0s autopkgtest [04:19:04]: starting date and time: 2026-02-10 04:19:04+0000
  0s autopkgtest [04:19:04]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [04:19:04]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5m6lgubd/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-scater --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-17.secgroup --name adt-resolute-amd64-r-bioc-scater-20260210-041903-juju-7f2275-prod-proposed-migration-environment-15-d0c74724-2eec-4c41-8dd5-edebdbaf636e --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  3s Creating nova instance adt-resolute-amd64-r-bioc-scater-20260210-041903-juju-7f2275-prod-proposed-migration-environment-15-d0c74724-2eec-4c41-8dd5-edebdbaf636e from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 73s autopkgtest [04:20:17]: testbed dpkg architecture: amd64
 73s autopkgtest [04:20:17]: testbed apt version: 3.1.14
 73s autopkgtest [04:20:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 73s autopkgtest [04:20:17]: testbed release detected to be: None
 74s autopkgtest [04:20:18]: updating testbed package index (apt update)
 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 74s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 74s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 74s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB]
 74s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [181 kB]
 74s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1735 kB]
 75s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [268 kB]
 75s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [220 kB]
 75s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5980 B]
 75s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B]
 75s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [768 kB]
 75s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1791 kB]
 75s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.6 kB]
 75s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB]
 75s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B]
 75s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 76s Fetched 5189 kB in 1s (4209 kB/s)
 77s Reading package lists...
 77s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 77s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 77s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 77s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 78s Reading package lists...
 78s Reading package lists...
 78s Building dependency tree...
 78s Reading state information...
 78s Calculating upgrade...
 78s The following package was automatically installed and is no longer required:
 78s   libpython3.13
 78s Use 'sudo apt autoremove' to remove it.
 78s The following NEW packages will be installed:
 78s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 78s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 78s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 78s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 78s The following packages will be upgraded:
 78s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 78s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 78s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 78s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 78s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0
 78s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 78s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 78s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 78s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 78s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 78s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 78s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 78s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 78s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 78s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 78s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 78s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 78s Need to get 237 MB of archives.
 78s After this operation, 339 MB of additional disk space will be used.
 78s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 78s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 78s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 78s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 78s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 78s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 78s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 78s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 78s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 78s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 78s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 79s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 79s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 79s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 79s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 79s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 79s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 79s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 79s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 79s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 79s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 79s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 79s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 79s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 79s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 79s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 79s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 79s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 79s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 79s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 79s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 79s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 79s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 79s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 79s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 79s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 79s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 79s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 79s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 79s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 79s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 79s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 79s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 79s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 79s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 79s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 79s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 79s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 79s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 79s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 79s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 79s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 79s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 79s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 79s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 79s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 79s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 79s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 79s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 79s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 79s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 79s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 79s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 79s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 79s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 79s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 79s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 79s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 79s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 79s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 79s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 79s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 79s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 79s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 79s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 79s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 79s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 79s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 79s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 79s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 80s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 80s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 86s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 86s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 86s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 86s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 86s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 86s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 86s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 86s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 87s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 87s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 87s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 87s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 87s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 87s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 87s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 87s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 87s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 87s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 87s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 87s Fetched 237 MB in 9s (26.2 MB/s)
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 88s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 88s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 88s Setting up debianutils (5.23.2build1) ...
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 88s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 88s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
 88s Setting up dash (0.5.12-12ubuntu3) ...
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 88s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
 88s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
 88s Setting up findutils (4.10.0-3build2) ...
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 88s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
 88s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
 88s Setting up sed (4.9-2build3) ...
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 88s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
 88s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
 88s Setting up tar (1.35+dfsg-3.1build2) ...
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 88s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ...
 88s Unpacking libattr1:amd64 (1:2.5.2-3build2) over (1:2.5.2-3build1) ...
 88s Setting up libattr1:amd64 (1:2.5.2-3build2) ...
 88s Selecting previously unselected package gcc-16-base:amd64.
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 88s Preparing to unpack .../gcc-16-base_16-20260208-1ubuntu1_amd64.deb ...
 88s Unpacking gcc-16-base:amd64 (16-20260208-1ubuntu1) ...
 88s Setting up gcc-16-base:amd64 (16-20260208-1ubuntu1) ...
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83962 files and directories currently installed.)
 88s Preparing to unpack .../libgcc-s1_16-20260208-1ubuntu1_amd64.deb ...
 88s Unpacking libgcc-s1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 88s Setting up libgcc-s1:amd64 (16-20260208-1ubuntu1) ...
 88s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83962 files and directories currently installed.)
 88s Preparing to unpack .../00-libbsd0_0.12.2-2build2_amd64.deb ...
 88s Unpacking libbsd0:amd64 (0.12.2-2build2) over (0.12.2-2build1) ...
 88s Preparing to unpack .../01-mawk_1.3.4.20260129-1_amd64.deb ...
 88s Unpacking mawk (1.3.4.20260129-1) over (1.3.4.20250131-2) ...
 88s Preparing to unpack .../02-libstdc++6_16-20260208-1ubuntu1_amd64.deb ...
 89s Unpacking libstdc++6:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 89s Preparing to unpack .../03-libapt-pkg7.0_3.1.15_amd64.deb ...
 89s Unpacking libapt-pkg7.0:amd64 (3.1.15) over (3.1.14) ...
 89s Preparing to unpack .../04-apt_3.1.15_amd64.deb ...
 89s Unpacking apt (3.1.15) over (3.1.14) ...
 89s Preparing to unpack .../05-dbus-system-bus-common_1.16.2-2ubuntu3_all.deb ...
 89s Unpacking dbus-system-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 89s Preparing to unpack .../06-dbus-session-bus-common_1.16.2-2ubuntu3_all.deb ...
 89s Unpacking dbus-session-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 89s Preparing to unpack .../07-dbus-user-session_1.16.2-2ubuntu3_amd64.deb ...
 89s Unpacking dbus-user-session (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 89s Preparing to unpack .../08-dbus-daemon_1.16.2-2ubuntu3_amd64.deb ...
 89s Unpacking dbus-daemon (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 89s Preparing to unpack .../09-dbus-bin_1.16.2-2ubuntu3_amd64.deb ...
 89s Unpacking dbus-bin (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 89s Preparing to unpack .../10-dbus_1.16.2-2ubuntu3_amd64.deb ...
 89s Unpacking dbus (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 89s Preparing to unpack .../11-libdbus-1-3_1.16.2-2ubuntu3_amd64.deb ...
 89s Unpacking libdbus-1-3:amd64 (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 89s Preparing to unpack .../12-libdevmapper1.02.1_2%3a1.02.205-2ubuntu3_amd64.deb ...
 89s Unpacking libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ...
 89s Preparing to unpack .../13-dmsetup_2%3a1.02.205-2ubuntu3_amd64.deb ...
 89s Unpacking dmsetup (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ...
 89s Preparing to unpack .../14-ethtool_1%3a6.15-3build1_amd64.deb ...
 89s Unpacking ethtool (1:6.15-3build1) over (1:6.15-3) ...
 89s Preparing to unpack .../15-gir1.2-girepository-3.0_2.87.2-2_amd64.deb ...
 89s Unpacking gir1.2-girepository-3.0:amd64 (2.87.2-2) over (2.86.3-4) ...
 89s Preparing to unpack .../16-libgirepository-2.0-0_2.87.2-2_amd64.deb ...
 89s Unpacking libgirepository-2.0-0:amd64 (2.87.2-2) over (2.86.3-4) ...
 89s Preparing to unpack .../17-libatomic1_16-20260208-1ubuntu1_amd64.deb ...
 89s Unpacking libatomic1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 89s Preparing to unpack .../18-gir1.2-glib-2.0_2.87.2-2_amd64.deb ...
 89s Unpacking gir1.2-glib-2.0:amd64 (2.87.2-2) over (2.86.3-4) ...
 89s Preparing to unpack .../19-libglib2.0-0t64_2.87.2-2_amd64.deb ...
 89s Unpacking libglib2.0-0t64:amd64 (2.87.2-2) over (2.86.3-4) ...
 89s Preparing to unpack .../20-libbpf1_1%3a1.6.2-1build1_amd64.deb ...
 89s Unpacking libbpf1:amd64 (1:1.6.2-1build1) over (1:1.6.2-1) ...
 89s Preparing to unpack .../21-iptables_1.8.11-2ubuntu3_amd64.deb ...
 89s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 89s Preparing to unpack .../22-libip4tc2_1.8.11-2ubuntu3_amd64.deb ...
 89s Unpacking libip4tc2:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 89s Preparing to unpack .../23-libip6tc2_1.8.11-2ubuntu3_amd64.deb ...
 89s Unpacking libip6tc2:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 89s Preparing to unpack .../24-libnetfilter-conntrack3_1.1.1-1_amd64.deb ...
 89s Unpacking libnetfilter-conntrack3:amd64 (1.1.1-1) over (1.1.0-1build1) ...
 89s Preparing to unpack .../25-libxtables12_1.8.11-2ubuntu3_amd64.deb ...
 89s Unpacking libxtables12:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 89s Preparing to unpack .../26-iproute2_6.18.0-1ubuntu1_amd64.deb ...
 89s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ...
 90s Preparing to unpack .../27-less_668-1build1_amd64.deb ...
 90s Unpacking less (668-1build1) over (668-1) ...
 90s Preparing to unpack .../28-libcryptsetup12_2%3a2.8.0-1ubuntu3_amd64.deb ...
 90s Unpacking libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ...
 90s Preparing to unpack .../29-libglib2.0-data_2.87.2-2_all.deb ...
 90s Unpacking libglib2.0-data (2.87.2-2) over (2.86.3-4) ...
 90s Preparing to unpack .../30-libidn2-0_2.3.8-4build1_amd64.deb ...
 90s Unpacking libidn2-0:amd64 (2.3.8-4build1) over (2.3.8-4) ...
 90s Preparing to unpack .../31-libkeyutils1_1.6.3-6ubuntu3_amd64.deb ...
 90s Unpacking libkeyutils1:amd64 (1.6.3-6ubuntu3) over (1.6.3-6ubuntu2) ...
 90s Preparing to unpack .../32-python3-linkify-it_2.0.3-1ubuntu3_all.deb ...
 90s Unpacking python3-linkify-it (2.0.3-1ubuntu3) over (2.0.3-1ubuntu2) ...
 90s Preparing to unpack .../33-python3-markdown-it_3.0.0-3build1_all.deb ...
 90s Unpacking python3-markdown-it (3.0.0-3build1) over (3.0.0-3) ...
 90s Preparing to unpack .../34-shared-mime-info_2.4-5build3_amd64.deb ...
 90s Unpacking shared-mime-info (2.4-5build3) over (2.4-5build2) ...
 90s Preparing to unpack .../35-busybox-static_1%3a1.37.0-7ubuntu1_amd64.deb ...
 90s Unpacking busybox-static (1:1.37.0-7ubuntu1) over (1:1.37.0-4ubuntu1) ...
 90s Preparing to unpack .../36-libdrm-common_2.4.131-1_all.deb ...
 90s Unpacking libdrm-common (2.4.131-1) over (2.4.129-1) ...
 90s Preparing to unpack .../37-libdrm2_2.4.131-1_amd64.deb ...
 90s Unpacking libdrm2:amd64 (2.4.131-1) over (2.4.129-1) ...
 90s Preparing to unpack .../38-libgdbm6t64_1.26-1build1_amd64.deb ...
 90s Unpacking libgdbm6t64:amd64 (1.26-1build1) over (1.26-1) ...
 90s Preparing to unpack .../39-libgpm2_1.20.7-12build1_amd64.deb ...
 90s Unpacking libgpm2:amd64 (1.20.7-12build1) over (1.20.7-12) ...
 90s Preparing to unpack .../40-libjansson4_2.14-2build4_amd64.deb ...
 90s Unpacking libjansson4:amd64 (2.14-2build4) over (2.14-2build3) ...
 90s Preparing to unpack .../41-lsof_4.99.4+dfsg-2build2_amd64.deb ...
 90s Unpacking lsof (4.99.4+dfsg-2build2) over (4.99.4+dfsg-2build1) ...
 90s Preparing to unpack .../42-liblsof0_4.99.4+dfsg-2build2_amd64.deb ...
 90s Unpacking liblsof0 (4.99.4+dfsg-2build2) over (4.99.4+dfsg-2build1) ...
 90s Preparing to unpack .../43-libmaxminddb0_1.12.2-1build2_amd64.deb ...
 90s Unpacking libmaxminddb0:amd64 (1.12.2-1build2) over (1.12.2-1build1) ...
 90s Preparing to unpack .../44-libpcap0.8t64_1.10.5-2ubuntu3_amd64.deb ...
 90s Unpacking libpcap0.8t64:amd64 (1.10.5-2ubuntu3) over (1.10.5-2ubuntu2) ...
 90s Preparing to unpack .../45-pciutils_1%3a3.14.0-1build2_amd64.deb ...
 90s Unpacking pciutils (1:3.14.0-1build2) over (1:3.14.0-1build1) ...
 90s Preparing to unpack .../46-libpci3_1%3a3.14.0-1build2_amd64.deb ...
 90s Unpacking libpci3:amd64 (1:3.14.0-1build2) over (1:3.14.0-1build1) ...
 90s Preparing to unpack .../47-libsensors-config_1%3a3.6.2-2build1_all.deb ...
 90s Unpacking libsensors-config (1:3.6.2-2build1) over (1:3.6.2-2) ...
 90s Preparing to unpack .../48-libsensors5_1%3a3.6.2-2build1_amd64.deb ...
 90s Unpacking libsensors5:amd64 (1:3.6.2-2build1) over (1:3.6.2-2) ...
 90s Preparing to unpack .../49-libusb-1.0-0_2%3a1.0.29-2build1_amd64.deb ...
 90s Unpacking libusb-1.0-0:amd64 (2:1.0.29-2build1) over (2:1.0.29-2) ...
 90s Preparing to unpack .../50-libxau6_1%3a1.0.11-1build2_amd64.deb ...
 90s Unpacking libxau6:amd64 (1:1.0.11-1build2) over (1:1.0.11-1build1) ...
 90s Preparing to unpack .../51-libxkbcommon0_1.13.1-1_amd64.deb ...
 91s Unpacking libxkbcommon0:amd64 (1.13.1-1) over (1.12.3-1) ...
 91s Preparing to unpack .../52-man-db_2.13.1-1build1_amd64.deb ...
 91s Unpacking man-db (2.13.1-1build1) over (2.13.1-1) ...
 91s Preparing to unpack .../53-tcpdump_4.99.5-2ubuntu3_amd64.deb ...
 91s Unpacking tcpdump (4.99.5-2ubuntu3) over (4.99.5-2ubuntu2) ...
 91s Preparing to unpack .../54-wget_1.25.0-2ubuntu4_amd64.deb ...
 91s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ...
 91s Preparing to unpack .../55-ubuntu-standard_1.564_amd64.deb ...
 91s Unpacking ubuntu-standard (1.564) over (1.563) ...
 91s Preparing to unpack .../56-3cpio_0.14.0-1ubuntu1_amd64.deb ...
 91s Unpacking 3cpio (0.14.0-1ubuntu1) over (0.13.1-1ubuntu1) ...
 91s Preparing to unpack .../57-bpftool_7.7.0+6.19.0-3.3_amd64.deb ...
 91s Unpacking bpftool (7.7.0+6.19.0-3.3) over (7.7.0+6.18.0-9.9) ...
 91s Preparing to unpack .../58-busybox-initramfs_1%3a1.37.0-7ubuntu1_amd64.deb ...
 91s Unpacking busybox-initramfs (1:1.37.0-7ubuntu1) over (1:1.37.0-4ubuntu1) ...
 91s Preparing to unpack .../59-cryptsetup-bin_2%3a2.8.0-1ubuntu3_amd64.deb ...
 91s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ...
 91s Preparing to unpack .../60-dracut-install_109-11ubuntu1_amd64.deb ...
 91s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ...
 91s Preparing to unpack .../61-hwdata_0.394-1build1_all.deb ...
 91s Unpacking hwdata (0.394-1build1) over (0.394-1) ...
 91s Preparing to unpack .../62-pnp.ids_0.394-1build1_all.deb ...
 91s Unpacking pnp.ids (0.394-1build1) over (0.394-1) ...
 91s Preparing to unpack .../63-libdrm-amdgpu1_2.4.131-1_amd64.deb ...
 91s Unpacking libdrm-amdgpu1:amd64 (2.4.131-1) over (2.4.129-1) ...
 91s Preparing to unpack .../64-libevent-core-2.1-7t64_2.1.12-stable-10build2_amd64.deb ...
 91s Unpacking libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) over (2.1.12-stable-10build1) ...
 91s Preparing to unpack .../65-libgdbm-compat4t64_1.26-1build1_amd64.deb ...
 91s Unpacking libgdbm-compat4t64:amd64 (1.26-1build1) over (1.26-1) ...
 91s Preparing to unpack .../66-libgudev-1.0-0_1%3a238-7build1_amd64.deb ...
 91s Unpacking libgudev-1.0-0:amd64 (1:238-7build1) over (1:238-7) ...
 91s Preparing to unpack .../67-libnpth0t64_1.8-3build1_amd64.deb ...
 91s Unpacking libnpth0t64:amd64 (1.8-3build1) over (1.8-3) ...
 91s Preparing to unpack .../68-libonig5_6.9.10-1build1_amd64.deb ...
 91s Unpacking libonig5:amd64 (6.9.10-1build1) over (6.9.10-1) ...
 91s Selecting previously unselected package libpython3.14-minimal:amd64.
 91s Preparing to unpack .../69-libpython3.14-minimal_3.14.2-1_amd64.deb ...
 91s Unpacking libpython3.14-minimal:amd64 (3.14.2-1) ...
 91s Selecting previously unselected package libpython3.14-stdlib:amd64.
 91s Preparing to unpack .../70-libpython3.14-stdlib_3.14.2-1_amd64.deb ...
 91s Unpacking libpython3.14-stdlib:amd64 (3.14.2-1) ...
 91s Selecting previously unselected package libpython3.14:amd64.
 91s Preparing to unpack .../71-libpython3.14_3.14.2-1_amd64.deb ...
 91s Unpacking libpython3.14:amd64 (3.14.2-1) ...
 91s Preparing to unpack .../72-libwrap0_7.6.q-36build2_amd64.deb ...
 91s Unpacking libwrap0:amd64 (7.6.q-36build2) over (7.6.q-36build1) ...
 91s Selecting previously unselected package linux-modules-6.19.0-3-generic.
 91s Preparing to unpack .../73-linux-modules-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
 91s Unpacking linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
 92s Selecting previously unselected package linux-image-6.19.0-3-generic.
 92s Preparing to unpack .../74-linux-image-6.19.0-3-generic_6.19.0-3.3+1_amd64.deb ...
 92s Unpacking linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
 92s Preparing to unpack .../75-amd64-microcode_3.20251202.1ubuntu1_amd64.deb ...
 92s Unpacking amd64-microcode (3.20251202.1ubuntu1) over (3.20250708.1ubuntu1) ...
 92s Preparing to unpack .../76-linux-generic_6.19.0-3.3_amd64.deb ...
 92s Unpacking linux-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
 92s Preparing to unpack .../77-linux-image-generic_6.19.0-3.3_amd64.deb ...
 92s Unpacking linux-image-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
 92s Preparing to unpack .../78-linux-virtual_6.19.0-3.3_amd64.deb ...
 92s Unpacking linux-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
 92s Preparing to unpack .../79-linux-image-virtual_6.19.0-3.3_amd64.deb ...
 92s Unpacking linux-image-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
 92s Preparing to unpack .../80-linux-headers-virtual_6.19.0-3.3_amd64.deb ...
 92s Unpacking linux-headers-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
 92s Selecting previously unselected package linux-headers-6.19.0-3.
 92s Preparing to unpack .../81-linux-headers-6.19.0-3_6.19.0-3.3_all.deb ...
 92s Unpacking linux-headers-6.19.0-3 (6.19.0-3.3) ...
 94s Selecting previously unselected package linux-headers-6.19.0-3-generic.
 94s Preparing to unpack .../82-linux-headers-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
 94s Unpacking linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
 94s Preparing to unpack .../83-linux-headers-generic_6.19.0-3.3_amd64.deb ...
 94s Unpacking linux-headers-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
 94s Preparing to unpack .../84-linux-perf_6.19.0-3.3_amd64.deb ...
 94s Unpacking linux-perf (6.19.0-3.3) over (6.18.0-9.9) ...
 94s Preparing to unpack .../85-linux-tools-common_6.19.0-3.3_all.deb ...
 94s Unpacking linux-tools-common (6.19.0-3.3) over (6.18.0-9.9) ...
 94s Selecting previously unselected package linux-tools-6.19.0-3.
 94s Preparing to unpack .../86-linux-tools-6.19.0-3_6.19.0-3.3_amd64.deb ...
 94s Unpacking linux-tools-6.19.0-3 (6.19.0-3.3) ...
 94s Selecting previously unselected package linux-tools-6.19.0-3-generic.
 94s Preparing to unpack .../87-linux-tools-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
 94s Unpacking linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
 94s Preparing to unpack .../88-patch_2.8-2build1_amd64.deb ...
 94s Unpacking patch (2.8-2build1) over (2.8-2) ...
 94s Preparing to unpack .../89-pollinate_4.33-4ubuntu5_all.deb ...
 94s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ...
 94s Preparing to unpack .../90-python3-referencing_0.36.2-1ubuntu2_all.deb ...
 94s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ...
 94s Preparing to unpack .../91-ubuntu-kernel-accessories_1.564_amd64.deb ...
 94s Unpacking ubuntu-kernel-accessories (1.564) over (1.563) ...
 94s Setting up libip4tc2:amd64 (1.8.11-2ubuntu3) ...
 94s Setting up 3cpio (0.14.0-1ubuntu1) ...
 94s Setting up libxau6:amd64 (1:1.0.11-1build2) ...
 94s Setting up libnpth0t64:amd64 (1.8-3build1) ...
 94s Setting up libkeyutils1:amd64 (1.6.3-6ubuntu3) ...
 94s Setting up ubuntu-kernel-accessories (1.564) ...
 94s Setting up libgpm2:amd64 (1.20.7-12build1) ...
 94s Setting up libgdbm6t64:amd64 (1.26-1build1) ...
 94s Setting up linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
 96s Setting up libgdbm-compat4t64:amd64 (1.26-1build1) ...
 96s Setting up bpftool (7.7.0+6.19.0-3.3) ...
 96s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ...
 96s Setting up liblsof0 (4.99.4+dfsg-2build2) ...
 96s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ...
 96s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ...
 96s Setting up libsensors-config (1:3.6.2-2build1) ...
 96s Setting up less (668-1build1) ...
 96s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ...
 96s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
 96s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
 96s amd64-microcode: microcode will be updated at next boot
 96s Setting up man-db (2.13.1-1build1) ...
 96s Updating database of manual pages ...
 97s man-db.service is a disabled or a static unit not running, not starting it.
 97s Setting up libjansson4:amd64 (2.14-2build4) ...
 97s Setting up libglib2.0-data (2.87.2-2) ...
 97s Setting up pollinate (4.33-4ubuntu5) ...
108s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
108s Setting up libwrap0:amd64 (7.6.q-36build2) ...
108s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
109s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
109s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
109s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
109s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
109s Setting up patch (2.8-2build1) ...
109s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
109s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
109s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
109s Setting up lsof (4.99.4+dfsg-2build2) ...
109s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
109s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
109s Setting up dracut-install (109-11ubuntu1) ...
109s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
109s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
109s Setting up pnp.ids (0.394-1build1) ...
109s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
109s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
109s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
109s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
109s Setting up mawk (1.3.4.20260129-1) ...
109s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
109s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
109s Setting up linux-image-virtual (6.19.0-3.3) ...
109s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
109s Setting up libbsd0:amd64 (0.12.2-2build2) ...
109s Setting up libdrm-common (2.4.131-1) ...
109s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
109s Setting up dbus-bin (1.16.2-2ubuntu3) ...
109s Setting up libonig5:amd64 (6.9.10-1build1) ...
109s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
109s Setting up ethtool (1:6.15-3build1) ...
109s Setting up python3-referencing (0.36.2-1ubuntu2) ...
109s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
109s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
109s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
109s Setting up tcpdump (4.99.5-2ubuntu3) ...
109s Setting up linux-image-generic (6.19.0-3.3) ...
109s Setting up wget (1.25.0-2ubuntu4) ...
109s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
109s Setting up iptables (1.8.11-2ubuntu3) ...
109s Setting up iproute2 (6.18.0-1ubuntu1) ...
109s Setting up linux-headers-generic (6.19.0-3.3) ...
109s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
109s Setting up hwdata (0.394-1build1) ...
109s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
109s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
110s No schema files found: doing nothing.
110s Setting up dbus (1.16.2-2ubuntu3) ...
110s A reboot is required to replace the running dbus-daemon.
110s Please reboot the system when convenient.
110s Setting up shared-mime-info (2.4-5build3) ...
110s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
110s Setting up pciutils (1:3.14.0-1build2) ...
110s Setting up python3-markdown-it (3.0.0-3build1) ...
111s Setting up libdrm2:amd64 (2.4.131-1) ...
111s Setting up libpython3.14:amd64 (3.14.2-1) ...
111s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
111s Setting up linux-tools-common (6.19.0-3.3) ...
111s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
111s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
111s Setting up apt (3.1.15) ...
111s Setting up linux-headers-virtual (6.19.0-3.3) ...
111s Setting up linux-generic (6.19.0-3.3) ...
111s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
111s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
111s Setting up ubuntu-standard (1.564) ...
111s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
111s Setting up linux-virtual (6.19.0-3.3) ...
111s Setting up linux-perf (6.19.0-3.3) ...
111s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
111s Processing triggers for debianutils (5.23.2build1) ...
111s Processing triggers for install-info (7.2-5) ...
111s Processing triggers for initramfs-tools (0.150ubuntu7) ...
111s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
116s Processing triggers for libc-bin (2.42-2ubuntu4) ...
116s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
116s /etc/kernel/postinst.d/initramfs-tools:
116s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
119s /etc/kernel/postinst.d/zz-update-grub:
119s Sourcing file `/etc/default/grub'
119s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
119s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
119s Generating grub configuration file ...
119s Found linux image: /boot/vmlinuz-6.19.0-3-generic
119s Found initrd image: /boot/initrd.img-6.19.0-3-generic
120s Found linux image: /boot/vmlinuz-6.18.0-9-generic
120s Found initrd image: /boot/initrd.img-6.18.0-9-generic
120s Warning: os-prober will not be executed to detect other bootable partitions.
120s Systems on them will not be added to the GRUB boot configuration.
120s Check GRUB_DISABLE_OS_PROBER documentation entry.
120s Adding boot menu entry for UEFI Firmware Settings ...
120s done
120s autopkgtest [04:21:04]: upgrading testbed (apt dist-upgrade and autopurge)
120s Reading package lists...
121s Building dependency tree...
121s Reading state information...
121s Calculating upgrade...
121s The following package was automatically installed and is no longer required:
121s   libpython3.13
121s Use 'sudo apt autoremove' to remove it.
121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
121s Reading package lists...
121s Building dependency tree...
121s Reading state information...
121s Solving dependencies...
121s The following packages will be REMOVED:
121s   libpython3.13*
122s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
122s After this operation, 7599 kB disk space will be freed.
122s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
122s Removing libpython3.13:amd64 (3.13.11-1) ...
122s Processing triggers for libc-bin (2.42-2ubuntu4) ...
122s autopkgtest [04:21:06]: rebooting testbed after setup commands that affected boot
150s autopkgtest [04:21:34]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
152s autopkgtest [04:21:36]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-scater
154s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-scater 1.34.1+ds-1 (dsc) [2503 B]
154s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-scater 1.34.1+ds-1 (tar) [241 kB]
154s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-scater 1.34.1+ds-1 (diff) [3856 B]
154s gpgv: Signature made Mon Mar 10 01:40:21 2025 UTC
154s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
154s gpgv:                issuer "plessy@debian.org"
154s gpgv: Can't check signature: No public key
154s dpkg-source: warning: cannot verify inline signature for ./r-bioc-scater_1.34.1+ds-1.dsc: no acceptable signature found
154s autopkgtest [04:21:38]: testing package r-bioc-scater version 1.34.1+ds-1
154s autopkgtest [04:21:38]: build not needed
156s autopkgtest [04:21:40]: test pkg-r-autopkgtest: preparing testbed
156s Reading package lists...
156s Building dependency tree...
156s Reading state information...
156s Solving dependencies...
156s The following NEW packages will be installed:
156s   build-essential comerr-dev cpp cpp-15 cpp-15-x86-64-linux-gnu
156s   cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config
156s   fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome
156s   fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-15
156s   g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15
156s   gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15
156s   gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu hdf5-helpers
156s   icu-devtools javascript-common krb5-multidev libaec-dev libaec0 libasan8
156s   libbibtex-parser-perl libblas-dev libblas3 libblosc1 libboost-dev
156s   libboost1.90-dev libbrotli-dev libbz2-dev libc-dev-bin libc6-dev libcairo2
156s   libcc1-0 libcrypt-dev libcurl4-openssl-dev libdatrie1 libdeflate-dev
156s   libdeflate0 libevent-2.1-7t64 libfontconfig1 libgcc-15-dev
156s   libgfortran-15-dev libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64
156s   libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgraphite2-3 libgssrpc4t64
156s   libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310
156s   libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhnswlib-dev
156s   libhwasan0 libice6 libicu-dev libidn2-dev libio-string-perl libisl23 libitm1
156s   libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev
156s   libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js
156s   libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js
156s   libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js
156s   libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js
156s   libjs-twitter-bootstrap-datepicker libkadm5clnt-mit12 libkadm5srv-mit12
156s   libkdb5-10t64 libkpathsea6 libkrb5-dev liblapack-dev liblapack3
156s   liblatex-tounicode-perl libldap-dev liblerc4 liblsan0 liblua5.4-0
156s   liblzma-dev libmpc3 libmpfi0 libncurses-dev libnghttp2-dev libp11-kit-dev
156s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
156s   libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
156s   libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl-dev libptexenc1
156s   libquadmath0 libreadline-dev librtmp-dev libsharpyuv0 libsm6 libsnappy1v5
156s   libssh2-1-dev libssl-dev libstdc++-15-dev libsynctex2 libsz2 libtasn1-6-dev
156s   libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6
156s   libtirpc-dev libtk8.6 libtsan2 libubsan1 libunbound8 libwebp7 libxaw7
156s   libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1
156s   libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 linux-libc-dev nettle-dev
156s   node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data
156s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev
156s   r-bioc-alabaster.base r-bioc-alabaster.matrix r-bioc-alabaster.ranges
156s   r-bioc-alabaster.sce r-bioc-alabaster.schemas r-bioc-alabaster.se
156s   r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-annotationhub
156s   r-bioc-assorthead r-bioc-basilisk r-bioc-basilisk.utils r-bioc-beachmat
156s   r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio
156s   r-bioc-biocneighbors r-bioc-biocparallel r-bioc-biocsingular
156s   r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings
156s   r-bioc-delayedarray r-bioc-delayedmatrixstats r-bioc-densvis
156s   r-bioc-dir.expiry r-bioc-ensembldb r-bioc-experimenthub r-bioc-genomeinfodb
156s   r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures
156s   r-bioc-genomicranges r-bioc-gypsum r-bioc-hdf5array r-bioc-iranges
156s   r-bioc-keggrest r-bioc-matrixgenerics r-bioc-protgenerics r-bioc-rhdf5
156s   r-bioc-rhdf5filters r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools
156s   r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-scaledmatrix
156s   r-bioc-scater r-bioc-scrnaseq r-bioc-scuttle r-bioc-singlecellexperiment
156s   r-bioc-sparsearray r-bioc-sparsematrixstats r-bioc-summarizedexperiment
156s   r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass
156s   r-cran-assertthat r-cran-base64enc r-cran-beeswarm r-cran-bh
156s   r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob
156s   r-cran-bookdown r-cran-brio r-cran-bslib r-cran-cachem r-cran-cairo
156s   r-cran-callr r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cowplot
156s   r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr
156s   r-cran-deoptimr r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr
156s   r-cran-dqrng r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap
156s   r-cran-filelock r-cran-fnn r-cran-fontawesome r-cran-formatr r-cran-fs
156s   r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggbeeswarm
156s   r-cran-ggplot2 r-cran-ggrastr r-cran-ggrepel r-cran-glue r-cran-gridextra
156s   r-cran-gtable r-cran-here r-cran-highr r-cran-hms r-cran-htmltools
156s   r-cran-httpuv r-cran-httr r-cran-httr2 r-cran-irlba r-cran-isoband
156s   r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling
156s   r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle
156s   r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats
156s   r-cran-memoise r-cran-mime r-cran-openssl r-cran-pheatmap r-cran-pillar
156s   r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload
156s   r-cran-plogr r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx
156s   r-cran-progress r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-ragg
156s   r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy
156s   r-cran-rcppeigen r-cran-rcppml r-cran-rcppprogress r-cran-rcpptoml
156s   r-cran-rcurl r-cran-restfulr r-cran-reticulate r-cran-rjson r-cran-rlang
156s   r-cran-rmarkdown r-cran-robustbase r-cran-rprojroot r-cran-rspectra
156s   r-cran-rsqlite r-cran-rsvd r-cran-rtsne r-cran-s7 r-cran-sass r-cran-scales
156s   r-cran-scattermore r-cran-shiny r-cran-sitmo r-cran-snow r-cran-sourcetools
156s   r-cran-stringi r-cran-stringr r-cran-sys r-cran-systemfonts r-cran-testthat
156s   r-cran-textshaping r-cran-tibble r-cran-tidyr r-cran-tidyselect
156s   r-cran-tinytex r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-vipor
156s   r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun
156s   r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils
156s   tex-common texlive-base texlive-bibtex-extra texlive-binaries
156s   texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev
156s 0 upgraded, 401 newly installed, 0 to remove and 0 not upgraded.
156s Need to get 516 MB of archives.
156s After this operation, 1556 MB of additional disk space will be used.
156s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
156s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
157s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
157s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
157s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
157s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
157s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
157s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
158s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
158s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
158s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
158s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
158s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
158s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
158s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
158s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
158s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
158s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
158s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
158s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
158s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
159s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
159s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
159s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
159s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
159s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
159s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
160s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
160s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
160s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
160s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
160s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
160s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
160s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
160s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
160s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
160s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
160s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
160s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
160s Get:40 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-lmodern all 2.005-1build1 [4788 kB]
160s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
160s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
160s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
160s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
161s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
161s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
161s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
161s Get:48 http://ftpmaster.internal/ubuntu resolute/universe amd64 hdf5-helpers amd64 1.14.6+repack-2 [17.3 kB]
161s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
161s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
161s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 comerr-dev amd64 2.1-1.47.2-3ubuntu2 [45.0 kB]
161s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libgssrpc4t64 amd64 1.22.1-2 [57.9 kB]
161s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5clnt-mit12 amd64 1.22.1-2 [40.2 kB]
161s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libkdb5-10t64 amd64 1.22.1-2 [41.6 kB]
161s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5srv-mit12 amd64 1.22.1-2 [55.0 kB]
161s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 krb5-multidev amd64 1.22.1-2 [126 kB]
161s Get:57 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB]
161s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libio-string-perl all 1.08-4 [11.1 kB]
161s Get:59 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblatex-tounicode-perl all 1.93-1 [29.2 kB]
161s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 libbibtex-parser-perl all 1.93+dfsg-1 [17.4 kB]
161s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
161s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
161s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.8 kB]
161s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc1 amd64 1.21.5+ds-2 [35.8 kB]
161s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB]
163s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B]
163s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli-dev amd64 1.1.0-2build6 [355 kB]
163s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
163s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
163s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
163s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
163s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
163s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
163s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-dev amd64 2.3.8-4build1 [121 kB]
163s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libkrb5-dev amd64 1.22.1-2 [11.9 kB]
163s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libldap-dev amd64 2.6.10+dfsg-1ubuntu5 [315 kB]
163s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
163s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
163s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
163s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libnghttp2-dev amd64 1.64.0-1.1ubuntu1 [120 kB]
163s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libpsl-dev amd64 0.21.2-1.1build2 [78.7 kB]
163s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5ubuntu1 [9956 B]
163s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5ubuntu1 [342 kB]
163s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10build2 [145 kB]
163s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 libunbound8 amd64 1.24.2-1ubuntu1 [462 kB]
163s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-dane0t64 amd64 3.8.10-3ubuntu1 [24.5 kB]
163s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-openssl27t64 amd64 3.8.10-3ubuntu1 [24.8 kB]
163s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 libp11-kit-dev amd64 0.25.10-1 [29.3 kB]
163s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6-dev amd64 4.21.0-2 [92.4 kB]
163s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 nettle-dev amd64 3.10.2-1 [1176 kB]
163s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls28-dev amd64 3.8.10-3ubuntu1 [1096 kB]
163s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
163s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-3 [69.2 kB]
163s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libssl-dev amd64 3.5.3-1ubuntu2 [2936 kB]
163s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 libssh2-1-dev amd64 1.11.1-1build1 [288 kB]
163s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
163s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libcurl4-openssl-dev amd64 8.18.0-1ubuntu1 [543 kB]
163s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
163s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
163s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
163s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
163s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
163s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB]
163s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB]
163s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-cpp-310 amd64 1.14.6+repack-2 [125 kB]
163s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-fortran-310 amd64 1.14.6+repack-2 [106 kB]
163s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB]
163s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-fortran-310 amd64 1.14.6+repack-2 [32.1 kB]
163s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-cpp-310 amd64 1.14.6+repack-2 [11.9 kB]
163s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
163s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
163s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
163s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
163s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
163s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec-dev amd64 1.1.5-1 [23.5 kB]
163s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-dev amd64 1.14.6+repack-2 [3386 kB]
164s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhnswlib-dev all 0.8.0-1build4 [24.4 kB]
164s Get:118 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
164s Get:119 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
164s Get:120 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
164s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
164s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
164s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
164s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
164s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
164s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
164s Get:127 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
164s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
164s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
164s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
164s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
164s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
164s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
164s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB]
164s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
164s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkpathsea6 amd64 2025.20250727.75242+ds-5build1 [66.0 kB]
164s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
164s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
165s Get:139 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
165s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
165s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmpfi0 amd64 1.5.4+ds-4build1 [36.6 kB]
165s Get:142 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
165s Get:143 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
165s Get:144 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
165s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
165s Get:146 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
165s Get:147 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
165s Get:148 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
165s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
165s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
165s Get:151 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
165s Get:152 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
165s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
165s Get:154 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
165s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpotrace0 amd64 1.16-2build2 [17.9 kB]
165s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptexenc1 amd64 2025.20250727.75242+ds-5build1 [46.4 kB]
165s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
165s Get:158 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
165s Get:159 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
165s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsynctex2 amd64 2025.20250727.75242+ds-5build1 [62.1 kB]
165s Get:161 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
165s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 libteckit0 amd64 2.5.13+ds-1 [431 kB]
165s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtexlua53-5 amd64 2025.20250727.75242+ds-5build1 [125 kB]
165s Get:164 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
165s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
165s Get:166 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
165s Get:167 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
165s Get:168 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
165s Get:169 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
165s Get:170 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
165s Get:171 http://ftpmaster.internal/ubuntu resolute/main amd64 libxmu6 amd64 2:1.1.3-4 [48.9 kB]
165s Get:172 http://ftpmaster.internal/ubuntu resolute/main amd64 libxpm4 amd64 1:3.5.17-1build3 [37.3 kB]
165s Get:173 http://ftpmaster.internal/ubuntu resolute/main amd64 libxaw7 amd64 2:1.0.16-1build1 [190 kB]
165s Get:174 http://ftpmaster.internal/ubuntu resolute/main amd64 libxi6 amd64 2:1.8.2-2 [33.1 kB]
165s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.2 [30.1 kB]
165s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
165s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
165s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
165s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
165s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
166s Get:181 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
166s Get:182 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
166s Get:183 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
166s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
168s Get:185 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
168s Get:186 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
168s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
168s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
168s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB]
168s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-alabaster.schemas all 1.6.0+ds-2 [24.9 kB]
168s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB]
168s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5lib amd64 1.28.0+dfsg-3 [97.2 kB]
168s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5filters amd64 1.18.1+dfsg-1 [137 kB]
168s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5 amd64 2.50.2+dfsg-1build1 [822 kB]
168s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
168s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
168s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
168s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
168s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-alabaster.base amd64 1.6.1+ds-2build1 [800 kB]
168s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB]
168s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
169s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
169s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB]
169s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB]
169s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
169s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
169s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB]
169s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
169s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB]
170s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB]
170s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB]
170s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-hdf5array amd64 1.34.0-2build1 [8792 kB]
170s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-alabaster.matrix amd64 1.6.1+ds-2 [443 kB]
170s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
170s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
170s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB]
170s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB]
170s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB]
170s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
170s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
170s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
170s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
171s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
171s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB]
171s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-alabaster.ranges all 1.6.0+ds-2 [100 kB]
171s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB]
171s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB]
172s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB]
172s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-alabaster.se all 1.6.0+ds-2 [87.0 kB]
172s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-alabaster.sce all 1.6.0+ds-2 [83.6 kB]
172s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB]
172s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB]
172s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit64 amd64 4.6.0-1-4 [491 kB]
172s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
172s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
172s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
172s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
172s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
172s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-blob all 1.3.0-1 [54.1 kB]
172s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
172s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
172s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
172s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
172s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plogr all 0.2.0-3build2 [15.8 kB]
172s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
172s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rsqlite amd64 2.3.9-1 [1467 kB]
172s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB]
172s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB]
173s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB]
173s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB]
173s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
173s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB]
173s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
173s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
173s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
173s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
173s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
173s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
173s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
173s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
173s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
173s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
173s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
173s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
173s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
173s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbplyr all 2.5.1+dfsg-1 [1237 kB]
173s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-filelock amd64 1.0.3-1 [29.6 kB]
173s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB]
173s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
173s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocversion all 3.20.0-2 [11.1 kB]
173s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
173s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
173s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB]
173s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB]
173s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpptoml amd64 0.2.3+dfsg-1 [118 kB]
173s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB]
173s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-here all 1.0.2-1 [51.5 kB]
173s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reticulate amd64 1.41.0.1+dfsg-1 [1306 kB]
173s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-dir.expiry all 1.14.0+ds-2 [32.5 kB]
174s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-basilisk.utils all 1.18.0+ds-2 [78.0 kB]
174s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-basilisk amd64 1.18.0+ds-2 [98.5 kB]
174s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-beachmat amd64 2.22.0+ds-3 [958 kB]
174s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB]
174s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocneighbors amd64 2.0.1+ds-2 [446 kB]
174s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB]
174s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB]
174s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB]
174s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB]
174s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB]
174s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
174s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B]
174s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB]
174s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-scaledmatrix all 1.14.0+dfsg-2 [324 kB]
174s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-irlba amd64 2.3.5.1-4 [295 kB]
174s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rsvd all 1.0.5-1build1 [3595 kB]
174s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocsingular amd64 1.22.0+ds-2 [357 kB]
174s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
174s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
174s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
174s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
174s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
174s Get:302 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
174s Get:303 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
175s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
175s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
175s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
175s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
175s Get:308 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
175s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
175s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
175s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
175s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
175s Get:313 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
175s Get:314 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
175s Get:315 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
175s Get:316 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
175s Get:317 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
175s Get:318 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
175s Get:319 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
175s Get:320 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
175s Get:321 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB]
175s Get:322 http://ftpmaster.internal/ubuntu resolute/universe amd64 tex-common all 6.20 [30.0 kB]
175s Get:323 http://ftpmaster.internal/ubuntu resolute/main amd64 t1utils amd64 1.41-4build4 [62.7 kB]
175s Get:324 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-binaries amd64 2025.20250727.75242+ds-5build1 [8747 kB]
175s Get:325 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-base all 2025.20260124-1 [22.8 MB]
176s Get:326 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-latex-base all 2025.20260124-1 [1321 kB]
176s Get:327 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-bibtex-extra all 2025.20260124-1 [80.6 MB]
178s Get:328 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB]
178s Get:329 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hms all 1.1.4-1 [102 kB]
178s Get:330 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB]
178s Get:331 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB]
178s Get:332 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr2 all 1.1.1-2 [752 kB]
178s Get:333 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml2 amd64 1.4.1-1 [329 kB]
178s Get:334 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB]
178s Get:335 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsematrixstats amd64 1.18.0+dfsg-2 [877 kB]
178s Get:336 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB]
178s Get:337 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-assertthat all 0.2.1-3 [57.6 kB]
178s Get:338 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rtsne amd64 0.17-1 [109 kB]
178s Get:339 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-densvis amd64 1.16.0+dfsg-2 [103 kB]
178s Get:340 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml amd64 3.99-0.20-1 [1751 kB]
178s Get:341 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
179s Get:342 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB]
179s Get:343 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB]
179s Get:344 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB]
180s Get:345 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB]
180s Get:346 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB]
180s Get:347 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB]
180s Get:348 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rtracklayer amd64 1.66.0-3 [5225 kB]
180s Get:349 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB]
180s Get:350 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-protgenerics all 1.38.0-2 [239 kB]
180s Get:351 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB]
180s Get:352 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-experimenthub all 2.14.0+ds-2 [84.6 kB]
180s Get:353 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-gypsum all 1.2.0+ds-2 [212 kB]
180s Get:354 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-scuttle amd64 1.16.0+dfsg-3 [459 kB]
180s Get:355 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
180s Get:356 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
180s Get:357 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB]
180s Get:358 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
180s Get:359 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
180s Get:360 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
180s Get:361 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
180s Get:362 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
180s Get:363 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB]
181s Get:364 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-beeswarm amd64 0.4.0-1build1 [82.8 kB]
181s Get:365 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vipor all 0.4.7-1 [4624 kB]
181s Get:366 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggbeeswarm all 0.7.3-1 [1743 kB]
181s Get:367 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB]
181s Get:368 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB]
181s Get:369 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
181s Get:370 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppml amd64 0.3.7-2 [180 kB]
181s Get:371 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fnn amd64 1.1.4.1-1 [126 kB]
181s Get:372 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppannoy amd64 0.0.22-1 [235 kB]
181s Get:373 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rspectra amd64 0.16-2-1 [448 kB]
181s Get:374 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sitmo amd64 2.0.2-1build1 [133 kB]
181s Get:375 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [161 kB]
181s Get:376 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppprogress all 0.4.2-2build2 [23.0 kB]
181s Get:377 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-uwot amd64 0.2.3-1 [1080 kB]
181s Get:378 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pheatmap all 1.0.13-1 [79.6 kB]
181s Get:379 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggrepel amd64 0.9.6-1 [270 kB]
181s Get:380 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cairo amd64 1.6-2-1 [88.8 kB]
181s Get:381 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-systemfonts amd64 1.2.1-1 [347 kB]
181s Get:382 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-textshaping amd64 0.3.7-2 [95.5 kB]
181s Get:383 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ragg amd64 1.3.3-1 [510 kB]
181s Get:384 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggrastr all 1.0.2-1 [2566 kB]
181s Get:385 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-scater all 1.34.1+ds-1 [472 kB]
181s Get:386 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-scrnaseq all 2.20.0+ds-2 [309 kB]
181s Get:387 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB]
181s Get:388 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
181s Get:389 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
181s Get:390 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
181s Get:391 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
181s Get:392 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deoptimr all 1.1-4-1 [76.7 kB]
181s Get:393 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB]
181s Get:394 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB]
181s Get:395 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB]
181s Get:396 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB]
181s Get:397 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB]
181s Get:398 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-robustbase amd64 0.99-7-1 [3074 kB]
182s Get:399 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scattermore amd64 1.2-1 [331 kB]
182s Get:400 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB]
182s Get:401 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB]
182s Preconfiguring packages ...
182s Fetched 516 MB in 25s (20.4 MB/s)
182s Selecting previously unselected package libc-dev-bin.
182s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125269 files and directories currently installed.)
182s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
182s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
182s Selecting previously unselected package linux-libc-dev:amd64.
182s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ...
182s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
182s Selecting previously unselected package libcrypt-dev:amd64.
182s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
182s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
182s Selecting previously unselected package rpcsvc-proto.
182s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
182s Unpacking rpcsvc-proto (1.4.3-1build1) ...
182s Selecting previously unselected package libc6-dev:amd64.
182s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ...
182s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
182s Selecting previously unselected package libisl23:amd64.
182s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ...
182s Unpacking libisl23:amd64 (0.27-1build1) ...
182s Selecting previously unselected package libmpc3:amd64.
182s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ...
182s Unpacking libmpc3:amd64 (1.3.1-2) ...
182s Selecting previously unselected package cpp-15-x86-64-linux-gnu.
182s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
182s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package cpp-15.
183s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ...
183s Unpacking cpp-15 (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package cpp-x86-64-linux-gnu.
183s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
183s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
183s Selecting previously unselected package cpp.
183s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ...
183s Unpacking cpp (4:15.2.0-4ubuntu1) ...
183s Selecting previously unselected package libcc1-0:amd64.
183s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libgomp1:amd64.
183s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libitm1:amd64.
183s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libasan8:amd64.
183s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package liblsan0:amd64.
183s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libtsan2:amd64.
183s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libubsan1:amd64.
183s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libhwasan0:amd64.
183s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libquadmath0:amd64.
183s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ...
183s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ...
183s Selecting previously unselected package libgcc-15-dev:amd64.
183s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ...
183s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package gcc-15-x86-64-linux-gnu.
183s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
183s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package gcc-15.
183s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ...
183s Unpacking gcc-15 (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package gcc-x86-64-linux-gnu.
183s Preparing to unpack .../023-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
183s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
183s Selecting previously unselected package gcc.
183s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ...
183s Unpacking gcc (4:15.2.0-4ubuntu1) ...
183s Selecting previously unselected package libstdc++-15-dev:amd64.
183s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ...
183s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package g++-15-x86-64-linux-gnu.
183s Preparing to unpack .../026-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
183s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package g++-15.
183s Preparing to unpack .../027-g++-15_15.2.0-12ubuntu1_amd64.deb ...
183s Unpacking g++-15 (15.2.0-12ubuntu1) ...
183s Selecting previously unselected package g++-x86-64-linux-gnu.
183s Preparing to unpack .../028-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
183s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
183s Selecting previously unselected package g++.
183s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_amd64.deb ...
183s Unpacking g++ (4:15.2.0-4ubuntu1) ...
183s Selecting previously unselected package build-essential.
183s Preparing to unpack .../030-build-essential_12.12ubuntu2_amd64.deb ...
183s Unpacking build-essential (12.12ubuntu2) ...
184s Selecting previously unselected package dctrl-tools.
184s Preparing to unpack .../031-dctrl-tools_2.24-3build4_amd64.deb ...
184s Unpacking dctrl-tools (2.24-3build4) ...
184s Selecting previously unselected package fonts-dejavu-mono.
184s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8build1_all.deb ...
184s Unpacking fonts-dejavu-mono (2.37-8build1) ...
184s Selecting previously unselected package fonts-dejavu-core.
184s Preparing to unpack .../033-fonts-dejavu-core_2.37-8build1_all.deb ...
184s Unpacking fonts-dejavu-core (2.37-8build1) ...
184s Selecting previously unselected package fontconfig-config.
184s Preparing to unpack .../034-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
184s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
184s Selecting previously unselected package libfontconfig1:amd64.
184s Preparing to unpack .../035-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
184s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
184s Selecting previously unselected package fontconfig.
184s Preparing to unpack .../036-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
184s Unpacking fontconfig (2.17.1-3ubuntu1) ...
184s Selecting previously unselected package fonts-font-awesome.
184s Preparing to unpack .../037-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ...
184s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
184s Selecting previously unselected package fonts-glyphicons-halflings.
184s Preparing to unpack .../038-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
184s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
184s Selecting previously unselected package fonts-lmodern.
184s Preparing to unpack .../039-fonts-lmodern_2.005-1build1_all.deb ...
184s Unpacking fonts-lmodern (2.005-1build1) ...
184s Selecting previously unselected package fonts-mathjax.
184s Preparing to unpack .../040-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
184s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
184s Selecting previously unselected package libgfortran5:amd64.
184s Preparing to unpack .../041-libgfortran5_16-20260208-1ubuntu1_amd64.deb ...
184s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ...
184s Selecting previously unselected package libgfortran-15-dev:amd64.
184s Preparing to unpack .../042-libgfortran-15-dev_15.2.0-12ubuntu1_amd64.deb ...
184s Unpacking libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
184s Selecting previously unselected package gfortran-15-x86-64-linux-gnu.
184s Preparing to unpack .../043-gfortran-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
184s Unpacking gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
184s Selecting previously unselected package gfortran-15.
184s Preparing to unpack .../044-gfortran-15_15.2.0-12ubuntu1_amd64.deb ...
184s Unpacking gfortran-15 (15.2.0-12ubuntu1) ...
184s Selecting previously unselected package gfortran-x86-64-linux-gnu.
184s Preparing to unpack .../045-gfortran-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
184s Unpacking gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
184s Selecting previously unselected package gfortran.
184s Preparing to unpack .../046-gfortran_4%3a15.2.0-4ubuntu1_amd64.deb ...
184s Unpacking gfortran (4:15.2.0-4ubuntu1) ...
184s Selecting previously unselected package hdf5-helpers.
184s Preparing to unpack .../047-hdf5-helpers_1.14.6+repack-2_amd64.deb ...
184s Unpacking hdf5-helpers (1.14.6+repack-2) ...
184s Selecting previously unselected package icu-devtools.
184s Preparing to unpack .../048-icu-devtools_78.2-1ubuntu1_amd64.deb ...
184s Unpacking icu-devtools (78.2-1ubuntu1) ...
184s Selecting previously unselected package javascript-common.
184s Preparing to unpack .../049-javascript-common_12+nmu1build1_all.deb ...
184s Unpacking javascript-common (12+nmu1build1) ...
184s Selecting previously unselected package comerr-dev:amd64.
184s Preparing to unpack .../050-comerr-dev_2.1-1.47.2-3ubuntu2_amd64.deb ...
184s Unpacking comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ...
184s Selecting previously unselected package libgssrpc4t64:amd64.
184s Preparing to unpack .../051-libgssrpc4t64_1.22.1-2_amd64.deb ...
184s Unpacking libgssrpc4t64:amd64 (1.22.1-2) ...
184s Selecting previously unselected package libkadm5clnt-mit12:amd64.
184s Preparing to unpack .../052-libkadm5clnt-mit12_1.22.1-2_amd64.deb ...
184s Unpacking libkadm5clnt-mit12:amd64 (1.22.1-2) ...
184s Selecting previously unselected package libkdb5-10t64:amd64.
184s Preparing to unpack .../053-libkdb5-10t64_1.22.1-2_amd64.deb ...
184s Unpacking libkdb5-10t64:amd64 (1.22.1-2) ...
184s Selecting previously unselected package libkadm5srv-mit12:amd64.
184s Preparing to unpack .../054-libkadm5srv-mit12_1.22.1-2_amd64.deb ...
184s Unpacking libkadm5srv-mit12:amd64 (1.22.1-2) ...
184s Selecting previously unselected package krb5-multidev:amd64.
184s Preparing to unpack .../055-krb5-multidev_1.22.1-2_amd64.deb ...
184s Unpacking krb5-multidev:amd64 (1.22.1-2) ...
184s Selecting previously unselected package libaec0:amd64.
184s Preparing to unpack .../056-libaec0_1.1.5-1_amd64.deb ...
184s Unpacking libaec0:amd64 (1.1.5-1) ...
184s Selecting previously unselected package libio-string-perl.
184s Preparing to unpack .../057-libio-string-perl_1.08-4_all.deb ...
184s Unpacking libio-string-perl (1.08-4) ...
184s Selecting previously unselected package liblatex-tounicode-perl.
184s Preparing to unpack .../058-liblatex-tounicode-perl_1.93-1_all.deb ...
184s Unpacking liblatex-tounicode-perl (1.93-1) ...
184s Selecting previously unselected package libbibtex-parser-perl.
184s Preparing to unpack .../059-libbibtex-parser-perl_1.93+dfsg-1_all.deb ...
184s Unpacking libbibtex-parser-perl (1.93+dfsg-1) ...
184s Selecting previously unselected package libblas3:amd64.
184s Preparing to unpack .../060-libblas3_3.12.1-7ubuntu1_amd64.deb ...
184s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ...
184s Selecting previously unselected package libblas-dev:amd64.
184s Preparing to unpack .../061-libblas-dev_3.12.1-7ubuntu1_amd64.deb ...
184s Unpacking libblas-dev:amd64 (3.12.1-7ubuntu1) ...
184s Selecting previously unselected package libsnappy1v5:amd64.
184s Preparing to unpack .../062-libsnappy1v5_1.2.2-2_amd64.deb ...
184s Unpacking libsnappy1v5:amd64 (1.2.2-2) ...
184s Selecting previously unselected package libblosc1:amd64.
184s Preparing to unpack .../063-libblosc1_1.21.5+ds-2_amd64.deb ...
184s Unpacking libblosc1:amd64 (1.21.5+ds-2) ...
184s Selecting previously unselected package libboost1.90-dev:amd64.
184s Preparing to unpack .../064-libboost1.90-dev_1.90.0-2ubuntu1_amd64.deb ...
184s Unpacking libboost1.90-dev:amd64 (1.90.0-2ubuntu1) ...
185s Selecting previously unselected package libboost-dev:amd64.
185s Preparing to unpack .../065-libboost-dev_1.90.0.0ubuntu3_amd64.deb ...
185s Unpacking libboost-dev:amd64 (1.90.0.0ubuntu3) ...
185s Selecting previously unselected package libbrotli-dev:amd64.
185s Preparing to unpack .../066-libbrotli-dev_1.1.0-2build6_amd64.deb ...
185s Unpacking libbrotli-dev:amd64 (1.1.0-2build6) ...
185s Selecting previously unselected package libbz2-dev:amd64.
185s Preparing to unpack .../067-libbz2-dev_1.0.8-6build2_amd64.deb ...
185s Unpacking libbz2-dev:amd64 (1.0.8-6build2) ...
185s Selecting previously unselected package libpixman-1-0:amd64.
185s Preparing to unpack .../068-libpixman-1-0_0.46.4-1_amd64.deb ...
185s Unpacking libpixman-1-0:amd64 (0.46.4-1) ...
185s Selecting previously unselected package libxcb-render0:amd64.
185s Preparing to unpack .../069-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
185s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
185s Selecting previously unselected package libxcb-shm0:amd64.
185s Preparing to unpack .../070-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
185s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
185s Selecting previously unselected package libxrender1:amd64.
185s Preparing to unpack .../071-libxrender1_1%3a0.9.12-1_amd64.deb ...
185s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
185s Selecting previously unselected package libcairo2:amd64.
185s Preparing to unpack .../072-libcairo2_1.18.4-3_amd64.deb ...
185s Unpacking libcairo2:amd64 (1.18.4-3) ...
185s Selecting previously unselected package libidn2-dev:amd64.
185s Preparing to unpack .../073-libidn2-dev_2.3.8-4build1_amd64.deb ...
185s Unpacking libidn2-dev:amd64 (2.3.8-4build1) ...
185s Selecting previously unselected package libkrb5-dev:amd64.
185s Preparing to unpack .../074-libkrb5-dev_1.22.1-2_amd64.deb ...
185s Unpacking libkrb5-dev:amd64 (1.22.1-2) ...
185s Selecting previously unselected package libldap-dev:amd64.
185s Preparing to unpack .../075-libldap-dev_2.6.10+dfsg-1ubuntu5_amd64.deb ...
185s Unpacking libldap-dev:amd64 (2.6.10+dfsg-1ubuntu5) ...
185s Selecting previously unselected package libpkgconf3:amd64.
185s Preparing to unpack .../076-libpkgconf3_1.8.1-4build1_amd64.deb ...
185s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ...
185s Selecting previously unselected package pkgconf-bin.
185s Preparing to unpack .../077-pkgconf-bin_1.8.1-4build1_amd64.deb ...
185s Unpacking pkgconf-bin (1.8.1-4build1) ...
185s Selecting previously unselected package pkgconf:amd64.
185s Preparing to unpack .../078-pkgconf_1.8.1-4build1_amd64.deb ...
185s Unpacking pkgconf:amd64 (1.8.1-4build1) ...
185s Selecting previously unselected package libnghttp2-dev:amd64.
185s Preparing to unpack .../079-libnghttp2-dev_1.64.0-1.1ubuntu1_amd64.deb ...
185s Unpacking libnghttp2-dev:amd64 (1.64.0-1.1ubuntu1) ...
185s Selecting previously unselected package libpsl-dev:amd64.
185s Preparing to unpack .../080-libpsl-dev_0.21.2-1.1build2_amd64.deb ...
185s Unpacking libpsl-dev:amd64 (0.21.2-1.1build2) ...
185s Selecting previously unselected package libgmpxx4ldbl:amd64.
185s Preparing to unpack .../081-libgmpxx4ldbl_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ...
185s Unpacking libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5ubuntu1) ...
185s Selecting previously unselected package libgmp-dev:amd64.
185s Preparing to unpack .../082-libgmp-dev_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ...
185s Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-5ubuntu1) ...
186s Selecting previously unselected package libevent-2.1-7t64:amd64.
186s Preparing to unpack .../083-libevent-2.1-7t64_2.1.12-stable-10build2_amd64.deb ...
186s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
186s Selecting previously unselected package libunbound8:amd64.
186s Preparing to unpack .../084-libunbound8_1.24.2-1ubuntu1_amd64.deb ...
186s Unpacking libunbound8:amd64 (1.24.2-1ubuntu1) ...
186s Selecting previously unselected package libgnutls-dane0t64:amd64.
186s Preparing to unpack .../085-libgnutls-dane0t64_3.8.10-3ubuntu1_amd64.deb ...
186s Unpacking libgnutls-dane0t64:amd64 (3.8.10-3ubuntu1) ...
186s Selecting previously unselected package libgnutls-openssl27t64:amd64.
186s Preparing to unpack .../086-libgnutls-openssl27t64_3.8.10-3ubuntu1_amd64.deb ...
186s Unpacking libgnutls-openssl27t64:amd64 (3.8.10-3ubuntu1) ...
186s Selecting previously unselected package libp11-kit-dev:amd64.
186s Preparing to unpack .../087-libp11-kit-dev_0.25.10-1_amd64.deb ...
186s Unpacking libp11-kit-dev:amd64 (0.25.10-1) ...
186s Selecting previously unselected package libtasn1-6-dev:amd64.
186s Preparing to unpack .../088-libtasn1-6-dev_4.21.0-2_amd64.deb ...
186s Unpacking libtasn1-6-dev:amd64 (4.21.0-2) ...
186s Selecting previously unselected package nettle-dev:amd64.
186s Preparing to unpack .../089-nettle-dev_3.10.2-1_amd64.deb ...
186s Unpacking nettle-dev:amd64 (3.10.2-1) ...
186s Selecting previously unselected package libgnutls28-dev:amd64.
186s Preparing to unpack .../090-libgnutls28-dev_3.8.10-3ubuntu1_amd64.deb ...
186s Unpacking libgnutls28-dev:amd64 (3.8.10-3ubuntu1) ...
186s Selecting previously unselected package zlib1g-dev:amd64.
186s Preparing to unpack .../091-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ...
186s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
186s Selecting previously unselected package librtmp-dev:amd64.
186s Preparing to unpack .../092-librtmp-dev_2.4+20151223.gitfa8646d.1-3_amd64.deb ...
186s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-3) ...
186s Selecting previously unselected package libssl-dev:amd64.
186s Preparing to unpack .../093-libssl-dev_3.5.3-1ubuntu2_amd64.deb ...
186s Unpacking libssl-dev:amd64 (3.5.3-1ubuntu2) ...
186s Selecting previously unselected package libssh2-1-dev:amd64.
186s Preparing to unpack .../094-libssh2-1-dev_1.11.1-1build1_amd64.deb ...
186s Unpacking libssh2-1-dev:amd64 (1.11.1-1build1) ...
186s Selecting previously unselected package libzstd-dev:amd64.
186s Preparing to unpack .../095-libzstd-dev_1.5.7+dfsg-3_amd64.deb ...
186s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-3) ...
186s Selecting previously unselected package libcurl4-openssl-dev:amd64.
186s Preparing to unpack .../096-libcurl4-openssl-dev_8.18.0-1ubuntu1_amd64.deb ...
186s Unpacking libcurl4-openssl-dev:amd64 (8.18.0-1ubuntu1) ...
186s Selecting previously unselected package libdatrie1:amd64.
186s Preparing to unpack .../097-libdatrie1_0.2.14-1_amd64.deb ...
186s Unpacking libdatrie1:amd64 (0.2.14-1) ...
186s Selecting previously unselected package libdeflate0:amd64.
186s Preparing to unpack .../098-libdeflate0_1.23-2build1_amd64.deb ...
186s Unpacking libdeflate0:amd64 (1.23-2build1) ...
186s Selecting previously unselected package libdeflate-dev:amd64.
186s Preparing to unpack .../099-libdeflate-dev_1.23-2build1_amd64.deb ...
186s Unpacking libdeflate-dev:amd64 (1.23-2build1) ...
186s Selecting previously unselected package libgraphite2-3:amd64.
186s Preparing to unpack .../100-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ...
186s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
186s Selecting previously unselected package libharfbuzz0b:amd64.
186s Preparing to unpack .../101-libharfbuzz0b_12.3.2-1_amd64.deb ...
186s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ...
186s Selecting previously unselected package libsz2:amd64.
186s Preparing to unpack .../102-libsz2_1.1.5-1_amd64.deb ...
186s Unpacking libsz2:amd64 (1.1.5-1) ...
186s Selecting previously unselected package libhdf5-310:amd64.
186s Preparing to unpack .../103-libhdf5-310_1.14.6+repack-2_amd64.deb ...
186s Unpacking libhdf5-310:amd64 (1.14.6+repack-2) ...
186s Selecting previously unselected package libhdf5-cpp-310:amd64.
186s Preparing to unpack .../104-libhdf5-cpp-310_1.14.6+repack-2_amd64.deb ...
186s Unpacking libhdf5-cpp-310:amd64 (1.14.6+repack-2) ...
186s Selecting previously unselected package libhdf5-fortran-310:amd64.
186s Preparing to unpack .../105-libhdf5-fortran-310_1.14.6+repack-2_amd64.deb ...
186s Unpacking libhdf5-fortran-310:amd64 (1.14.6+repack-2) ...
186s Selecting previously unselected package libhdf5-hl-310:amd64.
186s Preparing to unpack .../106-libhdf5-hl-310_1.14.6+repack-2_amd64.deb ...
186s Unpacking libhdf5-hl-310:amd64 (1.14.6+repack-2) ...
186s Selecting previously unselected package libhdf5-hl-fortran-310:amd64.
186s Preparing to unpack .../107-libhdf5-hl-fortran-310_1.14.6+repack-2_amd64.deb ...
186s Unpacking libhdf5-hl-fortran-310:amd64 (1.14.6+repack-2) ...
186s Selecting previously unselected package libhdf5-hl-cpp-310:amd64.
186s Preparing to unpack .../108-libhdf5-hl-cpp-310_1.14.6+repack-2_amd64.deb ...
186s Unpacking libhdf5-hl-cpp-310:amd64 (1.14.6+repack-2) ...
186s Selecting previously unselected package libjpeg-turbo8:amd64.
186s Preparing to unpack .../109-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ...
186s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
186s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
186s Preparing to unpack .../110-libjpeg-turbo8-dev_2.1.5-4ubuntu3_amd64.deb ...
186s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ...
186s Selecting previously unselected package libjpeg8:amd64.
186s Preparing to unpack .../111-libjpeg8_8c-2ubuntu12_amd64.deb ...
186s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ...
186s Selecting previously unselected package libjpeg8-dev:amd64.
186s Preparing to unpack .../112-libjpeg8-dev_8c-2ubuntu12_amd64.deb ...
186s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu12) ...
186s Selecting previously unselected package libjpeg-dev:amd64.
186s Preparing to unpack .../113-libjpeg-dev_8c-2ubuntu12_amd64.deb ...
186s Unpacking libjpeg-dev:amd64 (8c-2ubuntu12) ...
186s Selecting previously unselected package libaec-dev:amd64.
186s Preparing to unpack .../114-libaec-dev_1.1.5-1_amd64.deb ...
186s Unpacking libaec-dev:amd64 (1.1.5-1) ...
186s Selecting previously unselected package libhdf5-dev.
186s Preparing to unpack .../115-libhdf5-dev_1.14.6+repack-2_amd64.deb ...
186s Unpacking libhdf5-dev (1.14.6+repack-2) ...
186s Selecting previously unselected package libhnswlib-dev.
186s Preparing to unpack .../116-libhnswlib-dev_0.8.0-1build4_all.deb ...
186s Unpacking libhnswlib-dev (0.8.0-1build4) ...
186s Selecting previously unselected package x11-common.
186s Preparing to unpack .../117-x11-common_1%3a7.7+24ubuntu1_all.deb ...
186s Unpacking x11-common (1:7.7+24ubuntu1) ...
186s Selecting previously unselected package libice6:amd64.
186s Preparing to unpack .../118-libice6_2%3a1.1.1-1build1_amd64.deb ...
186s Unpacking libice6:amd64 (2:1.1.1-1build1) ...
186s Selecting previously unselected package libicu-dev:amd64.
186s Preparing to unpack .../119-libicu-dev_78.2-1ubuntu1_amd64.deb ...
186s Unpacking libicu-dev:amd64 (78.2-1ubuntu1) ...
186s Selecting previously unselected package libjs-bootstrap.
186s Preparing to unpack .../120-libjs-bootstrap_3.4.1+dfsg-6_all.deb ...
186s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ...
186s Selecting previously unselected package libjs-popper.js.
186s Preparing to unpack .../121-libjs-popper.js_1.16.1+ds-6build1_all.deb ...
187s Unpacking libjs-popper.js (1.16.1+ds-6build1) ...
187s Selecting previously unselected package libjs-bootstrap4.
187s Preparing to unpack .../122-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ...
187s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ...
187s Selecting previously unselected package libjs-d3.
187s Preparing to unpack .../123-libjs-d3_3.5.17-4build1_all.deb ...
187s Unpacking libjs-d3 (3.5.17-4build1) ...
187s Selecting previously unselected package libjs-es5-shim.
187s Preparing to unpack .../124-libjs-es5-shim_4.6.7-2_all.deb ...
187s Unpacking libjs-es5-shim (4.6.7-2) ...
187s Selecting previously unselected package libjs-highlight.js.
187s Preparing to unpack .../125-libjs-highlight.js_10.7.3+dfsg-2_all.deb ...
187s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ...
187s Selecting previously unselected package libjs-jquery.
187s Preparing to unpack .../126-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ...
187s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
187s Selecting previously unselected package libjs-jquery-datatables.
187s Preparing to unpack .../127-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ...
187s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
187s Selecting previously unselected package libjs-sifter.js.
187s Preparing to unpack .../128-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
187s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
187s Selecting previously unselected package libjs-microplugin.js.
187s Preparing to unpack .../129-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ...
187s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ...
187s Selecting previously unselected package libjs-jquery-selectize.js.
187s Preparing to unpack .../130-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
187s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
187s Selecting previously unselected package libjs-jquery-ui.
187s Preparing to unpack .../131-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ...
187s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ...
187s Selecting previously unselected package libjs-json.
187s Preparing to unpack .../132-libjs-json_0~20221030+~1.0.8-1build1_all.deb ...
187s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ...
187s Selecting previously unselected package libjs-lunr.
187s Preparing to unpack .../133-libjs-lunr_2.3.9~dfsg-2_all.deb ...
187s Unpacking libjs-lunr (2.3.9~dfsg-2) ...
187s Selecting previously unselected package libjs-prettify.
187s Preparing to unpack .../134-libjs-prettify_2015.12.04+dfsg-3_all.deb ...
187s Unpacking libjs-prettify (2015.12.04+dfsg-3) ...
187s Selecting previously unselected package libkpathsea6:amd64.
187s Preparing to unpack .../135-libkpathsea6_2025.20250727.75242+ds-5build1_amd64.deb ...
187s Unpacking libkpathsea6:amd64 (2025.20250727.75242+ds-5build1) ...
187s Selecting previously unselected package liblapack3:amd64.
187s Preparing to unpack .../136-liblapack3_3.12.1-7ubuntu1_amd64.deb ...
187s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ...
187s Selecting previously unselected package liblapack-dev:amd64.
187s Preparing to unpack .../137-liblapack-dev_3.12.1-7ubuntu1_amd64.deb ...
187s Unpacking liblapack-dev:amd64 (3.12.1-7ubuntu1) ...
187s Selecting previously unselected package liblerc4:amd64.
187s Preparing to unpack .../138-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ...
187s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
187s Selecting previously unselected package liblua5.4-0:amd64.
187s Preparing to unpack .../139-liblua5.4-0_5.4.8-1_amd64.deb ...
187s Unpacking liblua5.4-0:amd64 (5.4.8-1) ...
187s Selecting previously unselected package libmpfi0:amd64.
187s Preparing to unpack .../140-libmpfi0_1.5.4+ds-4build1_amd64.deb ...
187s Unpacking libmpfi0:amd64 (1.5.4+ds-4build1) ...
187s Selecting previously unselected package libncurses-dev:amd64.
187s Preparing to unpack .../141-libncurses-dev_6.6+20251231-1_amd64.deb ...
187s Unpacking libncurses-dev:amd64 (6.6+20251231-1) ...
187s Selecting previously unselected package libthai-data.
187s Preparing to unpack .../142-libthai-data_0.1.30-1_all.deb ...
187s Unpacking libthai-data (0.1.30-1) ...
187s Selecting previously unselected package libthai0:amd64.
187s Preparing to unpack .../143-libthai0_0.1.30-1_amd64.deb ...
187s Unpacking libthai0:amd64 (0.1.30-1) ...
187s Selecting previously unselected package libpango-1.0-0:amd64.
187s Preparing to unpack .../144-libpango-1.0-0_1.57.0-1_amd64.deb ...
187s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ...
187s Selecting previously unselected package libpangoft2-1.0-0:amd64.
187s Preparing to unpack .../145-libpangoft2-1.0-0_1.57.0-1_amd64.deb ...
187s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ...
187s Selecting previously unselected package libpangocairo-1.0-0:amd64.
187s Preparing to unpack .../146-libpangocairo-1.0-0_1.57.0-1_amd64.deb ...
187s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ...
187s Selecting previously unselected package libpaper2:amd64.
187s Preparing to unpack .../147-libpaper2_2.2.5-0.3build1_amd64.deb ...
187s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ...
187s Selecting previously unselected package libpaper-utils.
187s Preparing to unpack .../148-libpaper-utils_2.2.5-0.3build1_amd64.deb ...
187s Unpacking libpaper-utils (2.2.5-0.3build1) ...
187s Selecting previously unselected package libpcre2-16-0:amd64.
187s Preparing to unpack .../149-libpcre2-16-0_10.46-1_amd64.deb ...
187s Unpacking libpcre2-16-0:amd64 (10.46-1) ...
187s Selecting previously unselected package libpcre2-32-0:amd64.
187s Preparing to unpack .../150-libpcre2-32-0_10.46-1_amd64.deb ...
187s Unpacking libpcre2-32-0:amd64 (10.46-1) ...
187s Selecting previously unselected package libpcre2-posix3:amd64.
187s Preparing to unpack .../151-libpcre2-posix3_10.46-1_amd64.deb ...
187s Unpacking libpcre2-posix3:amd64 (10.46-1) ...
187s Selecting previously unselected package libpcre2-dev:amd64.
187s Preparing to unpack .../152-libpcre2-dev_10.46-1_amd64.deb ...
187s Unpacking libpcre2-dev:amd64 (10.46-1) ...
187s Selecting previously unselected package libpng-dev:amd64.
187s Preparing to unpack .../153-libpng-dev_1.6.54-1_amd64.deb ...
187s Unpacking libpng-dev:amd64 (1.6.54-1) ...
187s Selecting previously unselected package libpotrace0:amd64.
187s Preparing to unpack .../154-libpotrace0_1.16-2build2_amd64.deb ...
187s Unpacking libpotrace0:amd64 (1.16-2build2) ...
187s Selecting previously unselected package libptexenc1:amd64.
187s Preparing to unpack .../155-libptexenc1_2025.20250727.75242+ds-5build1_amd64.deb ...
187s Unpacking libptexenc1:amd64 (2025.20250727.75242+ds-5build1) ...
187s Selecting previously unselected package libreadline-dev:amd64.
187s Preparing to unpack .../156-libreadline-dev_8.3-3_amd64.deb ...
187s Unpacking libreadline-dev:amd64 (8.3-3) ...
187s Selecting previously unselected package libsharpyuv0:amd64.
187s Preparing to unpack .../157-libsharpyuv0_1.5.0-0.1build1_amd64.deb ...
187s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ...
187s Selecting previously unselected package libsm6:amd64.
187s Preparing to unpack .../158-libsm6_2%3a1.2.6-1build1_amd64.deb ...
187s Unpacking libsm6:amd64 (2:1.2.6-1build1) ...
187s Selecting previously unselected package libsynctex2:amd64.
187s Preparing to unpack .../159-libsynctex2_2025.20250727.75242+ds-5build1_amd64.deb ...
187s Unpacking libsynctex2:amd64 (2025.20250727.75242+ds-5build1) ...
187s Selecting previously unselected package libtcl8.6:amd64.
187s Preparing to unpack .../160-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ...
187s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
187s Selecting previously unselected package libteckit0:amd64.
187s Preparing to unpack .../161-libteckit0_2.5.13+ds-1_amd64.deb ...
187s Unpacking libteckit0:amd64 (2.5.13+ds-1) ...
187s Selecting previously unselected package libtexlua53-5:amd64.
187s Preparing to unpack .../162-libtexlua53-5_2025.20250727.75242+ds-5build1_amd64.deb ...
187s Unpacking libtexlua53-5:amd64 (2025.20250727.75242+ds-5build1) ...
187s Selecting previously unselected package libjbig0:amd64.
187s Preparing to unpack .../163-libjbig0_2.1-6.1ubuntu3_amd64.deb ...
187s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ...
187s Selecting previously unselected package libwebp7:amd64.
187s Preparing to unpack .../164-libwebp7_1.5.0-0.1build1_amd64.deb ...
187s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ...
187s Selecting previously unselected package libtiff6:amd64.
187s Preparing to unpack .../165-libtiff6_4.7.0-3ubuntu3_amd64.deb ...
187s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ...
187s Selecting previously unselected package libxft2:amd64.
187s Preparing to unpack .../166-libxft2_2.3.6-1build2_amd64.deb ...
187s Unpacking libxft2:amd64 (2.3.6-1build2) ...
188s Selecting previously unselected package libxss1:amd64.
188s Preparing to unpack .../167-libxss1_1%3a1.2.3-1build4_amd64.deb ...
188s Unpacking libxss1:amd64 (1:1.2.3-1build4) ...
188s Selecting previously unselected package libtk8.6:amd64.
188s Preparing to unpack .../168-libtk8.6_8.6.17-1_amd64.deb ...
188s Unpacking libtk8.6:amd64 (8.6.17-1) ...
188s Selecting previously unselected package libxt6t64:amd64.
188s Preparing to unpack .../169-libxt6t64_1%3a1.2.1-1.3_amd64.deb ...
188s Unpacking libxt6t64:amd64 (1:1.2.1-1.3) ...
188s Selecting previously unselected package libxmu6:amd64.
188s Preparing to unpack .../170-libxmu6_2%3a1.1.3-4_amd64.deb ...
188s Unpacking libxmu6:amd64 (2:1.1.3-4) ...
188s Selecting previously unselected package libxpm4:amd64.
188s Preparing to unpack .../171-libxpm4_1%3a3.5.17-1build3_amd64.deb ...
188s Unpacking libxpm4:amd64 (1:3.5.17-1build3) ...
188s Selecting previously unselected package libxaw7:amd64.
188s Preparing to unpack .../172-libxaw7_2%3a1.0.16-1build1_amd64.deb ...
188s Unpacking libxaw7:amd64 (2:1.0.16-1build1) ...
188s Selecting previously unselected package libxi6:amd64.
188s Preparing to unpack .../173-libxi6_2%3a1.8.2-2_amd64.deb ...
188s Unpacking libxi6:amd64 (2:1.8.2-2) ...
188s Selecting previously unselected package libzzip-0-13t64:amd64.
188s Preparing to unpack .../174-libzzip-0-13t64_0.13.78+dfsg.1-0.2_amd64.deb ...
188s Unpacking libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.2) ...
188s Selecting previously unselected package node-bootstrap-sass.
188s Preparing to unpack .../175-node-bootstrap-sass_3.4.3-2_all.deb ...
188s Unpacking node-bootstrap-sass (3.4.3-2) ...
188s Selecting previously unselected package node-html5shiv.
188s Preparing to unpack .../176-node-html5shiv_3.7.3+dfsg-5_all.deb ...
188s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
188s Selecting previously unselected package node-normalize.css.
188s Preparing to unpack .../177-node-normalize.css_8.0.1-5.1_all.deb ...
188s Unpacking node-normalize.css (8.0.1-5.1) ...
188s Selecting previously unselected package pandoc-data.
188s Preparing to unpack .../178-pandoc-data_3.1.11.1-3build1_all.deb ...
188s Unpacking pandoc-data (3.1.11.1-3build1) ...
188s Selecting previously unselected package pandoc.
188s Preparing to unpack .../179-pandoc_3.1.11.1+ds-4_amd64.deb ...
188s Unpacking pandoc (3.1.11.1+ds-4) ...
188s Selecting previously unselected package zip.
188s Preparing to unpack .../180-zip_3.0-15ubuntu3_amd64.deb ...
188s Unpacking zip (3.0-15ubuntu3) ...
188s Selecting previously unselected package unzip.
188s Preparing to unpack .../181-unzip_6.0-29ubuntu1_amd64.deb ...
188s Unpacking unzip (6.0-29ubuntu1) ...
188s Selecting previously unselected package xdg-utils.
188s Preparing to unpack .../182-xdg-utils_1.2.1-2ubuntu2_all.deb ...
188s Unpacking xdg-utils (1.2.1-2ubuntu2) ...
188s Selecting previously unselected package r-base-core.
188s Preparing to unpack .../183-r-base-core_4.5.2-1ubuntu2_amd64.deb ...
188s Unpacking r-base-core (4.5.2-1ubuntu2) ...
188s Selecting previously unselected package liblzma-dev:amd64.
188s Preparing to unpack .../184-liblzma-dev_5.8.2-2_amd64.deb ...
188s Unpacking liblzma-dev:amd64 (5.8.2-2) ...
188s Selecting previously unselected package libtirpc-dev:amd64.
188s Preparing to unpack .../185-libtirpc-dev_1.3.6+ds-1_amd64.deb ...
188s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ...
188s Selecting previously unselected package r-base-dev.
188s Preparing to unpack .../186-r-base-dev_4.5.2-1ubuntu2_all.deb ...
188s Unpacking r-base-dev (4.5.2-1ubuntu2) ...
188s Selecting previously unselected package pkg-r-autopkgtest.
188s Preparing to unpack .../187-pkg-r-autopkgtest_20250812_all.deb ...
188s Unpacking pkg-r-autopkgtest (20250812) ...
188s Selecting previously unselected package r-bioc-biocgenerics.
188s Preparing to unpack .../188-r-bioc-biocgenerics_0.52.0-2_all.deb ...
188s Unpacking r-bioc-biocgenerics (0.52.0-2) ...
188s Selecting previously unselected package r-bioc-alabaster.schemas.
189s Preparing to unpack .../189-r-bioc-alabaster.schemas_1.6.0+ds-2_all.deb ...
189s Unpacking r-bioc-alabaster.schemas (1.6.0+ds-2) ...
189s Selecting previously unselected package r-bioc-s4vectors.
189s Preparing to unpack .../190-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ...
189s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ...
189s Selecting previously unselected package r-bioc-rhdf5lib.
189s Preparing to unpack .../191-r-bioc-rhdf5lib_1.28.0+dfsg-3_amd64.deb ...
189s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-3) ...
189s Selecting previously unselected package r-bioc-rhdf5filters.
189s Preparing to unpack .../192-r-bioc-rhdf5filters_1.18.1+dfsg-1_amd64.deb ...
189s Unpacking r-bioc-rhdf5filters (1.18.1+dfsg-1) ...
189s Selecting previously unselected package r-bioc-rhdf5.
189s Preparing to unpack .../193-r-bioc-rhdf5_2.50.2+dfsg-1build1_amd64.deb ...
189s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ...
189s Selecting previously unselected package r-cran-jsonlite.
189s Preparing to unpack .../194-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ...
189s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
189s Selecting previously unselected package r-cran-littler.
189s Preparing to unpack .../195-r-cran-littler_0.3.22-1_amd64.deb ...
189s Unpacking r-cran-littler (0.3.22-1) ...
189s Selecting previously unselected package r-cran-pkgkitten.
189s Preparing to unpack .../196-r-cran-pkgkitten_0.2.4-1_all.deb ...
189s Unpacking r-cran-pkgkitten (0.2.4-1) ...
189s Selecting previously unselected package r-cran-rcpp.
189s Preparing to unpack .../197-r-cran-rcpp_1.1.0-1_amd64.deb ...
189s Unpacking r-cran-rcpp (1.1.0-1) ...
189s Selecting previously unselected package r-bioc-alabaster.base.
189s Preparing to unpack .../198-r-bioc-alabaster.base_1.6.1+ds-2build1_amd64.deb ...
189s Unpacking r-bioc-alabaster.base (1.6.1+ds-2build1) ...
189s Selecting previously unselected package r-cran-lattice.
189s Preparing to unpack .../199-r-cran-lattice_0.22-7-1_amd64.deb ...
189s Unpacking r-cran-lattice (0.22-7-1) ...
189s Selecting previously unselected package r-cran-matrix.
189s Preparing to unpack .../200-r-cran-matrix_1.7-4-1_amd64.deb ...
189s Unpacking r-cran-matrix (1.7-4-1) ...
189s Selecting previously unselected package r-cran-matrixstats.
189s Preparing to unpack .../201-r-cran-matrixstats_1.5.0-1_amd64.deb ...
189s Unpacking r-cran-matrixstats (1.5.0-1) ...
189s Selecting previously unselected package r-bioc-matrixgenerics.
189s Preparing to unpack .../202-r-bioc-matrixgenerics_1.18.1-1_all.deb ...
189s Unpacking r-bioc-matrixgenerics (1.18.1-1) ...
189s Selecting previously unselected package r-bioc-iranges.
189s Preparing to unpack .../203-r-bioc-iranges_2.40.1-3_amd64.deb ...
189s Unpacking r-bioc-iranges (2.40.1-3) ...
189s Selecting previously unselected package r-cran-abind.
189s Preparing to unpack .../204-r-cran-abind_1.4-8-1build1_all.deb ...
189s Unpacking r-cran-abind (1.4-8-1build1) ...
189s Selecting previously unselected package r-cran-crayon.
189s Preparing to unpack .../205-r-cran-crayon_1.5.3-1_all.deb ...
189s Unpacking r-cran-crayon (1.5.3-1) ...
189s Selecting previously unselected package r-bioc-s4arrays.
189s Preparing to unpack .../206-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ...
189s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ...
189s Selecting previously unselected package r-bioc-zlibbioc.
189s Preparing to unpack .../207-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ...
189s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ...
189s Selecting previously unselected package r-bioc-xvector.
189s Preparing to unpack .../208-r-bioc-xvector_0.46.0-2_amd64.deb ...
189s Unpacking r-bioc-xvector (0.46.0-2) ...
189s Selecting previously unselected package r-bioc-sparsearray.
189s Preparing to unpack .../209-r-bioc-sparsearray_1.6.2+dfsg-2_amd64.deb ...
189s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ...
189s Selecting previously unselected package r-bioc-delayedarray.
189s Preparing to unpack .../210-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ...
189s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ...
189s Selecting previously unselected package r-bioc-hdf5array.
189s Preparing to unpack .../211-r-bioc-hdf5array_1.34.0-2build1_amd64.deb ...
189s Unpacking r-bioc-hdf5array (1.34.0-2build1) ...
189s Selecting previously unselected package r-bioc-alabaster.matrix.
189s Preparing to unpack .../212-r-bioc-alabaster.matrix_1.6.1+ds-2_amd64.deb ...
189s Unpacking r-bioc-alabaster.matrix (1.6.1+ds-2) ...
189s Selecting previously unselected package r-cran-curl.
189s Preparing to unpack .../213-r-cran-curl_7.0.0+dfsg-1_amd64.deb ...
189s Unpacking r-cran-curl (7.0.0+dfsg-1) ...
189s Selecting previously unselected package r-cran-mime.
189s Preparing to unpack .../214-r-cran-mime_0.12-2_amd64.deb ...
189s Unpacking r-cran-mime (0.12-2) ...
189s Selecting previously unselected package r-cran-sys.
189s Preparing to unpack .../215-r-cran-sys_3.4.3-1_amd64.deb ...
189s Unpacking r-cran-sys (3.4.3-1) ...
189s Selecting previously unselected package r-cran-askpass.
189s Preparing to unpack .../216-r-cran-askpass_1.2.1-1_amd64.deb ...
189s Unpacking r-cran-askpass (1.2.1-1) ...
189s Selecting previously unselected package r-cran-openssl.
189s Preparing to unpack .../217-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ...
189s Unpacking r-cran-openssl (2.3.2+dfsg-1) ...
189s Selecting previously unselected package r-cran-r6.
189s Preparing to unpack .../218-r-cran-r6_2.6.1-1_all.deb ...
189s Unpacking r-cran-r6 (2.6.1-1) ...
189s Selecting previously unselected package r-cran-httr.
189s Preparing to unpack .../219-r-cran-httr_1.4.7+dfsg-1_all.deb ...
189s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
189s Selecting previously unselected package r-bioc-ucsc.utils.
189s Preparing to unpack .../220-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ...
189s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ...
189s Selecting previously unselected package r-bioc-genomeinfodbdata.
189s Preparing to unpack .../221-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ...
189s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ...
189s Selecting previously unselected package r-bioc-genomeinfodb.
189s Preparing to unpack .../222-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ...
189s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
189s Selecting previously unselected package r-bioc-genomicranges.
189s Preparing to unpack .../223-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ...
189s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ...
189s Selecting previously unselected package r-bioc-alabaster.ranges.
189s Preparing to unpack .../224-r-bioc-alabaster.ranges_1.6.0+ds-2_all.deb ...
189s Unpacking r-bioc-alabaster.ranges (1.6.0+ds-2) ...
189s Selecting previously unselected package r-bioc-biobase.
189s Preparing to unpack .../225-r-bioc-biobase_2.66.0-2_amd64.deb ...
189s Unpacking r-bioc-biobase (2.66.0-2) ...
189s Selecting previously unselected package r-bioc-summarizedexperiment.
189s Preparing to unpack .../226-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ...
189s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
189s Selecting previously unselected package r-bioc-singlecellexperiment.
189s Preparing to unpack .../227-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ...
189s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ...
189s Selecting previously unselected package r-bioc-alabaster.se.
189s Preparing to unpack .../228-r-bioc-alabaster.se_1.6.0+ds-2_all.deb ...
189s Unpacking r-bioc-alabaster.se (1.6.0+ds-2) ...
189s Selecting previously unselected package r-bioc-alabaster.sce.
189s Preparing to unpack .../229-r-bioc-alabaster.sce_1.6.0+ds-2_all.deb ...
189s Unpacking r-bioc-alabaster.sce (1.6.0+ds-2) ...
189s Selecting previously unselected package r-cran-dbi.
189s Preparing to unpack .../230-r-cran-dbi_1.2.3-1build1_all.deb ...
189s Unpacking r-cran-dbi (1.2.3-1build1) ...
189s Selecting previously unselected package r-cran-bit.
189s Preparing to unpack .../231-r-cran-bit_4.6.0+dfsg-1_amd64.deb ...
189s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
189s Selecting previously unselected package r-cran-bit64.
189s Preparing to unpack .../232-r-cran-bit64_4.6.0-1-4_amd64.deb ...
189s Unpacking r-cran-bit64 (4.6.0-1-4) ...
189s Selecting previously unselected package r-cran-rlang.
190s Preparing to unpack .../233-r-cran-rlang_1.1.5-3_amd64.deb ...
190s Unpacking r-cran-rlang (1.1.5-3) ...
190s Selecting previously unselected package r-cran-cli.
190s Preparing to unpack .../234-r-cran-cli_3.6.4-1_amd64.deb ...
190s Unpacking r-cran-cli (3.6.4-1) ...
190s Selecting previously unselected package r-cran-glue.
190s Preparing to unpack .../235-r-cran-glue_1.8.0-1_amd64.deb ...
190s Unpacking r-cran-glue (1.8.0-1) ...
190s Selecting previously unselected package r-cran-lifecycle.
190s Preparing to unpack .../236-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
190s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
190s Selecting previously unselected package r-cran-vctrs.
190s Preparing to unpack .../237-r-cran-vctrs_0.6.5-1_amd64.deb ...
190s Unpacking r-cran-vctrs (0.6.5-1) ...
190s Selecting previously unselected package r-cran-blob.
190s Preparing to unpack .../238-r-cran-blob_1.3.0-1_all.deb ...
190s Unpacking r-cran-blob (1.3.0-1) ...
190s Selecting previously unselected package r-cran-fastmap.
190s Preparing to unpack .../239-r-cran-fastmap_1.2.0-1_amd64.deb ...
190s Unpacking r-cran-fastmap (1.2.0-1) ...
190s Selecting previously unselected package r-cran-cachem.
190s Preparing to unpack .../240-r-cran-cachem_1.1.0-1_amd64.deb ...
190s Unpacking r-cran-cachem (1.1.0-1) ...
190s Selecting previously unselected package r-cran-memoise.
190s Preparing to unpack .../241-r-cran-memoise_2.0.1-1build1_all.deb ...
190s Unpacking r-cran-memoise (2.0.1-1build1) ...
190s Selecting previously unselected package r-cran-pkgconfig.
190s Preparing to unpack .../242-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
190s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
190s Selecting previously unselected package r-cran-plogr.
190s Preparing to unpack .../243-r-cran-plogr_0.2.0-3build2_all.deb ...
190s Unpacking r-cran-plogr (0.2.0-3build2) ...
190s Selecting previously unselected package r-cran-cpp11.
190s Preparing to unpack .../244-r-cran-cpp11_0.5.3-1_all.deb ...
190s Unpacking r-cran-cpp11 (0.5.3-1) ...
190s Selecting previously unselected package r-cran-rsqlite.
190s Preparing to unpack .../245-r-cran-rsqlite_2.3.9-1_amd64.deb ...
190s Unpacking r-cran-rsqlite (2.3.9-1) ...
190s Selecting previously unselected package r-cran-png.
190s Preparing to unpack .../246-r-cran-png_0.1-8-1build2_amd64.deb ...
190s Unpacking r-cran-png (0.1-8-1build2) ...
190s Selecting previously unselected package r-bioc-biostrings.
190s Preparing to unpack .../247-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ...
190s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ...
190s Selecting previously unselected package r-bioc-keggrest.
190s Preparing to unpack .../248-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ...
190s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ...
190s Selecting previously unselected package r-bioc-annotationdbi.
190s Preparing to unpack .../249-r-bioc-annotationdbi_1.68.0-2_all.deb ...
190s Unpacking r-bioc-annotationdbi (1.68.0-2) ...
190s Selecting previously unselected package r-cran-lazyeval.
190s Preparing to unpack .../250-r-cran-lazyeval_0.2.2-1build2_amd64.deb ...
190s Unpacking r-cran-lazyeval (0.2.2-1build2) ...
190s Selecting previously unselected package r-bioc-annotationfilter.
190s Preparing to unpack .../251-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ...
190s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ...
190s Selecting previously unselected package r-cran-generics.
190s Preparing to unpack .../252-r-cran-generics_0.1.4-1_all.deb ...
190s Unpacking r-cran-generics (0.1.4-1) ...
190s Selecting previously unselected package r-cran-magrittr.
190s Preparing to unpack .../253-r-cran-magrittr_2.0.3-1_amd64.deb ...
190s Unpacking r-cran-magrittr (2.0.3-1) ...
190s Selecting previously unselected package r-cran-utf8.
190s Preparing to unpack .../254-r-cran-utf8_1.2.4-1_amd64.deb ...
190s Unpacking r-cran-utf8 (1.2.4-1) ...
190s Selecting previously unselected package r-cran-pillar.
190s Preparing to unpack .../255-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
190s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
190s Selecting previously unselected package r-cran-fansi.
190s Preparing to unpack .../256-r-cran-fansi_1.0.6-2_amd64.deb ...
190s Unpacking r-cran-fansi (1.0.6-2) ...
190s Selecting previously unselected package r-cran-tibble.
190s Preparing to unpack .../257-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
190s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
190s Selecting previously unselected package r-cran-withr.
190s Preparing to unpack .../258-r-cran-withr_3.0.2+dfsg-1_all.deb ...
190s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
190s Selecting previously unselected package r-cran-tidyselect.
190s Preparing to unpack .../259-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
190s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
190s Selecting previously unselected package r-cran-dplyr.
190s Preparing to unpack .../260-r-cran-dplyr_1.1.4-4_amd64.deb ...
190s Unpacking r-cran-dplyr (1.1.4-4) ...
190s Selecting previously unselected package r-cran-purrr.
190s Preparing to unpack .../261-r-cran-purrr_1.0.4-1_amd64.deb ...
190s Unpacking r-cran-purrr (1.0.4-1) ...
190s Selecting previously unselected package r-cran-stringi.
190s Preparing to unpack .../262-r-cran-stringi_1.8.4-1build2_amd64.deb ...
190s Unpacking r-cran-stringi (1.8.4-1build2) ...
190s Selecting previously unselected package r-cran-stringr.
190s Preparing to unpack .../263-r-cran-stringr_1.5.1-1_all.deb ...
190s Unpacking r-cran-stringr (1.5.1-1) ...
190s Selecting previously unselected package r-cran-tidyr.
190s Preparing to unpack .../264-r-cran-tidyr_1.3.1-1_amd64.deb ...
190s Unpacking r-cran-tidyr (1.3.1-1) ...
190s Selecting previously unselected package r-cran-dbplyr.
190s Preparing to unpack .../265-r-cran-dbplyr_2.5.1+dfsg-1_all.deb ...
190s Unpacking r-cran-dbplyr (2.5.1+dfsg-1) ...
190s Selecting previously unselected package r-cran-filelock.
190s Preparing to unpack .../266-r-cran-filelock_1.0.3-1_amd64.deb ...
190s Unpacking r-cran-filelock (1.0.3-1) ...
190s Selecting previously unselected package r-bioc-biocfilecache.
190s Preparing to unpack .../267-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ...
190s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ...
190s Selecting previously unselected package r-cran-biocmanager.
190s Preparing to unpack .../268-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ...
190s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ...
190s Selecting previously unselected package r-bioc-biocversion.
190s Preparing to unpack .../269-r-bioc-biocversion_3.20.0-2_all.deb ...
190s Unpacking r-bioc-biocversion (3.20.0-2) ...
190s Selecting previously unselected package r-cran-rappdirs.
190s Preparing to unpack .../270-r-cran-rappdirs_0.3.3-1build1_amd64.deb ...
190s Unpacking r-cran-rappdirs (0.3.3-1build1) ...
190s Selecting previously unselected package r-cran-yaml.
190s Preparing to unpack .../271-r-cran-yaml_2.3.10-1_amd64.deb ...
190s Unpacking r-cran-yaml (2.3.10-1) ...
190s Selecting previously unselected package r-bioc-annotationhub.
190s Preparing to unpack .../272-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ...
190s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ...
190s Selecting previously unselected package r-bioc-assorthead.
190s Preparing to unpack .../273-r-bioc-assorthead_1.0.1+ds-2_all.deb ...
190s Unpacking r-bioc-assorthead (1.0.1+ds-2) ...
190s Selecting previously unselected package r-cran-rcpptoml.
190s Preparing to unpack .../274-r-cran-rcpptoml_0.2.3+dfsg-1_amd64.deb ...
190s Unpacking r-cran-rcpptoml (0.2.3+dfsg-1) ...
190s Selecting previously unselected package r-cran-rprojroot.
190s Preparing to unpack .../275-r-cran-rprojroot_2.1.1-1_all.deb ...
190s Unpacking r-cran-rprojroot (2.1.1-1) ...
190s Selecting previously unselected package r-cran-here.
190s Preparing to unpack .../276-r-cran-here_1.0.2-1_all.deb ...
190s Unpacking r-cran-here (1.0.2-1) ...
190s Selecting previously unselected package r-cran-reticulate.
190s Preparing to unpack .../277-r-cran-reticulate_1.41.0.1+dfsg-1_amd64.deb ...
190s Unpacking r-cran-reticulate (1.41.0.1+dfsg-1) ...
190s Selecting previously unselected package r-bioc-dir.expiry.
190s Preparing to unpack .../278-r-bioc-dir.expiry_1.14.0+ds-2_all.deb ...
190s Unpacking r-bioc-dir.expiry (1.14.0+ds-2) ...
191s Selecting previously unselected package r-bioc-basilisk.utils.
191s Preparing to unpack .../279-r-bioc-basilisk.utils_1.18.0+ds-2_all.deb ...
191s Unpacking r-bioc-basilisk.utils (1.18.0+ds-2) ...
191s Selecting previously unselected package r-bioc-basilisk.
191s Preparing to unpack .../280-r-bioc-basilisk_1.18.0+ds-2_amd64.deb ...
191s Unpacking r-bioc-basilisk (1.18.0+ds-2) ...
191s Selecting previously unselected package r-bioc-beachmat.
191s Preparing to unpack .../281-r-bioc-beachmat_2.22.0+ds-3_amd64.deb ...
191s Unpacking r-bioc-beachmat (2.22.0+ds-3) ...
191s Selecting previously unselected package r-bioc-biocio.
191s Preparing to unpack .../282-r-bioc-biocio_1.16.0+dfsg-2_all.deb ...
191s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ...
191s Selecting previously unselected package r-bioc-biocneighbors.
191s Preparing to unpack .../283-r-bioc-biocneighbors_2.0.1+ds-2_amd64.deb ...
191s Unpacking r-bioc-biocneighbors (2.0.1+ds-2) ...
191s Selecting previously unselected package r-cran-formatr.
191s Preparing to unpack .../284-r-cran-formatr_1.14-2_all.deb ...
191s Unpacking r-cran-formatr (1.14-2) ...
191s Selecting previously unselected package r-cran-lambda.r.
191s Preparing to unpack .../285-r-cran-lambda.r_1.2.4-2build2_all.deb ...
191s Unpacking r-cran-lambda.r (1.2.4-2build2) ...
191s Selecting previously unselected package r-cran-futile.options.
191s Preparing to unpack .../286-r-cran-futile.options_1.0.1-3build2_all.deb ...
191s Unpacking r-cran-futile.options (1.0.1-3build2) ...
191s Selecting previously unselected package r-cran-futile.logger.
191s Preparing to unpack .../287-r-cran-futile.logger_1.4.3-4build2_all.deb ...
191s Unpacking r-cran-futile.logger (1.4.3-4build2) ...
191s Selecting previously unselected package r-cran-snow.
191s Preparing to unpack .../288-r-cran-snow_1%3a0.4.4-2build1_all.deb ...
191s Unpacking r-cran-snow (1:0.4.4-2build1) ...
191s Selecting previously unselected package r-cran-codetools.
191s Preparing to unpack .../289-r-cran-codetools_0.2-20-1build1_all.deb ...
191s Unpacking r-cran-codetools (0.2-20-1build1) ...
191s Selecting previously unselected package r-cran-bh.
191s Preparing to unpack .../290-r-cran-bh_1.84.0-1_all.deb ...
191s Unpacking r-cran-bh (1.84.0-1) ...
191s Selecting previously unselected package r-bioc-biocparallel.
191s Preparing to unpack .../291-r-bioc-biocparallel_1.40.0-2_amd64.deb ...
191s Unpacking r-bioc-biocparallel (1.40.0-2) ...
191s Selecting previously unselected package r-bioc-scaledmatrix.
191s Preparing to unpack .../292-r-bioc-scaledmatrix_1.14.0+dfsg-2_all.deb ...
191s Unpacking r-bioc-scaledmatrix (1.14.0+dfsg-2) ...
191s Selecting previously unselected package r-cran-irlba.
191s Preparing to unpack .../293-r-cran-irlba_2.3.5.1-4_amd64.deb ...
191s Unpacking r-cran-irlba (2.3.5.1-4) ...
191s Selecting previously unselected package r-cran-rsvd.
191s Preparing to unpack .../294-r-cran-rsvd_1.0.5-1build1_all.deb ...
191s Unpacking r-cran-rsvd (1.0.5-1build1) ...
191s Selecting previously unselected package r-bioc-biocsingular.
191s Preparing to unpack .../295-r-bioc-biocsingular_1.22.0+ds-2_amd64.deb ...
191s Unpacking r-bioc-biocsingular (1.22.0+ds-2) ...
191s Selecting previously unselected package r-cran-base64enc.
191s Preparing to unpack .../296-r-cran-base64enc_0.1-3-3build1_amd64.deb ...
191s Unpacking r-cran-base64enc (0.1-3-3build1) ...
191s Selecting previously unselected package r-cran-digest.
191s Preparing to unpack .../297-r-cran-digest_0.6.39-1_amd64.deb ...
191s Unpacking r-cran-digest (0.6.39-1) ...
191s Selecting previously unselected package r-cran-htmltools.
191s Preparing to unpack .../298-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
191s Unpacking r-cran-htmltools (0.5.8.1-1) ...
191s Selecting previously unselected package r-cran-evaluate.
191s Preparing to unpack .../299-r-cran-evaluate_1.0.5-1_all.deb ...
191s Unpacking r-cran-evaluate (1.0.5-1) ...
191s Selecting previously unselected package r-cran-xfun.
191s Preparing to unpack .../300-r-cran-xfun_0.55+dfsg-1_amd64.deb ...
191s Unpacking r-cran-xfun (0.55+dfsg-1) ...
191s Selecting previously unselected package r-cran-highr.
191s Preparing to unpack .../301-r-cran-highr_0.11+dfsg-1_all.deb ...
191s Unpacking r-cran-highr (0.11+dfsg-1) ...
191s Selecting previously unselected package libjs-mathjax.
191s Preparing to unpack .../302-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ...
191s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ...
191s Selecting previously unselected package r-cran-knitr.
191s Preparing to unpack .../303-r-cran-knitr_1.51+dfsg-1_all.deb ...
191s Unpacking r-cran-knitr (1.51+dfsg-1) ...
191s Selecting previously unselected package r-cran-jquerylib.
191s Preparing to unpack .../304-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ...
191s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ...
191s Selecting previously unselected package r-cran-fs.
191s Preparing to unpack .../305-r-cran-fs_1.6.5+dfsg-1_amd64.deb ...
191s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
191s Selecting previously unselected package r-cran-sass.
191s Preparing to unpack .../306-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
191s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
191s Selecting previously unselected package r-cran-bslib.
191s Preparing to unpack .../307-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
191s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
191s Selecting previously unselected package r-cran-fontawesome.
191s Preparing to unpack .../308-r-cran-fontawesome_0.5.3-1_all.deb ...
191s Unpacking r-cran-fontawesome (0.5.3-1) ...
191s Selecting previously unselected package r-cran-tinytex.
191s Preparing to unpack .../309-r-cran-tinytex_0.58-1_all.deb ...
191s Unpacking r-cran-tinytex (0.58-1) ...
191s Selecting previously unselected package libjs-modernizr.
191s Preparing to unpack .../310-libjs-modernizr_3.13.0-0.1build1_all.deb ...
191s Unpacking libjs-modernizr (3.13.0-0.1build1) ...
191s Selecting previously unselected package r-cran-later.
191s Preparing to unpack .../311-r-cran-later_1.4.1+dfsg-1_amd64.deb ...
191s Unpacking r-cran-later (1.4.1+dfsg-1) ...
191s Selecting previously unselected package r-cran-promises.
191s Preparing to unpack .../312-r-cran-promises_1.3.2+dfsg-1_amd64.deb ...
191s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
191s Selecting previously unselected package r-cran-httpuv.
191s Preparing to unpack .../313-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ...
191s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
191s Selecting previously unselected package r-cran-xtable.
191s Preparing to unpack .../314-r-cran-xtable_1%3a1.8-4-2build1_all.deb ...
191s Unpacking r-cran-xtable (1:1.8-4-2build1) ...
191s Selecting previously unselected package r-cran-sourcetools.
191s Preparing to unpack .../315-r-cran-sourcetools_0.1.7-1-1_amd64.deb ...
191s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
192s Selecting previously unselected package r-cran-commonmark.
192s Preparing to unpack .../316-r-cran-commonmark_1.9.5-1_amd64.deb ...
192s Unpacking r-cran-commonmark (1.9.5-1) ...
192s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
192s Preparing to unpack .../317-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
192s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
192s Selecting previously unselected package r-cran-shiny.
192s Preparing to unpack .../318-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
192s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
192s Selecting previously unselected package r-cran-rmarkdown.
192s Preparing to unpack .../319-r-cran-rmarkdown_2.30+dfsg-1_all.deb ...
192s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ...
192s Selecting previously unselected package r-cran-bookdown.
192s Preparing to unpack .../320-r-cran-bookdown_0.42+dfsg-1_all.deb ...
192s Unpacking r-cran-bookdown (0.42+dfsg-1) ...
192s Selecting previously unselected package tex-common.
192s Preparing to unpack .../321-tex-common_6.20_all.deb ...
192s Unpacking tex-common (6.20) ...
192s Selecting previously unselected package t1utils.
192s Preparing to unpack .../322-t1utils_1.41-4build4_amd64.deb ...
192s Unpacking t1utils (1.41-4build4) ...
192s Selecting previously unselected package texlive-binaries.
192s Preparing to unpack .../323-texlive-binaries_2025.20250727.75242+ds-5build1_amd64.deb ...
192s Unpacking texlive-binaries (2025.20250727.75242+ds-5build1) ...
192s Selecting previously unselected package texlive-base.
192s Preparing to unpack .../324-texlive-base_2025.20260124-1_all.deb ...
192s Unpacking texlive-base (2025.20260124-1) ...
192s Selecting previously unselected package texlive-latex-base.
192s Preparing to unpack .../325-texlive-latex-base_2025.20260124-1_all.deb ...
192s Unpacking texlive-latex-base (2025.20260124-1) ...
192s Selecting previously unselected package texlive-bibtex-extra.
192s Preparing to unpack .../326-texlive-bibtex-extra_2025.20260124-1_all.deb ...
192s Unpacking texlive-bibtex-extra (2025.20260124-1) ...
194s Selecting previously unselected package r-bioc-biocstyle.
194s Preparing to unpack .../327-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ...
194s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ...
194s Selecting previously unselected package r-cran-hms.
194s Preparing to unpack .../328-r-cran-hms_1.1.4-1_all.deb ...
194s Unpacking r-cran-hms (1.1.4-1) ...
194s Selecting previously unselected package r-cran-prettyunits.
194s Preparing to unpack .../329-r-cran-prettyunits_1.2.0-1_all.deb ...
194s Unpacking r-cran-prettyunits (1.2.0-1) ...
194s Selecting previously unselected package r-cran-progress.
194s Preparing to unpack .../330-r-cran-progress_1.2.3-1_all.deb ...
194s Unpacking r-cran-progress (1.2.3-1) ...
194s Selecting previously unselected package r-cran-httr2.
194s Preparing to unpack .../331-r-cran-httr2_1.1.1-2_all.deb ...
194s Unpacking r-cran-httr2 (1.1.1-2) ...
194s Selecting previously unselected package r-cran-xml2.
194s Preparing to unpack .../332-r-cran-xml2_1.4.1-1_amd64.deb ...
194s Unpacking r-cran-xml2 (1.4.1-1) ...
194s Selecting previously unselected package r-bioc-biomart.
194s Preparing to unpack .../333-r-bioc-biomart_2.62.1+dfsg-1_all.deb ...
194s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ...
194s Selecting previously unselected package r-bioc-sparsematrixstats.
194s Preparing to unpack .../334-r-bioc-sparsematrixstats_1.18.0+dfsg-2_amd64.deb ...
194s Unpacking r-bioc-sparsematrixstats (1.18.0+dfsg-2) ...
194s Selecting previously unselected package r-bioc-delayedmatrixstats.
194s Preparing to unpack .../335-r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb ...
194s Unpacking r-bioc-delayedmatrixstats (1.28.1+ds-1) ...
194s Selecting previously unselected package r-cran-assertthat.
194s Preparing to unpack .../336-r-cran-assertthat_0.2.1-3_all.deb ...
194s Unpacking r-cran-assertthat (0.2.1-3) ...
194s Selecting previously unselected package r-cran-rtsne.
194s Preparing to unpack .../337-r-cran-rtsne_0.17-1_amd64.deb ...
194s Unpacking r-cran-rtsne (0.17-1) ...
194s Selecting previously unselected package r-bioc-densvis.
194s Preparing to unpack .../338-r-bioc-densvis_1.16.0+dfsg-2_amd64.deb ...
194s Unpacking r-bioc-densvis (1.16.0+dfsg-2) ...
194s Selecting previously unselected package r-cran-xml.
194s Preparing to unpack .../339-r-cran-xml_3.99-0.20-1_amd64.deb ...
194s Unpacking r-cran-xml (3.99-0.20-1) ...
194s Selecting previously unselected package r-cran-bitops.
194s Preparing to unpack .../340-r-cran-bitops_1.0-9-1_amd64.deb ...
194s Unpacking r-cran-bitops (1.0-9-1) ...
194s Selecting previously unselected package r-bioc-rhtslib.
194s Preparing to unpack .../341-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ...
194s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ...
194s Selecting previously unselected package r-bioc-rsamtools.
194s Preparing to unpack .../342-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ...
194s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ...
194s Selecting previously unselected package r-bioc-genomicalignments.
194s Preparing to unpack .../343-r-bioc-genomicalignments_1.42.0-2_amd64.deb ...
194s Unpacking r-bioc-genomicalignments (1.42.0-2) ...
194s Selecting previously unselected package r-cran-rcurl.
194s Preparing to unpack .../344-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ...
194s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ...
194s Selecting previously unselected package r-cran-rjson.
194s Preparing to unpack .../345-r-cran-rjson_0.2.23-1_amd64.deb ...
194s Unpacking r-cran-rjson (0.2.23-1) ...
194s Selecting previously unselected package r-cran-restfulr.
194s Preparing to unpack .../346-r-cran-restfulr_0.0.15-1_amd64.deb ...
194s Unpacking r-cran-restfulr (0.0.15-1) ...
194s Selecting previously unselected package r-bioc-rtracklayer.
194s Preparing to unpack .../347-r-bioc-rtracklayer_1.66.0-3_amd64.deb ...
194s Unpacking r-bioc-rtracklayer (1.66.0-3) ...
194s Selecting previously unselected package r-bioc-genomicfeatures.
194s Preparing to unpack .../348-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ...
194s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ...
194s Selecting previously unselected package r-bioc-protgenerics.
194s Preparing to unpack .../349-r-bioc-protgenerics_1.38.0-2_all.deb ...
194s Unpacking r-bioc-protgenerics (1.38.0-2) ...
194s Selecting previously unselected package r-bioc-ensembldb.
194s Preparing to unpack .../350-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ...
194s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ...
194s Selecting previously unselected package r-bioc-experimenthub.
194s Preparing to unpack .../351-r-bioc-experimenthub_2.14.0+ds-2_all.deb ...
194s Unpacking r-bioc-experimenthub (2.14.0+ds-2) ...
194s Selecting previously unselected package r-bioc-gypsum.
194s Preparing to unpack .../352-r-bioc-gypsum_1.2.0+ds-2_all.deb ...
194s Unpacking r-bioc-gypsum (1.2.0+ds-2) ...
194s Selecting previously unselected package r-bioc-scuttle.
194s Preparing to unpack .../353-r-bioc-scuttle_1.16.0+dfsg-3_amd64.deb ...
194s Unpacking r-bioc-scuttle (1.16.0+dfsg-3) ...
194s Selecting previously unselected package r-cran-gtable.
194s Preparing to unpack .../354-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
194s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
194s Selecting previously unselected package r-cran-isoband.
194s Preparing to unpack .../355-r-cran-isoband_0.2.7-1_amd64.deb ...
194s Unpacking r-cran-isoband (0.2.7-1) ...
194s Selecting previously unselected package r-cran-s7.
194s Preparing to unpack .../356-r-cran-s7_0.2.0-1_amd64.deb ...
194s Unpacking r-cran-s7 (0.2.0-1) ...
194s Selecting previously unselected package r-cran-farver.
194s Preparing to unpack .../357-r-cran-farver_2.1.2-1_amd64.deb ...
194s Unpacking r-cran-farver (2.1.2-1) ...
194s Selecting previously unselected package r-cran-labeling.
194s Preparing to unpack .../358-r-cran-labeling_0.4.3-1_all.deb ...
194s Unpacking r-cran-labeling (0.4.3-1) ...
194s Selecting previously unselected package r-cran-rcolorbrewer.
194s Preparing to unpack .../359-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ...
194s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ...
194s Selecting previously unselected package r-cran-viridislite.
194s Preparing to unpack .../360-r-cran-viridislite_0.4.3-1_all.deb ...
194s Unpacking r-cran-viridislite (0.4.3-1) ...
195s Selecting previously unselected package r-cran-scales.
195s Preparing to unpack .../361-r-cran-scales_1.4.0-1_all.deb ...
195s Unpacking r-cran-scales (1.4.0-1) ...
195s Selecting previously unselected package r-cran-ggplot2.
195s Preparing to unpack .../362-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ...
195s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ...
195s Selecting previously unselected package r-cran-beeswarm.
195s Preparing to unpack .../363-r-cran-beeswarm_0.4.0-1build1_amd64.deb ...
195s Unpacking r-cran-beeswarm (0.4.0-1build1) ...
195s Selecting previously unselected package r-cran-vipor.
195s Preparing to unpack .../364-r-cran-vipor_0.4.7-1_all.deb ...
195s Unpacking r-cran-vipor (0.4.7-1) ...
195s Selecting previously unselected package r-cran-ggbeeswarm.
195s Preparing to unpack .../365-r-cran-ggbeeswarm_0.7.3-1_all.deb ...
195s Unpacking r-cran-ggbeeswarm (0.7.3-1) ...
195s Selecting previously unselected package r-cran-gridextra.
195s Preparing to unpack .../366-r-cran-gridextra_2.3-3build2_all.deb ...
195s Unpacking r-cran-gridextra (2.3-3build2) ...
195s Selecting previously unselected package r-cran-viridis.
195s Preparing to unpack .../367-r-cran-viridis_0.6.5-1_all.deb ...
195s Unpacking r-cran-viridis (0.6.5-1) ...
195s Selecting previously unselected package r-cran-rcppeigen.
195s Preparing to unpack .../368-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ...
195s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ...
195s Selecting previously unselected package r-cran-rcppml.
195s Preparing to unpack .../369-r-cran-rcppml_0.3.7-2_amd64.deb ...
195s Unpacking r-cran-rcppml (0.3.7-2) ...
195s Selecting previously unselected package r-cran-fnn.
195s Preparing to unpack .../370-r-cran-fnn_1.1.4.1-1_amd64.deb ...
195s Unpacking r-cran-fnn (1.1.4.1-1) ...
195s Selecting previously unselected package r-cran-rcppannoy.
195s Preparing to unpack .../371-r-cran-rcppannoy_0.0.22-1_amd64.deb ...
195s Unpacking r-cran-rcppannoy (0.0.22-1) ...
195s Selecting previously unselected package r-cran-rspectra.
195s Preparing to unpack .../372-r-cran-rspectra_0.16-2-1_amd64.deb ...
195s Unpacking r-cran-rspectra (0.16-2-1) ...
195s Selecting previously unselected package r-cran-sitmo.
195s Preparing to unpack .../373-r-cran-sitmo_2.0.2-1build1_amd64.deb ...
195s Unpacking r-cran-sitmo (2.0.2-1build1) ...
195s Selecting previously unselected package r-cran-dqrng.
195s Preparing to unpack .../374-r-cran-dqrng_0.3.2+dfsg-1_amd64.deb ...
195s Unpacking r-cran-dqrng (0.3.2+dfsg-1) ...
195s Selecting previously unselected package r-cran-rcppprogress.
195s Preparing to unpack .../375-r-cran-rcppprogress_0.4.2-2build2_all.deb ...
195s Unpacking r-cran-rcppprogress (0.4.2-2build2) ...
195s Selecting previously unselected package r-cran-uwot.
195s Preparing to unpack .../376-r-cran-uwot_0.2.3-1_amd64.deb ...
195s Unpacking r-cran-uwot (0.2.3-1) ...
195s Selecting previously unselected package r-cran-pheatmap.
195s Preparing to unpack .../377-r-cran-pheatmap_1.0.13-1_all.deb ...
195s Unpacking r-cran-pheatmap (1.0.13-1) ...
195s Selecting previously unselected package r-cran-ggrepel.
195s Preparing to unpack .../378-r-cran-ggrepel_0.9.6-1_amd64.deb ...
195s Unpacking r-cran-ggrepel (0.9.6-1) ...
195s Selecting previously unselected package r-cran-cairo.
195s Preparing to unpack .../379-r-cran-cairo_1.6-2-1_amd64.deb ...
195s Unpacking r-cran-cairo (1.6-2-1) ...
195s Selecting previously unselected package r-cran-systemfonts.
195s Preparing to unpack .../380-r-cran-systemfonts_1.2.1-1_amd64.deb ...
195s Unpacking r-cran-systemfonts (1.2.1-1) ...
195s Selecting previously unselected package r-cran-textshaping.
195s Preparing to unpack .../381-r-cran-textshaping_0.3.7-2_amd64.deb ...
195s Unpacking r-cran-textshaping (0.3.7-2) ...
195s Selecting previously unselected package r-cran-ragg.
195s Preparing to unpack .../382-r-cran-ragg_1.3.3-1_amd64.deb ...
195s Unpacking r-cran-ragg (1.3.3-1) ...
195s Selecting previously unselected package r-cran-ggrastr.
195s Preparing to unpack .../383-r-cran-ggrastr_1.0.2-1_all.deb ...
195s Unpacking r-cran-ggrastr (1.0.2-1) ...
195s Selecting previously unselected package r-bioc-scater.
195s Preparing to unpack .../384-r-bioc-scater_1.34.1+ds-1_all.deb ...
195s Unpacking r-bioc-scater (1.34.1+ds-1) ...
195s Selecting previously unselected package r-bioc-scrnaseq.
195s Preparing to unpack .../385-r-bioc-scrnaseq_2.20.0+ds-2_all.deb ...
195s Unpacking r-bioc-scrnaseq (2.20.0+ds-2) ...
195s Selecting previously unselected package r-cran-brio.
195s Preparing to unpack .../386-r-cran-brio_1.1.5-1_amd64.deb ...
195s Unpacking r-cran-brio (1.1.5-1) ...
195s Selecting previously unselected package r-cran-ps.
195s Preparing to unpack .../387-r-cran-ps_1.9.0-1_amd64.deb ...
195s Unpacking r-cran-ps (1.9.0-1) ...
195s Selecting previously unselected package r-cran-processx.
195s Preparing to unpack .../388-r-cran-processx_3.8.6-1_amd64.deb ...
195s Unpacking r-cran-processx (3.8.6-1) ...
195s Selecting previously unselected package r-cran-callr.
195s Preparing to unpack .../389-r-cran-callr_3.7.6-1_all.deb ...
195s Unpacking r-cran-callr (3.7.6-1) ...
195s Selecting previously unselected package r-cran-cowplot.
195s Preparing to unpack .../390-r-cran-cowplot_1.1.3+dfsg-1_all.deb ...
195s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ...
195s Selecting previously unselected package r-cran-deoptimr.
195s Preparing to unpack .../391-r-cran-deoptimr_1.1-4-1_all.deb ...
195s Unpacking r-cran-deoptimr (1.1-4-1) ...
195s Selecting previously unselected package r-cran-desc.
195s Preparing to unpack .../392-r-cran-desc_1.4.3-1_all.deb ...
195s Unpacking r-cran-desc (1.4.3-1) ...
195s Selecting previously unselected package r-cran-diffobj.
195s Preparing to unpack .../393-r-cran-diffobj_0.3.5-1build1_amd64.deb ...
195s Unpacking r-cran-diffobj (0.3.5-1build1) ...
195s Selecting previously unselected package r-cran-pkgbuild.
195s Preparing to unpack .../394-r-cran-pkgbuild_1.4.8-1_all.deb ...
195s Unpacking r-cran-pkgbuild (1.4.8-1) ...
195s Selecting previously unselected package r-cran-pkgload.
195s Preparing to unpack .../395-r-cran-pkgload_1.4.1-1_all.deb ...
195s Unpacking r-cran-pkgload (1.4.1-1) ...
195s Selecting previously unselected package r-cran-praise.
195s Preparing to unpack .../396-r-cran-praise_1.0.0-4build2_all.deb ...
195s Unpacking r-cran-praise (1.0.0-4build2) ...
195s Selecting previously unselected package r-cran-robustbase.
195s Preparing to unpack .../397-r-cran-robustbase_0.99-7-1_amd64.deb ...
195s Unpacking r-cran-robustbase (0.99-7-1) ...
195s Selecting previously unselected package r-cran-scattermore.
195s Preparing to unpack .../398-r-cran-scattermore_1.2-1_amd64.deb ...
195s Unpacking r-cran-scattermore (1.2-1) ...
195s Selecting previously unselected package r-cran-waldo.
195s Preparing to unpack .../399-r-cran-waldo_0.6.2-1_all.deb ...
195s Unpacking r-cran-waldo (0.6.2-1) ...
195s Selecting previously unselected package r-cran-testthat.
195s Preparing to unpack .../400-r-cran-testthat_3.2.3-1_amd64.deb ...
195s Unpacking r-cran-testthat (3.2.3-1) ...
196s Setting up libjs-json (0~20221030+~1.0.8-1build1) ...
196s Setting up javascript-common (12+nmu1build1) ...
196s Setting up libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
196s Setting up libgnutls-openssl27t64:amd64 (3.8.10-3ubuntu1) ...
196s Setting up libpixman-1-0:amd64 (0.46.4-1) ...
196s Setting up libsharpyuv0:amd64 (1.5.0-0.1build1) ...
196s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ...
196s Setting up libzstd-dev:amd64 (1.5.7+dfsg-3) ...
196s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
196s Setting up libxpm4:amd64 (1:3.5.17-1build3) ...
196s Setting up hdf5-helpers (1.14.6+repack-2) ...
196s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ...
196s Setting up libxi6:amd64 (2:1.8.2-2) ...
196s Setting up libxrender1:amd64 (1:0.9.12-1) ...
196s Setting up libdatrie1:amd64 (0.2.14-1) ...
196s Setting up libjs-popper.js (1.16.1+ds-6build1) ...
196s Setting up libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
196s Setting up libjs-sifter.js (0.6.0+dfsg-3) ...
196s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
196s Setting up libjs-lunr (2.3.9~dfsg-2) ...
196s Setting up unzip (6.0-29ubuntu1) ...
196s Setting up liblatex-tounicode-perl (1.93-1) ...
196s Setting up x11-common (1:7.7+24ubuntu1) ...
196s Setting up node-html5shiv (3.7.3+dfsg-5) ...
196s Setting up libdeflate0:amd64 (1.23-2build1) ...
196s Setting up linux-libc-dev:amd64 (6.19.0-3.3) ...
196s Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
196s Setting up libjs-microplugin.js (0.0.3+dfsg-2) ...
196s Setting up libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
196s Setting up libgomp1:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libjs-modernizr (3.13.0-0.1build1) ...
196s Setting up libjbig0:amd64 (2.1-6.1ubuntu3) ...
196s Setting up libpcre2-16-0:amd64 (10.46-1) ...
196s Setting up libaec0:amd64 (1.1.5-1) ...
196s Setting up libpsl-dev:amd64 (0.21.2-1.1build2) ...
196s Setting up libsnappy1v5:amd64 (1.2.2-2) ...
196s Setting up libjs-es5-shim (4.6.7-2) ...
196s Setting up tex-common (6.20) ...
196s update-language: texlive-base not installed and configured, doing nothing!
196s Setting up libio-string-perl (1.08-4) ...
196s Setting up zip (3.0-15ubuntu3) ...
196s Setting up libpcre2-32-0:amd64 (10.46-1) ...
196s Setting up libblas3:amd64 (3.12.1-7ubuntu1) ...
196s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
196s Setting up libunbound8:amd64 (1.24.2-1ubuntu1) ...
196s Setting up libtirpc-dev:amd64 (1.3.6+ds-1) ...
196s Setting up libpkgconf3:amd64 (1.8.1-4build1) ...
196s Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5ubuntu1) ...
196s Setting up rpcsvc-proto (1.4.3-1build1) ...
196s Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.2) ...
196s Setting up libgnutls-dane0t64:amd64 (3.8.10-3ubuntu1) ...
196s Setting up libteckit0:amd64 (2.5.13+ds-1) ...
196s Setting up libgssrpc4t64:amd64 (1.22.1-2) ...
196s Setting up libldap-dev:amd64 (2.6.10+dfsg-1ubuntu5) ...
196s Setting up t1utils (1.41-4build4) ...
196s Setting up libquadmath0:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libtexlua53-5:amd64 (2025.20250727.75242+ds-5build1) ...
196s Setting up libjs-d3 (3.5.17-4build1) ...
196s Setting up fonts-dejavu-mono (2.37-8build1) ...
196s Setting up libssl-dev:amd64 (3.5.3-1ubuntu2) ...
196s Setting up libmpc3:amd64 (1.3.1-2) ...
196s Setting up libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
196s Setting up libmpfi0:amd64 (1.5.4+ds-4build1) ...
196s Setting up icu-devtools (78.2-1ubuntu1) ...
196s Setting up fonts-dejavu-core (2.37-8build1) ...
196s Setting up pkgconf-bin (1.8.1-4build1) ...
196s Setting up libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
196s Setting up libidn2-dev:amd64 (2.3.8-4build1) ...
196s Setting up libkpathsea6:amd64 (2025.20250727.75242+ds-5build1) ...
196s Setting up libgfortran5:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libwebp7:amd64 (1.5.0-0.1build1) ...
196s Setting up liblzma-dev:amd64 (5.8.2-2) ...
196s Setting up libubsan1:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libpcre2-posix3:amd64 (10.46-1) ...
196s Setting up libjs-highlight.js (10.7.3+dfsg-2) ...
196s Setting up libhwasan0:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libcrypt-dev:amd64 (1:4.5.1-1) ...
196s Setting up libasan8:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libblosc1:amd64 (1.21.5+ds-2) ...
196s Setting up fonts-lmodern (2.005-1build1) ...
196s Setting up liblua5.4-0:amd64 (5.4.8-1) ...
196s Setting up libharfbuzz0b:amd64 (12.3.2-1) ...
196s Setting up libthai-data (0.1.30-1) ...
196s Setting up node-bootstrap-sass (3.4.3-2) ...
196s Setting up libjs-prettify (2015.12.04+dfsg-3) ...
196s Setting up libxss1:amd64 (1:1.2.3-1build4) ...
196s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ...
196s Setting up libpaper2:amd64 (2.2.5-0.3build1) ...
196s Setting up pandoc-data (3.1.11.1-3build1) ...
196s Setting up libtsan2:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
196s Setting up libisl23:amd64 (0.27-1build1) ...
196s Setting up libc-dev-bin (2.42-2ubuntu4) ...
196s Setting up libtasn1-6-dev:amd64 (4.21.0-2) ...
196s Setting up libdeflate-dev:amd64 (1.23-2build1) ...
196s Setting up node-normalize.css (8.0.1-5.1) ...
196s Setting up libhnswlib-dev (0.8.0-1build4) ...
196s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
196s Setting up xdg-utils (1.2.1-2ubuntu2) ...
196s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
196s Setting up libcc1-0:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libbrotli-dev:amd64 (1.1.0-2build6) ...
196s Setting up liblsan0:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libp11-kit-dev:amd64 (0.25.10-1) ...
196s Setting up libblas-dev:amd64 (3.12.1-7ubuntu1) ...
196s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
196s Setting up libsz2:amd64 (1.1.5-1) ...
196s Setting up dctrl-tools (2.24-3build4) ...
196s Setting up libjs-bootstrap (3.4.1+dfsg-6) ...
196s Setting up libitm1:amd64 (16-20260208-1ubuntu1) ...
196s Setting up libsynctex2:amd64 (2025.20250727.75242+ds-5build1) ...
196s Setting up libkadm5clnt-mit12:amd64 (1.22.1-2) ...
196s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
196s Setting up libpotrace0:amd64 (1.16-2build2) ...
196s Setting up libjpeg8:amd64 (8c-2ubuntu12) ...
196s Setting up libice6:amd64 (2:1.1.1-1build1) ...
196s Setting up liblapack3:amd64 (3.12.1-7ubuntu1) ...
196s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
196s Setting up libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
196s Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-5ubuntu1) ...
196s Setting up nettle-dev:amd64 (3.10.2-1) ...
196s Setting up libkdb5-10t64:amd64 (1.22.1-2) ...
196s Setting up fontconfig-config (2.17.1-3ubuntu1) ...
196s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
196s Setting up libaec-dev:amd64 (1.1.5-1) ...
196s Setting up libpaper-utils (2.2.5-0.3build1) ...
196s Setting up cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
196s Setting up libbibtex-parser-perl (1.93+dfsg-1) ...
196s Setting up libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
196s Setting up libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
196s Setting up pkgconf:amd64 (1.8.1-4build1) ...
196s Setting up gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
196s Setting up libthai0:amd64 (0.1.30-1) ...
196s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ...
196s Setting up libptexenc1:amd64 (2025.20250727.75242+ds-5build1) ...
196s Setting up pandoc (3.1.11.1+ds-4) ...
196s Setting up liblapack-dev:amd64 (3.12.1-7ubuntu1) ...
196s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
196s Setting up libhdf5-310:amd64 (1.14.6+repack-2) ...
196s Setting up cpp-15 (15.2.0-12ubuntu1) ...
196s Setting up libtiff6:amd64 (4.7.0-3ubuntu3) ...
196s Setting up libkadm5srv-mit12:amd64 (1.22.1-2) ...
196s Setting up libc6-dev:amd64 (2.42-2ubuntu4) ...
196s Setting up libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
196s Setting up libhdf5-fortran-310:amd64 (1.14.6+repack-2) ...
196s Setting up libsm6:amd64 (2:1.2.6-1build1) ...
196s Setting up libicu-dev:amd64 (78.2-1ubuntu1) ...
196s Setting up libbz2-dev:amd64 (1.0.8-6build2) ...
196s Setting up libhdf5-cpp-310:amd64 (1.14.6+repack-2) ...
196s Setting up cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
196s Setting up libgnutls28-dev:amd64 (3.8.10-3ubuntu1) ...
196s Setting up gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
196s Setting up libnghttp2-dev:amd64 (1.64.0-1.1ubuntu1) ...
196s Setting up libhdf5-hl-310:amd64 (1.14.6+repack-2) ...
196s Setting up fontconfig (2.17.1-3ubuntu1) ...
198s Regenerating fonts cache... done.
198s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ...
198s Setting up libxft2:amd64 (2.3.6-1build2) ...
198s Setting up libncurses-dev:amd64 (6.6+20251231-1) ...
198s Setting up libpcre2-dev:amd64 (10.46-1) ...
198s Setting up gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
198s Setting up libtk8.6:amd64 (8.6.17-1) ...
198s Setting up libpango-1.0-0:amd64 (1.57.0-1) ...
198s Setting up libreadline-dev:amd64 (8.3-3) ...
198s Setting up gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
198s Setting up libcairo2:amd64 (1.18.4-3) ...
198s Setting up gcc-15 (15.2.0-12ubuntu1) ...
198s Setting up libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
198s Setting up libxt6t64:amd64 (1:1.2.1-1.3) ...
198s Setting up comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ...
198s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
198s Setting up cpp (4:15.2.0-4ubuntu1) ...
198s Setting up libboost1.90-dev:amd64 (1.90.0-2ubuntu1) ...
198s Setting up libboost-dev:amd64 (1.90.0.0ubuntu3) ...
198s Setting up libpangoft2-1.0-0:amd64 (1.57.0-1) ...
198s Setting up libjpeg8-dev:amd64 (8c-2ubuntu12) ...
198s Setting up gfortran-15 (15.2.0-12ubuntu1) ...
198s Setting up libpangocairo-1.0-0:amd64 (1.57.0-1) ...
198s Setting up krb5-multidev:amd64 (1.22.1-2) ...
198s Setting up libhdf5-hl-cpp-310:amd64 (1.14.6+repack-2) ...
198s Setting up libhdf5-hl-fortran-310:amd64 (1.14.6+repack-2) ...
198s Setting up g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
198s Setting up libxmu6:amd64 (2:1.1.3-4) ...
198s Setting up libpng-dev:amd64 (1.6.54-1) ...
198s Setting up libjpeg-dev:amd64 (8c-2ubuntu12) ...
198s Setting up libxaw7:amd64 (2:1.0.16-1build1) ...
198s Setting up gcc (4:15.2.0-4ubuntu1) ...
198s Setting up libkrb5-dev:amd64 (1.22.1-2) ...
198s Setting up r-base-core (4.5.2-1ubuntu2) ...
198s Creating config file /etc/R/Renviron with new version
198s Setting up r-cran-crayon (1.5.3-1) ...
198s Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-3) ...
198s Setting up r-cran-labeling (0.4.3-1) ...
198s Setting up r-cran-rcppprogress (0.4.2-2build2) ...
198s Setting up r-cran-sourcetools (0.1.7-1-1) ...
198s Setting up r-cran-futile.options (1.0.1-3build2) ...
198s Setting up r-cran-lattice (0.22-7-1) ...
198s Setting up libssh2-1-dev:amd64 (1.11.1-1build1) ...
198s Setting up r-cran-ps (1.9.0-1) ...
198s Setting up r-cran-farver (2.1.2-1) ...
198s Setting up r-cran-formatr (1.14-2) ...
198s Setting up r-cran-xml (3.99-0.20-1) ...
198s Setting up r-cran-viridislite (0.4.3-1) ...
198s Setting up texlive-binaries (2025.20250727.75242+ds-5build1) ...
198s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
198s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
198s Setting up g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
198s Setting up r-cran-lazyeval (0.2.2-1build2) ...
198s Setting up r-cran-commonmark (1.9.5-1) ...
198s Setting up r-cran-rjson (0.2.23-1) ...
198s Setting up r-cran-r6 (2.6.1-1) ...
198s Setting up r-cran-pkgkitten (0.2.4-1) ...
198s Setting up texlive-base (2025.20260124-1) ...
199s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
199s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
199s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
199s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
199s Setting up g++-15 (15.2.0-12ubuntu1) ...
199s Setting up r-cran-magrittr (2.0.3-1) ...
199s Setting up r-cran-rappdirs (0.3.3-1build1) ...
199s Setting up r-cran-filelock (1.0.3-1) ...
199s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ...
199s Setting up r-cran-littler (0.3.22-1) ...
199s Setting up r-cran-bh (1.84.0-1) ...
199s Setting up r-cran-fs (1.6.5+dfsg-1) ...
199s Setting up r-cran-rcpp (1.1.0-1) ...
199s Setting up r-cran-curl (7.0.0+dfsg-1) ...
199s Setting up r-cran-codetools (0.2-20-1build1) ...
199s Setting up r-cran-brio (1.1.5-1) ...
199s Setting up r-cran-diffobj (0.3.5-1build1) ...
199s Setting up r-bioc-biocgenerics (0.52.0-2) ...
199s Setting up r-cran-rlang (1.1.5-3) ...
200s Setting up r-cran-matrixstats (1.5.0-1) ...
200s Setting up r-cran-assertthat (0.2.1-3) ...
200s Setting up r-bioc-matrixgenerics (1.18.1-1) ...
200s Setting up r-cran-xfun (0.55+dfsg-1) ...
200s Setting up r-cran-sys (3.4.3-1) ...
200s Setting up r-cran-deoptimr (1.1-4-1) ...
200s Setting up r-cran-plogr (0.2.0-3build2) ...
200s Setting up r-cran-withr (3.0.2+dfsg-1) ...
200s Setting up r-cran-processx (3.8.6-1) ...
200s Setting up r-cran-mime (0.12-2) ...
200s Setting up r-cran-praise (1.0.0-4build2) ...
200s Setting up r-cran-vipor (0.4.7-1) ...
200s Setting up r-cran-generics (0.1.4-1) ...
200s Setting up r-cran-base64enc (0.1-3-3build1) ...
200s Setting up r-cran-beeswarm (0.4.0-1build1) ...
200s Setting up r-cran-abind (1.4-8-1build1) ...
200s Setting up r-cran-digest (0.6.39-1) ...
200s Setting up r-cran-yaml (2.3.10-1) ...
200s Setting up r-cran-lambda.r (1.2.4-2build2) ...
200s Setting up r-bioc-protgenerics (1.38.0-2) ...
200s Setting up r-cran-evaluate (1.0.5-1) ...
200s Setting up r-cran-dbi (1.2.3-1build1) ...
200s Setting up r-cran-highr (0.11+dfsg-1) ...
200s Setting up r-cran-prettyunits (1.2.0-1) ...
200s Setting up r-cran-fansi (1.0.6-2) ...
200s Setting up r-cran-cairo (1.6-2-1) ...
200s Setting up r-cran-snow (1:0.4.4-2build1) ...
200s Setting up r-cran-glue (1.8.0-1) ...
200s Setting up r-cran-bit (4.6.0+dfsg-1) ...
200s Setting up r-cran-xtable (1:1.8-4-2build1) ...
200s Setting up r-cran-cli (3.6.4-1) ...
200s Setting up gfortran (4:15.2.0-4ubuntu1) ...
200s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
200s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
200s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
200s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
200s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ...
200s Setting up r-cran-bitops (1.0-9-1) ...
200s Setting up r-bioc-biocversion (3.20.0-2) ...
200s Setting up r-cran-rprojroot (2.1.1-1) ...
200s Setting up r-cran-fnn (1.1.4.1-1) ...
200s Setting up r-cran-bit64 (4.6.0-1-4) ...
200s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ...
200s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ...
200s Setting up r-cran-askpass (1.2.1-1) ...
200s Setting up r-cran-fastmap (1.2.0-1) ...
200s Setting up r-cran-png (0.1-8-1build2) ...
200s Setting up r-bioc-biobase (2.66.0-2) ...
200s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
200s Setting up r-cran-pkgconfig (2.0.3-2build2) ...
200s Setting up r-cran-utf8 (1.2.4-1) ...
200s Setting up r-cran-stringi (1.8.4-1build2) ...
200s Setting up texlive-latex-base (2025.20260124-1) ...
200s Setting up r-cran-s7 (0.2.0-1) ...
200s Setting up libcurl4-openssl-dev:amd64 (8.18.0-1ubuntu1) ...
200s Setting up r-cran-cpp11 (0.5.3-1) ...
200s Setting up r-cran-sitmo (2.0.2-1build1) ...
200s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ...
200s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ...
200s Setting up r-cran-isoband (0.2.7-1) ...
200s Setting up r-cran-futile.logger (1.4.3-4build2) ...
200s Setting up r-cran-waldo (0.6.2-1) ...
200s Setting up libhdf5-dev (1.14.6+repack-2) ...
200s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
200s Setting up r-cran-scales (1.4.0-1) ...
200s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
200s Setting up r-cran-later (1.4.1+dfsg-1) ...
200s Setting up r-cran-matrix (1.7-4-1) ...
200s Setting up r-cran-here (1.0.2-1) ...
200s Setting up r-cran-htmltools (0.5.8.1-1) ...
200s Setting up r-cran-tinytex (0.58-1) ...
200s Setting up r-cran-irlba (2.3.5.1-4) ...
200s Setting up r-cran-knitr (1.51+dfsg-1) ...
200s Setting up r-cran-rcpptoml (0.2.3+dfsg-1) ...
200s Setting up g++ (4:15.2.0-4ubuntu1) ...
200s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
200s Setting up r-cran-robustbase (0.99-7-1) ...
200s Setting up r-cran-cachem (1.1.0-1) ...
200s Setting up r-cran-sass (0.4.9+dfsg-1) ...
200s Setting up build-essential (12.12ubuntu2) ...
200s Setting up r-cran-rtsne (0.17-1) ...
200s Setting up r-bioc-iranges (2.40.1-3) ...
200s Setting up r-cran-dqrng (0.3.2+dfsg-1) ...
200s Setting up r-bioc-assorthead (1.0.1+ds-2) ...
200s Setting up r-cran-reticulate (1.41.0.1+dfsg-1) ...
200s Setting up r-bioc-dir.expiry (1.14.0+ds-2) ...
200s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ...
200s Setting up r-cran-restfulr (0.0.15-1) ...
200s Setting up r-bioc-biocneighbors (2.0.1+ds-2) ...
200s Setting up r-bioc-sparsematrixstats (1.18.0+dfsg-2) ...
200s Setting up r-cran-vctrs (0.6.5-1) ...
200s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
200s Setting up r-bioc-alabaster.schemas (1.6.0+ds-2) ...
200s Setting up r-cran-pillar (1.11.1+dfsg-1) ...
200s Setting up r-bioc-basilisk.utils (1.18.0+ds-2) ...
200s Setting up r-cran-pheatmap (1.0.13-1) ...
200s Setting up r-cran-rcppannoy (0.0.22-1) ...
200s Setting up r-cran-openssl (2.3.2+dfsg-1) ...
200s Setting up r-base-dev (4.5.2-1ubuntu2) ...
200s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ...
200s Setting up r-cran-stringr (1.5.1-1) ...
200s Setting up r-bioc-biocparallel (1.40.0-2) ...
200s Setting up r-cran-callr (3.7.6-1) ...
200s Setting up r-cran-ggplot2 (4.0.2+dfsg-1) ...
200s Setting up r-cran-scattermore (1.2-1) ...
200s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ...
200s Setting up r-cran-desc (1.4.3-1) ...
200s Setting up r-cran-xml2 (1.4.1-1) ...
200s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
200s Setting up r-bioc-rhdf5lib (1.28.0+dfsg-3) ...
200s Setting up r-cran-fontawesome (0.5.3-1) ...
200s Setting up r-bioc-biocio (1.16.0+dfsg-2) ...
200s Setting up r-bioc-rhdf5filters (1.18.1+dfsg-1) ...
200s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ...
200s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
200s Setting up texlive-bibtex-extra (2025.20260124-1) ...
200s Setting up r-cran-rsvd (1.0.5-1build1) ...
200s Setting up r-cran-httr2 (1.1.1-2) ...
200s Setting up r-bioc-basilisk (1.18.0+ds-2) ...
200s Setting up r-cran-systemfonts (1.2.1-1) ...
200s Setting up r-cran-httr (1.4.7+dfsg-1) ...
200s Setting up r-bioc-gypsum (1.2.0+ds-2) ...
200s Setting up r-cran-gridextra (2.3-3build2) ...
200s Setting up r-cran-hms (1.1.4-1) ...
200s Setting up r-cran-memoise (2.0.1-1build1) ...
200s Setting up r-cran-promises (1.3.2+dfsg-1) ...
200s Setting up r-cran-purrr (1.0.4-1) ...
200s Setting up r-cran-ggrepel (0.9.6-1) ...
200s Setting up r-cran-blob (1.3.0-1) ...
200s Setting up pkg-r-autopkgtest (20250812) ...
200s Setting up r-bioc-xvector (0.46.0-2) ...
200s Setting up r-cran-pkgbuild (1.4.8-1) ...
200s Setting up r-cran-rcppml (0.3.7-2) ...
200s Setting up r-cran-dplyr (1.1.4-4) ...
200s Setting up r-cran-rspectra (0.16-2-1) ...
200s Setting up r-cran-rsqlite (2.3.9-1) ...
200s Setting up r-cran-uwot (0.2.3-1) ...
200s Setting up r-cran-ggbeeswarm (0.7.3-1) ...
200s Setting up r-cran-progress (1.2.3-1) ...
200s Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
200s Setting up r-cran-pkgload (1.4.1-1) ...
200s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ...
200s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ...
200s Setting up r-bioc-rhdf5 (2.50.2+dfsg-1build1) ...
200s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
200s Setting up r-cran-textshaping (0.3.7-2) ...
200s Setting up r-bioc-densvis (1.16.0+dfsg-2) ...
200s Setting up r-cran-viridis (0.6.5-1) ...
200s Setting up r-cran-testthat (3.2.3-1) ...
200s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
200s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
200s Setting up r-cran-ragg (1.3.3-1) ...
200s Setting up r-bioc-alabaster.base (1.6.1+ds-2build1) ...
200s Setting up r-cran-ggrastr (1.0.2-1) ...
200s Setting up r-cran-tidyr (1.3.1-1) ...
200s Setting up r-cran-dbplyr (2.5.1+dfsg-1) ...
200s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ...
200s Setting up r-bioc-hdf5array (1.34.0-2build1) ...
200s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ...
200s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ...
200s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ...
200s Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ...
200s Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ...
200s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
200s Setting up r-bioc-alabaster.matrix (1.6.1+ds-2) ...
200s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
200s Setting up r-bioc-beachmat (2.22.0+ds-3) ...
200s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ...
200s Setting up r-bioc-scaledmatrix (1.14.0+dfsg-2) ...
200s Setting up r-cran-bookdown (0.42+dfsg-1) ...
200s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
200s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ...
200s Setting up r-bioc-biocsingular (1.22.0+ds-2) ...
200s Setting up r-bioc-alabaster.ranges (1.6.0+ds-2) ...
200s Setting up r-bioc-annotationdbi (1.68.0-2) ...
200s Setting up r-bioc-annotationhub (3.14.0+dfsg-2) ...
200s Setting up r-bioc-biomart (2.62.1+dfsg-1) ...
200s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ...
200s Setting up r-bioc-genomicalignments (1.42.0-2) ...
200s Setting up r-bioc-alabaster.se (1.6.0+ds-2) ...
200s Setting up r-bioc-rtracklayer (1.66.0-3) ...
200s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ...
200s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ...
200s Setting up r-bioc-experimenthub (2.14.0+ds-2) ...
200s Setting up r-bioc-scuttle (1.16.0+dfsg-3) ...
200s Setting up r-bioc-alabaster.sce (1.6.0+ds-2) ...
200s Setting up r-bioc-ensembldb (2.30.0+dfsg-3) ...
200s Setting up r-bioc-scrnaseq (2.20.0+ds-2) ...
200s Setting up r-bioc-scater (1.34.1+ds-1) ...
200s Processing triggers for libc-bin (2.42-2ubuntu4) ...
200s Processing triggers for man-db (2.13.1-1build1) ...
201s Processing triggers for install-info (7.2-5) ...
201s Processing triggers for tex-common (6.20) ...
201s Running updmap-sys. This may take some time... done.
201s Running mktexlsr /var/lib/texmf ... done.
201s Building format(s) --all.
215s 	This may take some time... done.
216s autopkgtest [04:22:40]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
216s autopkgtest [04:22:40]: test pkg-r-autopkgtest: [-----------------------
216s Test: Try to load the R library scater
216s 
216s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
216s Copyright (C) 2025 The R Foundation for Statistical Computing
216s Platform: x86_64-pc-linux-gnu
216s 
216s R is free software and comes with ABSOLUTELY NO WARRANTY.
216s You are welcome to redistribute it under certain conditions.
216s Type 'license()' or 'licence()' for distribution details.
216s 
216s R is a collaborative project with many contributors.
216s Type 'contributors()' for more information and
216s 'citation()' on how to cite R or R packages in publications.
216s 
216s Type 'demo()' for some demos, 'help()' for on-line help, or
216s 'help.start()' for an HTML browser interface to help.
216s Type 'q()' to quit R.
216s 
216s > library('scater')
216s Loading required package: SingleCellExperiment
216s Loading required package: SummarizedExperiment
216s Loading required package: MatrixGenerics
216s Loading required package: matrixStats
216s 
216s Attaching package: ‘MatrixGenerics’
216s 
216s The following objects are masked from ‘package:matrixStats’:
216s 
216s     colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
216s     colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
216s     colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
216s     colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
216s     colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
216s     colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
216s     colWeightedMeans, colWeightedMedians, colWeightedSds,
216s     colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
216s     rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
216s     rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
216s     rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
216s     rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
216s     rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
216s     rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
216s     rowWeightedSds, rowWeightedVars
216s 
216s Loading required package: GenomicRanges
216s Loading required package: stats4
216s Loading required package: BiocGenerics
216s 
216s Attaching package: ‘BiocGenerics’
216s 
216s The following objects are masked from ‘package:stats’:
216s 
216s     IQR, mad, sd, var, xtabs
216s 
216s The following objects are masked from ‘package:base’:
216s 
216s     anyDuplicated, aperm, append, as.data.frame, basename, cbind,
216s     colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find,
216s     get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply,
216s     match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
216s     Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff,
216s     table, tapply, union, unique, unsplit, which.max, which.min
216s 
216s Loading required package: S4Vectors
217s 
217s Attaching package: ‘S4Vectors’
217s 
217s The following object is masked from ‘package:utils’:
217s 
217s     findMatches
217s 
217s The following objects are masked from ‘package:base’:
217s 
217s     expand.grid, I, unname
217s 
217s Loading required package: IRanges
217s Loading required package: GenomeInfoDb
217s Loading required package: Biobase
218s Welcome to Bioconductor
218s 
218s     Vignettes contain introductory material; view with
218s     'browseVignettes()'. To cite Bioconductor, see
218s     'citation("Biobase")', and for packages 'citation("pkgname")'.
218s 
218s 
218s Attaching package: ‘Biobase’
218s 
218s The following object is masked from ‘package:MatrixGenerics’:
218s 
218s     rowMedians
218s 
218s The following objects are masked from ‘package:matrixStats’:
218s 
218s     anyMissing, rowMedians
218s 
220s Loading required package: scuttle
220s Loading required package: ggplot2
221s > 
221s Test: Run tests for scater
221s Start: testthat.R
221s 
221s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
221s Copyright (C) 2025 The R Foundation for Statistical Computing
221s Platform: x86_64-pc-linux-gnu
221s 
221s R is free software and comes with ABSOLUTELY NO WARRANTY.
221s You are welcome to redistribute it under certain conditions.
221s Type 'license()' or 'licence()' for distribution details.
221s 
221s R is a collaborative project with many contributors.
221s Type 'contributors()' for more information and
221s 'citation()' on how to cite R or R packages in publications.
221s 
221s Type 'demo()' for some demos, 'help()' for on-line help, or
221s 'help.start()' for an HTML browser interface to help.
221s Type 'q()' to quit R.
221s 
221s > Sys.setenv("R_TESTS" = "")
221s > library(testthat)
221s > library(scater)
221s Loading required package: SingleCellExperiment
221s Loading required package: SummarizedExperiment
221s Loading required package: MatrixGenerics
221s Loading required package: matrixStats
221s 
221s Attaching package: ‘MatrixGenerics’
221s 
221s The following objects are masked from ‘package:matrixStats’:
221s 
221s     colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
221s     colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
221s     colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
221s     colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
221s     colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
221s     colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
221s     colWeightedMeans, colWeightedMedians, colWeightedSds,
221s     colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
221s     rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
221s     rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
221s     rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
221s     rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
221s     rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
221s     rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
221s     rowWeightedSds, rowWeightedVars
221s 
221s Loading required package: GenomicRanges
221s Loading required package: stats4
221s Loading required package: BiocGenerics
221s 
221s Attaching package: ‘BiocGenerics’
221s 
221s The following objects are masked from ‘package:stats’:
221s 
221s     IQR, mad, sd, var, xtabs
221s 
221s The following objects are masked from ‘package:base’:
221s 
221s     anyDuplicated, aperm, append, as.data.frame, basename, cbind,
221s     colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find,
221s     get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply,
221s     match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
221s     Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff,
221s     table, tapply, union, unique, unsplit, which.max, which.min
221s 
221s Loading required package: S4Vectors
222s 
222s Attaching package: ‘S4Vectors’
222s 
222s The following object is masked from ‘package:utils’:
222s 
222s     findMatches
222s 
222s The following objects are masked from ‘package:base’:
222s 
222s     expand.grid, I, unname
222s 
222s Loading required package: IRanges
222s Loading required package: GenomeInfoDb
222s Loading required package: Biobase
223s Welcome to Bioconductor
223s 
223s     Vignettes contain introductory material; view with
223s     'browseVignettes()'. To cite Bioconductor, see
223s     'citation("Biobase")', and for packages 'citation("pkgname")'.
223s 
223s 
223s Attaching package: ‘Biobase’
223s 
223s The following object is masked from ‘package:MatrixGenerics’:
223s 
223s     rowMedians
223s 
223s The following objects are masked from ‘package:matrixStats’:
223s 
223s     anyMissing, rowMedians
223s 
225s Loading required package: scuttle
225s Loading required package: ggplot2
226s > 
226s > test_check("scater")
227s Loading required package: Matrix
227s 
227s Attaching package: ‘Matrix’
227s 
227s The following object is masked from ‘package:S4Vectors’:
227s 
227s     expand
227s 
227s Loading required package: S4Arrays
227s Loading required package: abind
227s 
227s Attaching package: ‘S4Arrays’
227s 
227s The following object is masked from ‘package:abind’:
227s 
227s     abind
227s 
227s The following object is masked from ‘package:base’:
227s 
227s     rowsum
227s 
227s Loading required package: SparseArray
227s 
227s Attaching package: ‘DelayedArray’
227s 
227s The following objects are masked from ‘package:base’:
227s 
227s     apply, scale, sweep
227s 
278s [ FAIL 0 | WARN 31 | SKIP 1 | PASS 699 ]
278s 
278s ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
278s • Skipping since Debian is lacking Bioconductor package snifter (1):
278s   'test-red-dim.R:68:1'
278s 
278s [ FAIL 0 | WARN 31 | SKIP 1 | PASS 699 ]
278s > 
278s autopkgtest [04:23:42]: test pkg-r-autopkgtest: -----------------------]
279s pkg-r-autopkgtest    PASS
279s autopkgtest [04:23:43]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
279s autopkgtest [04:23:43]: @@@@@@@@@@@@@@@@@@@@ summary
279s pkg-r-autopkgtest    PASS