/citations), data = Journals)
186s R> abline(j_lm)
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 7: journals-lm-summary
186s R> ###################################################
186s R> summary(j_lm)
186s 
186s Call:
186s lm(formula = log(subs) ~ log(price/citations), data = Journals)
186s 
186s Residuals:
186s     Min      1Q  Median      3Q     Max 
186s -2.7248 -0.5361  0.0372  0.4662  1.8481 
186s 
186s Coefficients:
186s                      Estimate Std. Error t value Pr(>|t|)
186s (Intercept)            4.7662     0.0559    85.2   <2e-16
186s log(price/citations)  -0.5331     0.0356   -15.0   <2e-16
186s 
186s Residual standard error: 0.75 on 178 degrees of freedom
186s Multiple R-squared:  0.557,	Adjusted R-squared:  0.555 
186s F-statistic:  224 on 1 and 178 DF,  p-value: <2e-16
186s 
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 8: cps-data
186s R> ###################################################
186s R> data("CPS1985", package = "AER")
186s R> cps <- CPS1985
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 9: cps-data1 eval=FALSE
186s R> ###################################################
186s R> ## data("CPS1985", package = "AER")
186s R> ## cps <- CPS1985
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 10: cps-reg
186s R> ###################################################
186s R> library("quantreg")
186s Loading required package: SparseM
186s 
186s Attaching package: 'quantreg'
186s 
186s The following object is masked from 'package:survival':
186s 
186s     untangle.specials
186s 
186s R> cps_lm <- lm(log(wage) ~ experience + I(experience^2) +
186s +    education, data = cps)
186s R> cps_rq <- rq(log(wage) ~ experience + I(experience^2) +
186s +    education, data = cps, tau = seq(0.2, 0.8, by = 0.15))
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 11: cps-predict
186s R> ###################################################
186s R> cps2 <- data.frame(education = mean(cps$education),
186s +    experience = min(cps$experience):max(cps$experience))
186s R> cps2 <- cbind(cps2, predict(cps_lm, newdata = cps2,
186s +    interval = "prediction"))
186s R> cps2 <- cbind(cps2,
186s +    predict(cps_rq, newdata = cps2, type = ""))  
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 12: rq-plot eval=FALSE
186s R> ###################################################
186s R> ## plot(log(wage) ~ experience, data = cps)
186s R> ## for(i in 6:10) lines(cps2[,i] ~ experience,
186s R> ##   data = cps2, col = "red")
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 13: rq-plot1
186s R> ###################################################
186s R> plot(log(wage) ~ experience, data = cps)
186s R> for(i in 6:10) lines(cps2[,i] ~ experience,
186s +    data = cps2, col = "red")
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 14: srq-plot eval=FALSE
186s R> ###################################################
186s R> ## plot(summary(cps_rq))
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 15: srq-plot1
186s R> ###################################################
186s R> try(plot(summary(cps_rq)))
186s Warning messages:
186s 1: In rq.fit.br(x, y, tau = tau, ci = TRUE, ...) :
186s   Solution may be nonunique
186s 2: In rq.fit.br(x, y, tau = tau, ci = TRUE, ...) :
186s   Solution may be nonunique
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 16: bkde-fit
186s R> ###################################################
186s R> library("KernSmooth")
186s KernSmooth 2.23 loaded
186s Copyright M. P. Wand 1997-2009
186s R> cps_bkde <- bkde2D(cbind(cps$experience, log(cps$wage)),
186s +    bandwidth = c(3.5, 0.5), gridsize = c(200, 200))
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 17: bkde-plot eval=FALSE
186s R> ###################################################
186s R> ## image(cps_bkde$x1, cps_bkde$x2, cps_bkde$fhat, 
186s R> ##   col = rev(gray.colors(10, gamma = 1)),
186s R> ##   xlab = "experience", ylab = "log(wage)")
186s R> ## box()
186s R> ## lines(fit ~ experience, data = cps2)
186s R> ## lines(lwr ~ experience, data = cps2, lty = 2)
186s R> ## lines(upr ~ experience, data = cps2, lty = 2)
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 18: bkde-plot1
186s R> ###################################################
186s R> image(cps_bkde$x1, cps_bkde$x2, cps_bkde$fhat, 
186s +    col = rev(gray.colors(10, gamma = 1)),
186s +    xlab = "experience", ylab = "log(wage)")
186s R> box()
186s R> lines(fit ~ experience, data = cps2)
186s R> lines(lwr ~ experience, data = cps2, lty = 2)
186s R> lines(upr ~ experience, data = cps2, lty = 2)
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 19: install eval=FALSE
186s R> ###################################################
186s R> ## install.packages("AER")
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 20: library
186s R> ###################################################
186s R> library("AER")
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 21: objects
186s R> ###################################################
186s R> objects()
186s [1] "CPS1985"  "Journals" "cps"      "cps2"     "cps_bkde"
186s [6] "cps_lm"   "cps_rq"   "i"        "j_lm"    
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 22: search
186s R> ###################################################
186s R> search()
186s  [1] ".GlobalEnv"         "package:KernSmooth"
186s  [3] "package:quantreg"   "package:SparseM"   
186s  [5] "package:AER"        "package:survival"  
186s  [7] "package:sandwich"   "package:lmtest"    
186s  [9] "package:zoo"        "package:car"       
186s [11] "package:carData"    "package:stats"     
186s [13] "package:graphics"   "package:grDevices" 
186s [15] "package:utils"      "package:datasets"  
186s [17] "package:methods"    "Autoloads"         
186s [19] "package:base"      
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 23: assignment
186s R> ###################################################
186s R> x <- 2
186s R> objects()
186s  [1] "CPS1985"  "Journals" "cps"      "cps2"     "cps_bkde"
186s  [6] "cps_lm"   "cps_rq"   "i"        "j_lm"     "x"       
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 24: remove
186s R> ###################################################
186s R> remove(x)
186s R> objects()
186s [1] "CPS1985"  "Journals" "cps"      "cps2"     "cps_bkde"
186s [6] "cps_lm"   "cps_rq"   "i"        "j_lm"    
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 25: log eval=FALSE
186s R> ###################################################
186s R> ## log(16, 2)
186s R> ## log(x = 16, 2)
186s R> ## log(16, base = 2)
186s R> ## log(base = 2, x = 16)
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 26: q eval=FALSE
186s R> ###################################################
186s R> ## q()
186s R> 
186s R> 
186s R> ###################################################
186s R> ### chunk number 27: apropos
186s R> ###################################################
186s R> apropos("help")
186s [1] "help"         "help.request" "help.search"  "help.start"  
186s R> 
186s R> 
186s R> 
186s BEGIN TEST Ch-LinearRegression.R
186s 
186s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
186s Copyright (C) 2025 The R Foundation for Statistical Computing
186s Platform: x86_64-pc-linux-gnu
186s 
186s R is free software and comes with ABSOLUTELY NO WARRANTY.
186s You are welcome to redistribute it under certain conditions.
186s Type 'license()' or 'licence()' for distribution details.
186s 
186s R is a collaborative project with many contributors.
186s Type 'contributors()' for more information and
186s 'citation()' on how to cite R or R packages in publications.
186s 
186s Type 'demo()' for some demos, 'help()' for on-line help, or
186s 'help.start()' for an HTML browser interface to help.
186s Type 'q()' to quit R.
186s 
186s > if(!requireNamespace("splines") ||
186s +    !requireNamespace("dynlm") ||
186s +    !requireNamespace("plm") ||
186s +    !requireNamespace("systemfit") ||
186s +    !requireNamespace("nlme")) q()
186s Loading required namespace: splines
186s Loading required namespace: dynlm
186s Loading required namespace: plm
187s Loading required namespace: systemfit
187s > 
187s > ###################################################
187s > ### chunk number 1: setup
187s > ###################################################
187s > options(prompt = "R> ", continue = "+  ", width = 64,
187s +   digits = 4, show.signif.stars = FALSE, useFancyQuotes = FALSE)
187s R> 
187s R> options(SweaveHooks = list(onefig =   function() {par(mfrow = c(1,1))},
187s +                             twofig =   function() {par(mfrow = c(1,2))},                           
187s +                             threefig = function() {par(mfrow = c(1,3))},
187s +                             fourfig =  function() {par(mfrow = c(2,2))},
187s +                             sixfig =   function() {par(mfrow = c(3,2))}))
187s R> 
187s R> library("AER")
187s Loading required package: car
187s Loading required package: carData
187s Loading required package: lmtest
187s Loading required package: zoo
187s 
187s Attaching package: 'zoo'
187s 
187s The following objects are masked from 'package:base':
187s 
187s     as.Date, as.Date.numeric
187s 
187s Loading required package: sandwich
187s Loading required package: survival
187s R> 
187s R> suppressWarnings(RNGversion("3.5.0"))
187s R> set.seed(1071)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 2: data-journals
187s R> ###################################################
187s R> data("Journals")
187s R> journals <- Journals[, c("subs", "price")]
187s R> journals$citeprice <- Journals$price/Journals$citations
187s R> summary(journals)
187s       subs          price        citeprice       
187s  Min.   :   2   Min.   :  20   Min.   : 0.00522  
187s  1st Qu.:  52   1st Qu.: 134   1st Qu.: 0.46449  
187s  Median : 122   Median : 282   Median : 1.32051  
187s  Mean   : 197   Mean   : 418   Mean   : 2.54846  
187s  3rd Qu.: 268   3rd Qu.: 541   3rd Qu.: 3.44017  
187s  Max.   :1098   Max.   :2120   Max.   :24.45946  
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 3: linreg-plot eval=FALSE
187s R> ###################################################
187s R> ## plot(log(subs) ~ log(citeprice), data = journals)
187s R> ## jour_lm <- lm(log(subs) ~ log(citeprice), data = journals)
187s R> ## abline(jour_lm)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 4: linreg-plot1
187s R> ###################################################
187s R> plot(log(subs) ~ log(citeprice), data = journals)
187s R> jour_lm <- lm(log(subs) ~ log(citeprice), data = journals)
187s R> abline(jour_lm)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 5: linreg-class
187s R> ###################################################
187s R> class(jour_lm)
187s [1] "lm"
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 6: linreg-names
187s R> ###################################################
187s R> names(jour_lm)
187s  [1] "coefficients"  "residuals"     "effects"      
187s  [4] "rank"          "fitted.values" "assign"       
187s  [7] "qr"            "df.residual"   "xlevels"      
187s [10] "call"          "terms"         "model"        
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 7: linreg-summary
187s R> ###################################################
187s R> summary(jour_lm)
187s 
187s Call:
187s lm(formula = log(subs) ~ log(citeprice), data = journals)
187s 
187s Residuals:
187s     Min      1Q  Median      3Q     Max 
187s -2.7248 -0.5361  0.0372  0.4662  1.8481 
187s 
187s Coefficients:
187s                Estimate Std. Error t value Pr(>|t|)
187s (Intercept)      4.7662     0.0559    85.2   <2e-16
187s log(citeprice)  -0.5331     0.0356   -15.0   <2e-16
187s 
187s Residual standard error: 0.75 on 178 degrees of freedom
187s Multiple R-squared:  0.557,	Adjusted R-squared:  0.555 
187s F-statistic:  224 on 1 and 178 DF,  p-value: <2e-16
187s 
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 8: linreg-summary
187s R> ###################################################
187s R> jour_slm <- summary(jour_lm)
187s R> class(jour_slm)
187s [1] "summary.lm"
187s R> names(jour_slm)
187s  [1] "call"          "terms"         "residuals"    
187s  [4] "coefficients"  "aliased"       "sigma"        
187s  [7] "df"            "r.squared"     "adj.r.squared"
187s [10] "fstatistic"    "cov.unscaled" 
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 9: linreg-coef
187s R> ###################################################
187s R> jour_slm$coefficients
187s                Estimate Std. Error t value   Pr(>|t|)
187s (Intercept)      4.7662    0.05591   85.25 2.954e-146
187s log(citeprice)  -0.5331    0.03561  -14.97  2.564e-33
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 10: linreg-anova
187s R> ###################################################
187s R> anova(jour_lm)
187s Analysis of Variance Table
187s 
187s Response: log(subs)
187s                 Df Sum Sq Mean Sq F value Pr(>F)
187s log(citeprice)   1    126   125.9     224 <2e-16
187s Residuals      178    100     0.6               
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 11: journals-coef
187s R> ###################################################
187s R> coef(jour_lm)
187s    (Intercept) log(citeprice) 
187s         4.7662        -0.5331 
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 12: journals-confint
187s R> ###################################################
187s R> confint(jour_lm, level = 0.95)
187s                  2.5 %  97.5 %
187s (Intercept)     4.6559  4.8765
187s log(citeprice) -0.6033 -0.4628
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 13: journals-predict
187s R> ###################################################
187s R> predict(jour_lm, newdata = data.frame(citeprice = 2.11),
187s +    interval = "confidence")
187s     fit   lwr   upr
187s 1 4.368 4.247 4.489
187s R> predict(jour_lm, newdata = data.frame(citeprice = 2.11), 
187s +    interval = "prediction")
187s     fit   lwr   upr
187s 1 4.368 2.884 5.853
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 14: predict-plot eval=FALSE
187s R> ###################################################
187s R> ## lciteprice <- seq(from = -6, to = 4, by = 0.25)
187s R> ## jour_pred <- predict(jour_lm, interval = "prediction",
187s R> ##   newdata = data.frame(citeprice = exp(lciteprice)))  
187s R> ## plot(log(subs) ~ log(citeprice), data = journals)
187s R> ## lines(jour_pred[, 1] ~ lciteprice, col = 1)    
187s R> ## lines(jour_pred[, 2] ~ lciteprice, col = 1, lty = 2)
187s R> ## lines(jour_pred[, 3] ~ lciteprice, col = 1, lty = 2)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 15: predict-plot1
187s R> ###################################################
187s R> lciteprice <- seq(from = -6, to = 4, by = 0.25)
187s R> jour_pred <- predict(jour_lm, interval = "prediction",
187s +    newdata = data.frame(citeprice = exp(lciteprice)))  
187s R> plot(log(subs) ~ log(citeprice), data = journals)
187s R> lines(jour_pred[, 1] ~ lciteprice, col = 1)    
187s R> lines(jour_pred[, 2] ~ lciteprice, col = 1, lty = 2)
187s R> lines(jour_pred[, 3] ~ lciteprice, col = 1, lty = 2)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 16: journals-plot eval=FALSE
187s R> ###################################################
187s R> ## par(mfrow = c(2, 2))
187s R> ## plot(jour_lm)
187s R> ## par(mfrow = c(1, 1))
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 17: journals-plot1
187s R> ###################################################
187s R> par(mfrow = c(2, 2))
187s R> plot(jour_lm)
187s R> par(mfrow = c(1, 1))
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 18: journal-lht
187s R> ###################################################
187s R> linearHypothesis(jour_lm, "log(citeprice) = -0.5")
187s 
187s Linear hypothesis test:
187s log(citeprice) = - 0.5
187s 
187s Model 1: restricted model
187s Model 2: log(subs) ~ log(citeprice)
187s 
187s   Res.Df RSS Df Sum of Sq    F Pr(>F)
187s 1    179 100                         
187s 2    178 100  1     0.484 0.86   0.35
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 19: CPS-data
187s R> ###################################################
187s R> data("CPS1988")
187s R> summary(CPS1988)
187s       wage         education      experience   ethnicity   
187s  Min.   :   50   Min.   : 0.0   Min.   :-4.0   cauc:25923  
187s  1st Qu.:  309   1st Qu.:12.0   1st Qu.: 8.0   afam: 2232  
187s  Median :  522   Median :12.0   Median :16.0               
187s  Mean   :  604   Mean   :13.1   Mean   :18.2               
187s  3rd Qu.:  783   3rd Qu.:15.0   3rd Qu.:27.0               
187s  Max.   :18777   Max.   :18.0   Max.   :63.0               
187s   smsa             region     parttime   
187s  no : 7223   northeast:6441   no :25631  
187s  yes:20932   midwest  :6863   yes: 2524  
187s              south    :8760              
187s              west     :6091              
187s                                          
187s                                          
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 20: CPS-base
187s R> ###################################################
187s R> cps_lm <- lm(log(wage) ~ experience + I(experience^2) +
187s +    education + ethnicity, data = CPS1988)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 21: CPS-visualization-unused eval=FALSE
187s R> ###################################################
187s R> ## ex <- 0:56
187s R> ## ed <- with(CPS1988, tapply(education, 
187s R> ##   list(ethnicity, experience), mean))[, as.character(ex)]
187s R> ## fm <- cps_lm
187s R> ## wago <- predict(fm, newdata = data.frame(experience = ex, 
187s R> ##   ethnicity = "cauc", education = as.numeric(ed["cauc",])))
187s R> ## wagb <- predict(fm, newdata = data.frame(experience = ex, 
187s R> ##   ethnicity = "afam", education = as.numeric(ed["afam",])))
187s R> ## plot(log(wage) ~ experience, data = CPS1988, pch = ".", 
187s R> ##   col = as.numeric(ethnicity))
187s R> ## lines(ex, wago)
187s R> ## lines(ex, wagb, col = 2)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 22: CPS-summary
187s R> ###################################################
187s R> summary(cps_lm)
187s 
187s Call:
187s lm(formula = log(wage) ~ experience + I(experience^2) + education + 
187s     ethnicity, data = CPS1988)
187s 
187s Residuals:
187s    Min     1Q Median     3Q    Max 
187s -2.943 -0.316  0.058  0.376  4.383 
187s 
187s Coefficients:
187s                  Estimate Std. Error t value Pr(>|t|)
187s (Intercept)      4.321395   0.019174   225.4   <2e-16
187s experience       0.077473   0.000880    88.0   <2e-16
187s I(experience^2) -0.001316   0.000019   -69.3   <2e-16
187s education        0.085673   0.001272    67.3   <2e-16
187s ethnicityafam   -0.243364   0.012918   -18.8   <2e-16
187s 
187s Residual standard error: 0.584 on 28150 degrees of freedom
187s Multiple R-squared:  0.335,	Adjusted R-squared:  0.335 
187s F-statistic: 3.54e+03 on 4 and 28150 DF,  p-value: <2e-16
187s 
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 23: CPS-noeth
187s R> ###################################################
187s R> cps_noeth <- lm(log(wage) ~ experience + I(experience^2) +
187s +    education, data = CPS1988)
187s R> anova(cps_noeth, cps_lm)
187s Analysis of Variance Table
187s 
187s Model 1: log(wage) ~ experience + I(experience^2) + education
187s Model 2: log(wage) ~ experience + I(experience^2) + education + ethnicity
187s   Res.Df  RSS Df Sum of Sq   F Pr(>F)
187s 1  28151 9720                        
187s 2  28150 9599  1       121 355 <2e-16
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 24: CPS-anova
187s R> ###################################################
187s R> anova(cps_lm)
187s Analysis of Variance Table
187s 
187s Response: log(wage)
187s                    Df Sum Sq Mean Sq F value Pr(>F)
187s experience          1    840     840    2462 <2e-16
187s I(experience^2)     1   2249    2249    6597 <2e-16
187s education           1   1620    1620    4750 <2e-16
187s ethnicity           1    121     121     355 <2e-16
187s Residuals       28150   9599       0               
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 25: CPS-noeth2 eval=FALSE
187s R> ###################################################
187s R> ## cps_noeth <- update(cps_lm, formula = . ~ . - ethnicity)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 26: CPS-waldtest
187s R> ###################################################
187s R> waldtest(cps_lm, . ~ . - ethnicity)
187s Wald test
187s 
187s Model 1: log(wage) ~ experience + I(experience^2) + education + ethnicity
187s Model 2: log(wage) ~ experience + I(experience^2) + education
187s   Res.Df Df   F Pr(>F)
187s 1  28150              
187s 2  28151 -1 355 <2e-16
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 27: CPS-spline
187s R> ###################################################
187s R> library("splines")
187s R> cps_plm <- lm(log(wage) ~ bs(experience, df = 5) +
187s +    education + ethnicity, data = CPS1988)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 28: CPS-spline-summary eval=FALSE
187s R> ###################################################
187s R> ## summary(cps_plm)
187s R> 
187s R> 
187s R> ###################################################
187s R> ### chunk number 29: CPS-BIC
187s R> ###################################################
187s R> cps_bs <- lapply(3:10, function(i) lm(log(wage) ~
187s +    bs(experience, df = i) + education + ethnicity,
187s +    data = CPS1988))
188s R> structure(sapply(cps_bs, AIC, k = log(nrow(CPS1988))),
188s +    .Names = 3:10)
188s     3     4     5     6     7     8     9    10 
188s 49205 48836 48794 48795 48801 48797 48799 48802 
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 30: plm-plot eval=FALSE
188s R> ###################################################
188s R> ## cps <- data.frame(experience = -2:60, education =
188s R> ##   with(CPS1988, mean(education[ethnicity == "cauc"])),
188s R> ##   ethnicity = "cauc")
188s R> ## cps$yhat1 <- predict(cps_lm, newdata = cps)
188s R> ## cps$yhat2 <- predict(cps_plm, newdata = cps)
188s R> ## 
188s R> ## plot(log(wage) ~ jitter(experience, factor = 3), pch = 19,
188s R> ##   col = rgb(0.5, 0.5, 0.5, alpha = 0.02), data = CPS1988)
188s R> ## lines(yhat1 ~ experience, data = cps, lty = 2)
188s R> ## lines(yhat2 ~ experience, data = cps)
188s R> ## legend("topleft", c("quadratic", "spline"), lty = c(2,1),
188s R> ##   bty = "n")
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 31: plm-plot1
188s R> ###################################################
188s R> cps <- data.frame(experience = -2:60, education =
188s +    with(CPS1988, mean(education[ethnicity == "cauc"])),
188s +    ethnicity = "cauc")
188s R> cps$yhat1 <- predict(cps_lm, newdata = cps)
188s R> cps$yhat2 <- predict(cps_plm, newdata = cps)
188s R> 
188s R> plot(log(wage) ~ jitter(experience, factor = 3), pch = 19,
188s +    col = rgb(0.5, 0.5, 0.5, alpha = 0.02), data = CPS1988)
188s R> lines(yhat1 ~ experience, data = cps, lty = 2)
188s R> lines(yhat2 ~ experience, data = cps)
188s R> legend("topleft", c("quadratic", "spline"), lty = c(2,1),
188s +    bty = "n")
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 32: CPS-int
188s R> ###################################################
188s R> cps_int <- lm(log(wage) ~ experience + I(experience^2) +
188s +    education * ethnicity, data = CPS1988)
188s R> coeftest(cps_int)
188s 
188s t test of coefficients:
188s 
188s                          Estimate Std. Error t value Pr(>|t|)
188s (Intercept)              4.313059   0.019590  220.17   <2e-16
188s experience               0.077520   0.000880   88.06   <2e-16
188s I(experience^2)         -0.001318   0.000019  -69.34   <2e-16
188s education                0.086312   0.001309   65.94   <2e-16
188s ethnicityafam           -0.123887   0.059026   -2.10    0.036
188s education:ethnicityafam -0.009648   0.004651   -2.07    0.038
188s 
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 33: CPS-int2 eval=FALSE
188s R> ###################################################
188s R> ## cps_int <- lm(log(wage) ~ experience + I(experience^2) +
188s R> ##   education + ethnicity + education:ethnicity,
188s R> ##   data = CPS1988)
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 34: CPS-sep
188s R> ###################################################
188s R> cps_sep <- lm(log(wage) ~ ethnicity /
188s +    (experience + I(experience^2) + education) - 1,
188s +    data = CPS1988)
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 35: CPS-sep-coef
188s R> ###################################################
188s R> cps_sep_cf <- matrix(coef(cps_sep), nrow = 2)
188s R> rownames(cps_sep_cf) <- levels(CPS1988$ethnicity)
188s R> colnames(cps_sep_cf) <- names(coef(cps_lm))[1:4]
188s R> cps_sep_cf
188s      (Intercept) experience I(experience^2) education
188s cauc       4.310    0.07923      -0.0013597   0.08575
188s afam       4.159    0.06190      -0.0009415   0.08654
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 36: CPS-sep-anova
188s R> ###################################################
188s R> anova(cps_sep, cps_lm)
188s Analysis of Variance Table
188s 
188s Model 1: log(wage) ~ ethnicity/(experience + I(experience^2) + education) - 
188s     1
188s Model 2: log(wage) ~ experience + I(experience^2) + education + ethnicity
188s   Res.Df  RSS Df Sum of Sq    F  Pr(>F)
188s 1  28147 9582                          
188s 2  28150 9599 -3     -16.8 16.5 1.1e-10
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 37: CPS-sep-visualization-unused eval=FALSE
188s R> ###################################################
188s R> ## ex <- 0:56
188s R> ## ed <- with(CPS1988, tapply(education, list(ethnicity, 
188s R> ##   experience), mean))[, as.character(ex)]
188s R> ## fm <- cps_lm
188s R> ## wago <- predict(fm, newdata = data.frame(experience = ex, 
188s R> ##   ethnicity = "cauc", education = as.numeric(ed["cauc",])))
188s R> ## wagb <- predict(fm, newdata = data.frame(experience = ex, 
188s R> ##   ethnicity = "afam", education = as.numeric(ed["afam",])))
188s R> ## plot(log(wage) ~ jitter(experience, factor = 2), 
188s R> ##   data = CPS1988, pch = ".", col = as.numeric(ethnicity))
188s R> ## 
188s R> ## 
188s R> ## plot(log(wage) ~ as.factor(experience), data = CPS1988, 
188s R> ##   pch = ".")
188s R> ## lines(ex, wago, lwd = 2)
188s R> ## lines(ex, wagb, col = 2, lwd = 2)
188s R> ## fm <- cps_sep
188s R> ## wago <- predict(fm, newdata = data.frame(experience = ex, 
188s R> ##   ethnicity = "cauc", education = as.numeric(ed["cauc",])))
188s R> ## wagb <- predict(fm, newdata = data.frame(experience = ex, 
188s R> ##   ethnicity = "afam", education = as.numeric(ed["afam",])))
188s R> ## lines(ex, wago, lty = 2, lwd = 2)
188s R> ## lines(ex, wagb, col = 2, lty = 2, lwd = 2)
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 38: CPS-region
188s R> ###################################################
188s R> CPS1988$region <- relevel(CPS1988$region, ref = "south")
188s R> cps_region <- lm(log(wage) ~ ethnicity + education +
188s +    experience + I(experience^2) + region, data = CPS1988)
188s R> coef(cps_region)
188s     (Intercept)   ethnicityafam       education      experience 
188s        4.283606       -0.225679        0.084672        0.077656 
188s I(experience^2) regionnortheast   regionmidwest      regionwest 
188s       -0.001323        0.131920        0.043789        0.040327 
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 39: wls1
188s R> ###################################################
188s R> jour_wls1 <- lm(log(subs) ~ log(citeprice), data = journals,
188s +    weights = 1/citeprice^2)
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 40: wls2
188s R> ###################################################
188s R> jour_wls2 <- lm(log(subs) ~ log(citeprice), data = journals,
188s +    weights = 1/citeprice)
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 41: journals-wls1 eval=FALSE
188s R> ###################################################
188s R> ## plot(log(subs) ~ log(citeprice), data = journals)
188s R> ## abline(jour_lm)
188s R> ## abline(jour_wls1, lwd = 2, lty = 2)
188s R> ## abline(jour_wls2, lwd = 2, lty = 3)
188s R> ## legend("bottomleft", c("OLS", "WLS1", "WLS2"),
188s R> ##   lty = 1:3, lwd = 2, bty = "n")
188s R> 
188s R> 
188s R> ###################################################
188s R> ### chunk number 42: journals-wls11
188s R> ###################################################
188s R> plot(log(subs) ~ log(citeprice), data = journals)
189s R> abline(jour_lm)
189s R> abline(jour_wls1, lwd = 2, lty = 2)
189s R> abline(jour_wls2, lwd = 2, lty = 3)
189s R> legend("bottomleft", c("OLS", "WLS1", "WLS2"),
189s +    lty = 1:3, lwd = 2, bty = "n")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 43: fgls1
189s R> ###################################################
189s R> auxreg <- lm(log(residuals(jour_lm)^2) ~ log(citeprice),
189s +    data = journals)
189s R> jour_fgls1 <- lm(log(subs) ~ log(citeprice), 
189s +    weights = 1/exp(fitted(auxreg)), data = journals)
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 44: fgls2
189s R> ###################################################
189s R> gamma2i <- coef(auxreg)[2]
189s R> gamma2 <- 0
189s R> while(abs((gamma2i - gamma2)/gamma2) > 1e-7) {
189s +    gamma2 <- gamma2i
189s +    fglsi <- lm(log(subs) ~ log(citeprice), data = journals, 
189s +      weights = 1/citeprice^gamma2)
189s +    gamma2i <- coef(lm(log(residuals(fglsi)^2) ~
189s +      log(citeprice), data = journals))[2]
189s +  }
189s R> jour_fgls2 <- lm(log(subs) ~ log(citeprice), data = journals,
189s +    weights = 1/citeprice^gamma2)
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 45: fgls2-coef
189s R> ###################################################
189s R> coef(jour_fgls2)
189s    (Intercept) log(citeprice) 
189s         4.7758        -0.5008 
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 46: journals-fgls
189s R> ###################################################
189s R> plot(log(subs) ~ log(citeprice), data = journals)
189s R> abline(jour_lm)
189s R> abline(jour_fgls2, lty = 2, lwd = 2)
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 47: usmacro-plot eval=FALSE
189s R> ###################################################
189s R> ## data("USMacroG")
189s R> ## plot(USMacroG[, c("dpi", "consumption")], lty = c(3, 1),
189s R> ##   plot.type = "single", ylab = "")
189s R> ## legend("topleft", legend = c("income", "consumption"),
189s R> ##   lty = c(3, 1), bty = "n")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 48: usmacro-plot1
189s R> ###################################################
189s R> data("USMacroG")
189s R> plot(USMacroG[, c("dpi", "consumption")], lty = c(3, 1),
189s +    plot.type = "single", ylab = "")
189s R> legend("topleft", legend = c("income", "consumption"),
189s +    lty = c(3, 1), bty = "n")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 49: usmacro-fit
189s R> ###################################################
189s R> library("dynlm")
189s R> cons_lm1 <- dynlm(consumption ~ dpi + L(dpi), data = USMacroG)
189s R> cons_lm2 <- dynlm(consumption ~ dpi + L(consumption), 
189s +    data = USMacroG)
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 50: usmacro-summary1
189s R> ###################################################
189s R> summary(cons_lm1)
189s 
189s Time series regression with "ts" data:
189s Start = 1950(2), End = 2000(4)
189s 
189s Call:
189s dynlm(formula = consumption ~ dpi + L(dpi), data = USMacroG)
189s 
189s Residuals:
189s    Min     1Q Median     3Q    Max 
189s -190.0  -56.7    1.6   49.9  323.9 
189s 
189s Coefficients:
189s             Estimate Std. Error t value Pr(>|t|)
189s (Intercept) -81.0796    14.5081   -5.59  7.4e-08
189s dpi           0.8912     0.2063    4.32  2.4e-05
189s L(dpi)        0.0309     0.2075    0.15     0.88
189s 
189s Residual standard error: 87.6 on 200 degrees of freedom
189s Multiple R-squared:  0.996,	Adjusted R-squared:  0.996 
189s F-statistic: 2.79e+04 on 2 and 200 DF,  p-value: <2e-16
189s 
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 51: usmacro-summary2
189s R> ###################################################
189s R> summary(cons_lm2)
189s 
189s Time series regression with "ts" data:
189s Start = 1950(2), End = 2000(4)
189s 
189s Call:
189s dynlm(formula = consumption ~ dpi + L(consumption), data = USMacroG)
189s 
189s Residuals:
189s     Min      1Q  Median      3Q     Max 
189s -101.30   -9.67    1.14   12.69   45.32 
189s 
189s Coefficients:
189s                Estimate Std. Error t value Pr(>|t|)
189s (Intercept)     0.53522    3.84517    0.14     0.89
189s dpi            -0.00406    0.01663   -0.24     0.81
189s L(consumption)  1.01311    0.01816   55.79   <2e-16
189s 
189s Residual standard error: 21.5 on 200 degrees of freedom
189s Multiple R-squared:     1,	Adjusted R-squared:     1 
189s F-statistic: 4.63e+05 on 2 and 200 DF,  p-value: <2e-16
189s 
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 52: dynlm-plot eval=FALSE
189s R> ###################################################
189s R> ## plot(merge(as.zoo(USMacroG[,"consumption"]), fitted(cons_lm1),
189s R> ##   fitted(cons_lm2), 0, residuals(cons_lm1),
189s R> ##   residuals(cons_lm2)), screens = rep(1:2, c(3, 3)),
189s R> ##   lty = rep(1:3, 2), ylab = c("Fitted values", "Residuals"),
189s R> ##   xlab = "Time", main = "")
189s R> ## legend(0.05, 0.95, c("observed", "cons_lm1", "cons_lm2"), 
189s R> ##   lty = 1:3, bty = "n")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 53: dynlm-plot1
189s R> ###################################################
189s R> plot(merge(as.zoo(USMacroG[,"consumption"]), fitted(cons_lm1),
189s +    fitted(cons_lm2), 0, residuals(cons_lm1),
189s +    residuals(cons_lm2)), screens = rep(1:2, c(3, 3)),
189s +    lty = rep(1:3, 2), ylab = c("Fitted values", "Residuals"),
189s +    xlab = "Time", main = "")
189s R> legend(0.05, 0.95, c("observed", "cons_lm1", "cons_lm2"), 
189s +    lty = 1:3, bty = "n")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 54: encompassing1
189s R> ###################################################
189s R> cons_lmE <- dynlm(consumption ~ dpi + L(dpi) +
189s +    L(consumption), data = USMacroG)
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 55: encompassing2
189s R> ###################################################
189s R> anova(cons_lm1, cons_lmE, cons_lm2)
189s Analysis of Variance Table
189s 
189s Model 1: consumption ~ dpi + L(dpi)
189s Model 2: consumption ~ dpi + L(dpi) + L(consumption)
189s Model 3: consumption ~ dpi + L(consumption)
189s   Res.Df     RSS Df Sum of Sq      F  Pr(>F)
189s 1    200 1534001                            
189s 2    199   73550  1   1460451 3951.4 < 2e-16
189s 3    200   92644 -1    -19094   51.7 1.3e-11
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 56: encompassing3
189s R> ###################################################
189s R> encomptest(cons_lm1, cons_lm2)
189s Encompassing test
189s 
189s Model 1: consumption ~ dpi + L(dpi)
189s Model 2: consumption ~ dpi + L(consumption)
189s Model E: consumption ~ dpi + L(dpi) + L(consumption)
189s           Res.Df Df      F  Pr(>F)
189s M1 vs. ME    199 -1 3951.4 < 2e-16
189s M2 vs. ME    199 -1   51.7 1.3e-11
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 57: pdata.frame
189s R> ###################################################
189s R> data("Grunfeld", package = "AER")
189s R> library("plm")
189s R> gr <- subset(Grunfeld, firm %in% c("General Electric",
189s +    "General Motors", "IBM"))
189s R> pgr <- pdata.frame(gr, index = c("firm", "year"))
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 58: plm-pool
189s R> ###################################################
189s R> gr_pool <- plm(invest ~ value + capital, data = pgr, 
189s +    model = "pooling")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 59: plm-FE
189s R> ###################################################
189s R> gr_fe <- plm(invest ~ value + capital, data = pgr, 
189s +    model = "within")
189s R> summary(gr_fe)
189s Oneway (individual) effect Within Model
189s 
189s Call:
189s plm(formula = invest ~ value + capital, data = pgr, model = "within")
189s 
189s Balanced Panel: n = 3, T = 20, N = 60
189s 
189s Residuals:
189s    Min. 1st Qu.  Median 3rd Qu.    Max. 
189s -167.33  -26.14    2.09   26.84  201.68 
189s 
189s Coefficients:
189s         Estimate Std. Error t-value Pr(>|t|)
189s value     0.1049     0.0163    6.42  3.3e-08
189s capital   0.3453     0.0244   14.16  < 2e-16
189s 
189s Total Sum of Squares:    1890000
189s Residual Sum of Squares: 244000
189s R-Squared:      0.871
189s Adj. R-Squared: 0.861
189s F-statistic: 185.407 on 2 and 55 DF, p-value: <2e-16
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 60: plm-pFtest
189s R> ###################################################
189s R> pFtest(gr_fe, gr_pool)
189s 
189s 	F test for individual effects
189s 
189s data:  invest ~ value + capital
189s F = 57, df1 = 2, df2 = 55, p-value = 4e-14
189s alternative hypothesis: significant effects
189s 
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 61: plm-RE
189s R> ###################################################
189s R> gr_re <- plm(invest ~ value + capital, data = pgr, 
189s +    model = "random", random.method = "walhus")
189s R> summary(gr_re)
189s Oneway (individual) effect Random Effect Model 
189s    (Wallace-Hussain's transformation)
189s 
189s Call:
189s plm(formula = invest ~ value + capital, data = pgr, model = "random", 
189s     random.method = "walhus")
189s 
189s Balanced Panel: n = 3, T = 20, N = 60
189s 
189s Effects:
189s                  var std.dev share
189s idiosyncratic 4389.3    66.3  0.35
189s individual    8079.7    89.9  0.65
189s theta: 0.837
189s 
189s Residuals:
189s    Min. 1st Qu.  Median 3rd Qu.    Max. 
189s -187.40  -32.92    6.96   31.43  210.20 
189s 
189s Coefficients:
189s              Estimate Std. Error z-value Pr(>|z|)
189s (Intercept) -109.9766    61.7014   -1.78    0.075
189s value          0.1043     0.0150    6.95  3.6e-12
189s capital        0.3448     0.0245   14.06  < 2e-16
189s 
189s Total Sum of Squares:    1990000
189s Residual Sum of Squares: 258000
189s R-Squared:      0.87
189s Adj. R-Squared: 0.866
189s Chisq: 383.089 on 2 DF, p-value: <2e-16
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 62: plm-plmtest
189s R> ###################################################
189s R> plmtest(gr_pool)
189s 
189s 	Lagrange Multiplier Test - (Honda)
189s 
189s data:  invest ~ value + capital
189s normal = 15, p-value <2e-16
189s alternative hypothesis: significant effects
189s 
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 63: plm-phtest
189s R> ###################################################
189s R> phtest(gr_re, gr_fe)
189s 
189s 	Hausman Test
189s 
189s data:  invest ~ value + capital
189s chisq = 0.04, df = 2, p-value = 1
189s alternative hypothesis: one model is inconsistent
189s 
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 64: EmplUK-data
189s R> ###################################################
189s R> data("EmplUK", package = "plm")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 65: plm-AB
189s R> ###################################################
189s R> empl_ab <- pgmm(log(emp) ~ lag(log(emp), 1:2) + lag(log(wage), 0:1) +
189s +    log(capital) + lag(log(output), 0:1) | lag(log(emp), 2:99),
189s +    data = EmplUK, index = c("firm", "year"),
189s +    effect = "twoways", model = "twosteps")
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 66: plm-AB-summary
189s R> ###################################################
189s R> summary(empl_ab, robust = FALSE)     
189s Twoways effects Two-steps model Difference GMM 
189s 
189s Call:
189s pgmm(formula = log(emp) ~ lag(log(emp), 1:2) + lag(log(wage), 
189s     0:1) + log(capital) + lag(log(output), 0:1) | lag(log(emp), 
189s     2:99), data = EmplUK, effect = "twoways", model = "twosteps", 
189s     index = c("firm", "year"))
189s 
189s Unbalanced Panel: n = 140, T = 7-9, N = 1031
189s 
189s Number of Observations Used: 611
189s Residuals:
189s      Min.   1st Qu.    Median      Mean   3rd Qu.      Max. 
189s -0.619068 -0.025568  0.000000 -0.000134  0.033201  0.641027 
189s 
189s Coefficients:
189s                        Estimate Std. Error z-value Pr(>|z|)
189s lag(log(emp), 1:2)1      0.4742     0.0853    5.56  2.7e-08
189s lag(log(emp), 1:2)2     -0.0530     0.0273   -1.94  0.05222
189s lag(log(wage), 0:1)0    -0.5132     0.0493  -10.40  < 2e-16
189s lag(log(wage), 0:1)1     0.2246     0.0801    2.81  0.00502
189s log(capital)             0.2927     0.0395    7.42  1.2e-13
189s lag(log(output), 0:1)0   0.6098     0.1085    5.62  1.9e-08
189s lag(log(output), 0:1)1  -0.4464     0.1248   -3.58  0.00035
189s 
189s Sargan test: chisq(25) = 30.11 (p-value = 0.22)
189s Autocorrelation test (1): normal = -2.428 (p-value = 0.0152)
189s Autocorrelation test (2): normal = -0.3325 (p-value = 0.739)
189s Wald test for coefficients: chisq(7) = 372 (p-value = <2e-16)
189s Wald test for time dummies: chisq(6) = 26.9 (p-value = 0.000151)
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 67: systemfit
189s R> ###################################################
189s R> library("systemfit")
189s Loading required package: Matrix
189s 
189s Please cite the 'systemfit' package as:
189s Arne Henningsen and Jeff D. Hamann (2007). systemfit: A Package for Estimating Systems of Simultaneous Equations in R. Journal of Statistical Software 23(4), 1-40. http://www.jstatsoft.org/v23/i04/.
189s 
189s If you have questions, suggestions, or comments regarding the 'systemfit' package, please use a forum or 'tracker' at systemfit's R-Forge site:
189s https://r-forge.r-project.org/projects/systemfit/
189s R> gr2 <- subset(Grunfeld, firm %in% c("Chrysler", "IBM"))
189s R> pgr2 <- pdata.frame(gr2, c("firm", "year"))
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 68: SUR
189s R> ###################################################
189s R> gr_sur <- systemfit(invest ~ value + capital,
189s +    method = "SUR", data = pgr2)
189s R> summary(gr_sur, residCov = FALSE, equations = FALSE)
189s 
189s systemfit results 
189s method: SUR 
189s 
189s         N DF  SSR detRCov OLS-R2 McElroy-R2
189s system 40 34 4114   11022  0.929      0.927
189s 
189s           N DF  SSR   MSE  RMSE    R2 Adj R2
189s Chrysler 20 17 3002 176.6 13.29 0.913  0.903
189s IBM      20 17 1112  65.4  8.09 0.952  0.946
189s 
189s 
189s Coefficients:
189s                      Estimate Std. Error t value Pr(>|t|)
189s Chrysler_(Intercept)  -5.7031    13.2774   -0.43  0.67293
189s Chrysler_value         0.0780     0.0196    3.98  0.00096
189s Chrysler_capital       0.3115     0.0287   10.85  4.6e-09
189s IBM_(Intercept)       -8.0908     4.5216   -1.79  0.09139
189s IBM_value              0.1272     0.0306    4.16  0.00066
189s IBM_capital            0.0966     0.0983    0.98  0.33951
189s R> 
189s R> 
189s R> ###################################################
189s R> ### chunk number 69: nlme eval=FALSE
189s R> ###################################################
189s R> ## library("nlme")
189s R> ## g1 <- subset(Grunfeld, firm == "Westinghouse")
189s R> ## gls(invest ~ value + capital, data = g1, correlation = corAR1())
189s R> 
189s R> 
189s R> 
189s BEGIN TEST Ch-Microeconometrics.R
189s 
189s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
189s Copyright (C) 2025 The R Foundation for Statistical Computing
189s Platform: x86_64-pc-linux-gnu
189s 
189s R is free software and comes with ABSOLUTELY NO WARRANTY.
189s You are welcome to redistribute it under certain conditions.
189s Type 'license()' or 'licence()' for distribution details.
189s 
189s R is a collaborative project with many contributors.
189s Type 'contributors()' for more information and
189s 'citation()' on how to cite R or R packages in publications.
189s 
189s Type 'demo()' for some demos, 'help()' for on-line help, or
189s 'help.start()' for an HTML browser interface to help.
189s Type 'q()' to quit R.
189s 
189s > if(!requireNamespace("ROCR") ||
189s +    !requireNamespace("MASS") ||
189s +    !requireNamespace("pscl") ||
189s +    !requireNamespace("np") ||
189s +    !requireNamespace("nnet")) q()
189s Loading required namespace: ROCR
189s Loading required namespace: MASS
189s Loading required namespace: pscl
189s Loading required namespace: np
189s Failed with error:  'there is no package called 'np''
189s BEGIN TEST Ch-Programming.R
191s 
191s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
191s Copyright (C) 2025 The R Foundation for Statistical Computing
191s Platform: x86_64-pc-linux-gnu
191s 
191s R is free software and comes with ABSOLUTELY NO WARRANTY.
191s You are welcome to redistribute it under certain conditions.
191s Type 'license()' or 'licence()' for distribution details.
191s 
191s R is a collaborative project with many contributors.
191s Type 'contributors()' for more information and
191s 'citation()' on how to cite R or R packages in publications.
191s 
191s Type 'demo()' for some demos, 'help()' for on-line help, or
191s 'help.start()' for an HTML browser interface to help.
191s Type 'q()' to quit R.
191s 
191s Loading required namespace: lattice
191s > if(!requireNamespace("lattice") || !requireNamespace("boot")) q()
191s > 
191s > ###################################################
191s > ### chunk number 1: setup
191s > ###################################################
191s > options(prompt = "R> ", continue = "+  ", width = 64,
191s +   digits = 4, show.signif.stars = FALSE, useFancyQuotes = FALSE)
191s R> 
191s R> options(SweaveHooks = list(onefig =   function() {par(mfrow = c(1,1))},
191s +                             twofig =   function() {par(mfrow = c(1,2))},                           
191s +                             threefig = function() {par(mfrow = c(1,3))},
191s +                             fourfig =  function() {par(mfrow = c(2,2))},
191s +                             sixfig =   function() {par(mfrow = c(3,2))}))
191s R> 
191s R> library("AER")
191s R> 
191s R> suppressWarnings(RNGversion("3.5.0"))
191s R> set.seed(1071)
191s R> 
191s R> 
191s R> ###################################################
191s R> ### chunk number 2: DGP
191s R> ###################################################
191s R> dgp <- function(nobs = 15, model = c("trend", "dynamic"),
191s +    corr = 0, coef = c(0.25, -0.75), sd = 1)
191s +  {
191s +    model <- match.arg(model)
191s +    coef <- rep(coef, length.out = 2)
191s +  
191s +    err <- as.vector(filter(rnorm(nobs, sd = sd), corr,
191s +      method = "recursive"))
191s +    if(model == "trend") {
191s +      x <- 1:nobs
191s +      y <- coef[1] + coef[2] * x + err
191s +    } else {
191s +      y <- rep(NA, nobs)
191s +      y[1] <- coef[1] + err[1]
191s +      for(i in 2:nobs)
191s +        y[i] <- coef[1] + coef[2] * y[i-1] + err[i]
191s +      x <- c(0, y[1:(nobs-1)])
191s +    }
191s +    return(data.frame(y = y, x = x))
191s +  }
191s R> 
191s R> 
191s R> ###################################################
191s R> ### chunk number 3: simpower
191s R> ###################################################
191s R> simpower <- function(nrep = 100, size = 0.05, ...)
191s +  {
191s +    pval <- matrix(rep(NA, 2 * nrep), ncol = 2)
191s +    colnames(pval) <- c("dwtest", "bgtest")
191s +    for(i in 1:nrep) {
191s +      dat <- dgp(...)
191s +      pval[i,1] <- dwtest(y ~ x, data = dat,
191s +        alternative = "two.sided")$p.value
191s +      pval[i,2] <- bgtest(y ~ x, data = dat)$p.value
191s +    }
191s +    return(colMeans(pval < size))
191s +  }
191s R> 
191s R> 
191s R> ###################################################
191s R> ### chunk number 4: simulation-function
191s R> ###################################################
191s R> simulation <- function(corr = c(0, 0.2, 0.4, 0.6, 0.8,
191s +    0.9, 0.95, 0.99), nobs = c(15, 30, 50),
191s +    model = c("trend", "dynamic"), ...)
191s +  {
191s +    prs <- expand.grid(corr = corr, nobs = nobs, model = model)
191s +    nprs <- nrow(prs)
191s +  
191s +    pow <- matrix(rep(NA, 2 * nprs), ncol = 2)
191s +    for(i in 1:nprs) pow[i,] <- simpower(corr = prs[i,1],
191s +      nobs = prs[i,2], model = as.character(prs[i,3]), ...)
191s +  
191s +    rval <- rbind(prs, prs)
191s +    rval$test <- factor(rep(1:2, c(nprs, nprs)),
191s +      labels = c("dwtest", "bgtest"))
191s +    rval$power <- c(pow[,1], pow[,2])
191s +    rval$nobs <- factor(rval$nobs)
191s +    return(rval)
191s +  }
191s R> 
191s R> 
191s R> ###################################################
191s R> ### chunk number 5: simulation
191s R> ###################################################
191s R> set.seed(123)
191s R> psim <- simulation()
191s Loading required namespace: boot
191s Loading required package: car
191s Loading required package: carData
191s Loading required package: lmtest
191s Loading required package: zoo
191s 
191s Attaching package: 'zoo'
191s 
191s The following objects are masked from 'package:base':
191s 
191s     as.Date, as.Date.numeric
191s 
191s Loading required package: sandwich
191s Loading required package: survival
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 6: simulation-table
198s R> ###################################################
198s R> tab <- xtabs(power ~ corr + test + model + nobs, data = psim)
198s 
198s Attaching package: 'boot'
198s 
198s The following object is masked from 'package:lattice':
198s 
198s     melanoma
198s 
198s R> ftable(tab, row.vars = c("model", "nobs", "test"),
198s +    col.vars = "corr")
198s                     corr    0  0.2  0.4  0.6  0.8  0.9 0.95 0.99
198s model   nobs test                                               
198s trend   15   dwtest      0.05 0.10 0.21 0.36 0.55 0.65 0.66 0.62
198s              bgtest      0.07 0.05 0.05 0.10 0.30 0.40 0.41 0.31
198s         30   dwtest      0.09 0.20 0.57 0.80 0.96 1.00 0.96 0.98
198s              bgtest      0.09 0.09 0.37 0.69 0.93 0.99 0.94 0.93
198s         50   dwtest      0.03 0.31 0.76 0.99 1.00 1.00 1.00 1.00
198s              bgtest      0.05 0.23 0.63 0.95 1.00 1.00 1.00 1.00
198s dynamic 15   dwtest      0.02 0.01 0.00 0.00 0.01 0.03 0.01 0.00
198s              bgtest      0.07 0.04 0.01 0.09 0.14 0.21 0.17 0.26
198s         30   dwtest      0.00 0.01 0.01 0.06 0.00 0.03 0.03 0.19
198s              bgtest      0.05 0.05 0.18 0.39 0.52 0.63 0.64 0.74
198s         50   dwtest      0.02 0.02 0.01 0.03 0.03 0.15 0.39 0.56
198s              bgtest      0.05 0.10 0.36 0.72 0.91 0.90 0.93 0.91
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 7: simulation-visualization
198s R> ###################################################
198s R> library("lattice")
198s R> xyplot(power ~ corr | model + nobs, groups = ~ test,
198s +    data = psim, type = "b")
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 8: simulation-visualization1
198s R> ###################################################
198s R> library("lattice")
198s R> trellis.par.set(theme = canonical.theme(color = FALSE))
198s R> print(xyplot(power ~ corr | model + nobs, groups = ~ test, data = psim, type = "b"))
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 9: journals-lm
198s R> ###################################################
198s R> data("Journals")
198s R> journals <- Journals[, c("subs", "price")]
198s R> journals$citeprice <- Journals$price/Journals$citations
198s R> jour_lm <- lm(log(subs) ~ log(citeprice), data = journals)
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 10: journals-residuals-based-resampling-unused eval=FALSE
198s R> ###################################################
198s R> ## refit <- function(data, i) {
198s R> ##   d <- data
198s R> ##   d$subs <- exp(d$fitted + d$res[i])
198s R> ##   coef(lm(log(subs) ~ log(citeprice), data = d))
198s R> ## }
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 11: journals-case-based-resampling
198s R> ###################################################
198s R> refit <- function(data, i)
198s +    coef(lm(log(subs) ~ log(citeprice), data = data[i,]))
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 12: journals-boot
198s R> ###################################################
198s R> library("boot")
198s R> set.seed(123)
198s R> jour_boot <- boot(journals, refit, R = 999)
198s The following object is masked from 'package:survival':
198s 
198s     aml
198s 
198s The following object is masked from 'package:car':
198s 
198s     logit
198s 
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 13: journals-boot-print
198s R> ###################################################
198s R> jour_boot
198s 
198s ORDINARY NONPARAMETRIC BOOTSTRAP
198s 
198s 
198s Call:
198s boot(data = journals, statistic = refit, R = 999)
198s 
198s 
198s Bootstrap Statistics :
198s     original     bias    std. error
198s t1*   4.7662 -0.0010560     0.05545
198s t2*  -0.5331 -0.0001606     0.03304
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 14: journals-lm-coeftest
198s R> ###################################################
198s R> coeftest(jour_lm)
198s 
198s t test of coefficients:
198s 
198s                Estimate Std. Error t value Pr(>|t|)
198s (Intercept)      4.7662     0.0559    85.2   <2e-16
198s log(citeprice)  -0.5331     0.0356   -15.0   <2e-16
198s 
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 15: journals-boot-ci
198s R> ###################################################
198s R> boot.ci(jour_boot, index = 2, type = "basic")
198s BOOTSTRAP CONFIDENCE INTERVAL CALCULATIONS
198s Based on 999 bootstrap replicates
198s 
198s CALL : 
198s boot.ci(boot.out = jour_boot, type = "basic", index = 2)
198s 
198s Intervals : 
198s Level      Basic         
198s 95%   (-0.5952, -0.4665 )  
198s Calculations and Intervals on Original Scale
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 16: journals-lm-ci
198s R> ###################################################
198s R> confint(jour_lm,  parm = 2)
198s                  2.5 %  97.5 %
198s log(citeprice) -0.6033 -0.4628
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 17: ml-loglik
198s R> ###################################################
198s R> data("Equipment", package = "AER")
198s R> 
198s R> nlogL <- function(par) {
198s +    beta <- par[1:3]
198s +    theta <- par[4]
198s +    sigma2 <- par[5]
198s +  
198s +    Y <- with(Equipment, valueadded/firms)
198s +    K <- with(Equipment, capital/firms)
198s +    L <- with(Equipment, labor/firms)
198s +  
198s +    rhs <- beta[1] + beta[2] * log(K) + beta[3] * log(L)
198s +    lhs <- log(Y) + theta * Y
198s +  
198s +    rval <- sum(log(1 + theta * Y) - log(Y) +
198s +      dnorm(lhs, mean = rhs, sd = sqrt(sigma2), log = TRUE))
198s +    return(-rval)
198s +  }
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 18: ml-0
198s R> ###################################################
198s R> fm0 <- lm(log(valueadded/firms) ~ log(capital/firms) +
198s +    log(labor/firms), data = Equipment)
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 19: ml-0-coef
198s R> ###################################################
198s R> par0 <- as.vector(c(coef(fm0), 0, mean(residuals(fm0)^2)))
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 20: ml-optim
198s R> ###################################################
198s R> opt <- optim(par0, nlogL, hessian = TRUE)
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 21: ml-optim-output
198s R> ###################################################
198s R> opt$par
198s [1] 2.91469 0.34998 1.09232 0.10666 0.04275
198s R> sqrt(diag(solve(opt$hessian)))[1:4]
198s [1] 0.36055 0.09671 0.14079 0.05850
198s R> -opt$value
198s [1] -8.939
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 22: Sweave eval=FALSE
198s R> ###################################################
198s R> ## Sweave("Sweave-journals.Rnw")
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 23: Stangle eval=FALSE
198s R> ###################################################
198s R> ## Stangle("Sweave-journals.Rnw")
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 24: texi2dvi eval=FALSE
198s R> ###################################################
198s R> ## texi2dvi("Sweave-journals.tex", pdf = TRUE)
198s R> 
198s R> 
198s R> ###################################################
198s R> ### chunk number 25: vignette eval=FALSE
198s R> ###################################################
198s R> ## vignette("Sweave-journals", package = "AER")
198s R> 
198s R> 
198s R> 
198s BEGIN TEST Ch-TimeSeries.R
198s Warning messages:
198s 1: In log(1 + theta * Y) : NaNs produced
198s 2: In sqrt(sigma2) : NaNs produced
198s 
198s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
198s Copyright (C) 2025 The R Foundation for Statistical Computing
198s Platform: x86_64-pc-linux-gnu
198s 
198s R is free software and comes with ABSOLUTELY NO WARRANTY.
198s You are welcome to redistribute it under certain conditions.
198s Type 'license()' or 'licence()' for distribution details.
198s 
198s R is a collaborative project with many contributors.
198s Type 'contributors()' for more information and
198s 'citation()' on how to cite R or R packages in publications.
198s 
198s Type 'demo()' for some demos, 'help()' for on-line help, or
198s 'help.start()' for an HTML browser interface to help.
198s Type 'q()' to quit R.
198s 
198s > if(!requireNamespace("tseries") ||
198s +    !requireNamespace("urca") ||
198s +    !requireNamespace("dynlm") ||
198s +    !requireNamespace("strucchange")) q()
198s Loading required namespace: tseries
198s Registered S3 method overwritten by 'quantmod':
198s   method            from
198s   as.zoo.data.frame zoo 
198s Loading required namespace: urca
198s Loading required namespace: dynlm
198s Loading required namespace: strucchange
198s > 
198s > ###################################################
198s > ### chunk number 1: setup
198s > ###################################################
198s > options(prompt = "R> ", continue = "+  ", width = 64,
198s +   digits = 4, show.signif.stars = FALSE, useFancyQuotes = FALSE)
198s R> 
198s R> options(SweaveHooks = list(onefig =   function() {par(mfrow = c(1,1))},
198s +                             twofig =   function() {par(mfrow = c(1,2))},                           
198s +                             threefig = function() {par(mfrow = c(1,3))},
198s +                             fourfig =  function() {par(mfrow = c(2,2))},
198s +                             sixfig =   function() {par(mfrow = c(3,2))}))
198s R> 
198s R> library("AER")
198s Loading required package: car
198s Loading required package: carData
198s Loading required package: lmtest
198s Loading required package: zoo
198s 
198s Attaching package: 'zoo'
198s 
198s The following objects are masked from 'package:base':
198s 
198s     as.Date, as.Date.numeric
198s 
198s Loading required package: sandwich
198s Loading required package: survival
199s R> 
199s R> suppressWarnings(RNGversion("3.5.0"))
199s R> set.seed(1071)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 2: options
199s R> ###################################################
199s R> options(digits = 6)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 3: ts-plot eval=FALSE
199s R> ###################################################
199s R> ## data("UKNonDurables")
199s R> ## plot(UKNonDurables)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 4: UKNonDurables-data
199s R> ###################################################
199s R> data("UKNonDurables")
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 5: tsp
199s R> ###################################################
199s R> tsp(UKNonDurables)
199s [1] 1955.00 1988.75    4.00
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 6: window
199s R> ###################################################
199s R> window(UKNonDurables, end = c(1956, 4))
199s       Qtr1  Qtr2  Qtr3  Qtr4
199s 1955 24030 25620 26209 27167
199s 1956 24620 25972 26285 27659
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 7: filter eval=FALSE
199s R> ###################################################
199s R> ## data("UKDriverDeaths")
199s R> ## plot(UKDriverDeaths)
199s R> ## lines(filter(UKDriverDeaths, c(1/2, rep(1, 11), 1/2)/12),
199s R> ##   col = 2)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 8: ts-plot1
199s R> ###################################################
199s R> data("UKNonDurables")
199s R> plot(UKNonDurables)
199s R> data("UKDriverDeaths")
199s R> plot(UKDriverDeaths)
199s R> lines(filter(UKDriverDeaths, c(1/2, rep(1, 11), 1/2)/12),
199s +    col = 2)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 9: filter1 eval=FALSE
199s R> ###################################################
199s R> ## data("UKDriverDeaths")
199s R> ## plot(UKDriverDeaths)
199s R> ## lines(filter(UKDriverDeaths, c(1/2, rep(1, 11), 1/2)/12),
199s R> ##   col = 2)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 10: rollapply
199s R> ###################################################
199s R> plot(rollapply(UKDriverDeaths, 12, sd))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 11: ar-sim
199s R> ###################################################
199s R> set.seed(1234)
199s R> x <- filter(rnorm(100), 0.9, method = "recursive")
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 12: decompose
199s R> ###################################################
199s R> dd_dec <- decompose(log(UKDriverDeaths))
199s R> dd_stl <- stl(log(UKDriverDeaths), s.window = 13)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 13: decompose-components
199s R> ###################################################
199s R> plot(dd_dec$trend, ylab = "trend")
199s R> lines(dd_stl$time.series[,"trend"], lty = 2, lwd = 2)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 14: seat-mean-sd
199s R> ###################################################
199s R> plot(dd_dec$trend, ylab = "trend")
199s R> lines(dd_stl$time.series[,"trend"], lty = 2, lwd = 2)
199s R> plot(rollapply(UKDriverDeaths, 12, sd))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 15: stl
199s R> ###################################################
199s R> plot(dd_stl)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 16: Holt-Winters
199s R> ###################################################
199s R> dd_past <- window(UKDriverDeaths, end = c(1982, 12))
199s R> ## dd_hw <- try(HoltWinters(dd_past)) ## IGNORE_RDIFF, excluded due to small numeric deviations on different platforms
199s R> ## if(!inherits(dd_hw, "try-error")) {
199s R> ## dd_pred <- predict(dd_hw, n.ahead = 24)
199s R> ## 
199s R> ## 
199s R> ## ###################################################
199s R> ## ### chunk number 17: Holt-Winters-plot
199s R> ## ###################################################
199s R> ## plot(dd_hw, dd_pred, ylim = range(UKDriverDeaths))
199s R> ## lines(UKDriverDeaths)
199s R> ## 
199s R> ## 
199s R> ## ###################################################
199s R> ## ### chunk number 18: Holt-Winters-plot1
199s R> ## ###################################################
199s R> ## plot(dd_hw, dd_pred, ylim = range(UKDriverDeaths))
199s R> ## lines(UKDriverDeaths)
199s R> ## }
199s R> 
199s R> ###################################################
199s R> ### chunk number 19: acf eval=FALSE
199s R> ###################################################
199s R> ## acf(x)
199s R> ## pacf(x)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 20: acf1
199s R> ###################################################
199s R> acf(x, ylim = c(-0.2, 1))
199s R> pacf(x, ylim = c(-0.2, 1))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 21: ar
199s R> ###################################################
199s R> ar(x)
199s 
199s Call:
199s ar(x = x)
199s 
199s Coefficients:
199s     1  
199s 0.928  
199s 
199s Order selected 1  sigma^2 estimated as  1.29
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 22: window-non-durab
199s R> ###################################################
199s R> nd <- window(log(UKNonDurables), end = c(1970, 4))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 23: non-durab-acf
199s R> ###################################################
199s R> acf(diff(nd), ylim = c(-1, 1))
199s R> pacf(diff(nd), ylim = c(-1, 1))
199s R> acf(diff(diff(nd, 4)), ylim = c(-1, 1))
199s R> pacf(diff(diff(nd, 4)), ylim = c(-1, 1))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 24: non-durab-acf1
199s R> ###################################################
199s R> acf(diff(nd), ylim = c(-1, 1))
199s R> pacf(diff(nd), ylim = c(-1, 1))
199s R> acf(diff(diff(nd, 4)), ylim = c(-1, 1))
199s R> pacf(diff(diff(nd, 4)), ylim = c(-1, 1))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 25: arima-setup
199s R> ###################################################
199s R> nd_pars <- expand.grid(ar = 0:2, diff = 1, ma = 0:2,
199s +    sar = 0:1, sdiff = 1, sma = 0:1)
199s R> nd_aic <- rep(0, nrow(nd_pars))
199s R> for(i in seq(along = nd_aic)) nd_aic[i] <- AIC(arima(nd,
199s +    unlist(nd_pars[i, 1:3]), unlist(nd_pars[i, 4:6])),
199s +    k = log(length(nd)))
199s R> nd_pars[which.min(nd_aic),]
199s    ar diff ma sar sdiff sma
199s 22  0    1  1   0     1   1
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 26: arima
199s R> ###################################################
199s R> nd_arima <- arima(nd, order = c(0,1,1), seasonal = c(0,1,1))
199s R> nd_arima
199s 
199s Call:
199s arima(x = nd, order = c(0, 1, 1), seasonal = c(0, 1, 1))
199s 
199s Coefficients:
199s          ma1    sma1
199s       -0.353  -0.583
199s s.e.   0.143   0.138
199s 
199s sigma^2 estimated as 9.65e-05:  log likelihood = 188.14,  aic = -370.27
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 27: tsdiag
199s R> ###################################################
199s R> tsdiag(nd_arima)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 28: tsdiag1
199s R> ###################################################
199s R> tsdiag(nd_arima)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 29: arima-predict
199s R> ###################################################
199s R> nd_pred <- predict(nd_arima, n.ahead = 18 * 4)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 30: arima-compare
199s R> ###################################################
199s R> plot(log(UKNonDurables))
199s R> lines(nd_pred$pred, col = 2)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 31: arima-compare1
199s R> ###################################################
199s R> plot(log(UKNonDurables))
199s R> lines(nd_pred$pred, col = 2)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 32: pepper
199s R> ###################################################
199s R> data("PepperPrice")
199s R> plot(PepperPrice, plot.type = "single", col = 1:2)
199s R> legend("topleft", c("black", "white"), bty = "n", 
199s +  col = 1:2, lty = rep(1,2))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 33: pepper1
199s R> ###################################################
199s R> data("PepperPrice")
199s R> plot(PepperPrice, plot.type = "single", col = 1:2)
199s R> legend("topleft", c("black", "white"), bty = "n", 
199s +  col = 1:2, lty = rep(1,2))
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 34: adf1
199s R> ###################################################
199s R> library("tseries")
199s R> adf.test(log(PepperPrice[, "white"]))
199s 
199s 	Augmented Dickey-Fuller Test
199s 
199s data:  log(PepperPrice[, "white"])
199s Dickey-Fuller = -1.744, Lag order = 6, p-value = 0.684
199s alternative hypothesis: stationary
199s 
199s R> 
199s R> 
199s R> Warning message:
199s In adf.test(diff(log(PepperPrice[, "white"]))) :
199s   p-value smaller than printed p-value
199s ###################################################
199s R> ### chunk number 35: adf1
199s R> ###################################################
199s R> adf.test(diff(log(PepperPrice[, "white"])))
199s 
199s 	Augmented Dickey-Fuller Test
199s 
199s data:  diff(log(PepperPrice[, "white"]))
199s Dickey-Fuller = -5.336, Lag order = 6, p-value = 0.01
199s alternative hypothesis: stationary
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 36: pp
199s R> ###################################################
199s R> pp.test(log(PepperPrice[, "white"]), type = "Z(t_alpha)")
199s 
199s 	Phillips-Perron Unit Root Test
199s 
199s data:  log(PepperPrice[, "white"])
199s Dickey-Fuller Z(t_alpha) = -1.644, Truncation lag
199s parameter = 5, p-value = 0.726
199s alternative hypothesis: stationary
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 37: urca eval=FALSE
199s R> ###################################################
199s R> ## library("urca")
199s R> ## pepper_ers <- ur.ers(log(PepperPrice[, "white"]),
199s R> ##   type = "DF-GLS", model = "const", lag.max = 4)
199s R> ## summary(pepper_ers)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 38: kpss
199s R> ###################################################
199s R> kpss.test(log(PepperPrice[, "white"]))
199s 
199s 	KPSS Test for Level Stationarity
199s 
199s data:  log(PepperPrice[, "white"])
199s KPSS Level = 0.6173, Truncation lag parameter = 5,
199s p-value = 0.0211
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 39: po
199s R> ###################################################
199s R> po.test(log(PepperPrice))
199s 
199s 	Phillips-Ouliaris Cointegration Test
199s 
199s data:  log(PepperPrice)
199s Phillips-Ouliaris demeaned = -24.1, Truncation lag
199s parameter = 2, p-value = 0.024
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 40: joh-trace
199s R> ###################################################
199s R> library("urca")
199s R> pepper_jo <- ca.jo(log(PepperPrice), ecdet = "const",
199s +    type = "trace")
199s R> ## summary(pepper_jo) ## IGNORE_RDIFF, excluded due to small numeric deviations on different platforms
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 41: joh-lmax eval=FALSE
199s R> ###################################################
199s R> ## pepper_jo2 <- ca.jo(log(PepperPrice), ecdet = "const", type = "eigen")
199s R> ## summary(pepper_jo2)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 42: dynlm-by-hand
199s R> ###################################################
199s R> dd <- log(UKDriverDeaths)
199s R> dd_dat <- ts.intersect(dd, dd1 = lag(dd, k = -1),
199s +    dd12 = lag(dd, k = -12))
199s R> lm(dd ~ dd1 + dd12, data = dd_dat)
199s 
199s Call:
199s lm(formula = dd ~ dd1 + dd12, data = dd_dat)
199s 
199s Coefficients:
199s (Intercept)          dd1         dd12  
199s       0.421        0.431        0.511  
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 43: dynlm
199s R> ###################################################
199s R> library("dynlm")
199s R> dynlm(dd ~ L(dd) + L(dd, 12))
199s 
199s Time series regression with "ts" data:
199s Start = 1970(1), End = 1984(12)
199s 
199s Call:
199s dynlm(formula = dd ~ L(dd) + L(dd, 12))
199s 
199s Coefficients:
199s (Intercept)        L(dd)    L(dd, 12)  
199s       0.421        0.431        0.511  
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 44: efp
199s R> ###################################################
199s R> library("strucchange")
199s R> dd_ocus <- efp(dd ~ dd1 + dd12, data = dd_dat,
199s +    type = "OLS-CUSUM")
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 45: efp-test
199s R> ###################################################
199s R> sctest(dd_ocus)
199s 
199s 	OLS-based CUSUM test
199s 
199s data:  dd_ocus
199s S0 = 1.487, p-value = 0.0241
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 46: efp-plot eval=FALSE
199s R> ###################################################
199s R> ## plot(dd_ocus)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 47: Fstats
199s R> ###################################################
199s R> dd_fs <- Fstats(dd ~ dd1 + dd12, data = dd_dat, from = 0.1)
199s R> plot(dd_fs)
199s R> sctest(dd_fs)
199s 
199s 	supF test
199s 
199s data:  dd_fs
199s sup.F = 19.33, p-value = 0.00672
199s 
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 48: ocus-supF
199s R> ###################################################
199s R> plot(dd_ocus)
199s R> plot(dd_fs, main = "supF test")
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 49: GermanM1
199s R> ###################################################
199s R> data("GermanM1")
199s R> LTW <- dm ~ dy2 + dR + dR1 + dp + m1 + y1 + R1 + season
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 50: re eval=FALSE
199s R> ###################################################
199s R> ## m1_re <- efp(LTW, data = GermanM1, type = "RE")
199s R> ## plot(m1_re)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 51: re1
199s R> ###################################################
199s R> m1_re <- efp(LTW, data = GermanM1, type = "RE")
199s R> plot(m1_re)
199s R> 
199s R> 
199s R> ###################################################
199s R> ### chunk number 52: dating
199s R> ###################################################
199s R> dd_bp <- breakpoints(dd ~ dd1 + dd12, data = dd_dat, h = 0.1)
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 53: dating-coef
200s R> ###################################################
200s R> coef(dd_bp, breaks = 2)
200s                    (Intercept)      dd1     dd12
200s 1970(1) - 1973(10)     1.45776 0.117323 0.694480
200s 1973(11) - 1983(1)     1.53421 0.218214 0.572330
200s 1983(2) - 1984(12)     1.68690 0.548609 0.214166
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 54: dating-plot eval=FALSE
200s R> ###################################################
200s R> ## plot(dd)
200s R> ## lines(fitted(dd_bp, breaks = 2), col = 4)
200s R> ## lines(confint(dd_bp, breaks = 2))
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 55: dating-plot1
200s R> ###################################################
200s R> plot(dd_bp, legend = FALSE, main = "")
200s R> plot(dd)
200s R> lines(fitted(dd_bp, breaks = 2), col = 4)
200s R> lines(confint(dd_bp, breaks = 2))
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 56: StructTS
200s R> ###################################################
200s R> dd_struct <- StructTS(log(UKDriverDeaths))
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 57: StructTS-plot eval=FALSE
200s R> ###################################################
200s R> ## plot(cbind(fitted(dd_struct), residuals(dd_struct)))
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 58: StructTS-plot1
200s R> ###################################################
200s R> dd_struct_plot <- cbind(fitted(dd_struct), residuals = residuals(dd_struct))
200s R> colnames(dd_struct_plot) <- c("level", "slope", "season", "residuals")
200s R> plot(dd_struct_plot, main = "")
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 59: garch-plot
200s R> ###################################################
200s R> data("MarkPound")
200s R> plot(MarkPound, main = "")
200s R> 
200s R> 
200s R> ###################################################
200s R> ### chunk number 60: garch
200s R> ###################################################
200s R> data("MarkPound")
200s R> mp <- garch(MarkPound, grad = "numerical", trace = FALSE)
200s R> summary(mp)
200s 
200s Call:
200s garch(x = MarkPound, grad = "numerical", trace = FALSE)
200s 
200s Model:
200s GARCH(1,1)
200s 
200s Residuals:
200s      Min       1Q   Median       3Q      Max 
200s -6.79739 -0.53703 -0.00264  0.55233  5.24867 
200s 
200s Coefficient(s):
200s     Estimate  Std. Error  t value Pr(>|t|)
200s a0    0.0109      0.0013     8.38   <2e-16
200s a1    0.1546      0.0139    11.14   <2e-16
200s b1    0.8044      0.0160    50.13   <2e-16
200s 
200s Diagnostic Tests:
200s 	Jarque Bera Test
200s 
200s data:  Residuals
200s X-squared = 1060, df = 2, p-value <2e-16
200s 
200s 
200s 	Box-Ljung test
200s 
200s data:  Squared.Residuals
200s X-squared = 2.478, df = 1, p-value = 0.115
200s 
200s R> 
200s R> 
200s R> 
200s BEGIN TEST Ch-Validation.R
200s 
200s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
200s Copyright (C) 2025 The R Foundation for Statistical Computing
200s Platform: x86_64-pc-linux-gnu
200s 
200s R is free software and comes with ABSOLUTELY NO WARRANTY.
200s You are welcome to redistribute it under certain conditions.
200s Type 'license()' or 'licence()' for distribution details.
200s 
200s R is a collaborative project with many contributors.
200s Type 'contributors()' for more information and
200s 'citation()' on how to cite R or R packages in publications.
200s 
200s Type 'demo()' for some demos, 'help()' for on-line help, or
200s 'help.start()' for an HTML browser interface to help.
200s Type 'q()' to quit R.
200s 
200s Loading required namespace: dynlm
200s > if(!requireNamespace("dynlm") || !requireNamespace("MASS") || !requireNamespace("quantreg")) q()
200s Loading required namespace: MASS
200s Loading required namespace: quantreg
201s > 
201s > ###################################################
201s > ### chunk number 1: setup
201s > ###################################################
201s > options(prompt = "R> ", continue = "+  ", width = 64,
201s +   digits = 4, show.signif.stars = FALSE, useFancyQuotes = FALSE)
201s R> 
201s R> options(SweaveHooks = list(onefig =   function() {par(mfrow = c(1,1))},
201s +                             twofig =   function() {par(mfrow = c(1,2))},                           
201s +                             threefig = function() {par(mfrow = c(1,3))},
201s +                             fourfig =  function() {par(mfrow = c(2,2))},
201s +                             sixfig =   function() {par(mfrow = c(3,2))}))
201s R> 
201s R> library("AER")
201s Loading required package: car
201s Loading required package: carData
201s Loading required package: lmtest
201s Loading required package: zoo
201s 
201s Attaching package: 'zoo'
201s 
201s The following objects are masked from 'package:base':
201s 
201s     as.Date, as.Date.numeric
201s 
201s Loading required package: sandwich
201s Loading required package: survival
201s R> 
201s R> suppressWarnings(RNGversion("3.5.0"))
201s R> set.seed(1071)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 2: ps-summary
201s R> ###################################################
201s R> data("PublicSchools")
201s R> summary(PublicSchools)
201s   Expenditure      Income     
201s  Min.   :259   Min.   : 5736  
201s  1st Qu.:315   1st Qu.: 6670  
201s  Median :354   Median : 7597  
201s  Mean   :373   Mean   : 7608  
201s  3rd Qu.:426   3rd Qu.: 8286  
201s  Max.   :821   Max.   :10851  
201s  NA's   :1                    
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 3: ps-plot eval=FALSE
201s R> ###################################################
201s R> ## ps <- na.omit(PublicSchools)
201s R> ## ps$Income <- ps$Income / 10000
201s R> ## plot(Expenditure ~ Income, data = ps, ylim = c(230, 830))
201s R> ## ps_lm <- lm(Expenditure ~ Income, data = ps)
201s R> ## abline(ps_lm)
201s R> ## id <- c(2, 24, 48)
201s R> ## text(ps[id, 2:1], rownames(ps)[id], pos = 1, xpd = TRUE)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 4: ps-plot1
201s R> ###################################################
201s R> ps <- na.omit(PublicSchools)
201s R> ps$Income <- ps$Income / 10000
201s R> plot(Expenditure ~ Income, data = ps, ylim = c(230, 830))
201s R> ps_lm <- lm(Expenditure ~ Income, data = ps)
201s R> abline(ps_lm)
201s R> id <- c(2, 24, 48)
201s R> text(ps[id, 2:1], rownames(ps)[id], pos = 1, xpd = TRUE)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 5: ps-lmplot eval=FALSE
201s R> ###################################################
201s R> ## plot(ps_lm, which = 1:6)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 6: ps-lmplot1
201s R> ###################################################
201s R> plot(ps_lm, which = 1:6)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 7: ps-hatvalues eval=FALSE
201s R> ###################################################
201s R> ## ps_hat <- hatvalues(ps_lm)
201s R> ## plot(ps_hat)
201s R> ## abline(h = c(1, 3) * mean(ps_hat), col = 2)
201s R> ## id <- which(ps_hat > 3 * mean(ps_hat))
201s R> ## text(id, ps_hat[id], rownames(ps)[id], pos = 1, xpd = TRUE)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 8: ps-hatvalues1
201s R> ###################################################
201s R> ps_hat <- hatvalues(ps_lm)
201s R> plot(ps_hat)
201s R> abline(h = c(1, 3) * mean(ps_hat), col = 2)
201s R> id <- which(ps_hat > 3 * mean(ps_hat))
201s R> text(id, ps_hat[id], rownames(ps)[id], pos = 1, xpd = TRUE)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 9: influence-measures1 eval=FALSE
201s R> ###################################################
201s R> ## influence.measures(ps_lm)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 10: which-hatvalues
201s R> ###################################################
201s R> which(ps_hat > 3 * mean(ps_hat))
201s        Alaska Washington DC 
201s             2            48 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 11: influence-measures2
201s R> ###################################################
201s R> summary(influence.measures(ps_lm))
201s Potentially influential observations of
201s 	 lm(formula = Expenditure ~ Income, data = ps) :
201s 
201s               dfb.1_  dfb.Incm dffit   cov.r   cook.d  hat    
201s Alaska        -2.39_*  2.52_*   2.65_*  0.55_*  2.31_*  0.21_*
201s Mississippi    0.07   -0.07     0.08    1.14_*  0.00    0.08  
201s Washington DC  0.66   -0.71    -0.77_*  1.01    0.28    0.13_*
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 12: ps-noinf eval=FALSE
201s R> ###################################################
201s R> ## plot(Expenditure ~ Income, data = ps, ylim = c(230, 830))
201s R> ## abline(ps_lm)
201s R> ## id <- which(apply(influence.measures(ps_lm)$is.inf, 1, any))
201s R> ## text(ps[id, 2:1], rownames(ps)[id], pos = 1, xpd = TRUE)
201s R> ## ps_noinf <- lm(Expenditure ~ Income, data = ps[-id,])
201s R> ## abline(ps_noinf, lty = 2)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 13: ps-noinf1
201s R> ###################################################
201s R> plot(Expenditure ~ Income, data = ps, ylim = c(230, 830))
201s R> abline(ps_lm)
201s R> id <- which(apply(influence.measures(ps_lm)$is.inf, 1, any))
201s R> text(ps[id, 2:1], rownames(ps)[id], pos = 1, xpd = TRUE)
201s R> ps_noinf <- lm(Expenditure ~ Income, data = ps[-id,])
201s R> abline(ps_noinf, lty = 2)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 14: journals-age
201s R> ###################################################
201s R> data("Journals")
201s R> journals <- Journals[, c("subs", "price")]
201s R> journals$citeprice <- Journals$price/Journals$citations
201s R> journals$age <- 2000 - Journals$foundingyear
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 15: journals-lm
201s R> ###################################################
201s R> jour_lm <- lm(log(subs) ~ log(citeprice), data = journals)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 16: bptest1
201s R> ###################################################
201s R> bptest(jour_lm)
201s 
201s 	studentized Breusch-Pagan test
201s 
201s data:  jour_lm
201s BP = 9.8, df = 1, p-value = 0.002
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 17: bptest2
201s R> ###################################################
201s R> bptest(jour_lm, ~ log(citeprice) + I(log(citeprice)^2),
201s +    data = journals)
201s 
201s 	studentized Breusch-Pagan test
201s 
201s data:  jour_lm
201s BP = 11, df = 2, p-value = 0.004
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 18: gqtest
201s R> ###################################################
201s R> gqtest(jour_lm, order.by = ~ citeprice, data = journals)
201s 
201s 	Goldfeld-Quandt test
201s 
201s data:  jour_lm
201s GQ = 1.7, df1 = 88, df2 = 88, p-value = 0.007
201s alternative hypothesis: variance increases from segment 1 to 2
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 19: resettest
201s R> ###################################################
201s R> resettest(jour_lm)
201s 
201s 	RESET test
201s 
201s data:  jour_lm
201s RESET = 1.4, df1 = 2, df2 = 176, p-value = 0.2
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 20: raintest
201s R> ###################################################
201s R> raintest(jour_lm, order.by = ~ age, data = journals)
201s 
201s 	Rainbow test
201s 
201s data:  jour_lm
201s Rain = 1.8, df1 = 90, df2 = 88, p-value = 0.004
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 21: harvtest
201s R> ###################################################
201s R> harvtest(jour_lm, order.by = ~ age, data = journals)
201s 
201s 	Harvey-Collier test
201s 
201s data:  jour_lm
201s HC = 5.1, df = 177, p-value = 9e-07
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 22: 
201s R> ###################################################
201s R> library("dynlm")
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 23: usmacro-dynlm
201s R> ###################################################
201s R> data("USMacroG")
201s R> consump1 <- dynlm(consumption ~ dpi + L(dpi),
201s +    data = USMacroG)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 24: dwtest
201s R> ###################################################
201s R> dwtest(consump1)
201s 
201s 	Durbin-Watson test
201s 
201s data:  consump1
201s DW = 0.087, p-value <2e-16
201s alternative hypothesis: true autocorrelation is greater than 0
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 25: Box-test
201s R> ###################################################
201s R> Box.test(residuals(consump1), type = "Ljung-Box")
201s 
201s 	Box-Ljung test
201s 
201s data:  residuals(consump1)
201s X-squared = 176, df = 1, p-value <2e-16
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 26: bgtest
201s R> ###################################################
201s R> bgtest(consump1)
201s 
201s 	Breusch-Godfrey test for serial correlation of order up
201s 	to 1
201s 
201s data:  consump1
201s LM test = 193, df = 1, p-value <2e-16
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 27: vcov
201s R> ###################################################
201s R> vcov(jour_lm)
201s                (Intercept) log(citeprice)
201s (Intercept)      3.126e-03     -6.144e-05
201s log(citeprice)  -6.144e-05      1.268e-03
201s R> vcovHC(jour_lm)
201s                (Intercept) log(citeprice)
201s (Intercept)       0.003085       0.000693
201s log(citeprice)    0.000693       0.001188
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 28: coeftest
201s R> ###################################################
201s R> coeftest(jour_lm, vcov = vcovHC)
201s 
201s t test of coefficients:
201s 
201s                Estimate Std. Error t value Pr(>|t|)
201s (Intercept)      4.7662     0.0555    85.8   <2e-16
201s log(citeprice)  -0.5331     0.0345   -15.5   <2e-16
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 29: sandwiches
201s R> ###################################################
201s R> t(sapply(c("const", "HC0", "HC1", "HC2", "HC3", "HC4"),
201s +    function(x) sqrt(diag(vcovHC(jour_lm, type = x)))))
201s       (Intercept) log(citeprice)
201s const     0.05591        0.03561
201s HC0       0.05495        0.03377
201s HC1       0.05526        0.03396
201s HC2       0.05525        0.03412
201s HC3       0.05555        0.03447
201s HC4       0.05536        0.03459
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 30: ps-anova
201s R> ###################################################
201s R> ps_lm <- lm(Expenditure ~ Income, data = ps)
201s R> ps_lm2 <- lm(Expenditure ~ Income + I(Income^2), data = ps)
201s R> anova(ps_lm, ps_lm2)
201s Analysis of Variance Table
201s 
201s Model 1: Expenditure ~ Income
201s Model 2: Expenditure ~ Income + I(Income^2)
201s   Res.Df    RSS Df Sum of Sq    F Pr(>F)
201s 1     48 181015                         
201s 2     47 150986  1     30030 9.35 0.0037
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 31: ps-waldtest
201s R> ###################################################
201s R> waldtest(ps_lm, ps_lm2, vcov = vcovHC(ps_lm2, type = "HC4"))
201s Wald test
201s 
201s Model 1: Expenditure ~ Income
201s Model 2: Expenditure ~ Income + I(Income^2)
201s   Res.Df Df    F Pr(>F)
201s 1     48               
201s 2     47  1 0.08   0.77
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 32: vcovHAC
201s R> ###################################################
201s R> rbind(SE = sqrt(diag(vcov(consump1))),
201s +    QS = sqrt(diag(kernHAC(consump1))),
201s +    NW = sqrt(diag(NeweyWest(consump1))))
201s    (Intercept)    dpi L(dpi)
201s SE       14.51 0.2063 0.2075
201s QS       94.11 0.3893 0.3669
201s NW      100.83 0.4230 0.3989
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 33: solow-lm
201s R> ###################################################
201s R> data("OECDGrowth")
201s R> solow_lm <- lm(log(gdp85/gdp60) ~ log(gdp60) +
201s +    log(invest) + log(popgrowth + .05), data = OECDGrowth)
201s R> summary(solow_lm)
201s 
201s Call:
201s lm(formula = log(gdp85/gdp60) ~ log(gdp60) + log(invest) + log(popgrowth + 
201s     0.05), data = OECDGrowth)
201s 
201s Residuals:
201s     Min      1Q  Median      3Q     Max 
201s -0.1840 -0.0399 -0.0078  0.0451  0.3188 
201s 
201s Coefficients:
201s                       Estimate Std. Error t value Pr(>|t|)
201s (Intercept)             2.9759     1.0216    2.91   0.0093
201s log(gdp60)             -0.3429     0.0565   -6.07  9.8e-06
201s log(invest)             0.6501     0.2020    3.22   0.0048
201s log(popgrowth + 0.05)  -0.5730     0.2904   -1.97   0.0640
201s 
201s Residual standard error: 0.133 on 18 degrees of freedom
201s Multiple R-squared:  0.746,	Adjusted R-squared:  0.704 
201s F-statistic: 17.7 on 3 and 18 DF,  p-value: 1.34e-05
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 34: solow-plot eval=FALSE
201s R> ###################################################
201s R> ## plot(solow_lm)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 35: solow-lts
201s R> ###################################################
201s R> library("MASS")
201s R> solow_lts <- lqs(log(gdp85/gdp60) ~ log(gdp60) +
201s +    log(invest) + log(popgrowth + .05), data = OECDGrowth,
201s +    psamp = 13, nsamp = "exact")
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 36: solow-smallresid
201s R> ###################################################
201s R> smallresid <- which(
201s +    abs(residuals(solow_lts)/solow_lts$scale[2]) <= 2.5)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 37: solow-nohighlev
201s R> ###################################################
201s R> X <- model.matrix(solow_lm)[,-1]
201s R> Xcv <- cov.rob(X, nsamp = "exact")
201s R> nohighlev <- which(
201s +    sqrt(mahalanobis(X, Xcv$center, Xcv$cov)) <= 2.5)
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 38: solow-goodobs
201s R> ###################################################
201s R> goodobs <- unique(c(smallresid, nohighlev))
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 39: solow-badobs
201s R> ###################################################
201s R> rownames(OECDGrowth)[-goodobs]
201s [1] "Canada"    "USA"       "Turkey"    "Australia"
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 40: solow-rob
201s R> ###################################################
201s R> solow_rob <- update(solow_lm, subset = goodobs)
201s R> summary(solow_rob)
201s 
201s Call:
201s lm(formula = log(gdp85/gdp60) ~ log(gdp60) + log(invest) + log(popgrowth + 
201s     0.05), data = OECDGrowth, subset = goodobs)
201s 
201s Residuals:
201s      Min       1Q   Median       3Q      Max 
201s -0.15454 -0.05548 -0.00651  0.03159  0.26773 
201s 
201s Coefficients:
201s                       Estimate Std. Error t value Pr(>|t|)
201s (Intercept)             3.7764     1.2816    2.95   0.0106
201s log(gdp60)             -0.4507     0.0569   -7.93  1.5e-06
201s log(invest)             0.7033     0.1906    3.69   0.0024
201s log(popgrowth + 0.05)  -0.6504     0.4190   -1.55   0.1429
201s 
201s Residual standard error: 0.107 on 14 degrees of freedom
201s Multiple R-squared:  0.853,	Adjusted R-squared:  0.822 
201s F-statistic: 27.1 on 3 and 14 DF,  p-value: 4.3e-06
201s 
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 41: quantreg
201s R> ###################################################
201s R> library("quantreg")
201s Loading required package: SparseM
201s R> 
201s R> 
201s R> ###################################################
201s R> ### chunk number 42: cps-lad
201s R> ###################################################
201s R> library("quantreg")
201s R> data("CPS1988")
201s 
201s Attaching package: 'quantreg'
201s 
201s The following object is masked from 'package:survival':
201s 
201s     untangle.specials
201s 
201s R> cps_f <- log(wage) ~ experience + I(experience^2) + education
201s R> cps_lad <- rq(cps_f, data = CPS1988)
202s R> summary(cps_lad)
203s 
203s Call: rq(formula = cps_f, data = CPS1988)
203s 
203s tau: [1] 0.5
203s 
203s Coefficients:
203s                 Value     Std. Error t value   Pr(>|t|) 
203s (Intercept)       4.24088   0.02190  193.67805   0.00000
203s experience        0.07744   0.00115   67.50041   0.00000
203s I(experience^2)  -0.00130   0.00003  -49.97891   0.00000
203s education         0.09429   0.00140   67.57171   0.00000
203s R> 
203s R> 
203s R> ###################################################
203s R> ### chunk number 43: cps-rq
203s R> ###################################################
203s R> cps_rq <- rq(cps_f, tau = c(0.25, 0.75), data = CPS1988)
203s R> summary(cps_rq)
205s 
205s Call: rq(formula = cps_f, tau = c(0.25, 0.75), data = CPS1988)
205s 
205s tau: [1] 0.25
205s 
205s Coefficients:
205s                 Value     Std. Error t value   Pr(>|t|) 
205s (Intercept)       3.78227   0.02866  131.95189   0.00000
205s experience        0.09156   0.00152   60.26474   0.00000
205s I(experience^2)  -0.00164   0.00004  -45.39065   0.00000
205s education         0.09321   0.00185   50.32520   0.00000
205s 
205s Call: rq(formula = cps_f, tau = c(0.25, 0.75), data = CPS1988)
205s 
205s tau: [1] 0.75
205s 
205s Coefficients:
205s                 Value     Std. Error t value   Pr(>|t|) 
205s (Intercept)       4.66005   0.02023  230.39734   0.00000
205s experience        0.06377   0.00097   65.41364   0.00000
205s I(experience^2)  -0.00099   0.00002  -44.15591   0.00000
205s education         0.09434   0.00134   70.65855   0.00000
205s R> 
205s R> 
205s R> ###################################################
205s R> ### chunk number 44: cps-rqs
205s R> ###################################################
205s R> cps_rq25 <- rq(cps_f, tau = 0.25, data = CPS1988)
205s R> cps_rq75 <- rq(cps_f, tau = 0.75, data = CPS1988)
206s R> anova(cps_rq25, cps_rq75)
208s Quantile Regression Analysis of Deviance Table
208s 
208s Model: log(wage) ~ experience + I(experience^2) + education
208s Joint Test of Equality of Slopes: tau in {  0.25 0.75  }
208s 
208s   Df Resid Df F value Pr(>F)
208s 1  3    56307     115 <2e-16
208s R> 
208s R> 
208s R> ###################################################
208s R> ### chunk number 45: cps-rq-anova
208s R> ###################################################
208s R> anova(cps_rq25, cps_rq75, joint = FALSE)
209s Quantile Regression Analysis of Deviance Table
209s 
209s Model: log(wage) ~ experience + I(experience^2) + education
209s Tests of Equality of Distinct Slopes: tau in {  0.25 0.75  }
209s 
209s                 Df Resid Df F value Pr(>F)
209s experience       1    56309  339.41 <2e-16
209s I(experience^2)  1    56309  329.74 <2e-16
209s education        1    56309    0.35   0.55
209s R> 
209s R> 
209s R> ###################################################
209s R> ### chunk number 46: rqbig
209s R> ###################################################
209s R> cps_rqbig <- rq(cps_f, tau = seq(0.05, 0.95, by = 0.05),
209s +    data = CPS1988)
217s R> cps_rqbigs <- summary(cps_rqbig)
233s R> 
233s R> 
233s R> ###################################################
233s R> ### chunk number 47: rqbig-plot eval=FALSE
233s R> ###################################################
233s R> ## plot(cps_rqbigs)
233s R> 
233s R> 
233s R> ###################################################
233s R> ### chunk number 48: rqbig-plot1
233s R> ###################################################
233s R> plot(cps_rqbigs)
233s Warning message:
233s In summary.rq(xi, U = U, ...) : 18 non-positive fis
233s R> 
233s R> 
233s R> 
234s autopkgtest [01:53:19]: test run-unit-test: -----------------------]
234s autopkgtest [01:53:19]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
234s run-unit-test        PASS
234s autopkgtest [01:53:19]: test pkg-r-autopkgtest: preparing testbed
254s Creating nova instance adt-resolute-amd64-r-cran-aer-20260210-014925-juju-7f2275-prod-proposed-migration-environment-15-135ce5e8-41bd-49af-aff1-9f527370f24a from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
325s autopkgtest [01:54:50]: testbed dpkg architecture: amd64
325s autopkgtest [01:54:50]: testbed apt version: 3.1.14
326s autopkgtest [01:54:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup
326s autopkgtest [01:54:51]: testbed release detected to be: resolute
326s autopkgtest [01:54:51]: updating testbed package index (apt update)
327s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
327s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
327s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
327s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
327s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [173 kB]
327s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1637 kB]
327s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB]
327s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [201 kB]
327s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [253 kB]
327s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5996 B]
327s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [316 B]
327s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [639 kB]
327s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1584 kB]
327s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [33.3 kB]
327s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [4320 B]
327s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [25.2 kB]
328s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
328s Fetched 4710 kB in 1s (4587 kB/s)
329s Reading package lists...
329s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
329s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
329s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
329s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
330s Reading package lists...
330s Reading package lists...
330s Building dependency tree...
330s Reading state information...
330s Calculating upgrade...
331s The following package was automatically installed and is no longer required:
331s   libpython3.13
331s Use 'sudo apt autoremove' to remove it.
331s The following NEW packages will be installed:
331s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
331s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
331s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
331s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
331s The following packages will be upgraded:
331s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
331s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
331s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
331s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
331s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0
331s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
331s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
331s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
331s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
331s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
331s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
331s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
331s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
331s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
331s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
331s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
331s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
331s Need to get 237 MB of archives.
331s After this operation, 339 MB of additional disk space will be used.
331s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
331s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
331s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
331s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
331s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
331s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
331s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
331s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
331s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
331s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
331s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
331s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
331s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
331s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
331s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
331s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
331s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
331s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
331s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
331s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
331s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
331s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
331s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
331s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
331s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
331s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
331s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
331s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
331s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
331s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
331s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
331s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
331s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
331s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
331s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
331s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
331s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
331s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
331s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
331s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
331s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
331s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
331s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
331s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
331s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
331s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
331s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
331s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
331s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
331s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
331s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
331s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
331s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
331s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
331s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
331s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
331s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
331s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
331s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
331s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
331s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
331s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
331s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
331s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
331s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
331s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
331s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
331s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
331s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
331s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
331s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
331s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
331s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
331s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
331s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
331s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
331s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
332s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
332s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
332s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
332s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
332s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
342s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
343s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
343s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
343s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
343s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
343s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
343s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
343s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
344s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
344s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
344s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
344s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
344s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
344s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
344s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
344s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
344s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
344s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
344s dpkg-preconfigure: unable to re-open stdin: No such file or directory
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350s Selecting previously unselected package linux-headers-6.19.0-3.
350s Preparing to unpack .../81-linux-headers-6.19.0-3_6.19.0-3.3_all.deb ...
350s Unpacking linux-headers-6.19.0-3 (6.19.0-3.3) ...
351s Selecting previously unselected package linux-headers-6.19.0-3-generic.
351s Preparing to unpack .../82-linux-headers-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
351s Unpacking linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
352s Preparing to unpack .../83-linux-headers-generic_6.19.0-3.3_amd64.deb ...
352s Unpacking linux-headers-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
352s Preparing to unpack .../84-linux-perf_6.19.0-3.3_amd64.deb ...
352s Unpacking linux-perf (6.19.0-3.3) over (6.18.0-9.9) ...
352s Preparing to unpack .../85-linux-tools-common_6.19.0-3.3_all.deb ...
352s Unpacking linux-tools-common (6.19.0-3.3) over (6.18.0-9.9) ...
352s Selecting previously unselected package linux-tools-6.19.0-3.
352s Preparing to unpack .../86-linux-tools-6.19.0-3_6.19.0-3.3_amd64.deb ...
352s Unpacking linux-tools-6.19.0-3 (6.19.0-3.3) ...
352s Selecting previously unselected package linux-tools-6.19.0-3-generic.
352s Preparing to unpack .../87-linux-tools-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
352s Unpacking linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
352s Preparing to unpack .../88-patch_2.8-2build1_amd64.deb ...
352s Unpacking patch (2.8-2build1) over (2.8-2) ...
352s Preparing to unpack .../89-pollinate_4.33-4ubuntu5_all.deb ...
352s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ...
352s Preparing to unpack .../90-python3-referencing_0.36.2-1ubuntu2_all.deb ...
352s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ...
352s Preparing to unpack .../91-ubuntu-kernel-accessories_1.564_amd64.deb ...
352s Unpacking ubuntu-kernel-accessories (1.564) over (1.563) ...
352s Setting up libip4tc2:amd64 (1.8.11-2ubuntu3) ...
352s Setting up 3cpio (0.14.0-1ubuntu1) ...
352s Setting up libxau6:amd64 (1:1.0.11-1build2) ...
352s Setting up libnpth0t64:amd64 (1.8-3build1) ...
352s Setting up libkeyutils1:amd64 (1.6.3-6ubuntu3) ...
352s Setting up ubuntu-kernel-accessories (1.564) ...
352s Setting up libgpm2:amd64 (1.20.7-12build1) ...
352s Setting up libgdbm6t64:amd64 (1.26-1build1) ...
352s Setting up linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
353s Setting up libgdbm-compat4t64:amd64 (1.26-1build1) ...
353s Setting up bpftool (7.7.0+6.19.0-3.3) ...
353s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ...
353s Setting up liblsof0 (4.99.4+dfsg-2build2) ...
353s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ...
353s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ...
354s Setting up libsensors-config (1:3.6.2-2build1) ...
354s Setting up less (668-1build1) ...
354s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ...
354s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
354s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
354s amd64-microcode: microcode will be updated at next boot
354s Setting up man-db (2.13.1-1build1) ...
354s Updating database of manual pages ...
355s man-db.service is a disabled or a static unit not running, not starting it.
355s Setting up libjansson4:amd64 (2.14-2build4) ...
355s Setting up libglib2.0-data (2.87.2-2) ...
355s Setting up pollinate (4.33-4ubuntu5) ...
366s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
366s Setting up libwrap0:amd64 (7.6.q-36build2) ...
366s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
367s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
367s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
367s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
367s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
367s Setting up patch (2.8-2build1) ...
367s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
367s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
367s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
367s Setting up lsof (4.99.4+dfsg-2build2) ...
367s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
367s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
367s Setting up dracut-install (109-11ubuntu1) ...
367s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
367s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
367s Setting up pnp.ids (0.394-1build1) ...
367s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
367s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
367s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
367s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
367s Setting up mawk (1.3.4.20260129-1) ...
367s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
367s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
367s Setting up linux-image-virtual (6.19.0-3.3) ...
367s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
367s Setting up libbsd0:amd64 (0.12.2-2build2) ...
367s Setting up libdrm-common (2.4.131-1) ...
367s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
367s Setting up dbus-bin (1.16.2-2ubuntu3) ...
367s Setting up libonig5:amd64 (6.9.10-1build1) ...
367s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
367s Setting up ethtool (1:6.15-3build1) ...
367s Setting up python3-referencing (0.36.2-1ubuntu2) ...
367s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
367s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
367s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
367s Setting up tcpdump (4.99.5-2ubuntu3) ...
367s Setting up linux-image-generic (6.19.0-3.3) ...
367s Setting up wget (1.25.0-2ubuntu4) ...
367s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
367s Setting up iptables (1.8.11-2ubuntu3) ...
367s Setting up iproute2 (6.18.0-1ubuntu1) ...
367s Setting up linux-headers-generic (6.19.0-3.3) ...
367s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
367s Setting up hwdata (0.394-1build1) ...
367s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
367s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
367s No schema files found: doing nothing.
367s Setting up dbus (1.16.2-2ubuntu3) ...
367s A reboot is required to replace the running dbus-daemon.
367s Please reboot the system when convenient.
368s Setting up shared-mime-info (2.4-5build3) ...
368s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
368s Setting up pciutils (1:3.14.0-1build2) ...
368s Setting up python3-markdown-it (3.0.0-3build1) ...
369s Setting up libdrm2:amd64 (2.4.131-1) ...
369s Setting up libpython3.14:amd64 (3.14.2-1) ...
369s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
369s Setting up linux-tools-common (6.19.0-3.3) ...
369s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
369s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
369s Setting up apt (3.1.15) ...
369s Setting up linux-headers-virtual (6.19.0-3.3) ...
369s Setting up linux-generic (6.19.0-3.3) ...
369s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
369s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
369s Setting up ubuntu-standard (1.564) ...
369s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
369s Setting up linux-virtual (6.19.0-3.3) ...
369s Setting up linux-perf (6.19.0-3.3) ...
369s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
369s Processing triggers for debianutils (5.23.2build1) ...
369s Processing triggers for install-info (7.2-5) ...
369s Processing triggers for initramfs-tools (0.150ubuntu7) ...
369s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
374s Processing triggers for libc-bin (2.42-2ubuntu4) ...
374s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
374s /etc/kernel/postinst.d/initramfs-tools:
374s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
378s /etc/kernel/postinst.d/zz-update-grub:
378s Sourcing file `/etc/default/grub'
378s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
378s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
378s Generating grub configuration file ...
378s Found linux image: /boot/vmlinuz-6.19.0-3-generic
378s Found initrd image: /boot/initrd.img-6.19.0-3-generic
378s Found linux image: /boot/vmlinuz-6.18.0-9-generic
378s Found initrd image: /boot/initrd.img-6.18.0-9-generic
378s Warning: os-prober will not be executed to detect other bootable partitions.
378s Systems on them will not be added to the GRUB boot configuration.
378s Check GRUB_DISABLE_OS_PROBER documentation entry.
378s Adding boot menu entry for UEFI Firmware Settings ...
378s done
378s autopkgtest [01:55:43]: upgrading testbed (apt dist-upgrade and autopurge)
379s Reading package lists...
379s Building dependency tree...
379s Reading state information...
380s Calculating upgrade...
380s The following package was automatically installed and is no longer required:
380s   libpython3.13
380s Use 'sudo apt autoremove' to remove it.
380s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
380s Reading package lists...
380s Building dependency tree...
380s Reading state information...
380s Solving dependencies...
380s The following packages will be REMOVED:
380s   libpython3.13*
380s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
380s After this operation, 7599 kB disk space will be freed.
380s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
380s Removing libpython3.13:amd64 (3.13.11-1) ...
380s Processing triggers for libc-bin (2.42-2ubuntu4) ...
381s autopkgtest [01:55:46]: rebooting testbed after setup commands that affected boot
413s Reading package lists...
413s Building dependency tree...
413s Reading state information...
413s Solving dependencies...
413s The following NEW packages will be installed:
413s   build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu
413s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
413s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15
413s   g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15
413s   gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15
413s   gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools
413s   javascript-common libasan8 libblas-dev libblas3 libbz2-dev libc-dev-bin
413s   libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev
413s   libdeflate0 libdrm-intel1 libfontconfig1 libgbm1 libgcc-15-dev
413s   libgfortran-15-dev libgfortran5 libgl1 libgl1-mesa-dri libglu1-mesa
413s   libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b
413s   libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
413s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
413s   libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
413s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
413s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
413s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
413s   liblapack-dev liblapack3 liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3
413s   libncurses-dev libnlopt0 libopengl0 libpango-1.0-0 libpangocairo-1.0-0
413s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpciaccess0 libpcre2-16-0
413s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
413s   libpng-dev libquadmath0 libreadline-dev libsharpyuv0 libsm6 libstdc++-15-dev
413s   libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2
413s   libubsan1 libvulkan1 libwebp7 libx11-xcb1 libxcb-dri3-0 libxcb-glx0
413s   libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1
413s   libxcb-xfixes0 libxft2 libxrender1 libxshmfence1 libxss1 libxt6t64
413s   libxxf86vm1 libzstd-dev linux-libc-dev mesa-libgallium node-bootstrap-sass
413s   node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest
413s   pkgconf pkgconf-bin r-base-core r-base-dev r-cran-abind r-cran-aer
413s   r-cran-backports r-cran-base64enc r-cran-bdsmatrix r-cran-bitops r-cran-boot
413s   r-cran-broom r-cran-bslib r-cran-cachem r-cran-car r-cran-cardata
413s   r-cran-caret r-cran-catools r-cran-class r-cran-cli r-cran-clock
413s   r-cran-codetools r-cran-collapse r-cran-colorspace r-cran-commonmark
413s   r-cran-conquer r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-crosstalk
413s   r-cran-curl r-cran-cvar r-cran-data.table r-cran-dbi r-cran-deriv
413s   r-cran-diagram r-cran-digest r-cran-doby r-cran-dplyr r-cran-dynlm
413s   r-cran-e1071 r-cran-effects r-cran-estimability r-cran-evaluate r-cran-fansi
413s   r-cran-farver r-cran-fastica r-cran-fastmap r-cran-fbasics r-cran-fgarch
413s   r-cran-fontawesome r-cran-foreach r-cran-forecast r-cran-foreign
413s   r-cran-formula r-cran-fracdiff r-cran-fs r-cran-future r-cran-future.apply
413s   r-cran-gbutils r-cran-gdata r-cran-generics r-cran-ggplot2 r-cran-globals
413s   r-cran-glue r-cran-gower r-cran-gplots r-cran-gss r-cran-gtable
413s   r-cran-gtools r-cran-hardhat r-cran-highr r-cran-htmltools
413s   r-cran-htmlwidgets r-cran-httpuv r-cran-insight r-cran-ipred r-cran-isoband
413s   r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth
413s   r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice r-cran-lava
413s   r-cran-lazyeval r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lme4
413s   r-cran-lmtest r-cran-lubridate r-cran-magrittr r-cran-mass r-cran-matrix
413s   r-cran-matrixmodels r-cran-matrixstats r-cran-maxlik r-cran-memoise
413s   r-cran-mgcv r-cran-microbenchmark r-cran-mime r-cran-minqa r-cran-misctools
413s   r-cran-mitools r-cran-modelmetrics r-cran-modelr r-cran-nlme r-cran-nloptr
413s   r-cran-nnet r-cran-numderiv r-cran-parallelly r-cran-pbkrtest r-cran-pillar
413s   r-cran-pkgconfig r-cran-pkgkitten r-cran-plm r-cran-plyr r-cran-proc
413s   r-cran-prodlim r-cran-progressr r-cran-promises r-cran-proxy r-cran-pscl
413s   r-cran-purrr r-cran-quadprog r-cran-quantmod r-cran-quantreg r-cran-r6
413s   r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp
413s   r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rdpack r-cran-recipes
413s   r-cran-reformulas r-cran-reshape2 r-cran-rgl r-cran-rlang r-cran-rmarkdown
413s   r-cran-rocr r-cran-rpart r-cran-sandwich r-cran-sass r-cran-scales
413s   r-cran-scatterplot3d r-cran-shape r-cran-shiny r-cran-sourcetools
413s   r-cran-sparsem r-cran-sparsevctrs r-cran-spatial r-cran-squarem
413s   r-cran-stabledist r-cran-statmod r-cran-stringi r-cran-stringr
413s   r-cran-strucchange r-cran-survey r-cran-survival r-cran-systemfit
413s   r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange
413s   r-cran-timedate r-cran-timeseries r-cran-tinytex r-cran-tseries r-cran-ttr
413s   r-cran-tzdb r-cran-urca r-cran-utf8 r-cran-vctrs r-cran-viridislite
413s   r-cran-withr r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo
413s   rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev
413s 0 upgraded, 335 newly installed, 0 to remove and 0 not upgraded.
413s Need to get 365 MB of archives.
413s After this operation, 1082 MB of additional disk space will be used.
413s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
413s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
414s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
414s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
414s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
414s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
414s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
414s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
415s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
415s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
415s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
415s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
415s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
415s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
415s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
415s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
415s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
415s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
415s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
415s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
415s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
416s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
417s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
417s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
417s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
417s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
418s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
421s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
421s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
421s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
421s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
421s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
421s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
422s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
422s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
422s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
422s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
422s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
422s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
422s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
423s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
423s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
423s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
427s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
427s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
427s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
427s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
427s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
427s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
427s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
427s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
427s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
427s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
427s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
427s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
427s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
427s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
427s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
427s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
427s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu3 [19.0 kB]
427s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-intel1 amd64 2.4.131-1 [66.7 kB]
427s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libx11-xcb1 amd64 2:1.8.12-1build1 [8044 B]
427s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-dri3-0 amd64 1.17.0-2ubuntu1 [7540 B]
427s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-present0 amd64 1.17.0-2ubuntu1 [6112 B]
427s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-randr0 amd64 1.17.0-2ubuntu1 [17.9 kB]
427s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-sync1 amd64 1.17.0-2ubuntu1 [9348 B]
427s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-xfixes0 amd64 1.17.0-2ubuntu1 [10.2 kB]
427s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libxshmfence1 amd64 1.3.3-1build1 [5284 B]
427s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 mesa-libgallium amd64 25.3.3-1ubuntu1 [11.1 MB]
429s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libgbm1 amd64 25.3.3-1ubuntu1 [34.0 kB]
429s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libvulkan1 amd64 1.4.335.0-1 [158 kB]
429s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1-mesa-dri amd64 25.3.3-1ubuntu1 [37.5 kB]
429s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-glx0 amd64 1.17.0-2ubuntu1 [24.7 kB]
429s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libxxf86vm1 amd64 1:1.1.4-2 [10.6 kB]
429s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx-mesa0 amd64 25.3.3-1ubuntu1 [110 kB]
429s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
429s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
429s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
429s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
429s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
431s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
431s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
431s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
431s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
431s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
431s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
431s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
431s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
431s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
431s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
431s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
431s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
431s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
431s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
431s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
431s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
431s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
431s Get:98 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
431s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
431s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
431s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
432s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
432s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
432s Get:104 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
432s Get:105 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
432s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
432s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
432s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
432s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
432s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
432s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
432s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
432s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
432s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
432s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
432s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
432s Get:117 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
432s Get:118 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
432s Get:119 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
432s Get:120 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
432s Get:121 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
432s Get:122 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
432s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
432s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
432s Get:125 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
432s Get:126 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
432s Get:127 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
432s Get:128 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
432s Get:129 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
433s Get:130 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
433s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
433s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
433s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
433s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
433s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
435s Get:136 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
435s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
435s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
435s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
437s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
437s Get:141 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
437s Get:142 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
437s Get:143 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
437s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
437s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
437s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
437s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cardata all 3.0.6-1 [1687 kB]
437s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formula all 1.2-5-1 [158 kB]
437s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
437s Get:150 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-lattice amd64 0.22-9-1 [1399 kB]
437s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
437s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
437s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB]
438s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB]
438s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-boot all 1.3-32-1 [636 kB]
438s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
438s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
438s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
438s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-minqa amd64 1.2.8-1 [119 kB]
438s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnlopt0 amd64 2.7.1-7ubuntu1 [189 kB]
438s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nloptr amd64 2.2.1-2 [251 kB]
438s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
438s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB]
438s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reformulas all 0.4.4-1 [151 kB]
438s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
438s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
438s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB]
439s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lme4 amd64 1.1-38-1 [4197 kB]
439s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-backports amd64 1.5.0-2 [121 kB]
439s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
439s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
439s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
439s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
439s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
439s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
439s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
439s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
439s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
439s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
439s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
439s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
439s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
439s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
439s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
439s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
439s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
439s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
439s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
439s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
439s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-broom all 1.0.12+dfsg-1 [1708 kB]
439s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-numderiv all 2016.8-1.1-3build1 [116 kB]
439s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
439s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
440s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
440s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
440s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
440s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
440s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
440s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
440s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
440s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deriv all 4.2.0-1 [154 kB]
440s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB]
440s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fracdiff amd64 1.5-3-1 [108 kB]
440s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-zoo amd64 1.8-15-1 [1025 kB]
440s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lmtest amd64 0.9.40-1build1 [400 kB]
440s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timedate amd64 4052.112-1 [1298 kB]
440s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quadprog amd64 1.5-8-1build2 [32.6 kB]
440s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xts amd64 0.14.1-1 [1198 kB]
440s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
441s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ttr amd64 0.24.4-1 [511 kB]
441s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
441s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quantmod all 0.4.28-1 [1037 kB]
441s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tseries amd64 0.10-59-3 [382 kB]
441s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-urca amd64 1.3-4-1build1 [1052 kB]
441s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB]
441s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-forecast amd64 8.23.0-1 [1569 kB]
441s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-modelr all 0.1.11-1 [195 kB]
441s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-microbenchmark amd64 1.5.0-1 [67.4 kB]
441s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-doby all 4.7.1-3 [4741 kB]
441s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
441s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
441s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
441s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
441s Get:224 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
442s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
442s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pbkrtest all 0.5.5-1 [217 kB]
442s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB]
442s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixmodels all 0.5-4-1 [351 kB]
442s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB]
442s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
442s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB]
442s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
442s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-e1071 amd64 1.7-17-1 [579 kB]
442s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
442s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
442s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
442s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
443s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build2 [155 kB]
443s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
443s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB]
443s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tzdb amd64 0.5.0-1 [538 kB]
443s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-clock amd64 0.7.2-1 [1903 kB]
443s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB]
443s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sparsevctrs amd64 0.2.0-2 [170 kB]
443s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hardhat all 1.4.2+dfsg-1 [596 kB]
443s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB]
443s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB]
443s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB]
443s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB]
443s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
443s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-globals all 0.19.0-1 [160 kB]
443s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-listenv all 0.10.0+dfsg-1 [113 kB]
443s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB]
443s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB]
443s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
443s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB]
443s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-squarem all 2021.1-1build1 [180 kB]
443s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lava all 1.8.2+dfsg-1 [2210 kB]
443s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB]
443s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB]
443s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timechange amd64 0.3.0-2 [201 kB]
443s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB]
443s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
443s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB]
443s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB]
443s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB]
443s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-quantreg amd64 6.1-1 [1455 kB]
443s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-car all 3.1-5-1 [1526 kB]
443s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sandwich all 3.1-1-1build1 [1483 kB]
443s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-aer all 1.2-15-1 [2607 kB]
444s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
444s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB]
444s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
444s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
444s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
444s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
444s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
444s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
444s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
444s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
444s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
444s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
444s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
444s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-catools amd64 1.18.3-1 [209 kB]
444s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-collapse amd64 2.1.0-1 [3485 kB]
444s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
444s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
444s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
444s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
444s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
444s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
444s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
444s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
444s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
444s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
444s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
444s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crosstalk all 1.2.2+dfsg-1 [181 kB]
444s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gbutils all 0.5.1-2 [317 kB]
444s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cvar all 0.6-3 [139 kB]
444s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB]
444s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dynlm all 0.3.6-2build2 [55.2 kB]
444s Get:302 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mitools all 2.4-2build2 [266 kB]
444s Get:303 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survey amd64 4.4-2-2 [3453 kB]
444s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-estimability all 1.5.1-1 [50.9 kB]
444s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-insight all 1.4.4+dfsg-1 [2367 kB]
444s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-effects all 4.2.4-1 [2350 kB]
444s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastica amd64 1.2-7-1 [46.6 kB]
444s Get:308 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-timeseries all 4052.112-1 [1981 kB]
444s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-spatial amd64 7.3-18-1 [137 kB]
444s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gss amd64 2.2-10-1 [1677 kB]
445s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stabledist all 0.7-2-1 [78.7 kB]
445s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fbasics amd64 4052.98-1 [1507 kB]
445s Get:313 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fgarch amd64 4052.93-1 [680 kB]
445s Get:314 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreign amd64 0.8.91-1 [245 kB]
445s Get:315 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtools amd64 3.9.5-1build1 [345 kB]
445s Get:316 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gdata all 3.0.1-1build1 [491 kB]
445s Get:317 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gplots all 3.3.0-1 [3825 kB]
445s Get:318 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
445s Get:319 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
445s Get:320 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
445s Get:321 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
445s Get:322 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-misctools all 0.6-28-1 [99.9 kB]
445s Get:323 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-maxlik all 1.5-2.2-1 [1115 kB]
445s Get:324 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plm all 2.6-7-1 [1823 kB]
445s Get:325 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pscl amd64 1.5.9-1 [3381 kB]
445s Get:326 http://ftpmaster.internal/ubuntu resolute/main amd64 libglvnd0 amd64 1.7.0-3 [64.1 kB]
445s Get:327 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx0 amd64 1.7.0-3 [38.9 kB]
445s Get:328 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1 amd64 1.7.0-3 [98.3 kB]
445s Get:329 http://ftpmaster.internal/ubuntu resolute/main amd64 libopengl0 amd64 1.7.0-3 [32.8 kB]
445s Get:330 http://ftpmaster.internal/ubuntu resolute/universe amd64 libglu1-mesa amd64 9.0.2-1.1build2 [159 kB]
445s Get:331 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rgl amd64 1.3.34-1 [4182 kB]
445s Get:332 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rocr all 1.0-12-1 [465 kB]
445s Get:333 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scatterplot3d all 0.3-44-1 [349 kB]
445s Get:334 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-strucchange amd64 1.5-4-1build1 [944 kB]
445s Get:335 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-systemfit all 1.1-30-1 [1174 kB]
446s Preconfiguring packages ...
446s Fetched 365 MB in 32s (11.4 MB/s)
446s Selecting previously unselected package libc-dev-bin.
446s (Reading database ... 
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(Reading database ... 125269 files and directories currently installed.)
446s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
446s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
446s Selecting previously unselected package linux-libc-dev:amd64.
446s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ...
446s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
446s Selecting previously unselected package libcrypt-dev:amd64.
446s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
446s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
446s Selecting previously unselected package rpcsvc-proto.
446s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
446s Unpacking rpcsvc-proto (1.4.3-1build1) ...
446s Selecting previously unselected package libc6-dev:amd64.
446s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ...
446s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
446s Selecting previously unselected package libisl23:amd64.
446s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ...
446s Unpacking libisl23:amd64 (0.27-1build1) ...
446s Selecting previously unselected package libmpc3:amd64.
446s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ...
446s Unpacking libmpc3:amd64 (1.3.1-2) ...
446s Selecting previously unselected package cpp-15-x86-64-linux-gnu.
446s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
446s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
446s Selecting previously unselected package cpp-15.
446s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ...
446s Unpacking cpp-15 (15.2.0-12ubuntu1) ...
446s Selecting previously unselected package cpp-x86-64-linux-gnu.
446s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
446s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
446s Selecting previously unselected package cpp.
446s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ...
446s Unpacking cpp (4:15.2.0-4ubuntu1) ...
446s Selecting previously unselected package libcc1-0:amd64.
446s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ...
446s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ...
446s Selecting previously unselected package libgomp1:amd64.
446s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
446s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
446s Selecting previously unselected package libitm1:amd64.
446s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ...
446s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ...
446s Selecting previously unselected package libasan8:amd64.
446s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ...
446s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ...
447s Selecting previously unselected package liblsan0:amd64.
447s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ...
447s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ...
447s Selecting previously unselected package libtsan2:amd64.
447s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ...
447s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ...
447s Selecting previously unselected package libubsan1:amd64.
447s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
447s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ...
447s Selecting previously unselected package libhwasan0:amd64.
447s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ...
447s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ...
447s Selecting previously unselected package libquadmath0:amd64.
447s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ...
447s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ...
447s Selecting previously unselected package libgcc-15-dev:amd64.
447s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ...
447s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
447s Selecting previously unselected package gcc-15-x86-64-linux-gnu.
447s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
447s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
447s Selecting previously unselected package gcc-15.
447s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ...
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447s Selecting previously unselected package gcc-x86-64-linux-gnu.
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447s Selecting previously unselected package libstdc++-15-dev:amd64.
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447s Selecting previously unselected package g++-15-x86-64-linux-gnu.
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447s Selecting previously unselected package g++-15.
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447s Selecting previously unselected package build-essential.
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447s Selecting previously unselected package dctrl-tools.
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447s Selecting previously unselected package fonts-dejavu-mono.
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448s Selecting previously unselected package fonts-glyphicons-halflings.
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448s Selecting previously unselected package fonts-mathjax.
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448s Selecting previously unselected package libgfortran5:amd64.
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448s Selecting previously unselected package gfortran-15.
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448s Selecting previously unselected package gfortran-x86-64-linux-gnu.
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448s Selecting previously unselected package gfortran.
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448s Selecting previously unselected package icu-devtools.
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448s Selecting previously unselected package javascript-common.
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448s Selecting previously unselected package libblas3:amd64.
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448s Preparing to unpack .../050-libbz2-dev_1.0.8-6build2_amd64.deb ...
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448s Selecting previously unselected package libpixman-1-0:amd64.
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448s Selecting previously unselected package libxcb-render0:amd64.
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448s Selecting previously unselected package libxrender1:amd64.
448s Preparing to unpack .../054-libxrender1_1%3a0.9.12-1_amd64.deb ...
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448s Selecting previously unselected package libcairo2:amd64.
448s Preparing to unpack .../055-libcairo2_1.18.4-3_amd64.deb ...
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448s Selecting previously unselected package libdatrie1:amd64.
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448s Selecting previously unselected package libdeflate0:amd64.
448s Preparing to unpack .../057-libdeflate0_1.23-2build1_amd64.deb ...
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448s Selecting previously unselected package libpciaccess0:amd64.
448s Preparing to unpack .../059-libpciaccess0_0.18.1-1ubuntu3_amd64.deb ...
448s Unpacking libpciaccess0:amd64 (0.18.1-1ubuntu3) ...
448s Selecting previously unselected package libdrm-intel1:amd64.
448s Preparing to unpack .../060-libdrm-intel1_2.4.131-1_amd64.deb ...
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448s Selecting previously unselected package libx11-xcb1:amd64.
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448s Selecting previously unselected package libxcb-dri3-0:amd64.
448s Preparing to unpack .../062-libxcb-dri3-0_1.17.0-2ubuntu1_amd64.deb ...
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448s Selecting previously unselected package libxcb-present0:amd64.
448s Preparing to unpack .../063-libxcb-present0_1.17.0-2ubuntu1_amd64.deb ...
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448s Selecting previously unselected package libxcb-randr0:amd64.
448s Preparing to unpack .../064-libxcb-randr0_1.17.0-2ubuntu1_amd64.deb ...
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448s Selecting previously unselected package libxcb-sync1:amd64.
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448s Selecting previously unselected package libxcb-xfixes0:amd64.
448s Preparing to unpack .../066-libxcb-xfixes0_1.17.0-2ubuntu1_amd64.deb ...
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448s Selecting previously unselected package libxshmfence1:amd64.
448s Preparing to unpack .../067-libxshmfence1_1.3.3-1build1_amd64.deb ...
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448s Selecting previously unselected package mesa-libgallium:amd64.
448s Preparing to unpack .../068-mesa-libgallium_25.3.3-1ubuntu1_amd64.deb ...
448s Unpacking mesa-libgallium:amd64 (25.3.3-1ubuntu1) ...
448s Selecting previously unselected package libgbm1:amd64.
448s Preparing to unpack .../069-libgbm1_25.3.3-1ubuntu1_amd64.deb ...
448s Unpacking libgbm1:amd64 (25.3.3-1ubuntu1) ...
448s Selecting previously unselected package libvulkan1:amd64.
448s Preparing to unpack .../070-libvulkan1_1.4.335.0-1_amd64.deb ...
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448s Selecting previously unselected package libgl1-mesa-dri:amd64.
448s Preparing to unpack .../071-libgl1-mesa-dri_25.3.3-1ubuntu1_amd64.deb ...
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448s Selecting previously unselected package libxcb-glx0:amd64.
448s Preparing to unpack .../072-libxcb-glx0_1.17.0-2ubuntu1_amd64.deb ...
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448s Selecting previously unselected package libxxf86vm1:amd64.
448s Preparing to unpack .../073-libxxf86vm1_1%3a1.1.4-2_amd64.deb ...
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448s Selecting previously unselected package libglx-mesa0:amd64.
448s Preparing to unpack .../074-libglx-mesa0_25.3.3-1ubuntu1_amd64.deb ...
448s Unpacking libglx-mesa0:amd64 (25.3.3-1ubuntu1) ...
448s Selecting previously unselected package libgraphite2-3:amd64.
448s Preparing to unpack .../075-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ...
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448s Selecting previously unselected package libharfbuzz0b:amd64.
448s Preparing to unpack .../076-libharfbuzz0b_12.3.2-1_amd64.deb ...
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448s Selecting previously unselected package x11-common.
448s Preparing to unpack .../077-x11-common_1%3a7.7+24ubuntu1_all.deb ...
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449s Selecting previously unselected package libice6:amd64.
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449s Selecting previously unselected package libicu-dev:amd64.
449s Preparing to unpack .../079-libicu-dev_78.2-1ubuntu1_amd64.deb ...
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449s Selecting previously unselected package libjpeg-turbo8:amd64.
449s Preparing to unpack .../080-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ...
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449s Selecting previously unselected package libjpeg8:amd64.
449s Preparing to unpack .../082-libjpeg8_8c-2ubuntu12_amd64.deb ...
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449s Selecting previously unselected package libjpeg8-dev:amd64.
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449s Selecting previously unselected package libjs-bootstrap.
449s Preparing to unpack .../085-libjs-bootstrap_3.4.1+dfsg-6_all.deb ...
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449s Selecting previously unselected package libjs-popper.js.
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449s Selecting previously unselected package libjs-bootstrap4.
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449s Selecting previously unselected package libjs-es5-shim.
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449s Selecting previously unselected package libjs-jquery.
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449s Selecting previously unselected package libjs-jquery-datatables.
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449s Selecting previously unselected package libjs-jquery-selectize.js.
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449s Selecting previously unselected package liblapack3:amd64.
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449s Selecting previously unselected package liblerc4:amd64.
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449s Selecting previously unselected package liblua5.4-0:amd64.
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449s Selecting previously unselected package libthai-data.
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449s Selecting previously unselected package libpango-1.0-0:amd64.
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449s Selecting previously unselected package libpangoft2-1.0-0:amd64.
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449s Selecting previously unselected package libpcre2-16-0:amd64.
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449s Selecting previously unselected package libpng-dev:amd64.
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453s Selecting previously unselected package r-cran-class.
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453s Selecting previously unselected package r-cran-proxy.
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453s Selecting previously unselected package r-cran-e1071.
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453s Selecting previously unselected package r-cran-codetools.
453s Preparing to unpack .../233-r-cran-codetools_0.2-20-1build1_all.deb ...
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453s Selecting previously unselected package r-cran-iterators.
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453s Selecting previously unselected package r-cran-data.table.
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453s Selecting previously unselected package r-cran-modelmetrics.
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453s Selecting previously unselected package r-cran-plyr.
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453s Selecting previously unselected package r-cran-proc.
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453s Selecting previously unselected package r-cran-tzdb.
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453s Selecting previously unselected package r-cran-gower.
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453s Selecting previously unselected package r-cran-sparsevctrs.
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454s Selecting previously unselected package r-cran-hardhat.
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454s Selecting previously unselected package r-cran-rpart.
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454s Selecting previously unselected package r-cran-lava.
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454s Selecting previously unselected package r-cran-ipred.
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454s Selecting previously unselected package r-cran-lubridate.
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454s Selecting previously unselected package r-cran-reshape2.
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454s Selecting previously unselected package r-cran-caret.
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454s Selecting previously unselected package r-cran-conquer.
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454s Selecting previously unselected package r-cran-car.
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454s Selecting previously unselected package r-cran-sandwich.
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454s Selecting previously unselected package r-cran-aer.
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454s Selecting previously unselected package r-cran-bdsmatrix.
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454s Selecting previously unselected package r-cran-bitops.
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454s Selecting previously unselected package r-cran-fastmap.
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454s Selecting previously unselected package r-cran-htmltools.
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454s Selecting previously unselected package r-cran-memoise.
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454s Selecting previously unselected package r-cran-rappdirs.
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454s Selecting previously unselected package r-cran-catools.
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455s Selecting previously unselected package r-cran-shiny.
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455s Selecting previously unselected package r-cran-spatial.
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459s Setting up r-cran-prodlim (2024.06.25-1) ...
459s Setting up r-cran-fbasics (4052.98-1) ...
459s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
459s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
459s Setting up r-cran-rpart (4.1.24-1build1) ...
459s Setting up r-cran-plm (2.6-7-1) ...
459s Setting up r-cran-ipred (0.9-15-1) ...
459s Setting up r-cran-lme4 (1.1-38-1) ...
459s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
459s Setting up r-cran-tidyr (1.3.1-1) ...
459s Setting up r-cran-recipes (1.1.0+dfsg-1) ...
459s Setting up r-cran-fgarch (4052.93-1) ...
459s Setting up r-cran-quantmod (0.4.28-1) ...
459s Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
459s Setting up r-cran-effects (4.2.4-1) ...
459s Setting up r-cran-caret (7.0-1+dfsg-1) ...
459s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
459s Setting up r-cran-tseries (0.10-59-3) ...
459s Setting up r-cran-broom (1.0.12+dfsg-1) ...
459s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
459s Setting up r-cran-conquer (1.3.3-1) ...
459s Setting up r-cran-forecast (8.23.0-1) ...
459s Setting up r-cran-crosstalk (1.2.2+dfsg-1) ...
459s Setting up r-cran-quantreg (6.1-1) ...
459s Setting up r-cran-modelr (0.1.11-1) ...
459s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
459s Setting up r-cran-rgl (1.3.34-1) ...
459s Setting up r-cran-doby (4.7.1-3) ...
459s Setting up r-cran-pbkrtest (0.5.5-1) ...
459s Setting up r-cran-car (3.1-5-1) ...
459s Setting up r-cran-aer (1.2-15-1) ...
459s Setting up r-cran-dynlm (0.3.6-2build2) ...
459s Setting up r-cran-systemfit (1.1-30-1) ...
459s Processing triggers for man-db (2.13.1-1build1) ...
460s Processing triggers for install-info (7.2-5) ...
460s Processing triggers for libc-bin (2.42-2ubuntu4) ...
463s autopkgtest [01:57:08]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
463s autopkgtest [01:57:08]: test pkg-r-autopkgtest: [-----------------------
463s Test: Try to load the R library AER
463s 
463s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
463s Copyright (C) 2025 The R Foundation for Statistical Computing
463s Platform: x86_64-pc-linux-gnu
463s 
463s R is free software and comes with ABSOLUTELY NO WARRANTY.
463s You are welcome to redistribute it under certain conditions.
463s Type 'license()' or 'licence()' for distribution details.
463s 
463s R is a collaborative project with many contributors.
463s Type 'contributors()' for more information and
463s 'citation()' on how to cite R or R packages in publications.
463s 
463s Type 'demo()' for some demos, 'help()' for on-line help, or
463s 'help.start()' for an HTML browser interface to help.
463s Type 'q()' to quit R.
463s 
463s > library('AER')
463s Loading required package: car
463s Loading required package: carData
463s Loading required package: lmtest
463s Loading required package: zoo
463s 
463s Attaching package: ‘zoo’
463s 
463s The following objects are masked from ‘package:base’:
463s 
463s     as.Date, as.Date.numeric
463s 
463s Loading required package: sandwich
463s Loading required package: survival
464s > 
464s autopkgtest [01:57:09]: test pkg-r-autopkgtest: -----------------------]
465s autopkgtest [01:57:10]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
465s pkg-r-autopkgtest    PASS
465s autopkgtest [01:57:10]: @@@@@@@@@@@@@@@@@@@@ summary
465s run-unit-test        PASS
465s pkg-r-autopkgtest    PASS