0s autopkgtest [04:13:50]: starting date and time: 2026-02-10 04:13:50+0000 0s autopkgtest [04:13:50]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [04:13:50]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.r5g_7svt/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-ioniser --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-22.secgroup --name adt-resolute-amd64-r-bioc-ioniser-20260210-041350-juju-7f2275-prod-proposed-migration-environment-2-6be06611-b438-439a-9748-7e562a366b2b --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-amd64-r-bioc-ioniser-20260210-041350-juju-7f2275-prod-proposed-migration-environment-2-6be06611-b438-439a-9748-7e562a366b2b from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)... 77s autopkgtest [04:15:07]: testbed dpkg architecture: amd64 77s autopkgtest [04:15:07]: testbed apt version: 3.1.14 77s autopkgtest [04:15:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 78s autopkgtest [04:15:08]: testbed release detected to be: None 78s autopkgtest [04:15:08]: updating testbed package index (apt update) 78s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 78s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 78s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 78s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 79s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1735 kB] 79s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB] 79s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [181 kB] 79s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [268 kB] 79s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [220 kB] 79s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5980 B] 79s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B] 79s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [768 kB] 79s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1791 kB] 79s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.6 kB] 79s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB] 81s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B] 81s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B] 82s Fetched 5189 kB in 3s (1983 kB/s) 82s Reading package lists... 83s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 83s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 83s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 83s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 83s Reading package lists... 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 84s Calculating upgrade... 84s The following package was automatically installed and is no longer required: 84s libpython3.13 84s Use 'sudo apt autoremove' to remove it. 84s The following NEW packages will be installed: 84s gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib 84s linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic 84s linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic 84s linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic 84s The following packages will be upgraded: 84s 3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static 84s cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common 84s dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install 84s ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2 84s iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0 84s libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common 84s libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64 84s libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0 84s libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0 84s libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64 84s libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0 84s libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic 84s linux-headers-virtual linux-image-generic linux-image-virtual linux-perf 84s linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids 84s pollinate python3-linkify-it python3-markdown-it python3-referencing sed 84s shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget 84s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. 84s Need to get 237 MB of archives. 84s After this operation, 339 MB of additional disk space will be used. 84s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB] 84s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB] 84s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB] 84s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB] 84s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB] 84s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB] 84s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB] 84s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB] 84s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB] 84s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB] 84s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB] 84s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB] 84s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB] 84s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB] 84s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB] 84s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B] 84s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB] 84s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB] 84s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB] 84s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB] 84s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB] 84s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB] 84s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB] 84s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB] 84s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB] 84s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB] 84s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB] 84s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB] 85s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB] 85s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB] 85s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB] 85s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB] 85s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB] 85s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB] 85s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB] 85s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB] 85s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB] 85s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB] 85s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB] 85s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB] 85s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB] 85s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB] 85s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB] 85s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB] 85s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B] 85s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB] 85s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB] 85s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB] 85s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB] 85s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB] 85s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB] 85s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB] 85s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB] 85s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB] 85s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB] 85s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B] 85s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB] 85s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB] 85s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B] 85s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB] 85s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB] 85s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB] 85s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB] 85s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB] 85s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB] 85s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB] 85s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB] 85s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB] 85s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB] 85s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B] 85s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB] 85s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB] 85s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB] 85s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B] 85s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB] 85s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B] 85s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB] 85s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB] 85s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB] 85s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB] 85s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB] 85s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB] 89s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB] 90s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB] 90s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B] 90s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB] 90s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B] 90s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB] 90s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B] 90s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB] 90s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB] 90s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB] 90s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB] 90s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB] 90s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB] 90s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B] 90s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB] 90s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB] 90s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 90s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB] 90s dpkg-preconfigure: unable to re-open stdin: No such file or directory 90s Fetched 237 MB in 6s (36.8 MB/s) 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 91s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ... 91s Unpacking debianutils (5.23.2build1) over (5.23.2) ... 91s Setting up debianutils (5.23.2build1) ... 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 91s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ... 91s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ... 91s Setting up dash (0.5.12-12ubuntu3) ... 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 91s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ... 91s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ... 91s Setting up findutils (4.10.0-3build2) ... 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 91s Preparing to unpack .../sed_4.9-2build3_amd64.deb ... 91s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 91s Setting up sed (4.9-2build3) ... 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 91s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ... 91s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ... 91s Setting up tar (1.35+dfsg-3.1build2) ... 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 91s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ... 91s Unpacking libattr1:amd64 (1:2.5.2-3build2) over (1:2.5.2-3build1) ... 91s Setting up libattr1:amd64 (1:2.5.2-3build2) ... 91s Selecting previously unselected package gcc-16-base:amd64. 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 91s Preparing to unpack .../gcc-16-base_16-20260208-1ubuntu1_amd64.deb ... 91s Unpacking gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 91s Setting up gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 91s (Reading database ... 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(7.7.0+6.19.0-3.3) ... 99s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ... 99s Setting up liblsof0 (4.99.4+dfsg-2build2) ... 99s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ... 99s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ... 99s Setting up libsensors-config (1:3.6.2-2build1) ... 99s Setting up less (668-1build1) ... 99s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ... 99s Setting up libidn2-0:amd64 (2.3.8-4build1) ... 99s Setting up amd64-microcode (3.20251202.1ubuntu1) ... 99s amd64-microcode: microcode will be updated at next boot 99s Setting up man-db (2.13.1-1build1) ... 99s Updating database of manual pages ... 100s man-db.service is a disabled or a static unit not running, not starting it. 100s Setting up libjansson4:amd64 (2.14-2build4) ... 100s Setting up libglib2.0-data (2.87.2-2) ... 100s Setting up pollinate (4.33-4ubuntu5) ... 111s Setting up busybox-static (1:1.37.0-7ubuntu1) ... 111s Setting up libwrap0:amd64 (7.6.q-36build2) ... 111s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ... 112s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic 112s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic 112s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ... 112s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ... 112s Setting up patch (2.8-2build1) ... 112s Setting up libsensors5:amd64 (1:3.6.2-2build1) ... 112s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ... 112s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ... 112s Setting up lsof (4.99.4+dfsg-2build2) ... 112s Setting up libpci3:amd64 (1:3.14.0-1build2) ... 112s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ... 112s Setting up dracut-install (109-11ubuntu1) ... 112s Setting up dmsetup (2:1.02.205-2ubuntu3) ... 112s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ... 112s Setting up pnp.ids (0.394-1build1) ... 112s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ... 112s Setting up python3-linkify-it (2.0.3-1ubuntu3) ... 112s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ... 112s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ... 112s Setting up mawk (1.3.4.20260129-1) ... 112s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ... 112s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ... 112s Setting up linux-image-virtual (6.19.0-3.3) ... 112s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ... 112s Setting up libbsd0:amd64 (0.12.2-2build2) ... 112s Setting up libdrm-common (2.4.131-1) ... 112s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ... 112s Setting up dbus-bin (1.16.2-2ubuntu3) ... 112s Setting up libonig5:amd64 (6.9.10-1build1) ... 112s Setting up libbpf1:amd64 (1:1.6.2-1build1) ... 112s Setting up ethtool (1:6.15-3build1) ... 112s Setting up python3-referencing (0.36.2-1ubuntu2) ... 112s Setting up libxkbcommon0:amd64 (1.13.1-1) ... 112s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 112s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ... 112s Setting up tcpdump (4.99.5-2ubuntu3) ... 112s Setting up linux-image-generic (6.19.0-3.3) ... 112s Setting up wget (1.25.0-2ubuntu4) ... 112s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ... 112s Setting up iptables (1.8.11-2ubuntu3) ... 112s Setting up iproute2 (6.18.0-1ubuntu1) ... 113s Setting up linux-headers-generic (6.19.0-3.3) ... 113s Setting up dbus-daemon (1.16.2-2ubuntu3) ... 113s Setting up hwdata (0.394-1build1) ... 113s Setting up dbus-user-session (1.16.2-2ubuntu3) ... 113s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ... 113s No schema files found: doing nothing. 113s Setting up dbus (1.16.2-2ubuntu3) ... 113s A reboot is required to replace the running dbus-daemon. 113s Please reboot the system when convenient. 113s Setting up shared-mime-info (2.4-5build3) ... 113s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ... 113s Setting up pciutils (1:3.14.0-1build2) ... 113s Setting up python3-markdown-it (3.0.0-3build1) ... 113s Setting up libdrm2:amd64 (2.4.131-1) ... 114s Setting up libpython3.14:amd64 (3.14.2-1) ... 114s Setting up libapt-pkg7.0:amd64 (3.1.15) ... 114s Setting up linux-tools-common (6.19.0-3.3) ... 114s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ... 114s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ... 114s Setting up apt (3.1.15) ... 114s Setting up linux-headers-virtual (6.19.0-3.3) ... 114s Setting up linux-generic (6.19.0-3.3) ... 114s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ... 114s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ... 114s Setting up ubuntu-standard (1.564) ... 114s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ... 114s Setting up linux-virtual (6.19.0-3.3) ... 114s Setting up linux-perf (6.19.0-3.3) ... 114s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ... 114s Processing triggers for debianutils (5.23.2build1) ... 114s Processing triggers for install-info (7.2-5) ... 114s Processing triggers for initramfs-tools (0.150ubuntu7) ... 114s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 118s Processing triggers for libc-bin (2.42-2ubuntu4) ... 118s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ... 118s /etc/kernel/postinst.d/initramfs-tools: 118s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic 122s /etc/kernel/postinst.d/zz-update-grub: 122s Sourcing file `/etc/default/grub' 122s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 122s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 122s Generating grub configuration file ... 122s Found linux image: /boot/vmlinuz-6.19.0-3-generic 122s Found initrd image: /boot/initrd.img-6.19.0-3-generic 122s Found linux image: /boot/vmlinuz-6.18.0-9-generic 122s Found initrd image: /boot/initrd.img-6.18.0-9-generic 122s Warning: os-prober will not be executed to detect other bootable partitions. 122s Systems on them will not be added to the GRUB boot configuration. 122s Check GRUB_DISABLE_OS_PROBER documentation entry. 122s Adding boot menu entry for UEFI Firmware Settings ... 122s done 123s autopkgtest [04:15:53]: upgrading testbed (apt dist-upgrade and autopurge) 123s Reading package lists... 123s Building dependency tree... 123s Reading state information... 124s Calculating upgrade... 124s The following package was automatically installed and is no longer required: 124s libpython3.13 124s Use 'sudo apt autoremove' to remove it. 124s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 124s Solving dependencies... 124s The following packages will be REMOVED: 124s libpython3.13* 124s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 124s After this operation, 7599 kB disk space will be freed. 124s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125273 files and directories currently installed.) 124s Removing libpython3.13:amd64 (3.13.11-1) ... 124s Processing triggers for libc-bin (2.42-2ubuntu4) ... 125s autopkgtest [04:15:55]: rebooting testbed after setup commands that affected boot 153s autopkgtest [04:16:23]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026 155s autopkgtest [04:16:25]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-ioniser 156s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-ioniser 2.30.0+dfsg-2 (dsc) [2361 B] 156s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-ioniser 2.30.0+dfsg-2 (tar) [1088 kB] 156s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-ioniser 2.30.0+dfsg-2 (diff) [3576 B] 157s gpgv: Signature made Mon Jan 13 22:15:21 2025 UTC 157s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 157s gpgv: issuer "crusoe@debian.org" 157s gpgv: Can't check signature: No public key 157s dpkg-source: warning: cannot verify inline signature for ./r-bioc-ioniser_2.30.0+dfsg-2.dsc: no acceptable signature found 157s autopkgtest [04:16:27]: testing package r-bioc-ioniser version 2.30.0+dfsg-2 157s autopkgtest [04:16:27]: build not needed 174s autopkgtest [04:16:44]: test pkg-r-autopkgtest: preparing testbed 174s Reading package lists... 174s Building dependency tree... 174s Reading state information... 174s Solving dependencies... 174s The following NEW packages will be installed: 174s build-essential comerr-dev cpp cpp-15 cpp-15-x86-64-linux-gnu 174s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 174s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 174s fonts-glyphicons-halflings fonts-mathjax g++ g++-15 g++-15-x86-64-linux-gnu 174s g++-x86-64-linux-gnu gcc gcc-15 gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu 174s gfortran gfortran-15 gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu 174s hdf5-helpers icu-devtools javascript-common krb5-multidev libaec-dev libaec0 174s libasan8 libblas-dev libblas3 libblosc1 libboost-dev libboost1.90-dev 174s libbrotli-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 174s libcrypt-dev libcurl4-openssl-dev libdatrie1 libdeflate-dev libdeflate0 174s libevent-2.1-7t64 libfontconfig1 libgcc-15-dev libgfortran-15-dev 174s libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 174s libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgraphite2-3 libgssrpc4t64 174s libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 174s libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhwasan0 libice6 174s libicu-dev libidn2-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 174s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 174s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 174s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 174s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 174s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 174s libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkrb5-dev liblapack-dev 174s liblapack3 libldap-dev liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 174s libncurses-dev libnghttp2-dev libp11-kit-dev libpango-1.0-0 174s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 174s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 174s libpng-dev libpsl-dev libquadmath0 libreadline-dev librtmp-dev libsharpyuv0 174s libsm6 libsnappy1v5 libssh2-1-dev libssl-dev libstdc++-15-dev libsz2 174s libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 174s libtk8.6 libtsan2 libubsan1 libunbound8 libwebp7 libxcb-render0 libxcb-shm0 174s libxft2 libxrender1 libxss1 libxt6t64 libzstd-dev linux-libc-dev nettle-dev 174s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 174s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biobase 174s r-bioc-biocgenerics r-bioc-biocparallel r-bioc-biostrings 174s r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata 174s r-bioc-genomicalignments r-bioc-genomicranges r-bioc-ioniser r-bioc-iranges 174s r-bioc-matrixgenerics r-bioc-pwalign r-bioc-rhdf5 r-bioc-rhdf5filters 174s r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools r-bioc-s4arrays 174s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 174s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 174s r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh r-cran-bit 174s r-cran-bit64 r-cran-bitops r-cran-brio r-cran-bslib r-cran-cachem 174s r-cran-callr r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 174s r-cran-crayon r-cran-curl r-cran-deldir r-cran-desc r-cran-diffobj 174s r-cran-digest r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-farver 174s r-cran-fastmap r-cran-fontawesome r-cran-formatr r-cran-fs 174s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggplot2 174s r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools 174s r-cran-httpuv r-cran-httr r-cran-hwriter r-cran-interp r-cran-isoband 174s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 174s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 174s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 174s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 174s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-png 174s r-cran-praise r-cran-processx r-cran-promises r-cran-ps r-cran-purrr 174s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen 174s r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-s7 r-cran-sass 174s r-cran-scales r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi 174s r-cran-stringr r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr 174s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite 174s r-cran-waldo r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml rpcsvc-proto 174s unzip x11-common xdg-utils zip zlib1g-dev 174s 0 upgraded, 301 newly installed, 0 to remove and 0 not upgraded. 174s Need to get 342 MB of archives. 174s After this operation, 1190 MB of additional disk space will be used. 174s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB] 174s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB] 175s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB] 175s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB] 175s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB] 175s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB] 175s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB] 175s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB] 175s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B] 175s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 175s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 175s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB] 175s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB] 175s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB] 175s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB] 175s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB] 175s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB] 175s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB] 175s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB] 175s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB] 175s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB] 175s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB] 176s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB] 176s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 176s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 176s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB] 176s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB] 176s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB] 176s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 176s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 176s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B] 176s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB] 176s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 176s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB] 176s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB] 176s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB] 176s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB] 176s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 176s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 176s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 176s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB] 176s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB] 176s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB] 177s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB] 177s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B] 177s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B] 177s Get:47 http://ftpmaster.internal/ubuntu resolute/universe amd64 hdf5-helpers amd64 1.14.6+repack-2 [17.3 kB] 177s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB] 177s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B] 177s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 comerr-dev amd64 2.1-1.47.2-3ubuntu2 [45.0 kB] 177s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libgssrpc4t64 amd64 1.22.1-2 [57.9 kB] 177s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5clnt-mit12 amd64 1.22.1-2 [40.2 kB] 177s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libkdb5-10t64 amd64 1.22.1-2 [41.6 kB] 177s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5srv-mit12 amd64 1.22.1-2 [55.0 kB] 177s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 krb5-multidev amd64 1.22.1-2 [126 kB] 177s Get:56 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB] 177s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 177s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB] 177s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.8 kB] 177s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc1 amd64 1.21.5+ds-2 [35.8 kB] 177s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB] 179s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B] 179s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli-dev amd64 1.1.0-2build6 [355 kB] 179s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB] 179s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB] 179s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB] 179s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B] 179s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 179s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB] 179s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-dev amd64 2.3.8-4build1 [121 kB] 179s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libkrb5-dev amd64 1.22.1-2 [11.9 kB] 179s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libldap-dev amd64 2.6.10+dfsg-1ubuntu5 [315 kB] 179s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB] 179s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB] 179s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB] 179s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnghttp2-dev amd64 1.64.0-1.1ubuntu1 [120 kB] 179s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libpsl-dev amd64 0.21.2-1.1build2 [78.7 kB] 179s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5ubuntu1 [9956 B] 179s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5ubuntu1 [342 kB] 179s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10build2 [145 kB] 179s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libunbound8 amd64 1.24.2-1ubuntu1 [462 kB] 179s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-dane0t64 amd64 3.8.10-3ubuntu1 [24.5 kB] 179s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-openssl27t64 amd64 3.8.10-3ubuntu1 [24.8 kB] 179s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libp11-kit-dev amd64 0.25.10-1 [29.3 kB] 179s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6-dev amd64 4.21.0-2 [92.4 kB] 179s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 nettle-dev amd64 3.10.2-1 [1176 kB] 179s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls28-dev amd64 3.8.10-3ubuntu1 [1096 kB] 179s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB] 179s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-3 [69.2 kB] 179s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 libssl-dev amd64 3.5.3-1ubuntu2 [2936 kB] 179s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 libssh2-1-dev amd64 1.11.1-1build1 [288 kB] 179s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB] 179s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 libcurl4-openssl-dev amd64 8.18.0-1ubuntu1 [543 kB] 179s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB] 179s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB] 179s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB] 179s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB] 179s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB] 179s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB] 179s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB] 179s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-cpp-310 amd64 1.14.6+repack-2 [125 kB] 179s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-fortran-310 amd64 1.14.6+repack-2 [106 kB] 179s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB] 179s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-fortran-310 amd64 1.14.6+repack-2 [32.1 kB] 179s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-cpp-310 amd64 1.14.6+repack-2 [11.9 kB] 179s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB] 179s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB] 179s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B] 179s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B] 179s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B] 179s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec-dev amd64 1.1.5-1 [23.5 kB] 179s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-dev amd64 1.14.6+repack-2 [3386 kB] 179s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 179s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB] 179s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB] 180s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 180s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 180s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 180s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB] 180s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 180s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 180s Get:122 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 180s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 180s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 180s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 180s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 180s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 180s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 180s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 180s Get:130 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 180s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB] 180s Get:132 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB] 180s Get:133 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB] 180s Get:134 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB] 180s Get:135 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB] 180s Get:136 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB] 180s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB] 180s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB] 180s Get:139 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB] 180s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB] 180s Get:141 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB] 180s Get:142 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB] 180s Get:143 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB] 180s Get:144 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B] 180s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB] 180s Get:146 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB] 180s Get:147 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB] 180s Get:148 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB] 180s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB] 180s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB] 180s Get:151 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB] 180s Get:152 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB] 180s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 180s Get:154 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB] 180s Get:155 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B] 180s Get:156 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 180s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB] 180s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 180s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 180s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 180s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 180s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB] 181s Get:163 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB] 181s Get:164 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB] 181s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 181s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB] 181s Get:167 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB] 181s Get:168 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB] 181s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 181s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B] 181s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 181s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 181s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 181s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB] 181s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB] 181s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB] 181s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB] 181s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 181s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 181s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB] 181s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 181s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 181s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB] 182s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 182s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 182s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB] 182s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 182s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 182s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 182s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 182s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 182s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 182s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 182s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 182s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 182s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 182s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 182s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 183s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB] 183s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB] 183s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 183s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 183s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 183s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 183s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB] 183s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 184s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 184s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 184s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 184s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 184s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 184s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 184s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5lib amd64 1.28.0+dfsg-3 [97.2 kB] 184s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5filters amd64 1.18.1+dfsg-1 [137 kB] 184s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5 amd64 2.50.2+dfsg-1build1 [822 kB] 184s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 184s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB] 184s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 184s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB] 184s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 184s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 184s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 184s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 184s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB] 184s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB] 184s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 184s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 184s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 184s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 184s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB] 184s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB] 184s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB] 184s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 185s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 185s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-pwalign amd64 1.2.0-3 [757 kB] 185s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hwriter all 1.3.2.1-1 [106 kB] 185s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 185s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jpeg amd64 0.1-10-1 [31.4 kB] 185s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 185s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB] 185s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 185s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB] 185s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB] 185s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB] 185s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-interp amd64 1.1-6-1 [1454 kB] 185s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB] 185s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-latticeextra all 0.6-31-1 [2177 kB] 185s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-shortread amd64 1.64.0-3 [5247 kB] 185s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 185s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 185s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB] 185s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 185s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 185s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB] 185s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB] 186s Get:256 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 186s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB] 186s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit64 amd64 4.6.0-1-4 [491 kB] 186s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ioniser all 2.30.0+dfsg-2 [1161 kB] 186s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB] 186s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 186s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 186s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 186s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB] 186s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 186s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 186s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 186s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 186s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB] 186s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 186s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 186s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB] 186s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB] 186s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 186s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB] 186s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 186s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB] 186s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB] 186s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 186s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB] 186s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB] 186s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 186s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 186s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 186s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 186s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 186s Get:287 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 186s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 186s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB] 186s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB] 186s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB] 186s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB] 186s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB] 186s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 186s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 186s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 186s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 186s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 186s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 186s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB] 187s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB] 187s Preconfiguring packages ... 187s Fetched 342 MB in 12s (27.6 MB/s) 187s Selecting previously unselected package libc-dev-bin. 187s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125269 files and directories currently installed.) 187s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ... 187s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 187s Selecting previously unselected package linux-libc-dev:amd64. 187s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ... 187s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ... 187s Selecting previously unselected package libcrypt-dev:amd64. 187s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ... 187s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ... 187s Selecting previously unselected package rpcsvc-proto. 187s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ... 187s Unpacking rpcsvc-proto (1.4.3-1build1) ... 187s Selecting previously unselected package libc6-dev:amd64. 187s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ... 187s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ... 187s Selecting previously unselected package libisl23:amd64. 187s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ... 187s Unpacking libisl23:amd64 (0.27-1build1) ... 187s Selecting previously unselected package libmpc3:amd64. 187s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ... 187s Unpacking libmpc3:amd64 (1.3.1-2) ... 187s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 187s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 187s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package cpp-15. 188s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ... 188s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package cpp-x86-64-linux-gnu. 188s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 188s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 188s Selecting previously unselected package cpp. 188s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ... 188s Unpacking cpp (4:15.2.0-4ubuntu1) ... 188s Selecting previously unselected package libcc1-0:amd64. 188s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libgomp1:amd64. 188s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libitm1:amd64. 188s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libasan8:amd64. 188s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package liblsan0:amd64. 188s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libtsan2:amd64. 188s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libubsan1:amd64. 188s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libhwasan0:amd64. 188s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libquadmath0:amd64. 188s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ... 188s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ... 188s Selecting previously unselected package libgcc-15-dev:amd64. 188s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ... 188s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package gcc-15-x86-64-linux-gnu. 188s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 188s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package gcc-15. 188s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ... 188s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package gcc-x86-64-linux-gnu. 188s Preparing to unpack .../023-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 188s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 188s Selecting previously unselected package gcc. 188s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ... 188s Unpacking gcc (4:15.2.0-4ubuntu1) ... 188s Selecting previously unselected package libstdc++-15-dev:amd64. 188s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ... 188s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package g++-15-x86-64-linux-gnu. 188s Preparing to unpack .../026-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 188s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package g++-15. 188s Preparing to unpack .../027-g++-15_15.2.0-12ubuntu1_amd64.deb ... 188s Unpacking g++-15 (15.2.0-12ubuntu1) ... 188s Selecting previously unselected package g++-x86-64-linux-gnu. 188s Preparing to unpack .../028-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 188s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 188s Selecting previously unselected package g++. 188s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_amd64.deb ... 188s Unpacking g++ (4:15.2.0-4ubuntu1) ... 188s Selecting previously unselected package build-essential. 188s Preparing to unpack .../030-build-essential_12.12ubuntu2_amd64.deb ... 188s Unpacking build-essential (12.12ubuntu2) ... 188s Selecting previously unselected package dctrl-tools. 188s Preparing to unpack .../031-dctrl-tools_2.24-3build4_amd64.deb ... 188s Unpacking dctrl-tools (2.24-3build4) ... 188s Selecting previously unselected package fonts-dejavu-mono. 188s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8build1_all.deb ... 188s Unpacking fonts-dejavu-mono (2.37-8build1) ... 188s Selecting previously unselected package fonts-dejavu-core. 188s Preparing to unpack .../033-fonts-dejavu-core_2.37-8build1_all.deb ... 188s Unpacking fonts-dejavu-core (2.37-8build1) ... 188s Selecting previously unselected package fontconfig-config. 188s Preparing to unpack .../034-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ... 189s Unpacking fontconfig-config (2.17.1-3ubuntu1) ... 189s Selecting previously unselected package libfontconfig1:amd64. 189s Preparing to unpack .../035-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ... 189s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ... 189s Selecting previously unselected package fontconfig. 189s Preparing to unpack .../036-fontconfig_2.17.1-3ubuntu1_amd64.deb ... 189s Unpacking fontconfig (2.17.1-3ubuntu1) ... 189s Selecting previously unselected package fonts-font-awesome. 189s Preparing to unpack .../037-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ... 189s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ... 189s Selecting previously unselected package fonts-glyphicons-halflings. 189s 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package javascript-common. 189s Preparing to unpack .../048-javascript-common_12+nmu1build1_all.deb ... 189s Unpacking javascript-common (12+nmu1build1) ... 189s Selecting previously unselected package comerr-dev:amd64. 189s Preparing to unpack .../049-comerr-dev_2.1-1.47.2-3ubuntu2_amd64.deb ... 189s Unpacking comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ... 189s Selecting previously unselected package libgssrpc4t64:amd64. 189s Preparing to unpack .../050-libgssrpc4t64_1.22.1-2_amd64.deb ... 189s Unpacking libgssrpc4t64:amd64 (1.22.1-2) ... 189s Selecting previously unselected package libkadm5clnt-mit12:amd64. 189s Preparing to unpack .../051-libkadm5clnt-mit12_1.22.1-2_amd64.deb ... 189s Unpacking libkadm5clnt-mit12:amd64 (1.22.1-2) ... 189s Selecting previously unselected package libkdb5-10t64:amd64. 189s Preparing to unpack .../052-libkdb5-10t64_1.22.1-2_amd64.deb ... 189s Unpacking libkdb5-10t64:amd64 (1.22.1-2) ... 189s Selecting previously unselected package libkadm5srv-mit12:amd64. 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(1.0.8-6build2) ... 190s Selecting previously unselected package libpixman-1-0:amd64. 190s Preparing to unpack .../064-libpixman-1-0_0.46.4-1_amd64.deb ... 190s Unpacking libpixman-1-0:amd64 (0.46.4-1) ... 190s Selecting previously unselected package libxcb-render0:amd64. 190s Preparing to unpack .../065-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ... 190s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ... 190s Selecting previously unselected package libxcb-shm0:amd64. 190s Preparing to unpack .../066-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ... 190s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ... 190s Selecting previously unselected package libxrender1:amd64. 190s Preparing to unpack .../067-libxrender1_1%3a0.9.12-1_amd64.deb ... 190s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 190s Selecting previously unselected package libcairo2:amd64. 190s Preparing to unpack .../068-libcairo2_1.18.4-3_amd64.deb ... 190s Unpacking libcairo2:amd64 (1.18.4-3) ... 190s Selecting previously unselected package libidn2-dev:amd64. 190s Preparing to unpack .../069-libidn2-dev_2.3.8-4build1_amd64.deb ... 190s Unpacking libidn2-dev:amd64 (2.3.8-4build1) ... 190s Selecting previously unselected package libkrb5-dev:amd64. 190s Preparing to unpack .../070-libkrb5-dev_1.22.1-2_amd64.deb ... 190s Unpacking libkrb5-dev:amd64 (1.22.1-2) ... 190s Selecting previously unselected package libldap-dev:amd64. 190s Preparing to unpack .../071-libldap-dev_2.6.10+dfsg-1ubuntu5_amd64.deb ... 190s Unpacking libldap-dev:amd64 (2.6.10+dfsg-1ubuntu5) ... 190s Selecting previously unselected package libpkgconf3:amd64. 190s Preparing to unpack .../072-libpkgconf3_1.8.1-4build1_amd64.deb ... 190s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ... 190s Selecting previously unselected package pkgconf-bin. 190s Preparing to unpack .../073-pkgconf-bin_1.8.1-4build1_amd64.deb ... 190s Unpacking pkgconf-bin (1.8.1-4build1) ... 190s Selecting previously unselected package pkgconf:amd64. 190s Preparing to unpack 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unpack .../079-libevent-2.1-7t64_2.1.12-stable-10build2_amd64.deb ... 190s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10build2) ... 190s Selecting previously unselected package libunbound8:amd64. 190s Preparing to unpack .../080-libunbound8_1.24.2-1ubuntu1_amd64.deb ... 190s Unpacking libunbound8:amd64 (1.24.2-1ubuntu1) ... 190s Selecting previously unselected package libgnutls-dane0t64:amd64. 190s Preparing to unpack .../081-libgnutls-dane0t64_3.8.10-3ubuntu1_amd64.deb ... 190s Unpacking libgnutls-dane0t64:amd64 (3.8.10-3ubuntu1) ... 190s Selecting previously unselected package libgnutls-openssl27t64:amd64. 190s Preparing to unpack .../082-libgnutls-openssl27t64_3.8.10-3ubuntu1_amd64.deb ... 190s Unpacking libgnutls-openssl27t64:amd64 (3.8.10-3ubuntu1) ... 190s Selecting previously unselected package libp11-kit-dev:amd64. 190s Preparing to unpack .../083-libp11-kit-dev_0.25.10-1_amd64.deb ... 190s Unpacking libp11-kit-dev:amd64 (0.25.10-1) ... 190s Selecting previously unselected package libtasn1-6-dev:amd64. 190s Preparing to unpack .../084-libtasn1-6-dev_4.21.0-2_amd64.deb ... 190s Unpacking libtasn1-6-dev:amd64 (4.21.0-2) ... 190s Selecting previously unselected package nettle-dev:amd64. 190s Preparing to unpack .../085-nettle-dev_3.10.2-1_amd64.deb ... 190s Unpacking nettle-dev:amd64 (3.10.2-1) ... 190s Selecting previously unselected package libgnutls28-dev:amd64. 190s Preparing to unpack .../086-libgnutls28-dev_3.8.10-3ubuntu1_amd64.deb ... 190s Unpacking libgnutls28-dev:amd64 (3.8.10-3ubuntu1) ... 190s Selecting previously unselected package zlib1g-dev:amd64. 190s Preparing to unpack .../087-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ... 190s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 190s Selecting previously unselected package librtmp-dev:amd64. 190s Preparing to unpack .../088-librtmp-dev_2.4+20151223.gitfa8646d.1-3_amd64.deb ... 190s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-3) ... 190s Selecting previously unselected package libssl-dev:amd64. 190s Preparing to unpack .../089-libssl-dev_3.5.3-1ubuntu2_amd64.deb ... 190s Unpacking libssl-dev:amd64 (3.5.3-1ubuntu2) ... 190s Selecting previously unselected package libssh2-1-dev:amd64. 190s Preparing to unpack .../090-libssh2-1-dev_1.11.1-1build1_amd64.deb ... 190s Unpacking libssh2-1-dev:amd64 (1.11.1-1build1) ... 190s Selecting previously unselected package libzstd-dev:amd64. 190s Preparing to unpack .../091-libzstd-dev_1.5.7+dfsg-3_amd64.deb ... 190s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-3) ... 190s Selecting previously unselected package libcurl4-openssl-dev:amd64. 190s Preparing to unpack .../092-libcurl4-openssl-dev_8.18.0-1ubuntu1_amd64.deb ... 190s Unpacking libcurl4-openssl-dev:amd64 (8.18.0-1ubuntu1) ... 190s Selecting previously unselected package libdatrie1:amd64. 190s Preparing to unpack .../093-libdatrie1_0.2.14-1_amd64.deb ... 190s Unpacking libdatrie1:amd64 (0.2.14-1) ... 190s Selecting previously unselected package libdeflate0:amd64. 190s Preparing to unpack .../094-libdeflate0_1.23-2build1_amd64.deb ... 190s Unpacking libdeflate0:amd64 (1.23-2build1) ... 190s Selecting previously unselected package libdeflate-dev:amd64. 190s Preparing to unpack .../095-libdeflate-dev_1.23-2build1_amd64.deb ... 190s Unpacking libdeflate-dev:amd64 (1.23-2build1) ... 190s Selecting previously unselected package libgraphite2-3:amd64. 190s Preparing to unpack .../096-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ... 190s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ... 191s Selecting previously unselected package libharfbuzz0b:amd64. 191s Preparing to unpack .../097-libharfbuzz0b_12.3.2-1_amd64.deb ... 191s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ... 191s Selecting previously unselected package libsz2:amd64. 191s Preparing to unpack .../098-libsz2_1.1.5-1_amd64.deb ... 191s Unpacking libsz2:amd64 (1.1.5-1) ... 191s Selecting previously unselected package libhdf5-310:amd64. 191s Preparing to unpack .../099-libhdf5-310_1.14.6+repack-2_amd64.deb ... 191s Unpacking libhdf5-310:amd64 (1.14.6+repack-2) ... 191s Selecting previously unselected package libhdf5-cpp-310:amd64. 191s Preparing to unpack .../100-libhdf5-cpp-310_1.14.6+repack-2_amd64.deb ... 191s Unpacking libhdf5-cpp-310:amd64 (1.14.6+repack-2) ... 191s Selecting previously unselected package libhdf5-fortran-310:amd64. 191s Preparing to unpack .../101-libhdf5-fortran-310_1.14.6+repack-2_amd64.deb ... 191s Unpacking libhdf5-fortran-310:amd64 (1.14.6+repack-2) ... 191s Selecting previously unselected package libhdf5-hl-310:amd64. 191s Preparing to unpack .../102-libhdf5-hl-310_1.14.6+repack-2_amd64.deb ... 191s Unpacking libhdf5-hl-310:amd64 (1.14.6+repack-2) ... 191s Selecting previously unselected package libhdf5-hl-fortran-310:amd64. 191s Preparing to unpack .../103-libhdf5-hl-fortran-310_1.14.6+repack-2_amd64.deb ... 191s Unpacking libhdf5-hl-fortran-310:amd64 (1.14.6+repack-2) ... 191s Selecting previously unselected package libhdf5-hl-cpp-310:amd64. 191s Preparing to unpack .../104-libhdf5-hl-cpp-310_1.14.6+repack-2_amd64.deb ... 191s Unpacking libhdf5-hl-cpp-310:amd64 (1.14.6+repack-2) ... 191s Selecting previously unselected package libjpeg-turbo8:amd64. 191s Preparing to unpack .../105-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ... 191s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ... 191s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 191s Preparing to unpack .../106-libjpeg-turbo8-dev_2.1.5-4ubuntu3_amd64.deb ... 191s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ... 191s Selecting previously unselected package libjpeg8:amd64. 191s Preparing to unpack .../107-libjpeg8_8c-2ubuntu12_amd64.deb ... 191s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ... 191s Selecting previously unselected package libjpeg8-dev:amd64. 191s Preparing to unpack .../108-libjpeg8-dev_8c-2ubuntu12_amd64.deb ... 191s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu12) ... 191s Selecting previously unselected package libjpeg-dev:amd64. 191s Preparing to unpack .../109-libjpeg-dev_8c-2ubuntu12_amd64.deb ... 191s Unpacking libjpeg-dev:amd64 (8c-2ubuntu12) ... 191s Selecting previously unselected package libaec-dev:amd64. 191s Preparing to unpack .../110-libaec-dev_1.1.5-1_amd64.deb ... 191s Unpacking libaec-dev:amd64 (1.1.5-1) ... 191s Selecting previously unselected package libhdf5-dev. 191s Preparing to unpack .../111-libhdf5-dev_1.14.6+repack-2_amd64.deb ... 191s Unpacking libhdf5-dev (1.14.6+repack-2) ... 191s Selecting previously unselected package x11-common. 191s Preparing to unpack .../112-x11-common_1%3a7.7+24ubuntu1_all.deb ... 191s Unpacking x11-common (1:7.7+24ubuntu1) ... 191s Selecting previously unselected package libice6:amd64. 191s Preparing to unpack .../113-libice6_2%3a1.1.1-1build1_amd64.deb ... 191s Unpacking libice6:amd64 (2:1.1.1-1build1) ... 191s Selecting previously unselected package libicu-dev:amd64. 191s Preparing to unpack .../114-libicu-dev_78.2-1ubuntu1_amd64.deb ... 191s Unpacking libicu-dev:amd64 (78.2-1ubuntu1) ... 191s Selecting previously unselected package libjs-bootstrap. 191s Preparing to unpack .../115-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 191s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 191s Selecting previously unselected package libjs-popper.js. 191s Preparing to unpack .../116-libjs-popper.js_1.16.1+ds-6build1_all.deb ... 191s Unpacking libjs-popper.js (1.16.1+ds-6build1) ... 191s Selecting previously unselected package libjs-bootstrap4. 191s Preparing to unpack .../117-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 191s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 191s Selecting previously unselected package libjs-d3. 191s Preparing to unpack .../118-libjs-d3_3.5.17-4build1_all.deb ... 191s Unpacking libjs-d3 (3.5.17-4build1) ... 191s Selecting previously unselected package libjs-es5-shim. 191s Preparing to unpack .../119-libjs-es5-shim_4.6.7-2_all.deb ... 191s Unpacking libjs-es5-shim 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libjs-microplugin.js (0.0.3+dfsg-2) ... 191s Selecting previously unselected package libjs-jquery-selectize.js. 191s Preparing to unpack .../125-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 191s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 191s Selecting previously unselected package libjs-jquery-ui. 191s Preparing to unpack .../126-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ... 191s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ... 191s Selecting previously unselected package libjs-json. 191s Preparing to unpack .../127-libjs-json_0~20221030+~1.0.8-1build1_all.deb ... 191s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ... 191s Selecting previously unselected package libjs-prettify. 191s Preparing to unpack .../128-libjs-prettify_2015.12.04+dfsg-3_all.deb ... 191s Unpacking libjs-prettify (2015.12.04+dfsg-3) ... 191s Selecting previously unselected package liblapack3:amd64. 191s Preparing to unpack .../129-liblapack3_3.12.1-7ubuntu1_amd64.deb ... 191s 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previously unselected package libthai0:amd64. 191s Preparing to unpack .../135-libthai0_0.1.30-1_amd64.deb ... 191s Unpacking libthai0:amd64 (0.1.30-1) ... 191s Selecting previously unselected package libpango-1.0-0:amd64. 191s Preparing to unpack .../136-libpango-1.0-0_1.57.0-1_amd64.deb ... 191s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ... 192s Selecting previously unselected package libpangoft2-1.0-0:amd64. 192s Preparing to unpack .../137-libpangoft2-1.0-0_1.57.0-1_amd64.deb ... 192s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ... 192s Selecting previously unselected package libpangocairo-1.0-0:amd64. 192s Preparing to unpack .../138-libpangocairo-1.0-0_1.57.0-1_amd64.deb ... 192s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ... 192s Selecting previously unselected package libpaper2:amd64. 192s Preparing to unpack .../139-libpaper2_2.2.5-0.3build1_amd64.deb ... 192s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ... 192s Selecting previously unselected package libpaper-utils. 192s Preparing to unpack .../140-libpaper-utils_2.2.5-0.3build1_amd64.deb ... 192s Unpacking libpaper-utils (2.2.5-0.3build1) ... 192s Selecting previously unselected package libpcre2-16-0:amd64. 192s Preparing to unpack .../141-libpcre2-16-0_10.46-1_amd64.deb ... 192s Unpacking libpcre2-16-0:amd64 (10.46-1) ... 192s Selecting previously unselected package libpcre2-32-0:amd64. 192s Preparing to unpack .../142-libpcre2-32-0_10.46-1_amd64.deb ... 192s Unpacking libpcre2-32-0:amd64 (10.46-1) ... 192s Selecting previously unselected package libpcre2-posix3:amd64. 192s Preparing to unpack .../143-libpcre2-posix3_10.46-1_amd64.deb ... 192s Unpacking libpcre2-posix3:amd64 (10.46-1) ... 192s Selecting previously unselected package libpcre2-dev:amd64. 192s Preparing to unpack .../144-libpcre2-dev_10.46-1_amd64.deb ... 192s Unpacking libpcre2-dev:amd64 (10.46-1) ... 192s Selecting previously unselected package libpng-dev:amd64. 192s Preparing to unpack .../145-libpng-dev_1.6.54-1_amd64.deb ... 192s Unpacking libpng-dev:amd64 (1.6.54-1) ... 192s Selecting previously unselected package libreadline-dev:amd64. 192s Preparing to unpack .../146-libreadline-dev_8.3-3_amd64.deb ... 192s Unpacking libreadline-dev:amd64 (8.3-3) ... 192s Selecting previously unselected package libsharpyuv0:amd64. 192s Preparing to unpack .../147-libsharpyuv0_1.5.0-0.1build1_amd64.deb ... 192s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ... 192s Selecting previously unselected package libsm6:amd64. 192s Preparing to unpack .../148-libsm6_2%3a1.2.6-1build1_amd64.deb ... 192s Unpacking libsm6:amd64 (2:1.2.6-1build1) ... 192s Selecting previously unselected package libtcl8.6:amd64. 192s Preparing to unpack .../149-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ... 192s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ... 192s Selecting previously unselected package libjbig0:amd64. 192s Preparing to unpack .../150-libjbig0_2.1-6.1ubuntu3_amd64.deb ... 192s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ... 192s Selecting previously unselected package libwebp7:amd64. 192s Preparing to unpack .../151-libwebp7_1.5.0-0.1build1_amd64.deb ... 192s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ... 192s Selecting previously unselected package libtiff6:amd64. 192s Preparing to unpack .../152-libtiff6_4.7.0-3ubuntu3_amd64.deb ... 192s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ... 192s Selecting previously unselected package libxft2:amd64. 192s Preparing to unpack .../153-libxft2_2.3.6-1build2_amd64.deb ... 192s Unpacking libxft2:amd64 (2.3.6-1build2) ... 192s Selecting previously unselected package libxss1:amd64. 192s Preparing to unpack .../154-libxss1_1%3a1.2.3-1build4_amd64.deb ... 192s Unpacking libxss1:amd64 (1:1.2.3-1build4) ... 192s Selecting previously unselected package libtk8.6:amd64. 192s Preparing to unpack .../155-libtk8.6_8.6.17-1_amd64.deb ... 192s Unpacking libtk8.6:amd64 (8.6.17-1) ... 192s Selecting previously unselected package libxt6t64:amd64. 192s Preparing to unpack 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192s Selecting previously unselected package zip. 192s Preparing to unpack .../162-zip_3.0-15ubuntu3_amd64.deb ... 192s Unpacking zip (3.0-15ubuntu3) ... 192s Selecting previously unselected package unzip. 192s Preparing to unpack .../163-unzip_6.0-29ubuntu1_amd64.deb ... 192s Unpacking unzip (6.0-29ubuntu1) ... 192s Selecting previously unselected package xdg-utils. 192s Preparing to unpack .../164-xdg-utils_1.2.1-2ubuntu2_all.deb ... 192s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 192s Selecting previously unselected package r-base-core. 192s Preparing to unpack .../165-r-base-core_4.5.2-1ubuntu2_amd64.deb ... 192s Unpacking r-base-core (4.5.2-1ubuntu2) ... 193s Selecting previously unselected package liblzma-dev:amd64. 193s Preparing to unpack .../166-liblzma-dev_5.8.2-2_amd64.deb ... 193s Unpacking liblzma-dev:amd64 (5.8.2-2) ... 193s Selecting previously unselected package libtirpc-dev:amd64. 193s Preparing to unpack .../167-libtirpc-dev_1.3.6+ds-1_amd64.deb ... 193s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ... 193s Selecting previously unselected package r-base-dev. 193s Preparing to unpack .../168-r-base-dev_4.5.2-1ubuntu2_all.deb ... 193s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 193s Selecting previously unselected package pkg-r-autopkgtest. 193s Preparing to unpack .../169-pkg-r-autopkgtest_20250812_all.deb ... 193s Unpacking pkg-r-autopkgtest (20250812) ... 193s Selecting previously unselected package r-bioc-biocgenerics. 193s Preparing to unpack .../170-r-bioc-biocgenerics_0.52.0-2_all.deb ... 193s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 193s Selecting previously unselected package r-bioc-biobase. 193s Preparing to unpack .../171-r-bioc-biobase_2.66.0-2_amd64.deb ... 193s Unpacking r-bioc-biobase (2.66.0-2) ... 193s Selecting previously unselected package r-cran-formatr. 193s Preparing to unpack .../172-r-cran-formatr_1.14-2_all.deb ... 193s Unpacking r-cran-formatr (1.14-2) ... 193s Selecting previously unselected package r-cran-lambda.r. 193s Preparing to unpack .../173-r-cran-lambda.r_1.2.4-2build2_all.deb ... 193s Unpacking r-cran-lambda.r (1.2.4-2build2) ... 193s Selecting previously unselected package r-cran-futile.options. 193s Preparing to unpack .../174-r-cran-futile.options_1.0.1-3build2_all.deb ... 193s Unpacking r-cran-futile.options (1.0.1-3build2) ... 193s Selecting previously unselected package r-cran-futile.logger. 193s Preparing to unpack .../175-r-cran-futile.logger_1.4.3-4build2_all.deb ... 193s Unpacking r-cran-futile.logger (1.4.3-4build2) ... 193s Selecting previously unselected package r-cran-snow. 193s Preparing to unpack .../176-r-cran-snow_1%3a0.4.4-2build1_all.deb ... 193s Unpacking r-cran-snow (1:0.4.4-2build1) ... 193s Selecting previously unselected package r-cran-codetools. 193s Preparing to unpack .../177-r-cran-codetools_0.2-20-1build1_all.deb ... 193s Unpacking r-cran-codetools (0.2-20-1build1) ... 193s Selecting previously unselected package r-cran-bh. 193s Preparing to unpack .../178-r-cran-bh_1.84.0-1_all.deb ... 193s Unpacking r-cran-bh (1.84.0-1) ... 193s Selecting previously unselected package r-cran-cpp11. 193s Preparing to unpack .../179-r-cran-cpp11_0.5.3-1_all.deb ... 193s Unpacking r-cran-cpp11 (0.5.3-1) ... 193s Selecting previously unselected package r-bioc-biocparallel. 193s Preparing to unpack .../180-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 193s Unpacking r-bioc-biocparallel (1.40.0-2) ... 193s Selecting previously unselected package r-bioc-s4vectors. 193s Preparing to unpack .../181-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 193s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 193s Selecting previously unselected package r-bioc-iranges. 193s Preparing to unpack .../182-r-bioc-iranges_2.40.1-3_amd64.deb ... 193s Unpacking r-bioc-iranges (2.40.1-3) ... 193s Selecting previously unselected package r-bioc-zlibbioc. 193s Preparing to unpack .../183-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 193s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 193s Selecting previously unselected package r-bioc-xvector. 193s Preparing to unpack .../184-r-bioc-xvector_0.46.0-2_amd64.deb ... 193s Unpacking r-bioc-xvector (0.46.0-2) ... 193s Selecting previously unselected package r-cran-curl. 193s Preparing to unpack .../185-r-cran-curl_7.0.0+dfsg-1_amd64.deb ... 193s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 193s Selecting previously unselected package r-cran-jsonlite. 193s Preparing to unpack .../186-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 193s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 193s Selecting previously unselected package r-cran-mime. 193s Preparing to unpack .../187-r-cran-mime_0.12-2_amd64.deb ... 193s Unpacking r-cran-mime (0.12-2) ... 193s Selecting previously unselected package r-cran-sys. 193s Preparing to unpack .../188-r-cran-sys_3.4.3-1_amd64.deb ... 193s Unpacking r-cran-sys (3.4.3-1) ... 193s Selecting previously unselected package r-cran-askpass. 193s Preparing to unpack .../189-r-cran-askpass_1.2.1-1_amd64.deb ... 193s Unpacking r-cran-askpass (1.2.1-1) ... 193s Selecting previously unselected package r-cran-openssl. 193s Preparing to unpack .../190-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 193s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 193s Selecting previously unselected package r-cran-r6. 193s Preparing to unpack .../191-r-cran-r6_2.6.1-1_all.deb ... 193s Unpacking r-cran-r6 (2.6.1-1) ... 193s Selecting previously unselected package r-cran-httr. 193s Preparing to unpack .../192-r-cran-httr_1.4.7+dfsg-1_all.deb ... 193s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 193s Selecting previously unselected package r-bioc-ucsc.utils. 193s Preparing to unpack .../193-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 193s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 193s Selecting previously unselected package r-bioc-genomeinfodbdata. 193s Preparing to unpack .../194-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 193s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 193s Selecting previously unselected package r-bioc-genomeinfodb. 193s Preparing to unpack .../195-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 193s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 193s Selecting previously unselected package r-cran-crayon. 193s Preparing to unpack .../196-r-cran-crayon_1.5.3-1_all.deb ... 193s Unpacking r-cran-crayon (1.5.3-1) ... 193s Selecting previously unselected package r-bioc-biostrings. 193s Preparing to unpack .../197-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 193s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 193s Selecting previously unselected package r-cran-lattice. 193s Preparing to unpack .../198-r-cran-lattice_0.22-7-1_amd64.deb ... 193s Unpacking r-cran-lattice (0.22-7-1) ... 193s Selecting previously unselected package r-cran-matrix. 193s Preparing to unpack .../199-r-cran-matrix_1.7-4-1_amd64.deb ... 193s Unpacking r-cran-matrix (1.7-4-1) ... 193s Selecting previously unselected package r-cran-matrixstats. 193s Preparing to unpack .../200-r-cran-matrixstats_1.5.0-1_amd64.deb ... 193s Unpacking r-cran-matrixstats (1.5.0-1) ... 193s Selecting previously unselected package r-bioc-matrixgenerics. 193s Preparing to unpack .../201-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 193s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 193s Selecting previously unselected package r-cran-abind. 193s Preparing to unpack .../202-r-cran-abind_1.4-8-1build1_all.deb ... 193s Unpacking r-cran-abind (1.4-8-1build1) ... 193s Selecting previously unselected package r-bioc-s4arrays. 193s Preparing to unpack .../203-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 193s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 193s Selecting previously unselected package r-bioc-sparsearray. 193s Preparing to unpack .../204-r-bioc-sparsearray_1.6.2+dfsg-2_amd64.deb ... 193s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 193s Selecting previously unselected package r-bioc-delayedarray. 193s Preparing to unpack .../205-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 193s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 193s Selecting previously unselected package r-bioc-genomicranges. 193s Preparing to unpack .../206-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 193s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 193s Selecting previously unselected package r-bioc-summarizedexperiment. 193s Preparing to unpack .../207-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 193s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 193s Selecting previously unselected package r-cran-bitops. 193s Preparing to unpack .../208-r-cran-bitops_1.0-9-1_amd64.deb ... 193s Unpacking r-cran-bitops (1.0-9-1) ... 193s Selecting previously unselected package r-bioc-rhtslib. 193s Preparing to unpack .../209-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 193s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 194s Selecting previously unselected package r-bioc-rsamtools. 194s Preparing to unpack .../210-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 194s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 194s Selecting previously unselected package r-bioc-genomicalignments. 194s Preparing to unpack .../211-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 194s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 194s Selecting previously unselected package r-bioc-rhdf5lib. 194s Preparing to unpack .../212-r-bioc-rhdf5lib_1.28.0+dfsg-3_amd64.deb ... 194s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-3) ... 194s Selecting previously unselected package r-bioc-rhdf5filters. 194s Preparing to unpack .../213-r-bioc-rhdf5filters_1.18.1+dfsg-1_amd64.deb ... 194s Unpacking r-bioc-rhdf5filters (1.18.1+dfsg-1) ... 194s Selecting previously unselected package r-bioc-rhdf5. 194s Preparing to unpack .../214-r-bioc-rhdf5_2.50.2+dfsg-1build1_amd64.deb ... 194s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 194s Selecting previously unselected package r-cran-cli. 194s Preparing to unpack .../215-r-cran-cli_3.6.4-1_amd64.deb ... 194s Unpacking r-cran-cli (3.6.4-1) ... 194s Selecting previously unselected package r-cran-generics. 194s Preparing to unpack .../216-r-cran-generics_0.1.4-1_all.deb ... 194s Unpacking r-cran-generics (0.1.4-1) ... 194s Selecting previously unselected package r-cran-glue. 194s Preparing to unpack .../217-r-cran-glue_1.8.0-1_amd64.deb ... 194s Unpacking r-cran-glue (1.8.0-1) ... 194s Selecting previously unselected package r-cran-rlang. 194s Preparing to unpack .../218-r-cran-rlang_1.1.5-3_amd64.deb ... 194s Unpacking r-cran-rlang (1.1.5-3) ... 194s Selecting previously unselected package r-cran-lifecycle. 194s Preparing to unpack .../219-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 194s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 194s Selecting previously unselected package r-cran-magrittr. 194s Preparing to unpack .../220-r-cran-magrittr_2.0.3-1_amd64.deb ... 194s Unpacking r-cran-magrittr (2.0.3-1) ... 194s Selecting previously unselected package r-cran-utf8. 194s Preparing to unpack .../221-r-cran-utf8_1.2.4-1_amd64.deb ... 194s Unpacking r-cran-utf8 (1.2.4-1) ... 194s Selecting previously unselected package r-cran-vctrs. 194s Preparing to unpack .../222-r-cran-vctrs_0.6.5-1_amd64.deb ... 194s Unpacking r-cran-vctrs (0.6.5-1) ... 194s Selecting previously unselected package r-cran-pillar. 194s Preparing to unpack .../223-r-cran-pillar_1.11.1+dfsg-1_all.deb ... 194s Unpacking r-cran-pillar (1.11.1+dfsg-1) ... 194s Selecting previously unselected package r-cran-fansi. 194s Preparing to unpack .../224-r-cran-fansi_1.0.6-2_amd64.deb ... 194s Unpacking r-cran-fansi (1.0.6-2) ... 194s Selecting previously unselected package r-cran-pkgconfig. 194s Preparing to unpack .../225-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 194s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 194s Selecting previously unselected package r-cran-tibble. 194s Preparing to unpack .../226-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ... 194s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 194s Selecting previously unselected package r-cran-withr. 194s Preparing to unpack .../227-r-cran-withr_3.0.2+dfsg-1_all.deb ... 194s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 194s Selecting previously unselected package r-cran-tidyselect. 194s Preparing to unpack .../228-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 194s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 194s Selecting previously unselected package r-cran-dplyr. 194s Preparing to unpack .../229-r-cran-dplyr_1.1.4-4_amd64.deb ... 194s Unpacking r-cran-dplyr (1.1.4-4) ... 194s Selecting previously unselected package r-cran-purrr. 194s Preparing to unpack .../230-r-cran-purrr_1.0.4-1_amd64.deb ... 194s Unpacking r-cran-purrr (1.0.4-1) ... 194s Selecting previously unselected package r-cran-stringi. 194s Preparing to unpack .../231-r-cran-stringi_1.8.4-1build2_amd64.deb ... 194s Unpacking r-cran-stringi (1.8.4-1build2) ... 194s Selecting previously unselected package r-cran-stringr. 194s Preparing to unpack .../232-r-cran-stringr_1.5.1-1_all.deb ... 194s Unpacking r-cran-stringr (1.5.1-1) ... 194s Selecting previously unselected package r-cran-tidyr. 194s Preparing to unpack .../233-r-cran-tidyr_1.3.1-1_amd64.deb ... 194s Unpacking r-cran-tidyr (1.3.1-1) ... 194s Selecting previously unselected package r-bioc-pwalign. 194s Preparing to unpack .../234-r-bioc-pwalign_1.2.0-3_amd64.deb ... 194s Unpacking r-bioc-pwalign (1.2.0-3) ... 194s Selecting previously unselected package r-cran-hwriter. 194s Preparing to unpack .../235-r-cran-hwriter_1.3.2.1-1_all.deb ... 194s Unpacking r-cran-hwriter (1.3.2.1-1) ... 194s Selecting previously unselected package r-cran-png. 194s Preparing to unpack .../236-r-cran-png_0.1-8-1build2_amd64.deb ... 194s Unpacking r-cran-png (0.1-8-1build2) ... 194s Selecting previously unselected package r-cran-jpeg. 194s Preparing to unpack .../237-r-cran-jpeg_0.1-10-1_amd64.deb ... 194s Unpacking r-cran-jpeg (0.1-10-1) ... 194s Selecting previously unselected package r-cran-rcolorbrewer. 194s Preparing to unpack .../238-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 194s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 194s Selecting previously unselected package r-cran-littler. 194s Preparing to unpack .../239-r-cran-littler_0.3.22-1_amd64.deb ... 194s Unpacking r-cran-littler (0.3.22-1) ... 194s Selecting previously unselected package r-cran-pkgkitten. 194s Preparing to unpack .../240-r-cran-pkgkitten_0.2.4-1_all.deb ... 194s Unpacking r-cran-pkgkitten (0.2.4-1) ... 194s Selecting previously unselected package r-cran-rcpp. 194s Preparing to unpack .../241-r-cran-rcpp_1.1.0-1_amd64.deb ... 194s Unpacking r-cran-rcpp (1.1.0-1) ... 194s Selecting previously unselected package r-cran-deldir. 194s Preparing to unpack .../242-r-cran-deldir_2.0-4-1build1_amd64.deb ... 194s Unpacking r-cran-deldir (2.0-4-1build1) ... 194s Selecting previously unselected package r-cran-rcppeigen. 194s Preparing to unpack .../243-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ... 194s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 194s Selecting previously unselected package r-cran-interp. 194s Preparing to unpack .../244-r-cran-interp_1.1-6-1_amd64.deb ... 194s Unpacking r-cran-interp (1.1-6-1) ... 194s Selecting previously unselected package r-cran-mass. 194s Preparing to unpack .../245-r-cran-mass_7.3-65-1_amd64.deb ... 194s Unpacking r-cran-mass (7.3-65-1) ... 194s Selecting previously unselected package r-cran-latticeextra. 194s Preparing to unpack .../246-r-cran-latticeextra_0.6-31-1_all.deb ... 194s Unpacking r-cran-latticeextra (0.6-31-1) ... 194s Selecting previously unselected package r-bioc-shortread. 194s Preparing to unpack .../247-r-bioc-shortread_1.64.0-3_amd64.deb ... 194s Unpacking r-bioc-shortread (1.64.0-3) ... 194s Selecting previously unselected package r-cran-gtable. 194s Preparing to unpack .../248-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 194s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 194s Selecting previously unselected package r-cran-isoband. 194s Preparing to unpack .../249-r-cran-isoband_0.2.7-1_amd64.deb ... 194s Unpacking r-cran-isoband (0.2.7-1) ... 194s Selecting previously unselected package r-cran-s7. 194s Preparing to unpack .../250-r-cran-s7_0.2.0-1_amd64.deb ... 194s Unpacking r-cran-s7 (0.2.0-1) ... 194s Selecting previously unselected package r-cran-farver. 194s Preparing to unpack .../251-r-cran-farver_2.1.2-1_amd64.deb ... 194s Unpacking r-cran-farver (2.1.2-1) ... 194s Selecting previously unselected package r-cran-labeling. 194s Preparing to unpack .../252-r-cran-labeling_0.4.3-1_all.deb ... 194s Unpacking r-cran-labeling (0.4.3-1) ... 194s Selecting previously unselected package r-cran-viridislite. 194s Preparing to unpack .../253-r-cran-viridislite_0.4.3-1_all.deb ... 194s Unpacking r-cran-viridislite (0.4.3-1) ... 194s Selecting previously unselected package r-cran-scales. 194s Preparing to unpack .../254-r-cran-scales_1.4.0-1_all.deb ... 194s Unpacking r-cran-scales (1.4.0-1) ... 194s Selecting previously unselected package r-cran-ggplot2. 194s Preparing to unpack .../255-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 194s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 194s Selecting previously unselected package r-cran-bit. 195s Preparing to unpack .../256-r-cran-bit_4.6.0+dfsg-1_amd64.deb ... 195s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 195s Selecting previously unselected package r-cran-bit64. 195s Preparing to unpack .../257-r-cran-bit64_4.6.0-1-4_amd64.deb ... 195s Unpacking r-cran-bit64 (4.6.0-1-4) ... 195s Selecting previously unselected package r-bioc-ioniser. 195s Preparing to unpack .../258-r-bioc-ioniser_2.30.0+dfsg-2_all.deb ... 195s Unpacking r-bioc-ioniser (2.30.0+dfsg-2) ... 195s Selecting previously unselected package r-cran-base64enc. 195s Preparing to unpack .../259-r-cran-base64enc_0.1-3-3build1_amd64.deb ... 195s Unpacking r-cran-base64enc (0.1-3-3build1) ... 195s Selecting previously unselected package r-cran-brio. 195s Preparing to unpack .../260-r-cran-brio_1.1.5-1_amd64.deb ... 195s Unpacking r-cran-brio (1.1.5-1) ... 195s Selecting previously unselected package r-cran-fastmap. 195s Preparing to unpack .../261-r-cran-fastmap_1.2.0-1_amd64.deb ... 195s Unpacking r-cran-fastmap (1.2.0-1) ... 195s Selecting previously unselected package r-cran-cachem. 195s Preparing to unpack .../262-r-cran-cachem_1.1.0-1_amd64.deb ... 195s Unpacking r-cran-cachem (1.1.0-1) ... 195s Selecting previously unselected package r-cran-digest. 195s Preparing to unpack .../263-r-cran-digest_0.6.39-1_amd64.deb ... 195s Unpacking r-cran-digest (0.6.39-1) ... 195s Selecting previously unselected package r-cran-htmltools. 195s Preparing to unpack .../264-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 195s Unpacking r-cran-htmltools (0.5.8.1-1) ... 195s Selecting previously unselected package r-cran-jquerylib. 195s Preparing to unpack .../265-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 195s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 195s Selecting previously unselected package r-cran-memoise. 195s Preparing to unpack .../266-r-cran-memoise_2.0.1-1build1_all.deb ... 195s Unpacking r-cran-memoise (2.0.1-1build1) ... 195s Selecting previously unselected package r-cran-fs. 195s Preparing to unpack .../267-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 195s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 195s Selecting previously unselected package r-cran-rappdirs. 195s Preparing to unpack .../268-r-cran-rappdirs_0.3.3-1build1_amd64.deb ... 195s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 195s Selecting previously unselected package r-cran-sass. 195s Preparing to unpack .../269-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 195s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 195s Selecting previously unselected package r-cran-bslib. 195s Preparing to unpack .../270-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 195s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 195s Selecting previously unselected package r-cran-ps. 195s Preparing to unpack .../271-r-cran-ps_1.9.0-1_amd64.deb ... 195s Unpacking r-cran-ps (1.9.0-1) ... 195s Selecting previously unselected package r-cran-processx. 195s Preparing to unpack .../272-r-cran-processx_3.8.6-1_amd64.deb ... 195s Unpacking r-cran-processx (3.8.6-1) ... 195s Selecting previously unselected package r-cran-callr. 195s Preparing to unpack .../273-r-cran-callr_3.7.6-1_all.deb ... 195s Unpacking r-cran-callr (3.7.6-1) ... 195s Selecting previously unselected package r-cran-commonmark. 195s Preparing to unpack .../274-r-cran-commonmark_1.9.5-1_amd64.deb ... 195s Unpacking r-cran-commonmark (1.9.5-1) ... 195s Selecting previously unselected package r-cran-desc. 195s Preparing to unpack .../275-r-cran-desc_1.4.3-1_all.deb ... 195s Unpacking r-cran-desc (1.4.3-1) ... 195s Selecting previously unselected package r-cran-diffobj. 195s Preparing to unpack .../276-r-cran-diffobj_0.3.5-1build1_amd64.deb ... 195s Unpacking r-cran-diffobj (0.3.5-1build1) ... 195s Selecting previously unselected package r-cran-evaluate. 195s Preparing to unpack .../277-r-cran-evaluate_1.0.5-1_all.deb ... 195s Unpacking r-cran-evaluate (1.0.5-1) ... 195s Selecting previously unselected package r-cran-fontawesome. 195s Preparing to unpack .../278-r-cran-fontawesome_0.5.3-1_all.deb ... 195s Unpacking r-cran-fontawesome (0.5.3-1) ... 195s Selecting previously unselected package r-cran-gridextra. 195s Preparing to unpack .../279-r-cran-gridextra_2.3-3build2_all.deb ... 195s Unpacking r-cran-gridextra (2.3-3build2) ... 195s Selecting previously unselected package r-cran-xfun. 195s Preparing to unpack .../280-r-cran-xfun_0.55+dfsg-1_amd64.deb ... 195s Unpacking r-cran-xfun (0.55+dfsg-1) ... 195s Selecting previously unselected package r-cran-highr. 195s Preparing to unpack .../281-r-cran-highr_0.11+dfsg-1_all.deb ... 195s Unpacking r-cran-highr (0.11+dfsg-1) ... 195s Selecting previously unselected package r-cran-later. 195s Preparing to unpack .../282-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 195s Unpacking r-cran-later (1.4.1+dfsg-1) ... 195s Selecting previously unselected package r-cran-promises. 195s Preparing to unpack .../283-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 195s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 195s Selecting previously unselected package r-cran-httpuv. 195s Preparing to unpack .../284-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 195s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 195s Selecting previously unselected package r-cran-yaml. 195s Preparing to unpack .../285-r-cran-yaml_2.3.10-1_amd64.deb ... 195s Unpacking r-cran-yaml (2.3.10-1) ... 195s Selecting previously unselected package libjs-mathjax. 195s Preparing to unpack .../286-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 195s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 195s Selecting previously unselected package r-cran-knitr. 195s Preparing to unpack .../287-r-cran-knitr_1.51+dfsg-1_all.deb ... 195s Unpacking r-cran-knitr (1.51+dfsg-1) ... 195s Selecting previously unselected package r-cran-pkgbuild. 195s Preparing to unpack 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Selecting previously unselected package r-cran-xtable. 195s Preparing to unpack .../294-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 195s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 195s Selecting previously unselected package r-cran-sourcetools. 195s Preparing to unpack .../295-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 195s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 195s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 195s Preparing to unpack .../296-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 195s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 195s Selecting previously unselected package r-cran-shiny. 195s Preparing to unpack .../297-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 195s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 196s Selecting previously unselected package r-cran-rmarkdown. 196s Preparing to unpack .../298-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 196s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 196s Selecting previously unselected package r-cran-waldo. 196s Preparing to unpack .../299-r-cran-waldo_0.6.2-1_all.deb ... 196s Unpacking r-cran-waldo (0.6.2-1) ... 196s Selecting previously unselected package r-cran-testthat. 196s Preparing to unpack .../300-r-cran-testthat_3.2.3-1_amd64.deb ... 196s Unpacking r-cran-testthat (3.2.3-1) ... 196s Setting up libjs-json (0~20221030+~1.0.8-1build1) ... 196s Setting up javascript-common (12+nmu1build1) ... 196s Setting up libgraphite2-3:amd64 (1.3.14-11ubuntu1) ... 196s Setting up libgnutls-openssl27t64:amd64 (3.8.10-3ubuntu1) ... 196s Setting up libpixman-1-0:amd64 (0.46.4-1) ... 196s Setting up libsharpyuv0:amd64 (1.5.0-0.1build1) ... 196s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ... 196s Setting up libzstd-dev:amd64 (1.5.7+dfsg-3) ... 196s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu2) ... 196s Setting up hdf5-helpers (1.14.6+repack-2) ... 196s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ... 196s Setting up libxrender1:amd64 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up libpsl-dev:amd64 (0.21.2-1.1build2) ... 196s Setting up libsnappy1v5:amd64 (1.2.2-2) ... 196s Setting up libjs-es5-shim (4.6.7-2) ... 196s Setting up zip (3.0-15ubuntu3) ... 196s Setting up libpcre2-32-0:amd64 (10.46-1) ... 196s Setting up libblas3:amd64 (3.12.1-7ubuntu1) ... 196s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 196s Setting up libunbound8:amd64 (1.24.2-1ubuntu1) ... 196s Setting up libtirpc-dev:amd64 (1.3.6+ds-1) ... 196s Setting up libpkgconf3:amd64 (1.8.1-4build1) ... 196s Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 196s Setting up rpcsvc-proto (1.4.3-1build1) ... 196s Setting up libgnutls-dane0t64:amd64 (3.8.10-3ubuntu1) ... 196s Setting up libgssrpc4t64:amd64 (1.22.1-2) ... 196s Setting up libldap-dev:amd64 (2.6.10+dfsg-1ubuntu5) ... 196s Setting up libquadmath0:amd64 (16-20260208-1ubuntu1) ... 196s Setting up libjs-d3 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(0.9.0+dfsg-3build1) ... 198s Setting up r-cran-tidyr (1.3.1-1) ... 198s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 198s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 198s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 198s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 198s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 198s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 198s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 198s Setting up r-bioc-pwalign (1.2.0-3) ... 198s Setting up r-bioc-genomicalignments (1.42.0-2) ... 198s Setting up r-bioc-shortread (1.64.0-3) ... 198s Setting up r-bioc-ioniser (2.30.0+dfsg-2) ... 198s Processing triggers for libc-bin (2.42-2ubuntu4) ... 198s Processing triggers for man-db (2.13.1-1build1) ... 199s Processing triggers for install-info (7.2-5) ... 200s autopkgtest [04:17:10]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 200s autopkgtest [04:17:10]: test pkg-r-autopkgtest: [----------------------- 200s Test: Try to load the R library IONiseR 201s 201s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 201s Copyright (C) 2025 The R Foundation for Statistical Computing 201s Platform: x86_64-pc-linux-gnu 201s 201s R is free software and comes with ABSOLUTELY NO WARRANTY. 201s You are welcome to redistribute it under certain conditions. 201s Type 'license()' or 'licence()' for distribution details. 201s 201s R is a collaborative project with many contributors. 201s Type 'contributors()' for more information and 201s 'citation()' on how to cite R or R packages in publications. 201s 201s Type 'demo()' for some demos, 'help()' for on-line help, or 201s 'help.start()' for an HTML browser interface to help. 201s Type 'q()' to quit R. 201s 201s > library('IONiseR') 206s > 206s Test: Run tests for IONiseR 206s Start: testthat.R 206s 206s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 206s Copyright (C) 2025 The R Foundation for Statistical Computing 206s Platform: x86_64-pc-linux-gnu 206s 206s R is free software and comes with ABSOLUTELY NO WARRANTY. 206s You are welcome to redistribute it under certain conditions. 206s Type 'license()' or 'licence()' for distribution details. 206s 206s R is a collaborative project with many contributors. 206s Type 'contributors()' for more information and 206s 'citation()' on how to cite R or R packages in publications. 206s 206s Type 'demo()' for some demos, 'help()' for on-line help, or 206s 'help.start()' for an HTML browser interface to help. 206s Type 'q()' to quit R. 206s 207s > library(testthat) 207s > library(IONiseR) 212s > 212s > test_check("IONiseR") 213s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 1 ] 213s > 213s autopkgtest [04:17:23]: test pkg-r-autopkgtest: -----------------------] 213s autopkgtest [04:17:23]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 213s pkg-r-autopkgtest PASS 213s autopkgtest [04:17:23]: @@@@@@@@@@@@@@@@@@@@ summary 213s pkg-r-autopkgtest PASS